View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20770_high_13 (Length: 252)
Name: NF20770_high_13
Description: NF20770
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20770_high_13 |
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Alignment Details
Target: chr8 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 9 - 236
Target Start/End: Complemental strand, 34796017 - 34795790
Alignment:
| Q |
9 |
gaagaaaatgcaaacgaaaccaaaatagagaagggagtgaatgagtattgaagcaccacttgtctgaaagtttccaaactccacacatcttgaccgtcca |
108 |
Q |
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| T |
34796017 |
gaagaaaatgcaaacgaaaccaaaatagagaagggagtgaatgagtattgaagcaccacttgtctgaaagtttccaaactccacacatcttgaccgtcca |
34795918 |
T |
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| Q |
109 |
ggtatttgaaacaataatcctggcgtcaacaaaacaaacagcactattgaaacaaacactggtccccagtccgacatgttttgtgtttctacgtgtaatt |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34795917 |
ggtatttgaaacaataatcctggcgtcaacaaaacaaacagcactattgaaacaaacactggtccccagtccgacatgttttgtgtttctacgtgtaatt |
34795818 |
T |
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| Q |
209 |
gttgtgtttactgtatagaaatggaaca |
236 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
34795817 |
gttgtgtttactgtatagaaatggaaca |
34795790 |
T |
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