View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2076_low_10 (Length: 376)
Name: NF2076_low_10
Description: NF2076
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2076_low_10 |
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Alignment Details
Target: chr8 (Bit Score: 164; Significance: 1e-87; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 16 - 224
Target Start/End: Original strand, 13907998 - 13908208
Alignment:
| Q |
16 |
atatatgtgaacacttacatggcttaaacggatatgaagtggattaggtttgaagaatcacgaaatatgacaaaac--tggaagaaaattctatggtgca |
113 |
Q |
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| T |
13907998 |
atatatgtgaacagtgacatgacttaaacggatatgaagtggattagatttgaagaatcacgaaatatgacaaaacactggaagaaaattctagggtgta |
13908097 |
T |
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| Q |
114 |
gaaatttgtggtaagttaatgtgttttaagtttctaaagtcaaatgttttttaactgtatgttccttgatgtaatttgtgtgaatctgcagtgccctaac |
213 |
Q |
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| T |
13908098 |
gaaatttgtggtaagttaatgtgttttaagtttctaaagtcaaatgttttttgactgtatgttccttgatgtaatttgtgtgaatatgtagtgccctaac |
13908197 |
T |
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| Q |
214 |
attgaatgtga |
224 |
Q |
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| T |
13908198 |
attgaatgtga |
13908208 |
T |
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