View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20775_high_12 (Length: 535)

Name: NF20775_high_12
Description: NF20775
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20775_high_12
NF20775_high_12
[»] chr5 (49 HSPs)
chr5 (16-525)||(1350304-1350786)
chr5 (16-134)||(32841965-32842083)
chr5 (16-134)||(38871681-38871798)
chr5 (164-232)||(27212574-27212642)
chr5 (19-103)||(27212749-27212833)
chr5 (16-130)||(12847453-12847570)
chr5 (16-134)||(31221333-31221450)
chr5 (16-128)||(26093461-26093573)
chr5 (16-135)||(20891622-20891740)
chr5 (16-134)||(15799235-15799352)
chr5 (164-236)||(28445600-28445672)
chr5 (16-116)||(38692777-38692876)
chr5 (16-134)||(4064714-4064831)
chr5 (16-134)||(13908557-13908675)
chr5 (16-134)||(29862622-29862739)
chr5 (164-236)||(4064907-4064978)
chr5 (16-91)||(25747077-25747152)
chr5 (16-134)||(21070377-21070493)
chr5 (16-134)||(31929118-31929235)
chr5 (16-118)||(38372335-38372436)
chr5 (16-134)||(40613669-40613787)
chr5 (19-134)||(26095101-26095216)
chr5 (164-235)||(26318981-26319052)
chr5 (16-91)||(28083372-28083447)
chr5 (16-91)||(33487662-33487737)
chr5 (16-134)||(40619984-40620101)
chr5 (164-223)||(34529900-34529959)
chr5 (164-232)||(37095101-37095168)
chr5 (164-235)||(15957614-15957684)
chr5 (164-235)||(38640583-38640654)
chr5 (16-134)||(6156741-6156858)
chr5 (24-134)||(15957759-15957868)
chr5 (49-91)||(20023464-20023506)
chr5 (16-134)||(27158095-27158211)
chr5 (32-118)||(39524802-39524887)
chr5 (16-105)||(37183775-37183863)
chr5 (164-232)||(4649952-4650020)
chr5 (16-92)||(6800921-6800997)
chr5 (164-236)||(16428921-16428993)
chr5 (23-119)||(18514826-18514922)
chr5 (164-232)||(33487477-33487544)
chr5 (164-211)||(6156618-6156665)
chr5 (164-211)||(15799112-15799159)
chr5 (16-102)||(23269375-23269464)
chr5 (16-91)||(24203678-24203753)
chr5 (16-86)||(8738979-8739049)
chr5 (247-288)||(18810079-18810120)
chr5 (29-134)||(41253310-41253414)
chr5 (164-232)||(34440610-34440678)
[»] chr1 (38 HSPs)
chr1 (164-291)||(27794703-27794827)
chr1 (16-129)||(26723483-26723595)
chr1 (164-236)||(9446245-9446317)
chr1 (16-134)||(15069835-15069953)
chr1 (16-134)||(32817605-32817722)
chr1 (16-122)||(34006319-34006425)
chr1 (164-232)||(18583731-18583799)
chr1 (164-232)||(30829642-30829710)
chr1 (24-134)||(3561337-3561448)
chr1 (16-103)||(24472821-24472908)
chr1 (24-134)||(28866632-28866742)
chr1 (16-126)||(42546023-42546132)
chr1 (16-128)||(7011264-7011375)
chr1 (164-211)||(6223925-6223972)
chr1 (164-235)||(17000281-17000351)
chr1 (16-134)||(40650669-40650786)
chr1 (168-235)||(24471495-24471562)
chr1 (164-235)||(34162909-34162979)
chr1 (16-134)||(40907928-40908045)
chr1 (16-134)||(41584659-41584781)
chr1 (16-91)||(49677573-49677648)
chr1 (29-134)||(23442786-23442890)
chr1 (70-134)||(6223784-6223848)
chr1 (164-232)||(32542310-32542378)
chr1 (24-134)||(34162724-34162832)
chr1 (16-134)||(17000426-17000543)
chr1 (17-91)||(45046845-45046919)
chr1 (28-88)||(6099975-6100035)
chr1 (164-232)||(23442642-23442710)
chr1 (164-232)||(33611597-33611665)
chr1 (16-127)||(8704512-8704623)
chr1 (16-103)||(27794910-27794996)
chr1 (164-214)||(41584857-41584907)
chr1 (16-105)||(44573091-44573178)
chr1 (16-105)||(52744837-52744925)
chr1 (70-130)||(25563454-25563514)
chr1 (38-134)||(38885275-38885370)
chr1 (247-291)||(45568148-45568192)
[»] chr4 (46 HSPs)
chr4 (164-236)||(3703437-3703509)
chr4 (16-134)||(3703243-3703361)
chr4 (16-134)||(8106448-8106566)
chr4 (16-134)||(19835576-19835693)
chr4 (16-134)||(41323086-41323203)
chr4 (16-134)||(46440268-46440385)
chr4 (16-134)||(55052613-55052730)
chr4 (164-232)||(41413262-41413330)
chr4 (164-235)||(38536080-38536150)
chr4 (16-134)||(48319058-48319176)
chr4 (16-134)||(2506025-2506142)
chr4 (16-118)||(40703736-40703837)
chr4 (164-232)||(34972786-34972854)
chr4 (164-236)||(55052806-55052877)
chr4 (16-91)||(17933131-17933206)
chr4 (23-126)||(37222024-37222127)
chr4 (16-134)||(25491389-25491506)
chr4 (16-134)||(31582416-31582533)
chr4 (29-103)||(38416913-38416987)
chr4 (16-134)||(38536226-38536343)
chr4 (164-232)||(32441723-32441791)
chr4 (16-103)||(7863527-7863614)
chr4 (164-235)||(42660445-42660516)
chr4 (24-102)||(14474213-14474291)
chr4 (16-134)||(25752438-25752555)
chr4 (164-230)||(38416479-38416545)
chr4 (57-105)||(1788078-1788126)
chr4 (164-232)||(6228998-6229066)
chr4 (164-216)||(7863152-7863204)
chr4 (164-216)||(7863368-7863420)
chr4 (164-232)||(23523818-23523886)
chr4 (16-80)||(53894019-53894083)
chr4 (24-91)||(7931755-7931822)
chr4 (16-79)||(49002848-49002911)
chr4 (51-129)||(52077024-52077101)
chr4 (47-135)||(346190-346277)
chr4 (164-211)||(25539135-25539182)
chr4 (164-210)||(6003860-6003906)
chr4 (68-134)||(47456656-47456721)
chr4 (164-233)||(7817564-7817633)
chr4 (16-61)||(25538973-25539018)
chr4 (247-287)||(16024954-16024994)
chr4 (35-91)||(29822717-29822773)
chr4 (170-210)||(31582555-31582595)
chr4 (29-129)||(34972925-34973024)
chr4 (194-234)||(49003013-49003053)
[»] chr7 (38 HSPs)
chr7 (32-134)||(6467150-6467252)
chr7 (16-98)||(1518790-1518872)
chr7 (16-134)||(9151844-9151961)
chr7 (16-134)||(42925635-42925752)
chr7 (36-134)||(6467745-6467843)
chr7 (16-134)||(24042182-24042299)
chr7 (16-134)||(28230462-28230579)
chr7 (16-134)||(31985511-31985629)
chr7 (16-134)||(37518289-37518406)
chr7 (29-91)||(33151298-33151360)
chr7 (16-134)||(36468531-36468648)
chr7 (164-232)||(47202398-47202466)
chr7 (164-230)||(31985697-31985763)
chr7 (16-134)||(3936156-3936273)
chr7 (16-134)||(5278311-5278429)
chr7 (197-291)||(26555243-26555336)
chr7 (16-134)||(36946285-36946403)
chr7 (16-129)||(42865096-42865208)
chr7 (15-76)||(43185887-43185948)
chr7 (24-91)||(36408461-36408528)
chr7 (164-211)||(42925828-42925875)
chr7 (16-134)||(19225592-19225709)
chr7 (29-134)||(8154947-8155051)
chr7 (164-232)||(3304946-3305014)
chr7 (164-231)||(5731384-5731451)
chr7 (164-235)||(6467597-6467668)
chr7 (48-135)||(7115296-7115383)
chr7 (246-293)||(43744716-43744763)
chr7 (16-134)||(24690328-24690445)
chr7 (48-134)||(25613139-25613225)
chr7 (164-226)||(31642951-31643013)
chr7 (29-91)||(36629295-36629357)
chr7 (246-283)||(24686216-24686253)
chr7 (246-291)||(33952010-33952055)
chr7 (29-134)||(47202542-47202646)
chr7 (164-232)||(8214695-8214763)
chr7 (164-236)||(24042375-24042446)
chr7 (29-134)||(39581786-39581893)
[»] chr3 (51 HSPs)
chr3 (16-134)||(38977742-38977859)
chr3 (29-134)||(29048390-29048495)
chr3 (31-134)||(30721813-30721917)
chr3 (16-135)||(49096221-49096339)
chr3 (16-134)||(3902800-3902917)
chr3 (16-134)||(51258450-51258568)
chr3 (16-134)||(34821337-34821454)
chr3 (16-134)||(45712078-45712196)
chr3 (16-91)||(28873095-28873170)
chr3 (164-231)||(47301924-47301991)
chr3 (16-134)||(39149857-39149974)
chr3 (16-134)||(43420124-43420242)
chr3 (164-236)||(33700657-33700729)
chr3 (164-232)||(52777145-52777213)
chr3 (29-105)||(52777308-52777383)
chr3 (164-215)||(30721997-30722048)
chr3 (16-118)||(501135-501235)
chr3 (24-134)||(5127901-5128010)
chr3 (16-134)||(35142122-35142239)
chr3 (164-230)||(42936575-42936641)
chr3 (16-134)||(47980000-47980118)
chr3 (16-134)||(50716300-50716417)
chr3 (16-134)||(50796430-50796547)
chr3 (164-232)||(2358810-2358879)
chr3 (16-85)||(26053515-26053584)
chr3 (16-93)||(29035802-29035879)
chr3 (17-134)||(47739927-47740043)
chr3 (164-232)||(48303895-48303963)
chr3 (164-232)||(51258307-51258375)
chr3 (16-91)||(3352060-3352135)
chr3 (164-211)||(3902993-3903040)
chr3 (24-127)||(27143418-27143520)
chr3 (16-91)||(33438611-33438686)
chr3 (48-91)||(54229923-54229966)
chr3 (164-230)||(54230164-54230230)
chr3 (16-93)||(29035886-29035964)
chr3 (166-236)||(29048238-29048308)
chr3 (16-66)||(47123141-47123191)
chr3 (164-232)||(3937292-3937360)
chr3 (164-215)||(8735092-8735143)
chr3 (164-215)||(9087333-9087384)
chr3 (164-235)||(42937132-42937203)
chr3 (39-118)||(46622801-46622879)
chr3 (16-134)||(14828913-14829029)
chr3 (16-66)||(47130507-47130557)
chr3 (246-291)||(36401841-36401886)
chr3 (16-60)||(8735514-8735558)
chr3 (16-60)||(9087755-9087799)
chr3 (166-230)||(32024878-32024942)
chr3 (164-208)||(50716180-50716224)
chr3 (164-208)||(50796623-50796667)
[»] chr2 (24 HSPs)
chr2 (16-134)||(41203175-41203293)
chr2 (16-134)||(5507466-5507584)
chr2 (164-232)||(5507320-5507388)
chr2 (164-235)||(34517002-34517073)
chr2 (16-134)||(15995102-15995219)
chr2 (16-134)||(45153780-45153897)
chr2 (16-91)||(39447252-39447327)
chr2 (16-129)||(33452432-33452544)
chr2 (16-134)||(17474788-17474905)
chr2 (16-134)||(19110004-19110121)
chr2 (16-134)||(32187858-32187975)
chr2 (16-134)||(34517148-34517266)
chr2 (16-134)||(42894425-42894542)
chr2 (164-232)||(25715267-25715335)
chr2 (35-134)||(30763691-30763789)
chr2 (29-134)||(8388698-8388803)
chr2 (32-118)||(41854904-41854989)
chr2 (16-118)||(44465716-44465817)
chr2 (37-134)||(33833802-33833899)
chr2 (16-102)||(38066662-38066748)
chr2 (164-209)||(36949127-36949172)
chr2 (16-91)||(36875075-36875150)
chr2 (164-234)||(15995296-15995365)
chr2 (70-134)||(27900675-27900739)
[»] chr6 (25 HSPs)
chr6 (16-134)||(24604355-24604473)
chr6 (30-102)||(7734334-7734406)
chr6 (164-231)||(24604550-24604617)
chr6 (24-134)||(29289627-29289738)
chr6 (16-134)||(4508296-4508413)
chr6 (16-134)||(23406844-23406961)
chr6 (164-235)||(5638780-5638851)
chr6 (164-235)||(33413533-33413604)
chr6 (16-134)||(1945524-1945640)
chr6 (16-76)||(236899-236959)
chr6 (16-91)||(3717277-3717352)
chr6 (16-118)||(2539515-2539616)
chr6 (16-134)||(13801021-13801138)
chr6 (16-118)||(14587554-14587655)
chr6 (16-84)||(5699662-5699730)
chr6 (164-211)||(5699483-5699530)
chr6 (16-62)||(9905233-9905279)
chr6 (16-134)||(17264458-17264575)
chr6 (164-232)||(23406701-23406768)
chr6 (28-91)||(5638952-5639015)
chr6 (246-288)||(16396394-16396436)
chr6 (29-86)||(29519374-29519431)
chr6 (17-66)||(34528555-34528604)
chr6 (70-134)||(10310449-10310513)
