View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20773_low_1 (Length: 412)

Name: NF20773_low_1
Description: NF20773
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20773_low_1
NF20773_low_1
[»] chr2 (7 HSPs)
chr2 (42-287)||(3933236-3933485)
chr2 (54-128)||(14428563-14428637)
chr2 (55-126)||(34962084-34962155)
chr2 (291-340)||(31469360-31469409)
chr2 (63-116)||(4767503-4767556)
chr2 (291-340)||(15570082-15570131)
chr2 (63-116)||(38551337-38551390)
[»] chr7 (6 HSPs)
chr7 (19-141)||(44215247-44215369)
chr7 (54-126)||(45343071-45343143)
chr7 (293-359)||(44215155-44215221)
chr7 (291-340)||(12962672-12962721)
chr7 (63-116)||(25796181-25796234)
chr7 (356-396)||(44215093-44215133)
[»] chr3 (10 HSPs)
chr3 (42-126)||(41845763-41845847)
chr3 (291-359)||(11765195-11765263)
chr3 (63-116)||(3701679-3701732)
chr3 (63-116)||(3705429-3705482)
chr3 (63-116)||(3707938-3707991)
chr3 (63-116)||(3712979-3713032)
chr3 (63-116)||(3719498-3719551)
chr3 (63-116)||(26807460-26807513)
chr3 (63-116)||(32775279-32775332)
chr3 (63-116)||(32814965-32815018)
[»] chr1 (5 HSPs)
chr1 (54-130)||(39755128-39755204)
chr1 (54-130)||(39760482-39760558)
chr1 (63-116)||(27981058-27981111)
chr1 (63-116)||(30953128-30953181)
chr1 (63-116)||(43849058-43849111)
[»] chr8 (6 HSPs)
chr8 (63-116)||(939445-939498)
chr8 (63-116)||(2105873-2105926)
chr8 (63-116)||(12289403-12289456)
chr8 (63-116)||(12483109-12483162)
chr8 (63-116)||(12670522-12670575)
chr8 (291-340)||(34909099-34909148)
[»] chr6 (1 HSPs)
chr6 (63-116)||(21882916-21882969)
[»] chr5 (4 HSPs)
chr5 (63-116)||(8219743-8219796)
chr5 (63-116)||(31965409-31965462)
chr5 (63-116)||(38322610-38322663)
chr5 (63-116)||(38327782-38327835)
[»] chr4 (5 HSPs)
chr4 (63-116)||(19186000-19186053)
chr4 (63-116)||(26741382-26741435)
chr4 (291-340)||(26885848-26885897)
chr4 (63-116)||(30161843-30161896)
chr4 (63-116)||(51386274-51386327)


Alignment Details
Target: chr2 (Bit Score: 143; Significance: 5e-75; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 42 - 287
Target Start/End: Original strand, 3933236 - 3933485
Alignment:
Q  42 attaataacattaagcgcatctggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccctggatgcgcattttttgtttcccac 141  Q
    |||| |||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| | ||| ||||    
T  3933236 attattaacattaagtgcatctggtgtagtggcatcatagtaccctcccacggtacggaccagggttcgattccctggatgtgcattttcttttttccac 3933335  T
Q  142 nnnnnnnacnnnnnnnttatgtaaggtttcgtttgatattatcgataatttgatttgatatttgttcaatttaatttaata----cttaatcttatgaga 237  Q
           ||       |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    |||||||||| ||||    
T  3933336 tttttttacaaaaaatttatgtaaggtttcgtttgatactattgataatttgatttgatatttgttcaatttaatttaataattgcttaatcttaggaga 3933435  T
Q  238 ttaaattgtttcattcctattcctataattttgaggtattactataaaat 287  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  3933436 ttaaattgtttcattcctattcctataattttgaggtactactataaaat 3933485  T

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Target: chr2; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 54 - 128
Target Start/End: Original strand, 14428563 - 14428637
Alignment:
Q  54 aagcgcatctggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccctggatgcgcatt 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14428563 aagcgcatctggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccctggatgcgcatt 14428637  T

