View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2076_high_15 (Length: 239)
Name: NF2076_high_15
Description: NF2076
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2076_high_15 |
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Alignment Details
Target: chr5 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 17778557 - 17778336
Alignment:
| Q |
1 |
attttaggcacacaatttttaactatatatttcaacataaactaatcannnnnnnaaaaagatacttagaattagagggaatatcatgcaacctatggtg |
100 |
Q |
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| T |
17778557 |
attttaggcacacaatttttaactatatatttcaacataaactaatcattttcttaaaaagatacttagaattagatggaatatcatgcaacctatggtg |
17778458 |
T |
|
| Q |
101 |
acatcacatgagttacatttgactgtgattctccataatatcaaagatcgtaatgtgagtgcattgaaaattataactttgctaagataacaataaaatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
17778457 |
acatcacatgagttacatttgactgtgattctccataatatcaaggatcgtaatgtgagtgcattgaaaattataacttcgctaagataacaataaaatt |
17778358 |
T |
|
| Q |
201 |
tggattaggttttacttacatt |
222 |
Q |
| |
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|||||||||||||||| ||||| |
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| T |
17778357 |
tggattaggttttactcacatt |
17778336 |
T |
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