chr6 (164-236)||(14038093-14038164)
[»] chr8 (27 HSPs)
chr8 (16-118)||(27927935-27928036)
chr8 (16-134)||(40994840-40994957)
chr8 (18-134)||(44106271-44106386)
chr8 (16-134)||(3094729-3094850)
chr8 (16-91)||(16310689-16310764)
chr8 (16-131)||(40392586-40392701)
chr8 (16-134)||(4259629-4259747)
chr8 (16-134)||(8885447-8885564)
chr8 (16-134)||(42280885-42281002)
chr8 (164-232)||(21004294-21004362)
chr8 (16-91)||(34853418-34853493)
chr8 (29-134)||(1076604-1076707)
chr8 (32-135)||(1373986-1374089)
chr8 (16-91)||(14164051-14164126)
chr8 (16-63)||(36980687-36980734)
chr8 (16-118)||(9073568-9073669)
chr8 (16-82)||(28916874-28916940)
chr8 (24-86)||(36165840-36165902)
chr8 (16-89)||(11698310-11698383)
chr8 (16-133)||(17119873-17119990)
chr8 (164-232)||(37248463-37248530)
chr8 (168-236)||(41530569-41530637)
chr8 (16-87)||(33472372-33472443)
chr8 (16-118)||(37248622-37248723)
chr8 (164-236)||(7971184-7971256)
chr8 (164-235)||(7981468-7981539)
chr8 (23-91)||(39093598-39093666)
[»] scaffold0137 (2 HSPs)
scaffold0137 (16-134)||(9491-9608)
scaffold0137 (164-211)||(9684-9731)
[»] scaffold0027 (1 HSPs)
scaffold0027 (16-134)||(141957-142074)
[»] scaffold0508 (1 HSPs)
scaffold0508 (16-134)||(3389-3506)
[»] scaffold0014 (1 HSPs)
scaffold0014 (28-93)||(100919-100984)
[»] scaffold0006 (1 HSPs)
scaffold0006 (16-81)||(59964-60029)


Alignment Details
Target: chr5 (Bit Score: 276; Significance: 1e-154; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 16 - 525
Target Start/End: Original strand, 1350304 - 1350786
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    |||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||    
T  1350304 aaaatggttatccatgttacaaacatgtttagaatttgtgttgatatagtttgaattatataatccgaactgtttttcccttgaaaaaagatgtttaggg 1350403  T
Q  116 ggtgttcggattatataatttgnnnnnnnnntcatgtaatgtgccctattttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaa 215  Q
    | ||||||||||||||||||||         |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1350404 g-tgttcggattatataatttggaaaaaaaatcatgtaatgcgccctattttcaccctataacaaaggaaaacaccagttcggattatgaaatccgaaaa 1350502  T
Q  216 tttcaagggcatttttggaagnnnnnnnnn-tagggtgcgcgaggaaatgaatagggtgagaaaagtaatagtcaaatataaattccttagcccacataa 314  Q
    ||||||||||||||||||||           ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||            
T  1350503 tttcaagggcatttttggaaaaaaaataaaatagggtgcgcgaggaaatgaataggatgagaaaagtaatagtcaaatataaattccttagc-------- 1350594  T
Q  315 accctaaccccgcatttcataacgaccttcactatcatcttcattcccgacctagcaatcaacacctctgcatttcataacgaccttcacccacttcaag 414  Q
                 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||   | | | || ||||||| |||| |||||    
T  1350595 -------------atttcataac-accttcactatcatcttcattcccgacctagcaatcaacacctctg---tccctcacaaccttcatccacgtcaag 1350677  T
Q  415 cccccagccttttgccgtcgacgacatagacaccagtttgcgtcactcactcactttctatcatcgccatgttctcagaactgtctcaaaacactaggca 514  Q
    |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1350678 ccc--agccttttgccgtcgacgacatagacaccagtttgcgtcactcactcactttctatcatcgccatgttctcagaactgtctcaaaacactaggca 1350775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 32841965 - 32842083
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||||||||||||||||| |||||||| ||||| | || ||||||||||||| |||||||||||| ||||||||| | | |||| ||    
T  32841965 aaaatgactatccatgttacaaacatgtttaaaatttgtgctgatacaattcgaattatataatccgaactgtttttcccttgaaaaagggtgtttatgg 32842064  T
Q  116 ggtgttcggattatataat 134  Q
    |||||||||||||| ||||    
T  32842065 ggtgttcggattatgtaat 32842083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 38871798 - 38871681
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||||||||||||||||| |||||||| ||||| |||| | ||||||||||| |||||||||| | ||||||||||||| ||||| |    
T  38871798 aaaatgactatccatgttacaaacatgtttagaatttgtgctgatacagttcggattatataatccgaactgttttac-cttgaaaaaagatgtttagag 38871700  T
Q  116 ggtgttcggattatataat 134  Q
    ||| |||||||||| ||||    
T  38871699 ggttttcggattatgtaat 38871681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 164 - 232
Target Start/End: Complemental strand, 27212642 - 27212574
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttg 232  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||    
T  27212642 ttttcaccctataacaaaggaaaacatcagttcggattatgaaatccgaaaatttcaaaggcatttttg 27212574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 27212833 - 27212749
Alignment:
Q  19 atgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaa 103  Q
    |||| |||||||||||||||||||||||||||||||  |||||||||| ||||||||||||| |||||||||||| ||| |||||    
T  27212833 atgactatctatgttacaaacatgtttataatttgtactgatatagttcgaattatataatccgaactgtttttcccttcaaaaa 27212749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 12847570 - 12847453
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagata---ttta 112  Q
    ||||||||||||||||||||||||||||| | |||||||| ||||| |||| | ||||| ||| | |||||||||||| |||||||||| |||   ||||    
T  12847570 aaaatgattatctatgttacaaacatgttcagaatttgtgctgatacagttcggattatttaaaccgaactgtttttcacttgaaaaaaaatagtgttta 12847471  T
Q  113 gggggtgttcggattata 130  Q
    ||| ||||||||||||||    
T  12847470 gggtgtgttcggattata 12847453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 31221333 - 31221450
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| ||||||||||||||||||||||||||| ||||| |||||| ||||||||||| |||||||||| | ||||||||| | | ||||| |    
T  31221333 aaaatgactatccatgttacaaacatgtttataatttgtgctgatacagtttggattatataatccgaactgttttac-cttgaaaaagggtgtttagag 31221431  T
Q  116 ggtgttcggattatataat 134  Q
    ||| | |||||||| ||||    
T  31221432 ggtttccggattatgtaat 31221450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 26093573 - 26093461
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||||| ||||||||| ||||||| || |||||||||| | ||||||||||||||||| ||||||  |||||||| | | |||||||    
T  26093573 aaaatgactatccatgttagaaacatgttcataatttatgctgatatagttaggattatataatctgaactatttttccattgaaaaatggtgtttaggg 26093474  T
Q  116 ggtgttcggatta 128  Q
    | |||||||||||    
T  26093473 gatgttcggatta 26093461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 20891740 - 20891622
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||||||||||||||||| |||||||| ||||| ||||   ||||||||||| |||||||||| | ||||||||| | | |||||||    
T  20891740 aaaatgactatccatgttacaaacatgtttagaatttgtgctgatacagttcagattatataatccgaactgttttac-cttgaaaaagggtgtttaggg 20891642  T
Q  116 ggtgttcggattatataatt 135  Q
    ||| |||||||||| |||||    
T  20891641 ggttttcggattatgtaatt 20891622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 15799352 - 15799235
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||||||||||||||||| |||||||| ||||| |||| | ||||||||||||||| |||||| |  |||||||| | | |||||||    
T  15799352 aaaatgactatccatgttacaaacatgtttagaatttgtgctgatacagttcggattatataatctgaaatgttttac-gttgaaaaagggtgtttaggg 15799254  T
Q  116 ggtgttcggattatataat 134  Q
    ||| |||||||||| ||||    
T  15799253 ggttttcggattatgtaat 15799235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 28445600 - 28445672
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttggaag 236  Q
    |||||||| ||||||||||||||||| ||||||||||| | |||||||||||| |||||| ||||||||||||    
T  28445600 ttttcaccttataacaaaggaaaacattagttcggattttaaaatccgaaaatctcaaggacatttttggaag 28445672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 16 - 116
Target Start/End: Original strand, 38692777 - 38692876
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    |||||||||||| |||||||||||||||||| |||||||| ||||| |||| | ||||||||||| |||||||||| | ||||||||| | | |||||||    
T  38692777 aaaatgattatccatgttacaaacatgtttagaatttgtgctgatacagttcggattatataatccgaactgttttac-cttgaaaaagggtgtttaggg 38692875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 4064714 - 4064831
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||||||||||||||||| |||||||| ||||| |||| | ||||||||||  |||||||||| | ||||||||| | | |||||||    
T  4064714 aaaatgactatccatgttacaaacatgtttagaatttgtgctgataaagttcggattatataattcgaactgttttac-cttgaaaaagggtgtttaggg 4064812  T
Q  116 ggtgttcggattatataat 134  Q
    ||| | |||||||| ||||    
T  4064813 ggtttccggattatgtaat 4064831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 13908675 - 13908557
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| ||||  ||||||||||||||||| ||||| |||||||| | || | ||||||||||| |||||||||||| |||||||||   | ||||||     
T  13908675 aaaatgactatccgtgttacaaacatgtttaaaatttatgttgatacaattcggattatataatccgaactgtttttcccttgaaaaagagtgtttagga 13908576  T
Q  116 ggtgttcggattatataat 134  Q
    |||||||  ||||||||||    
T  13908575 ggtgttcaaattatataat 13908557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 29862739 - 29862622
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||||||||||||||||| |||||||| ||||| |||| | ||||||||||  |||||||||| | ||||||||| | | |||||||    
T  29862739 aaaatgactatccatgttacaaacatgtttagaatttgtgctgatacagttcggattatataattcgaactgttttac-cttgaaaaatggtgtttaggg 29862641  T
Q  116 ggtgttcggattatataat 134  Q
    ||| | |||||||| ||||    
T  29862640 ggtttccggattatgtaat 29862622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 4064907 - 4064978
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttggaag 236  Q
    ||||||||||||||||||||||||||| | | |||||||||||||||| |||  |||||||||||||||||||    
T  4064907 ttttcaccctataacaaaggaaaacaccattccggattatgaaatccggaaa-ctcaagggcatttttggaag 4064978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 25747152 - 25747077
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttt 91  Q
    ||||||| |||| |||||||||||||||||| |||||||| ||||| |||| | ||||||||||| ||||||||||    
T  25747152 aaaatgactatccatgttacaaacatgtttagaatttgtgctgatacagttcggattatataatccgaactgtttt 25747077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 21070493 - 21070377
