View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20768_low_21 (Length: 269)
Name: NF20768_low_21
Description: NF20768
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20768_low_21 |
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Alignment Details
Target: chr8 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 15 - 257
Target Start/End: Original strand, 39163131 - 39163375
Alignment:
| Q |
15 |
ataaatgcattccaatatgaagttcccatgaaaaatgaaaatcaaagtccaaggttctttaaaaattgaggaattcagaatttcatactataagcaaatg |
114 |
Q |
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| T |
39163131 |
ataaatgcattccaatatgaagttcccatgaaaaatgaaaatcaaagtccaaggttctttaaaaattgaggaattcagaatttcatactataagcaaatg |
39163230 |
T |
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| Q |
115 |
atgatccaatattttgtatccaaaagggtcccgttaatctcttaactcaactgcatatgtttgactttctgtt--tgtgtgtgtttgaccaaagttttta |
212 |
Q |
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| T |
39163231 |
atgatccaatattttgtatccaaaagggtcccgttaatcacttaactcaactgcatatgtttgactttctgtttgtgtgtgtgtttgaccaaagttttta |
39163330 |
T |
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| Q |
213 |
aaaggaaaacccaagaacataatcaattaaaaattaatatagaat |
257 |
Q |
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| T |
39163331 |
aaaggaaagcccaagaacataatcaattaaaaattaatatagaat |
39163375 |
T |
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