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Target: chr2; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 34962084 - 34962155
Alignment:
Q  55 agcgcatctggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccctggatgcgca 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34962084 agcgcatctggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccctggatgcgca 34962155  T

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Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 291 - 340
Target Start/End: Complemental strand, 31469409 - 31469360
Alignment:
Q  291 ggggtttacgatgcacaaggaaaagatttgtgcaccatacagaagttgtg 340  Q
    ||||||||| |||||||||||||||||||||||||||| || ||||||||    
T  31469409 ggggtttacaatgcacaaggaaaagatttgtgcaccatgcaaaagttgtg 31469360  T

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Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 4767556 - 4767503
Alignment:
Q  63 tggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccc 116  Q
    |||| ||||||||  |||||||||| ||||||||| |||| |||||||||||||    
T  4767556 tggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattccc 4767503  T

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Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 340
Target Start/End: Original strand, 15570082 - 15570131
Alignment:
Q  291 ggggtttacgatgcacaaggaaaagatttgtgcaccatacagaagttgtg 340  Q
    ||||||||  |||||||||| ||||||||||||||||| || ||||||||    
T  15570082 ggggtttagcatgcacaagggaaagatttgtgcaccatgcataagttgtg 15570131  T

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Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 38551337 - 38551390
Alignment:
Q  63 tggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccc 116  Q
    |||| ||||||||  |||||||||| ||||||||| |||| |||||||||||||    
T  38551337 tggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattccc 38551390  T

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Target: chr7 (Bit Score: 83; Significance: 3e-39; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 19 - 141
Target Start/End: Complemental strand, 44215369 - 44215247
Alignment:
Q  19 acagagtactaaaatatttcatcattaataacattaagcgcatctggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccctg 118  Q
    |||||||| |||||||||||||||||| ||| |||||| |||||||||||||  ||||||||||||||| ||||||| ||||||||||||||||||||||    
T  44215369 acagagtattaaaatatttcatcattattaatattaagtgcatctggtgtagacgtatcatagtacccttccacggtgctgaccagggttcgattccctg 44215270  T
Q  119 gatgcgcattttttgtttcccac 141  Q
    |||||||||||| | ||||||||    
T  44215269 gatgcgcattttctttttcccac 44215247  T

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Target: chr7; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 45343143 - 45343071
Alignment:
Q  54 aagcgcatctggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccctggatgcgca 126  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45343143 aagcgcatctggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccctggatgcgca 45343071  T

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Target: chr7; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 293 - 359
Target Start/End: Complemental strand, 44215221 - 44215155
Alignment:
Q  293 ggtttacgatgcacaaggaaaagatttgtgcaccatacagaagttgtgtgaaaatgaccctaaatta 359  Q
    |||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||    
T  44215221 ggtttacgatgcacaaggaaaaaatttgtacaccatacaaaagttgtgtgaaaatgaccctaaatta 44215155  T

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Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 340
Target Start/End: Complemental strand, 12962721 - 12962672
Alignment:
Q  291 ggggtttacgatgcacaaggaaaagatttgtgcaccatacagaagttgtg 340  Q
    ||||||||  ||||| |||||||||||||||||||||| || ||||||||    
T  12962721 ggggtttagcatgcataaggaaaagatttgtgcaccatgcaaaagttgtg 12962672  T

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Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 25796181 - 25796234
Alignment:
Q  63 tggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccc 116  Q
    |||| ||||||||  |||||||||| ||||||||| |||| |||||||||||||    
T  25796181 tggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattccc 25796234  T

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Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 44215133 - 44215093
Alignment:
Q  356 attattttaatgctgacatttaagattcggagagagaaagg 396  Q
    |||||||||||||||||  |||||||| |||||||||||||    
T  44215133 attattttaatgctgaccgttaagatttggagagagaaagg 44215093  T