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| ||||||||||||||| ||||| | |||||||  ||||  |||||| ||||||||||||||| | ||||| |||| ||||| ||| |||| ||    
T  21070493 aaaatgactatctatgttacaaatatgttcagaatttgtactgattcagtttggattatataatctgaattattttt-tcttaaaaaatgatgttta-gg 21070396  T
Q  116 ggtgttcggattatataat 134  Q
    |||||||||||| ||||||    
T  21070395 ggtgttcggattctataat 21070377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 31929118 - 31929235
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||||||||||||||||| |||||||| ||||| ||||   ||||||||||| |||||||||| | ||||||||  | | |||||||    
T  31929118 aaaatgactatccatgttacaaacatgtttaaaatttgtgctgatacagttcagattatataatccgaactgttttac-cttgaaaaggggtgtttaggg 31929216  T
Q  116 ggtgttcggattatataat 134  Q
    ||| | |||||||| ||||    
T  31929217 ggtttccggattatgtaat 31929235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 38372436 - 38372335
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||| ||||||||||||| |||||||| | ||| |||| | |||||||||||||||||||||| | ||||||||| | |||||| ||    
T  38372436 aaaatgactatccatgtaacaaacatgtttagaatttgtgctaatacagttcggattatataatctgaactgttttac-cttgaaaaagggtatttaagg 38372338  T
Q  116 ggt 118  Q
    |||    
T  38372337 ggt 38372335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 40613669 - 40613787
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||| |||||| |||||||||||||||| ||||||| || | ||| |||| | ||||||||||| |||||||||||| ||| ||||| | | |||| ||    
T  40613669 aaaataattatccatgttacaaacatgttcataatttttgctcatacagttcggattatataatccgaactgtttttcccttaaaaaatggtgtttatgg 40613768  T
Q  116 ggtgttcggattatataat 134  Q
    | |||||| ||| ||||||    
T  40613769 gatgttcgaattctataat 40613787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 134
Target Start/End: Complemental strand, 26095216 - 26095101
Alignment:
Q  19 atgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttagggggt 118  Q
    |||| |||| |||||||||||||||||| ||||| |||||||| | ||   ||||||||||| ||||| ||||||  ||||||||   | |||| |||||    
T  26095216 atgactatccatgttacaaacatgtttagaatttatgttgatacaattcagattatataatccgaactatttttcctttgaaaaagagtgtttatggggt 26095117  T
Q  119 gttcggattatataat 134  Q
    ||||||||||| ||||    
T  26095116 gttcggattatgtaat 26095101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 26319052 - 26318981
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttggaa 235  Q
    ||||||||||||||||||||||||||| | | || ||||||||||||| |||   |||||||||||||||||    
T  26319052 ttttcaccctataacaaaggaaaacaccattccgaattatgaaatccggaaaccgcaagggcatttttggaa 26318981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 28083372 - 28083447
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttt 91  Q
    ||||||| |||| |||||||||| |||||||||||||||| ||||| |||| | ||||||||||| | ||||||||    
T  28083372 aaaatgactatccatgttacaaatatgtttataatttgtgctgatacagttcggattatataatccggactgtttt 28083447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 33487737 - 33487662
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttt 91  Q
    ||||||| |||| ||||||||||||| |||| |||||||| ||||| |||| | ||||||||||| ||||||||||    
T  33487737 aaaatgactatccatgttacaaacatttttagaatttgtgctgatacagttcggattatataatccgaactgtttt 33487662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 40619984 - 40620101
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||||| || ||||||||| |||||||| |||||||  ||||| | || | ||||||||||||||| | |||| | ||||||||| ||| |||||||    
T  40619984 aaaatgattgtccatgttacaagcatgtttagaatttgtactgatacaattcggattatataatctgaaatattttac-cttgaaaaatgatgtttaggg 40620082  T
Q  116 ggtgttcggattatataat 134  Q
    ||| | |||||||| ||||    
T  40620083 ggtttccggattatgtaat 40620101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 223
Target Start/End: Complemental strand, 34529959 - 34529900
Alignment:
Q  164 ttttcaccctataacaaaggaaaacacta-gttcggattatgaaatccgaaaatttcaagg 223  Q
    |||||| ||||||||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  34529959 ttttcatcctataacaaaggaaaa-actaagttcggattatgaaatccaaaaatttcaagg 34529900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 232
Target Start/End: Original strand, 37095101 - 37095168
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttg 232  Q
    ||||||||||||||||||||||| ||| | | ||||||||||||| ||||||  |||||||||||||||    
T  37095101 ttttcaccctataacaaaggaaa-caccattccggattatgaaattcgaaaacctcaagggcatttttg 37095168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 15957684 - 15957614
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttggaa 235  Q
    |||||||||| ||||||| |||||||| | |||||||||| |||||||||||  |||| |||||||||||||    
T  15957684 ttttcaccctttaacaaaagaaaacaccatttcggattataaaatccgaaaa-ctcaaaggcatttttggaa 15957614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 38640654 - 38640583
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttggaa 235  Q
    |||||||||| |||||||||||||||| | | | |||||| ||||||| ||| |||||||||||| ||||||    
T  38640654 ttttcaccctttaacaaaggaaaacaccattccagattataaaatccggaaacttcaagggcattattggaa 38640583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 6156858 - 6156741
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||||||||||||||||| ||||| || ||||| | || | ||||||||||| |||| ||||| | ||||||| | | | |||||||    
T  6156858 aaaatgactatccatgttacaaacatgtttagaatttatgctgatacaattcgtattatataatccgaacggttttac-cttgaaagagggtgtttaggg 6156760  T
Q  116 ggtgttcggattatataat 134  Q
    ||| | |||||||| ||||    
T  6156759 ggtttccggattatgtaat 6156741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 134
Target Start/End: Complemental strand, 15957868 - 15957759
Alignment:
Q  24 tatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttagggggtgttcg 123  Q
    ||||||||||||||||||||||| |||||||  ||||| ||||   |||||||||||  ||||||||| | ||||||||  | | |||||||||| | ||    
T  15957868 tatctatgttacaaacatgtttagaatttgtactgatacagttcagattatataatccaaactgttttac-cttgaaaatgggtgtttagggggtttccg 15957770  T
Q  124 gattatataat 134  Q
    |||||| ||||    
T  15957769 gattatttaat 15957759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 91
Target Start/End: Original strand, 20023464 - 20023506
Alignment:
Q  49 atttgtgttgatatagtttgaattatataatctgaactgtttt 91  Q
    ||||||||| ||||||||||||||||||||| |||||||||||    
T  20023464 atttgtgttaatatagtttgaattatataatttgaactgtttt 20023506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 27158211 - 27158095
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| ||||| |||||||||| |||||||||| ||||| ||||   ||||||||||| | ||||||||| ||||| |||| | | | || ||    
T  27158211 aaaatgactatccatgtttcaaacatgttcataatttgtgctgatacagttcagattatataatccg-actgttttt-tcttgtaaaatggtgtctatgg 27158114  T
Q  116 ggtgttcggattatataat 134  Q
    |||||||||||| ||||||    
T  27158113 ggtgttcggattctataat 27158095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 39524887 - 39524802
Alignment:
Q  32 ttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttagggggt 118  Q
    ||||||| ||||||| |||||||| ||||| |||| | ||||||||||| |||||||||| | ||||||||| | | ||||||||||    
T  39524887 ttacaaatatgtttagaatttgtgatgatacagttcggattatataatccgaactgttttac-cttgaaaaagggtgtttagggggt 39524802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 37183775 - 37183863
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaag 105  Q
    ||||||| |||| ||||||||||||| |||| |||||||||||||| ||||   |||||||||||   |||||||| | |||||||||||    
T  37183775 aaaatgactatccatgttacaaacatatttagaatttgtgttgatacagttcagattatataatccagactgttttgc-cttgaaaaaag 37183863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 232
Target Start/End: Complemental strand, 4650020 - 4649952
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttg 232  Q
    ||||||||||||||||||||||||||| | |||| ||| | ||||| |||||| |||||  ||||||||    
T  4650020 ttttcaccctataacaaaggaaaacaccaattcgaattttaaaatctgaaaatctcaagaacatttttg 4649952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 6800921 - 6800997
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgttttt 92  Q
    ||||||| | || ||||| |||||||||| ||||||| || ||||| ||||  ||||||||||| ||||||||||||    
T  6800921 aaaatgactgtccatgttgcaaacatgttcataatttatgctgatacagttcaaattatataatttgaactgttttt 6800997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 16428993 - 16428921
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttggaag 236  Q
    |||||||||||||| |||||||||||| | |||||||| | || |  |||||| |||||| ||||||||||||    
T  16428993 ttttcaccctataataaaggaaaacaccatttcggattttaaactttgaaaatctcaaggacatttttggaag 16428921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 119
Target Start/End: Complemental strand, 18514922 - 18514826
Alignment:
Q  23 ttatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttagggggtg 119  Q
    |||||||||||||||||||  ||| |||||||| ||||   |||   |||||||||||||||||||||||| | |||| || | | |||||||||||    
T  18514922 ttatctatgttacaaacatacttagaatttgtgatgatgcggttcagattatataatctgaactgtttttcccctgaataagggtgtttagggggtg 18514826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 232
Target Start/End: Complemental strand, 33487544 - 33487477
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttg 232  Q
    |||||||||| |||||||||||||||| | | |||||||||||||||| |||  |||||| ||||||||    
T  33487544 ttttcaccctgtaacaaaggaaaacaccattccggattatgaaatccggaaa-ctcaaggacatttttg 33487477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 6156665 - 6156618
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccg 211  Q
    |||||||| |||||||||||||||||| | | ||||||||||||||||    
T  6156665 ttttcaccatataacaaaggaaaacaccattccggattatgaaatccg 6156618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 15799159 - 15799112
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccg 211  Q
    |||||||||||||||||||||||| || | | ||||||||||||||||    
T  15799159 ttttcaccctataacaaaggaaaataccattccggattatgaaatccg 15799112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 23269464 - 23269375
