View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20774_high_9 (Length: 251)
Name: NF20774_high_9
Description: NF20774
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20774_high_9 |
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Alignment Details
Target: chr3 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 11 - 233
Target Start/End: Original strand, 25171149 - 25171371
Alignment:
| Q |
11 |
cacagaccttggtgatgatgaaattgattcgttagagccttcatcaagtgattcttgccttataaccgacgtggtaggagtaggatcttcactatttgtt |
110 |
Q |
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| T |
25171149 |
cacagaccttggtgatgatgaaattgattcgttagagccttcatcaagtgattcttgccttataaccgacgtggtaggagtaggatcttcactatttgtt |
25171248 |
T |
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| Q |
111 |
gaattctgtgtgttacctagctctatggtttctgagttattcacattattgataacatgtgattgattaattgaattctctgacaggttgttcccctcct |
210 |
Q |
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| T |
25171249 |
gaattctctgtgttacctagctctatggtttctgagttattcacattattgataacatgtgattgattaattgaattctctgacaggttgttcccctcct |
25171348 |
T |
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| Q |
211 |
gttaaataatatagattgtaaat |
233 |
Q |
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|||||| |||||||||| ||||| |
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| T |
25171349 |
gttaaacaatatagattctaaat |
25171371 |
T |
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