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Target: chr3 (Bit Score: 77; Significance: 1e-35; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 42 - 126
Target Start/End: Complemental strand, 41845847 - 41845763
Alignment:
Q  42 attaataacattaagcgcatctggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccctggatgcgca 126  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41845847 attaataacacaaagcgcatctggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccctggatgcgca 41845763  T

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Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 291 - 359
Target Start/End: Complemental strand, 11765263 - 11765195
Alignment:
Q  291 ggggtttacgatgcacaaggaaaagatttgtgcaccatacagaagttgtgtgaaaatgaccctaaatta 359  Q
    ||||||||| ||||| | |||||||||||||||||||| || ||||||||  |||||||||||||||||    
T  11765263 ggggtttacaatgcatacggaaaagatttgtgcaccatgcaaaagttgtgcaaaaatgaccctaaatta 11765195  T

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Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 3701679 - 3701732
Alignment:
Q  63 tggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccc 116  Q
    |||| ||||||||  |||||||||| ||||||||| |||| |||||||||||||    
T  3701679 tggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattccc 3701732  T

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Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 3705429 - 3705482
Alignment:
Q  63 tggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccc 116  Q
    |||| ||||||||  |||||||||| ||||||||| |||| |||||||||||||    
T  3705429 tggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattccc 3705482  T

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Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 3707938 - 3707991
Alignment:
Q  63 tggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccc 116  Q
    |||| ||||||||  |||||||||| ||||||||| |||| |||||||||||||    
T  3707938 tggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattccc 3707991  T

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Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 3712979 - 3713032
Alignment:
Q  63 tggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccc 116  Q
    |||| ||||||||  |||||||||| ||||||||| |||| |||||||||||||    
T  3712979 tggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattccc 3713032  T

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Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 3719498 - 3719551
Alignment:
Q  63 tggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccc 116  Q
    |||| ||||||||  |||||||||| ||||||||| |||| |||||||||||||    
T  3719498 tggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattccc 3719551  T

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Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 26807513 - 26807460
Alignment:
Q  63 tggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccc 116  Q
    |||| ||||||||  |||||||||| ||||||||| |||| |||||||||||||    
T  26807513 tggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattccc 26807460  T

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Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 32775279 - 32775332
Alignment:
Q  63 tggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccc 116  Q
    |||| ||||||||  |||||||||| ||||||||| |||| |||||||||||||    
T  32775279 tggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattccc 32775332  T

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Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 32814965 - 32815018
Alignment:
Q  63 tggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccc 116  Q
    |||| ||||||||  |||||||||| ||||||||| |||| |||||||||||||    
T  32814965 tggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattccc 32815018  T

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Target: chr1 (Bit Score: 77; Significance: 1e-35; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 54 - 130
Target Start/End: Original strand, 39755128 - 39755204
Alignment:
Q  54 aagcgcatctggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccctggatgcgcatttt 130  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39755128 aagcgcatctggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccctggatgcgcatttt 39755204  T

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Target: chr1; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 54 - 130
Target Start/End: Original strand, 39760482 - 39760558
Alignment:
Q  54 aagcgcatctggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccctggatgcgcatttt 130  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39760482 aagcgcatctggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccctggatgcgcatttt 39760558  T

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Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 27981058 - 27981111
Alignment:
Q  63 tggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccc 116  Q
    |||| ||||||||  |||||||||| ||||||||| |||| |||||||||||||    
T  27981058 tggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattccc 27981111  T

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Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 30953181 - 30953128
Alignment:
Q  63 tggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccc 116  Q
    |||| ||||||||  |||||||||| ||||||||| |||| |||||||||||||    
T  30953181 tggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattccc 30953128  T

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Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 43849111 - 43849058
Alignment:
Q  63 tggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccc 116  Q
    |||| ||||||||  |||||||||| ||||||||| |||| |||||||||||||    
T  43849111 tggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattccc 43849058  T

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Target: chr8 (Bit Score: 30; Significance: 0.0000001; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 939498 - 939445
Alignment:
Q  63 tggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccc 116  Q
    |||| ||||||||  |||||||||| ||||||||| |||| |||||||||||||    
T  939498 tggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattccc 939445  T