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgat---atagtttgaattatataatctgaactgtttttctcttgaaaa 102  Q
    ||||||||| |  |||||||||||||||| | || ||||| ||||   | |||| | |||||||||||||||||||||||| ||||||||    
T  23269464 aaaatgattgttcatgttacaaacatgttcagaagttgtgatgatgataaagttcggattatataatctgaactgtttttcccttgaaaa 23269375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 24203678 - 24203753
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttt 91  Q
    ||||||||||||   |||||||||||||||| ||||| || ||||| |||| | ||||||||| | ||||||||||    
T  24203678 aaaatgattatcccagttacaaacatgtttagaatttatgctgatacagttcggattatataacccgaactgtttt 24203753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 8738979 - 8739049
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaact 86  Q
    ||||||| |||| |||||||||||||||| | |||| ||||||||  |||||| ||||| ||||| |||||    
T  8738979 aaaatgactatccatgttacaaacatgttcagaattggtgttgatgcagtttggattatgtaatccgaact 8739049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 288
Target Start/End: Original strand, 18810079 - 18810120
Alignment:
Q  247 agggtgcgcgaggaaatgaatagggtgagaaaagtaatagtc 288  Q
    |||| ||||||||||||| |||||||| ||||||||||||||    
T  18810079 agggcgcgcgaggaaatgcatagggtgggaaaagtaatagtc 18810120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 134
Target Start/End: Complemental strand, 41253414 - 41253310
Alignment:
Q  29 atgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttagggggtgttcggatta 128  Q
    |||||||||||| ||| |||||| ||| || || |||| ||||||||||||| ||| | ||||| || | ||||| | | ||||||||||||| |||||     
T  41253414 atgttacaaacaagttcataattggtgctggtacagttcgaattatataatccgaattattttt-tccttaaaaatggtgtttagggggtgtttggattc 41253316  T
Q  129 tataat 134  Q
    ||||||    
T  41253315 tataat 41253310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 164 - 232
Target Start/End: Complemental strand, 34440678 - 34440610
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttg 232  Q
    |||| |||||||||||||||||||||  | ||| ||||||||||| || |||  |||||||| ||||||    
T  34440678 tttttaccctataacaaaggaaaacatcatttcagattatgaaattcggaaacctcaagggcgtttttg 34440610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 1e-30; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 164 - 291
Target Start/End: Complemental strand, 27794827 - 27794703
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttggaagnnnnnnnnntagggtgcgcgaggaaat 263  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||          || || ||||||||||||    
T  27794827 ttttcaccctataacaaaggaaaacaccagttcggattatgaaatccgaaaatttcaagggcatttttgaaa---aaaataataaggcgcgcgaggaaat 27794731  T
Q  264 gaatagggtgagaaaagtaatagtcaaa 291  Q
    |||||||||| | |||||||||||||||    
T  27794730 gaatagggtgggtaaagtaatagtcaaa 27794703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 26723483 - 26723595
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||||||||||||||||  |||||||| |||||||||| | ||||||||||| |||| ||||||| ||| ||||| | | |||||||    
T  26723483 aaaatgactatc-atgttacaaacatgttttaaatttgtgctgatatagttcggattatataatccgaaccgtttttcccttaaaaaagggtgtttaggg 26723581  T
Q  116 ggtgttcggattat 129  Q
    ||||||||||||||    
T  26723582 ggtgttcggattat 26723595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 9446245 - 9446317
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttggaag 236  Q
    |||||||||||| |||||||||||||| |||||||||| | |||||||||||| |||||||||||||||||||    
T  9446245 ttttcaccctattacaaaggaaaacacaagttcggattttaaaatccgaaaatctcaagggcatttttggaag 9446317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 15069835 - 15069953
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatattta-gg 114  Q
    ||||||| |||| |||||||||||||||||| |||||||| ||||| |||| | |||||||||||||||||| |||| |||||||||| | | |||| ||    
T  15069835 aaaatgactatccatgttacaaacatgtttaaaatttgtgctgatacagttcggattatataatctgaactg-ttttatcttgaaaaatggtgtttaggg 15069933  T
Q  115 gggtgttcggattatataat 134  Q
    |||| | |||||||||||||    
T  15069934 gggtttccggattatataat 15069953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 32817605 - 32817722
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| ||||||||||||||||||  ||||||| ||||| |||| | ||||||||||| |||||||||| | ||||||||| | | |||||||    
T  32817605 aaaatgactatccatgttacaaacatgtttaggatttgtgctgatacagttcggattatataatccgaactgttttac-cttgaaaaagggtgtttaggg 32817703  T
Q  116 ggtgttcggattatataat 134  Q
    ||| |||||||||| ||||    
T  32817704 ggttttcggattatgtaat 32817722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 16 - 122
Target Start/End: Complemental strand, 34006425 - 34006319
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| ||||||||||||| |||| |||||||| | ||| | |||| |||||||||||||||||||||||| ||||||||| | | |||| ||    
T  34006425 aaaatgactatccatgttacaaacatctttaaaatttgtgctaatacaatttggattatataatctgaactgtttttcccttgaaaaagggtgtttatgg 34006326  T
Q  116 ggtgttc 122  Q
    |||||||    
T  34006325 ggtgttc 34006319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 164 - 232
Target Start/End: Original strand, 18583731 - 18583799
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttg 232  Q
    ||||||||||||||||||||||||||| | | ||||||||||||||||||||  |||||||||||||||    
T  18583731 ttttcaccctataacaaaggaaaacaccattccggattatgaaatccgaaaacctcaagggcatttttg 18583799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 164 - 232
Target Start/End: Original strand, 30829642 - 30829710
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttg 232  Q
    ||||||||||||||||||||||||||| | | |||||||||||||||| ||| ||||||||||||||||    
T  30829642 ttttcaccctataacaaaggaaaacaccattccggattatgaaatccggaaacttcaagggcatttttg 30829710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 24 - 134
Target Start/End: Original strand, 3561337 - 3561448
Alignment:
Q  24 tatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttagg-gggtgttc 122  Q
    ||||||||||||||||||||| |||||||||| ||||| |||| | ||||||||||  |||| ||||||| ||||||||| | | |||||| ||||||||    
T  3561337 tatctatgttacaaacatgttcataatttgtgctgatacagttcggattatataattcgaaccgtttttcccttgaaaaagggtgtttaggagggtgttc 3561436  T
Q  123 ggattatataat 134  Q
     |||| ||||||    
T  3561437 agattctataat 3561448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 24472821 - 24472908
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaa 103  Q
    ||||||| |||| |||||||||||||||||| |||||||| | |||||||| | ||||||||||| ||| |||||||| |||||||||    
T  24472821 aaaatgactatccatgttacaaacatgtttaaaatttgtgctaatatagttcggattatataatccgaattgtttttcccttgaaaaa 24472908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 24 - 134
Target Start/End: Original strand, 28866632 - 28866742
Alignment:
Q  24 tatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttagggggtgttcg 123  Q
    |||| |||||||||||||||||| |||||||| ||||| ||||   ||||||||||| |||||||||||| ||| ||||| | | ||||| ||||||||     
T  28866632 tatccatgttacaaacatgtttaaaatttgtgctgatacagttcagattatataatccgaactgtttttccctttaaaaagggtgtttagcgggtgttca 28866731  T
Q  124 gattatataat 134  Q
    |||||| ||||    
T  28866732 gattatgtaat 28866742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 42546132 - 42546023
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||||||||||||||||| |||||||| ||||| |||| | ||||||||||| |||||||||| | ||||||||| | |  ||||||    
T  42546132 aaaatgactatccatgttacaaacatgtttagaatttgtgctgatacagttcggattatataatccgaactgttttac-cttgaaaaagggtgcttaggg 42546034  T
Q  116 ggtgttcggat 126  Q
    ||| |||||||    
T  42546033 ggttttcggat 42546023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 7011375 - 7011264
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||||| ||||||||||| ||||| || ||||| |||| | ||||||||||| ||||| |||| | ||||||||| ||| |||||||    
T  7011375 aaaatgactatccatgttagaaacatgtttagaatttttgctgatacagttcggattatataatccgaactattttac-cttgaaaaatgatgtttaggg 7011277  T
Q  116 ggtgttcggatta 128  Q
    ||| |||||||||    
T  7011276 ggttttcggatta 7011264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 6223925 - 6223972
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccg 211  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  6223925 ttttcaccctataacaaaggaaaacacgagttcggattatgaaatccg 6223972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 17000351 - 17000281
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttggaa 235  Q
    ||||||||||||||||||||||||||| | |  |||||||||||||||||||  ||||||||||||||||||    
T  17000351 ttttcaccctataacaaaggaaaacaccattctggattatgaaatccgaaaa-ctcaagggcatttttggaa 17000281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 40650669 - 40650786
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    |||||||||||| |||||||||||||| |||||||||||| ||||| ||||   || |||||||| |||||||||| | ||||||||| | | |||| ||    
T  40650669 aaaatgattatccatgttacaaacatggttataatttgtgctgatacagttcagatcatataatccgaactgttttac-cttgaaaaatggtgtttaagg 40650767  T
Q  116 ggtgttcggattatataat 134  Q
    ||| | |||||||| ||||    
T  40650768 ggtttccggattatgtaat 40650786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 168 - 235
Target Start/End: Original strand, 24471495 - 24471562
Alignment:
Q  168 caccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttggaa 235  Q
    ||||||||||||||||||||||| | | |||||||||||||||| |||  |||||| |||||||||||    
T  24471495 caccctataacaaaggaaaacaccattccggattatgaaatccggaaacctcaaggacatttttggaa 24471562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 34162909 - 34162979
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttggaa 235  Q
    ||||||||||||||||||||||||||| | | |||||||||||||||| |||  ||||||| ||||||||||    
T  34162909 ttttcaccctataacaaaggaaaacaccattccggattatgaaatccggaaa-ctcaagggtatttttggaa 34162979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 40907928 - 40908045
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaa-gatatttagg 114  Q
    |||||||||||| |||||||||||||||||| |||||||| ||||| || || |  ||||||||| |||||||||| | ||| |||||| | | ||||||    
T  40907928 aaaatgattatccatgttacaaacatgtttagaatttgtgctgatacag-ttcagatatataatccgaactgttttac-cttaaaaaaagggtgtttagg 40908025  T
Q  115 gggtgttcggattatataat 134  Q
    |||| |||||||||| ||||    
T  40908026 gggttttcggattatgtaat 40908045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 41584659 - 41584781
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagt-----ttgaattatataatctgaactgtttttctcttgaaaaaagatatt 110  Q
    ||||||| |||| |||||||||||||||||| |||||||| ||||| |||     ||| ||||||||||| |||||| ||| | ||||||||| ||| ||    
T  41584659 aaaatgactatccatgttacaaacatgtttagaatttgtgctgatacagttcggattggattatataatccgaactgatttac-cttgaaaaaggatgtt 41584757  T
Q  111 tagggggtgttcggattatataat 134  Q
    |||||||| | |||||||| ||||    
T  41584758 tagggggtttccggattatgtaat 41584781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 49677648 - 49677573
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttt 91  Q
    ||||||| ||||||||||||||||||| ||| ||||| || ||||| |||| | ||||||||||| ||||||||||    
T  49677648 aaaatgactatctatgttacaaacatggttagaatttatgctgatacagttcggattatataatccgaactgtttt 49677573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 134
Target Start/End: Complemental strand, 23442890 - 23442786
Alignment:
Q  29 atgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttagggggtgttcggatta 128  Q
    |||||||||| |||||||  ||||||| ||||| |||||| ||||||||||| ||||| |||| | ||| ||||||||| ||| |||||| | || ||||    
T  23442890 atgttacaaatatgtttaggatttgtgctgatacagtttggattatataatccgaactattttac-cttaaaaaaagatgtttggggggtttccgaatta 23442792  T
Q  129 tataat 134  Q
    ||||||    
T  23442791 tataat 23442786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 70 - 134
Target Start/End: Original strand, 6223784 - 6223848
Alignment:
Q  70 attatataatctgaactgtttttctcttgaaaaaagatatttagggggtgttcggattatataat 134  Q
    ||||||||||| |||||||||||  ||||||||| ||| |||| |||||||||||||||| ||||    
T  6223784 attatataatccgaactgtttttaccttgaaaaaggatgtttatggggtgttcggattatgtaat 6223848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 232
Target Start/End: Complemental strand, 32542378 - 32542310
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttg 232  Q
    ||||||||||| ||||||||||||||| | | |||||||||||||||| |||  |||| ||||||||||    
T  32542378 ttttcaccctacaacaaaggaaaacaccattccggattatgaaatccggaaacctcaatggcatttttg 32542310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 134
Target Start/End: Original strand, 34162724 - 34162832
Alignment:
Q  24 tatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttagggggtgttcg 123  Q
    |||| |||||||||||||||||| |||||||| ||||| |||| | ||||||||||  ||||||  |||  ||||||||| | | |||||||||| | ||    
T  34162724 tatccatgttacaaacatgtttagaatttgtgctgatacagttcggattatataattcgaactg--tttaccttgaaaaagggtgtttagggggtttccg 34162821  T
Q  124 gattatataat 134  Q
    |||||| ||||    
T  34162822 gattatgtaat 34162832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 17000543 - 17000426
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||||||||||||||||| |||||||| ||||| || |   ||||||||||   ||||||||| | ||||||||| | | |||||||    
T  17000543 aaaatgactatccatgttacaaacatgtttagaatttgtgctgatacagctcagattatataattcaaactgttttac-cttgaaaaatggtgtttaggg 17000445  T
Q  116 ggtgttcggattatataat 134  Q
    ||| | |||||||| ||||    
T  17000444 ggtttccggattatgtaat 17000426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 45046845 - 45046919
Alignment:
Q  17 aaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttt 91  Q
    |||||| |||| |||||||||||||||||| |||||||| ||||| |||| | |||||| |||| ||||| ||||    
T  45046845 aaatgactatccatgttacaaacatgtttagaatttgtgctgatacagttcggattatacaatccgaactatttt 45046919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 6099975 - 6100035
Alignment:
Q  28 tatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgt 88  Q
    |||||||||| ||| |||| |||||||||||||| | |||| |||||||||| ||||||||    
T  6099975 tatgttacaagcatatttaaaatttgtgttgatacaatttggattatataatttgaactgt 6100035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 232
Target Start/End: Complemental strand, 23442710 - 23442642
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttg 232  Q
    |||||||| |||||||||||||||||  | | ||||| |||||||||| |||  |||||||||||||||    
T  23442710 ttttcaccttataacaaaggaaaacatcattccggataatgaaatccggaaacctcaagggcatttttg 23442642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 232
Target Start/End: Original strand, 33611597 - 33611665
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttg 232  Q
    ||||||||||||||||||| ||||||| | |  ||||||||||||||  |||  |||||||||||||||    
T  33611597 ttttcaccctataacaaagaaaaacaccattctggattatgaaatccagaaacctcaagggcatttttg 33611665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 127
Target Start/End: Original strand, 8704512 - 8704623
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| ||| || || |||||| | || | ||| ||||| |||| | ||||||||||||||||| |||||| ||||||| | | | |||||||    
T  8704512 aaaatgactatccatgatataatcatgttcagaactggtggtgatacagttcggattatataatctgaactatttttcccttgaaatatggtgtttaggg 8704611  T
Q  116 ggtgttcggatt 127  Q
    ||||||| ||||    
T  8704612 ggtgttctgatt 8704623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 27794996 - 27794910
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaa 103  Q
    ||||||| ||||||||||| ||||||||||| |||||| | ||||| ||||   ||||||||||  ||||| |||||| |||||||||    
T  27794996 aaaatgactatctatgttataaacatgtttaaaatttgcgctgatacagttcagattatataattcgaactatttttc-cttgaaaaa 27794910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 214
Target Start/End: Original strand, 41584857 - 41584907
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaa 214  Q
    |||||||||||||||||| |||||||| | | | |||||||||||||||||    
T  41584857 ttttcaccctataacaaaagaaaacaccattcctgattatgaaatccgaaa 41584907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 44573091 - 44573178
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaag 105  Q
    ||||||| |||  ||||||||||||||||||||||||||| | ||| ||||   ||||||||||| ||||| |||| | |||||||||||    
T  44573091 aaaatgactattcatgttacaaacatgtttataatttgtgct-atacagttcagattatataatccgaactattttac-cttgaaaaaag 44573178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 52744837 - 52744925
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaag 105  Q
    ||||||| |||| ||||||||||||||||||  ||||||| ||||| ||||   ||||| ||||| ||| |||||| | |||||||||||    
T  52744837 aaaatgactatccatgttacaaacatgtttagcatttgtgctgatacagttcagattatttaatccgaattgttttac-cttgaaaaaag 52744925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 25563454 - 25563514
Alignment:
Q  70 attatataatctgaactgtttttctcttgaaaaaagatatttagggggtgttcggattata 130  Q
    ||||||||||| |||||||||||| |||||||||  |||||||| |||  ||| |||||||    
T  25563454 attatataatccgaactgtttttcccttgaaaaagaatatttagagggctttcagattata 25563514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 38 - 134
Target Start/End: Complemental strand, 38885370 - 38885275
Alignment:
Q  38 acatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttagggggtgttcggattatataat 134  Q
    ||||||||| |||||||| ||||| |||| | ||||||||||| ||| |||||| | ||||||||| | | |||| ||||| | |||||||| ||||    
T  38885370 acatgtttagaatttgtgctgatacagttcggattatataatccgaaatgttttac-cttgaaaaagggtgtttaaggggtttccggattatgtaat 38885275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 247 - 291
Target Start/End: Original strand, 45568148 - 45568192
Alignment:
Q  247 agggtgcgcgaggaaatgaatagggtgagaaaagtaatagtcaaa 291  Q
    |||||||||||||||| | || ||||| |||||||||||||||||    
T  45568148 agggtgcgcgaggaaaagcattgggtgggaaaagtaatagtcaaa 45568192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 2e-28; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 3703437 - 3703509
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttggaag 236  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  3703437 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccggaaacttcaagggcatttttggaag 3703509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 3703243 - 3703361
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| ||||||||||||||| ||||||| |||||||| ||||| |||||||||||||||| |  ||||||||||| ||||||||| | | |||||||    
T  3703243 aaaatgactatctatgttacaaaaatgtttagaatttgtgctgatacagtttgaattatataaccataactgtttttcccttgaaaaatggtgtttaggg 3703342  T
Q  116 ggtgttcggattatataat 134  Q
    |||||||| ||||| ||||    
T  3703343 ggtgttcgaattatgtaat 3703361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 8106566 - 8106448
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||||||||||||||||| |||||||| ||||| |||| | ||||||||||||||||| |||||| || |||||| | | |||||||    
T  8106566 aaaatgactatccatgttacaaacatgtttaaaatttgtgctgatacagttcggattatataatctgaactatttttccctagaaaaatggtgtttaggg 8106467  T
Q  116 ggtgttcggattatataat 134  Q
    |||||||||||||| ||||    
T  8106466 ggtgttcggattatgtaat 8106448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 19835693 - 19835576
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||||||||||||||||| |||||||| ||||| |||| | ||||||||||| |||||||||| | ||||||||| | | |||||||    
T  19835693 aaaatgactatccatgttacaaacatgtttagaatttgtgctgatacagttcggattatataatccgaactgttttac-cttgaaaaagggtgtttaggg 19835595  T
Q  116 ggtgttcggattatataat 134  Q
    ||| | |||||||| ||||    
T  19835594 ggtttccggattatgtaat 19835576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 41323086 - 41323203
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||  |||  ||| |||||||| ||| |||||||| ||||||||| | | ||||  |    
T  41323086 aaaatgattatccatgttacaaacatgtttagaatttgtgttgatacggttaaaatgatataatccgaattgtttttcccttgaaaaagggtgttta-ag 41323184  T
Q  116 ggtgttcggattatataat 134  Q
    ||||||| |||||||||||    
T  41323185 ggtgttccgattatataat 41323203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 46440268 - 46440385