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Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 2105873 - 2105926
Alignment:
Q  63 tggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccc 116  Q
    |||| ||||||||  |||||||||| ||||||||| |||| |||||||||||||    
T  2105873 tggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattccc 2105926  T

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Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 12289403 - 12289456
Alignment:
Q  63 tggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccc 116  Q
    |||| ||||||||  |||||||||| ||||||||| |||| |||||||||||||    
T  12289403 tggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattccc 12289456  T

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Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 12483162 - 12483109
Alignment:
Q  63 tggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccc 116  Q
    |||| ||||||||  |||||||||| ||||||||| |||| |||||||||||||    
T  12483162 tggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattccc 12483109  T

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Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 12670575 - 12670522
Alignment:
Q  63 tggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccc 116  Q
    |||| ||||||||  |||||||||| ||||||||| |||| |||||||||||||    
T  12670575 tggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattccc 12670522  T

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Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 340
Target Start/End: Complemental strand, 34909148 - 34909099
Alignment:
Q  291 ggggtttacgatgcacaaggaaaagatttgtgcaccatacagaagttgtg 340  Q
    ||||||||  |||||||||| ||||||||||||||||| || ||||||||    
T  34909148 ggggtttagcatgcacaagggaaagatttgtgcaccatgcacaagttgtg 34909099  T

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Target: chr6 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 21882916 - 21882969
Alignment:
Q  63 tggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccc 116  Q
    |||| ||||||||  |||||||||| ||||||||| |||| |||||||||||||    
T  21882916 tggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattccc 21882969  T

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Target: chr5 (Bit Score: 30; Significance: 0.0000001; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 8219743 - 8219796
Alignment:
Q  63 tggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccc 116  Q
    |||| ||||||||  |||||||||| ||||||||| |||| |||||||||||||    
T  8219743 tggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattccc 8219796  T

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Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 31965462 - 31965409
Alignment:
Q  63 tggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccc 116  Q
    |||| ||||||||  |||||||||| ||||||||| |||| |||||||||||||    
T  31965462 tggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattccc 31965409  T

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Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 38322610 - 38322663
Alignment:
Q  63 tggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccc 116  Q
    |||| ||||||||  |||||||||| ||||||||| |||| |||||||||||||    
T  38322610 tggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattccc 38322663  T

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Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 38327782 - 38327835
Alignment:
Q  63 tggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccc 116  Q
    |||| ||||||||  |||||||||| ||||||||| |||| |||||||||||||    
T  38327782 tggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattccc 38327835  T

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Target: chr4 (Bit Score: 30; Significance: 0.0000001; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 19186000 - 19186053
Alignment:
Q  63 tggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccc 116  Q
    |||| ||||||||  |||||||||| ||||||||| |||| |||||||||||||    
T  19186000 tggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattccc 19186053  T

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Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 26741435 - 26741382
Alignment:
Q  63 tggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccc 116  Q
    |||| ||||||||  |||||||||| ||||||||| |||| |||||||||||||    
T  26741435 tggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattccc 26741382  T

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Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 340
Target Start/End: Original strand, 26885848 - 26885897
Alignment:
Q  291 ggggtttacgatgcacaaggaaaagatttgtgcaccatacagaagttgtg 340  Q
    ||||||||  |||||||||| ||||||||||||||||| || ||||||||    
T  26885848 ggggtttagcatgcacaagggaaagatttgtgcaccatgcacaagttgtg 26885897  T

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Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 30161843 - 30161896
Alignment:
Q  63 tggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccc 116  Q
    |||| ||||||||  |||||||||| ||||||||| |||| |||||||||||||    
T  30161843 tggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattccc 30161896  T

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Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 51386327 - 51386274
Alignment:
Q  63 tggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccc 116  Q
    |||| ||||||||  |||||||||| ||||||||| |||| |||||||||||||    
T  51386327 tggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattccc 51386274  T

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