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| ||||||||| |||||||| |||||||| |||||||||| | ||||||||||| |||||||||| | ||||||||| | | |||||||    
T  46440268 aaaatgaatatccatgttacaaccatgtttagaatttgtgctgatatagttcggattatataatccgaactgttttac-cttgaaaaagggtgtttaggg 46440366  T
Q  116 ggtgttcggattatataat 134  Q
    ||| | |||||||| ||||    
T  46440367 ggtttccggattatgtaat 46440385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 55052613 - 55052730
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||||||||||||||||| |||||||| ||||| |||| | ||||||||||  |||||||||| | ||||||||| | | |||||||    
T  55052613 aaaatgactatccatgttacaaacatgtttagaatttgtgctgataaagttcggattatataattcgaactgttttac-cttgaaaaagggtgtttaggg 55052711  T
Q  116 ggtgttcggattatataat 134  Q
    ||| | |||||||||||||    
T  55052712 ggtttccggattatataat 55052730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 164 - 232
Target Start/End: Original strand, 41413262 - 41413330
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttg 232  Q
    ||||||||||||||||||| ||||||||| | ||||||||||||||||||||| |||||| ||||||||    
T  41413262 ttttcaccctataacaaagaaaaacactattccggattatgaaatccgaaaatctcaaggacatttttg 41413330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 38536150 - 38536080
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttggaa 235  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||| ||| | |||||||||||||||||    
T  38536150 ttttcaccctataacaaaggaaaacaccatttcggattatgaaatccggaaa-tgcaagggcatttttggaa 38536080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 48319058 - 48319176
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttg-aaaaaagatatttagg 114  Q
    ||||||| |||| |||||||||||||||||| |||||||| ||||| |||| | ||||||||||| || ||||||| | |||| ||||||| | ||||||    
T  48319058 aaaatgactatcaatgttacaaacatgtttagaatttgtgctgatacagttcggattatataatccgagctgttttac-cttgaaaaaaaggtgtttagg 48319156  T
Q  115 gggtgttcggattatataat 134  Q
    |||| |||||||||| ||||    
T  48319157 gggttttcggattatgtaat 48319176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 2506025 - 2506142
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||||||||||||||||| |||||||| ||||| |||| | |||||||||||  ||||||||| | ||||||||| | | |||||||    
T  2506025 aaaatgactatccatgttacaaacatgtttaaaatttgtgctgatacagttcggattatataatccaaactgttttac-cttgaaaaagggtgtttaggg 2506123  T
Q  116 ggtgttcggattatataat 134  Q
    ||| | |||||||| ||||    
T  2506124 ggtttccggattatgtaat 2506142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 40703837 - 40703736
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||||||||||||||||| |||||||| ||||| |||| | ||||||||||| |||||||||| | ||||||||| | | |||||||    
T  40703837 aaaatgactatccatgttacaaacatgtttagaatttgtgctgatacagttcggattatataatccgaactgttttac-cttgaaaaagggtgtttaggg 40703739  T
Q  116 ggt 118  Q
    |||    
T  40703738 ggt 40703736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 164 - 232
Target Start/End: Complemental strand, 34972854 - 34972786
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttg 232  Q
    ||||||||||||||||||||||||||| | | |||||||||||||||| |||  |||||||||||||||    
T  34972854 ttttcaccctataacaaaggaaaacaccattccggattatgaaatccggaaacctcaagggcatttttg 34972786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 55052806 - 55052877
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttggaag 236  Q
    ||||||||||||||||||||||||||| | | |||||||||||||||| |||  |||||||||||||||||||    
T  55052806 ttttcaccctataacaaaggaaaacaccattccggattatgaaatccggaaa-ctcaagggcatttttggaag 55052877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 17933131 - 17933206
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttt 91  Q
    |||||||||||| |||||||||||||||||| |||||||| |||||  ||| | ||||||||||| ||||||||||    
T  17933131 aaaatgattatccatgttacaaacatgtttagaatttgtgctgatactgttcggattatataatccgaactgtttt 17933206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 37222127 - 37222024
Alignment:
Q  23 ttatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttagggggtgttc 122  Q
    ||||| |||||||||||||||||| ||||| || ||||| | ||  |||||||||||| |||||||||||| ||||||||| | | ||||| | ||||||    
T  37222127 ttatccatgttacaaacatgtttagaatttatgctgatacaattcaaattatataatccgaactgtttttcccttgaaaaagggtgtttagagagtgttc 37222028  T
Q  123 ggat 126  Q
    ||||    
T  37222027 ggat 37222024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 25491389 - 25491506
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||  |||||||||||||||||| |||||||| ||||| ||||   ||||||||||| ||| |||||| | ||||||||||| | |||||||    
T  25491389 aaaatgactattcatgttacaaacatgtttagaatttgtgctgatacagttcagattatataatccgaattgttttac-cttgaaaaaaggtgtttaggg 25491487  T
Q  116 ggtgttcggattatataat 134  Q
    ||| | |||||||| ||||    
T  25491488 ggtttccggattatgtaat 25491506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 31582416 - 31582533
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||||||||||||||||| |||||||| ||||| | ||   ||||||||||| |||||||||| | ||||||||| | | |||||||    
T  31582416 aaaatgactatccatgttacaaacatgtttagaatttgtgctgatacaattcagattatataatccgaactgttttac-cttgaaaaagggtgtttaggg 31582514  T
Q  116 ggtgttcggattatataat 134  Q
    ||| | |||||||| ||||    
T  31582515 ggtttccggattatgtaat 31582533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 38416987 - 38416913
Alignment:
Q  29 atgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaa 103  Q
    |||||||||||||||||| |||||||| ||||| ||||   |||||||||| ||||||||||||| |||||||||    
T  38416987 atgttacaaacatgtttaaaatttgtgctgatacagttcagattatataatttgaactgtttttcccttgaaaaa 38416913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 38536343 - 38536226
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||  |||||||||||||||||| ||||||||  |||| | |||  ||||||||||| |||||||||| | ||||||||||| | |||||||    
T  38536343 aaaatgactattcatgttacaaacatgtttagaatttgtgcagatacaatttagattatataatccgaactgttttac-cttgaaaaaaggtgtttaggg 38536245  T
Q  116 ggtgttcggattatataat 134  Q
    ||| | |||||||| ||||    
T  38536244 ggtttccggattatgtaat 38536226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 164 - 232
Target Start/End: Complemental strand, 32441791 - 32441723
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttg 232  Q
    ||||||||||||||||||||||||||| | | |||||||||||||||| |||  ||||||| |||||||    
T  32441791 ttttcaccctataacaaaggaaaacaccattccggattatgaaatccggaaacctcaagggtatttttg 32441723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 7863614 - 7863527
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaa 103  Q
    ||||||||| || |||||||||||||||||| ||||||||  |||| ||||   ||||||||||| |||||||||||  |||||||||    
T  7863614 aaaatgattgtccatgttacaaacatgtttagaatttgtgcagatacagttcagattatataatccgaactgttttttccttgaaaaa 7863527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 42660445 - 42660516
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttggaa 235  Q
    |||||||||| |||||||||||||||||| |  ||||||| ||||||| ||| |||||||| ||||||||||    
T  42660445 ttttcaccctttaacaaaggaaaacactattctggattataaaatccggaaacttcaagggtatttttggaa 42660516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 24 - 102
Target Start/End: Original strand, 14474213 - 14474291
Alignment:
Q  24 tatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaa 102  Q
    |||| |||||||||||||||| | |||||||||||||| | ||   |||||||||| ||||||||||||| ||||||||    
T  14474213 tatccatgttacaaacatgttcaaaatttgtgttgatacaattcagattatataatatgaactgtttttcccttgaaaa 14474291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 25752438 - 25752555
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||||||||||||||||| |||||||| | ||| | || | || |||||||| |||||||||| | ||||||||| | | |||| ||    
T  25752438 aaaatgactatccatgttacaaacatgtttagaatttgtgctaatacatttcggatcatataatccgaactgttttac-cttgaaaaagggtgtttatgg 25752536  T
Q  116 ggtgttcggattatataat 134  Q
    ||| |||||||||| ||||    
T  25752537 ggttttcggattatgtaat 25752555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 164 - 230
Target Start/End: Complemental strand, 38416545 - 38416479
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttt 230  Q
    |||||||||||||||||||||||||||   ||| ||||||||||| |||||| ||||||| ||||||    
T  38416545 ttttcaccctataacaaaggaaaacacctattcagattatgaaattcgaaaacttcaaggacatttt 38416479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 105
Target Start/End: Complemental strand, 1788126 - 1788078
Alignment:
Q  57 tgatatagtttgaattatataatctgaactgtttttctcttgaaaaaag 105  Q
    ||||| |||||| ||||||||||||||||| ||||||||||||||||||    
T  1788126 tgatacagtttggattatataatctgaactatttttctcttgaaaaaag 1788078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 232
Target Start/End: Original strand, 6228998 - 6229066
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttg 232  Q
    ||||||||||||||||||||||||||| | | |||||||||||||||  |||  |||||| ||||||||    
T  6228998 ttttcaccctataacaaaggaaaacaccattccggattatgaaatcctgaaacctcaaggacatttttg 6229066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 7863204 - 7863152
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaat 216  Q
    ||||||||||| ||||||||||||||||||||| |||| | ||||||||||||    
T  7863204 ttttcaccctaaaacaaaggaaaacactagttcagattttaaaatccgaaaat 7863152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 7863420 - 7863368
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaat 216  Q
    ||||||||||| |||||||||||||||||||||||||| | |||| |||||||    
T  7863420 ttttcaccctaaaacaaaggaaaacactagttcggattttaaaattcgaaaat 7863368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 232
Target Start/End: Complemental strand, 23523886 - 23523818
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttg 232  Q
    |||||||||| |||||||||||||||  | | || |||||||||||| ||||| |||||||||||||||    
T  23523886 ttttcaccctctaacaaaggaaaacatcattccgaattatgaaatcctaaaatctcaagggcatttttg 23523818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 53894019 - 53894083
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatc 80  Q
    ||||||| |||| |||||||||||||||||| |||||||| ||||| |||| | |||||||||||    
T  53894019 aaaatgactatccatgttacaaacatgtttagaatttgtgctgatacagttcggattatataatc 53894083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 7931822 - 7931755
Alignment:
Q  24 tatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttt 91  Q
    |||| |||||||||||||||||| |||||||| | ||||||||   ||||||||||| ||||||||||    
T  7931822 tatccatgttacaaacatgtttagaatttgtgctaatatagttcagattatataatccgaactgtttt 7931755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 49002848 - 49002911
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataat 79  Q
    ||||||| ||| |||||||||||||| |||| |||||||| |||||||||||| | ||||||||    
T  49002848 aaaatgactatttatgttacaaacatatttagaatttgtgctgatatagtttggaatatataat 49002911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 129
Target Start/End: Complemental strand, 52077101 - 52077024
Alignment:
Q  51 ttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttagggggtgttcggattat 129  Q
    ||||| ||||| | ||||||||||||||||||||||||||| | ||||||||| | |||||||| ||| | ||||||||    
T  52077101 ttgtgctgatacaatttgaattatataatctgaactgttttac-cttgaaaaatggtatttaggaggtttccggattat 52077024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 346190 - 346277
Alignment:
Q  47 taatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttagggggtgttcggattatataatt 135  Q
    ||||||||||||||| ||||   ||| |||||||||||||| ||||| |||||| || | | |||| |||||||||| |||||||||||    
T  346190 taatttgtgttgatacagttcagattctataatctgaactg-ttttcccttgaataatggtgtttaaggggtgttcgaattatataatt 346277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 25539135 - 25539182
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccg 211  Q
    |||||||| |||||||||||||||||| | | ||||||||||||||||    
T  25539135 ttttcaccatataacaaaggaaaacaccattccggattatgaaatccg 25539182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 210
Target Start/End: Original strand, 6003860 - 6003906
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatcc 210  Q
    ||||||||||||||||||||||| ||| | | |||||||||||||||    
T  6003860 ttttcaccctataacaaaggaaaccaccattccggattatgaaatcc 6003906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 47456721 - 47456656
Alignment:
Q  68 gaattatataatctgaactgtttttctcttgaaaaaagatatttagggggtgttcggattatataat 134  Q
    |||||||||||| |||| |||||||| | ||||||||||| ||||||| |||||| |||| ||||||    
T  47456721 gaattatataatatgaa-tgtttttcccctgaaaaaagatgtttagggcgtgttccgattttataat 47456656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 7817564 - 7817633
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttgg 233  Q
    |||||||||||| ||||| |||||||| |||||| ||| | ||||||| ||||  ||| |||||||||||    
T  7817564 ttttcaccctattacaaaagaaaacaccagttcgaattttaaaatccggaaatcacaaaggcatttttgg 7817633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 25538973 - 25539018
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgata 61  Q
    ||||||| |||| |||||||||||||||||| |||||||| |||||    
T  25538973 aaaatgactatccatgttacaaacatgtttagaatttgtgctgata 25539018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 247 - 287
Target Start/End: Original strand, 16024954 - 16024994
Alignment:
Q  247 agggtgcgcgaggaaatgaatagggtgagaaaagtaatagt 287  Q
    |||| ||||||||||| | ||||||||||||||||||||||    
T  16024954 agggcgcgcgaggaaaggcatagggtgagaaaagtaatagt 16024994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 91
Target Start/End: Complemental strand, 29822773 - 29822717
Alignment:
Q  35 caaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttt 91  Q
    |||||||||||| |||||||| ||||| |||| | ||||||||||| ||| ||||||    
T  29822773 caaacatgtttagaatttgtgctgatacagttcggattatataatccgaattgtttt 29822717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 31582555 - 31582595
Alignment:
Q  170 ccctataacaaaggaaaacactagttcggattatgaaatcc 210  Q
    ||||||||||||||||||||| | | |||||||||||||||    
T  31582555 ccctataacaaaggaaaacacaattccggattatgaaatcc 31582595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 129
Target Start/End: Complemental strand, 34973024 - 34972925
Alignment:
Q  29 atgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttagggggtgttcggatta 128  Q
    |||||||||| |||||||  |||| || ||||| |||| | ||||||||||| ||||| |||| | ||| ||||| | | |||||||||| |||||||||    
T  34973024 atgttacaaatatgtttaggatttatgctgatacagttcggattatataatccgaactattttac-cttaaaaaatggtgtttagggggttttcggatta 34972926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 194 - 234
Target Start/End: Original strand, 49003013 - 49003053
Alignment:
Q  194 ttcggattatgaaatccgaaaatttcaagggcatttttgga 234  Q
    |||| |||||||||||||||||||||||||  |||||||||    
T  49003013 ttcgaattatgaaatccgaaaatttcaaggatatttttgga 49003053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 4e-27; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 32 - 134
Target Start/End: Original strand, 6467150 - 6467252
Alignment:
Q  32 ttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttagggggtgttcggattatat 131  Q
    ||||||||||||||| || |||||||||||||||| | ||||||||||||||| |||||||| ||||||||| ||| ||||| ||||||||||||| |||    
T  6467150 ttacaaacatgtttagaacttgtgttgatatagttcggattatataatctgaattgtttttcccttgaaaaatgatgtttagagggtgttcggattctat 6467249  T
Q  132 aat 134  Q
    |||    
T  6467250 aat 6467252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 98
Target Start/End: Complemental strand, 1518872 - 1518790
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttg 98  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||| |||| | ||||||||||| |||||||||||| ||||    
T  1518872 aaaatgattatcgatgttacaaacatgtttataatttgtgctgatacagttcggattatataatccgaactgtttttcccttg 1518790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 9151961 - 9151844
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||||||||||||||||| |||||||| ||||| |||| | ||||||||||||| |||||||| | ||||||||| ||| |||||||    
T  9151961 aaaatgactatccatgttacaaacatgtttagaatttgtgctgatacagttcggattatataatctggactgttttac-cttgaaaaaggatgtttaggg 9151863  T
Q  116 ggtgttcggattatataat 134  Q
    ||| | |||||||| ||||    
T  9151862 ggtttccggattatgtaat 9151844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 42925635 - 42925752
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||||||||||||||||| |||||||| ||||| |||| | ||||||||||| |||||||||| | ||||||||||| | |||||||    
T  42925635 aaaatgactatccatgttacaaacatgtttagaatttgtgctgatacagttcgtattatataatccgaactgttttac-cttgaaaaaaggtgtttaggg 42925733  T
Q  116 ggtgttcggattatataat 134  Q
    ||| | |||||||| ||||    
T  42925734 ggtttccggattatgtaat 42925752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 36 - 134
Target Start/End: Complemental strand, 6467843 - 6467745
Alignment:
Q  36 aaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttagggggtgttcggattatataat 134  Q
    ||||||||||| ||||| || ||||| |||| | ||||||||||| |||||||||||| ||||||||| | | ||||||||||||||||||||| ||||    
T  6467843 aaacatgtttaaaatttatgctgatacagttcggattatataatccgaactgtttttcccttgaaaaagggtgtttagggggtgttcggattatgtaat 6467745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 24042182 - 24042299
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||||||||||||||||| |||||||| ||||| |||| | ||||||||||| |||||||||| | ||||||||| | | |||||||    
T  24042182 aaaatgactatcaatgttacaaacatgtttagaatttgtgctgatacagttcggattatataatccgaactgttttac-cttgaaaaatggtgtttaggg 24042280  T
Q  116 ggtgttcggattatataat 134  Q
    ||| | |||||||| ||||    
T  24042281 ggtttccggattatgtaat 24042299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 28230462 - 28230579
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||||||||||||||||| |||||||| ||||| |||| | ||||||||||| |||||||||| | ||||||||| | | |||||||    
T  28230462 aaaatgactatccatgttacaaacatgtttagaatttgtgctgatacagttcggattatataatccgaactgttttac-cttgaaaaagggtgtttaggg 28230560  T
Q  116 ggtgttcggattatataat 134  Q
    ||| | |||||||| ||||    
T  28230561 ggtttccggattatgtaat 28230579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 31985511 - 31985629
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||  |||||| ||| ||||||| |||||||||||||| |||| ||||||||||||| |||||||||  | ||||||||| | | |||| ||    
T  31985511 aaaatgactattcatgttaaaaatatgtttaaaatttgtgttgatacagttcgaattatataatccgaactgtttcccccttgaaaaatggtgtttaagg 31985610  T
Q  116 ggtgttcggattatataat 134  Q
    |||||||| ||||| ||||    
T  31985611 ggtgttcgaattatgtaat 31985629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 37518289 - 37518406
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| ||||| ||||||||||||||||| ||||| || ||||| |||| | ||||||||||| |||||||||| | ||||||||| | | |||||||    
T  37518289 aaaatgactatctctgttacaaacatgtttagaatttatgctgatacagttcggattatataatccgaactgttttac-cttgaaaaatggtgtttaggg 37518387  T
Q  116 ggtgttcggattatataat 134  Q
    ||| | |||||||| ||||    
T  37518388 ggtttccggattatgtaat 37518406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 33151360 - 33151298
Alignment:
Q  29 atgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttt 91  Q
    |||||||||||||||||| |||||||| ||||| |||| ||||||||||||| ||||||||||    
T  33151360 atgttacaaacatgtttagaatttgtgctgatacagttcgaattatataatccgaactgtttt 33151298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 36468531 - 36468648
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||||||||||||||||| |||||||| ||||| |||| | ||||||||||   ||||||||| | ||||||||| | | |||||||    
T  36468531 aaaatgactatccatgttacaaacatgtttagaatttgtgctgatacagttcggattatataattcaaactgttttac-cttgaaaaagggtgtttaggg 36468629  T
Q  116 ggtgttcggattatataat 134  Q
    ||| | |||||||| ||||    
T  36468630 ggtttccggattatgtaat 36468648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 164 - 232
Target Start/End: Complemental strand, 47202466 - 47202398
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttg 232  Q
    |||||||||||||||||| |||||||| | | |||||||||||||||| |||  |||||||||||||||    
T  47202466 ttttcaccctataacaaaagaaaacaccattccggattatgaaatccggaaacctcaagggcatttttg 47202398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 230
Target Start/End: Original strand, 31985697 - 31985763
Alignment:
Q  164 ttttcaccctataacaaaggaaaacact-agttcggattatgaaatccgaaaatttcaagggcatttt 230  Q
    |||||| | ||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||    
T  31985697 ttttcatcttataacaaaggaaaa-actgaattcggattatgaaatccgaaaatttcaagggcatttt 31985763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 3936273 - 3936156
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    |||||||||||| |||||||||||||||||| |||||||| | ||| | || | ||||||||||  | |||||||| | ||||||||| | | |||||||    
T  3936273 aaaatgattatccatgttacaaacatgtttacaatttgtgctaatacatttcggattatataattcggactgttttac-cttgaaaaagggtgtttaggg 3936175  T
Q  116 ggtgttcggattatataat 134  Q
    ||| || ||||||| ||||    
T  3936174 ggtttttggattatgtaat 3936156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 5278429 - 5278311
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||||||||||||||| | ||||| || | ||| ||||   ||||||||||| ||||| |||||| ||||||| | | |||||| ||    
T  5278429 aaaatgactatccatgttacaaacatgttcaaaatttatgctaatacagttcagattatataatccgaactatttttcccttgaaagagggtatttaagg 5278330  T
Q  116 ggtgttcggattatataat 134  Q
    |||||| ||||| ||||||    
T  5278329 ggtgtttggattctataat 5278311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 197 - 291
Target Start/End: Original strand, 26555243 - 26555336
Alignment:
Q  197 ggattatgaaatccgaaaatttcaagggcatttttggaagnnnnnnnnntagggtgcgcgaggaaatgaatagggtgagaaaagtaatagtcaaa 291  Q
    |||||||||||||| |||||||||||| ||||||||||||         ||||| |||||| ||||||||||||||| ||||| |||||||||||    
T  26555243 ggattatgaaatccaaaaatttcaaggacatttttggaag-aaaacaaatagggcgcgcgaagaaatgaatagggtgggaaaactaatagtcaaa 26555336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 36946285 - 36946403
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    |||||||||||  ||||||||||||| || | |||||||| ||||| |||| |  |||||||||| ||| |||||||| ||||||||||| | ||||       
T  36946285 aaaatgattattcatgttacaaacatattcagaatttgtgctgatacagttcgggttatataatccgaattgtttttcccttgaaaaaaggtgtttaaat 36946384  T
Q  116 ggtgttcggattatataat 134  Q
    |||||| ||||| ||||||    
T  36946385 ggtgtttggattttataat 36946403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 42865096 - 42865208
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| ||||||||||||| |||| |||||||| ||||| |||| | ||||||||||| | |||||||| | ||||||||  | | |||||||    
T  42865096 aaaatgactatccatgttacaaacatatttagaatttgtgctgatacagttcggattatataatccggactgttttac-cttgaaaaggggtgtttaggg 42865194  T
Q  116 ggtgttcggattat 129  Q
    ||| | ||||||||    
T  42865195 ggtttccggattat 42865208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 43185948 - 43185887
Alignment:
Q  15 aaaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatat 76  Q
    ||||||||||||| |||||| ||||||||||| |||||||| ||||| |||||| |||||||    
T  43185948 aaaaatgattatccatgttataaacatgtttaaaatttgtgctgatacagtttggattatat 43185887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 36408528 - 36408461
Alignment:
Q  24 tatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttt 91  Q
    |||| |||||||||||||||||| |||||||| ||||| |||| | ||||||||||  ||||||||||    
T  36408528 tatccatgttacaaacatgtttagaatttgtgctgatacagttcggattatataattcgaactgtttt 36408461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 42925828 - 42925875
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccg 211  Q
    ||||||||||||||||||||||||||| | | ||||||||||||||||    
T  42925828 ttttcaccctataacaaaggaaaacaccattccggattatgaaatccg 42925875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 19225592 - 19225709
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||||||||||||||||| |||||||| |||||  |||   ||||||||||| ||| || |||| |||||||||| | | |||||||    
T  19225592 aaaatgaatatccatgttacaaacatgtttagaatttgtgctgataccgttcagattatataatccgaattg-ttttatcttgaaaaatggtgtttaggg 19225690  T
Q  116 ggtgttcggattatataat 134  Q
    | | | |||||||| ||||    
T  19225691 gatttccggattatgtaat 19225709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 29 - 134
Target Start/End: Complemental strand, 8155051 - 8154947
Alignment:
Q  29 atgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttagggggtgttcggatta 128  Q
    |||||||||| |||||||  ||||||| ||||| |||||  ||||||||||| ||||| |||| | ||| ||||| | | |||||||||| |||||||||    
T  8155051 atgttacaaatatgtttaggatttgtgctgatagagtttagattatataatccgaactattttac-cttaaaaaagggtgtttagggggttttcggatta 8154953  T
Q  129 tataat 134  Q
    | ||||    
T  8154952 tgtaat 8154947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 232
Target Start/End: Original strand, 3304946 - 3305014
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttg 232  Q
    ||||||||||||||||||||||||||| | | |  ||||||||||||| |||| |||| | ||||||||    
T  3304946 ttttcaccctataacaaaggaaaacaccattccaaattatgaaatccggaaatctcaaagacatttttg 3305014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 231
Target Start/End: Original strand, 5731384 - 5731451
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcattttt 231  Q
    |||||||||||| |||||||||||||| ||||||| || | ||||||  |||| |||||||| |||||    
T  5731384 ttttcaccctattacaaaggaaaacaccagttcgggttttaaaatccagaaatctcaagggccttttt 5731451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 6467668 - 6467597
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttggaa 235  Q
    |||||||| | |||||||||||||||| | | || || || ||||||| ||| |||||||||||||||||||    
T  6467668 ttttcaccatttaacaaaggaaaacaccattccgaatcataaaatccggaaacttcaagggcatttttggaa 6467597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 135
Target Start/End: Original strand, 7115296 - 7115383
Alignment:
Q  48 aatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttagggggtgttcggattatataatt 135  Q
    ||||||||||||||  ||  ||||||||||||| ||| |||||||| | | ||||| | | |||||||||| ||| ||||||||||||    
T  7115296 aatttgtgttgatacggtccgaattatataatccgaattgtttttccccttaaaaatggtgtttagggggttttcagattatataatt 7115383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 293
Target Start/End: Complemental strand, 43744763 - 43744716
Alignment:
Q  246 tagggtgcgcgaggaaatgaatagggtgagaaaagtaatagtcaaata 293  Q
    ||||| ||||||||||| |  |||||||||||||||||||||||||||    
T  43744763 tagggcgcgcgaggaaaggcttagggtgagaaaagtaatagtcaaata 43744716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 24690328 - 24690445
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    |||||||  ||| |||||||||||||| ||| ||||| || ||||| ||||   |||||||||||  | ||||||||| ||||||||| | | |||  ||    
T  24690328 aaaatgacgatccatgttacaaacatgcttaaaatttatgctgatacagttcagattatataatcc-atctgtttttcccttgaaaaagggtgtttgagg 24690426  T
Q  116 ggtgttcggattatataat 134  Q
    |||||||||||| ||||||    
T  24690427 ggtgttcggattgtataat 24690445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 48 - 134
Target Start/End: Original strand, 25613139 - 25613225
Alignment:
Q  48 aatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttagggggtgttcggattatataat 134  Q
    ||||| || ||||| |||||||||| ||||||| ||||||| |||| | |||| || | | ||||||||||| ||||||| ||||||    
T  25613139 aatttatgctgatacagtttgaattttataatccgaactgtctttcccctgaataatggtgtttagggggtgctcggattctataat 25613225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 31643013 - 31642951
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggca 226  Q
    |||||||||||||||||| |||||||| | | | |||||||||||||| |||  |||||||||    
T  31643013 ttttcaccctataacaaacgaaaacaccattccagattatgaaatccggaaacctcaagggca 31642951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 36629357 - 36629295
Alignment:
Q  29 atgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttt 91  Q
    |||| ||||||||||||| |||||| | ||||| |||| | ||||||||||| ||||||||||    
T  36629357 atgtaacaaacatgtttaaaatttgcgctgatacagttcggattatataatccgaactgtttt 36629295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 283
Target Start/End: Complemental strand, 24686253 - 24686216
Alignment:
Q  246 tagggtgcgcgaggaaatgaatagggtgagaaaagtaa 283  Q
    ||||| ||||||||||||||||| ||||||||||||||    
T  24686253 tagggcgcgcgaggaaatgaataaggtgagaaaagtaa 24686216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 291
Target Start/End: Original strand, 33952010 - 33952055
Alignment:
Q  246 tagggtgcgcgaggaaatgaatagggtgagaaaagtaatagtcaaa 291  Q
    ||||| ||||||||||| | |||||||| |||||||||||||||||    
T  33952010 tagggcgcgcgaggaaaggcatagggtgggaaaagtaatagtcaaa 33952055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 134
Target Start/End: Complemental strand, 47202646 - 47202542
Alignment:
Q  29 atgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttagggggtgttcggatta 128  Q
    |||||||||| |||||||  ||||||| ||||| |||| | ||||||||||| ||||| |||| | ||| ||||| | | |||||||||| | |||||||    
T  47202646 atgttacaaatatgtttaggatttgtgctgatacagttcggattatataatccgaactattttac-cttaaaaaagggtgtttagggggtttccggatta 47202548  T
Q  129 tataat 134  Q
    | ||||    
T  47202547 tgtaat 47202542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 164 - 232
Target Start/End: Original strand, 8214695 - 8214763
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttg 232  Q
    |||||| ||||||| ||||||||||||  |||| |||| | |||||||||||| |||| | ||||||||    
T  8214695 ttttcatcctataataaaggaaaacaccggttcagattttaaaatccgaaaatctcaaagacatttttg 8214763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 24042375 - 24042446
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttggaag 236  Q
    ||||||||||||| ||||||||||||| | | || |||||||||| | | ||  |||||||||||||||||||    
T  24042375 ttttcaccctatatcaaaggaaaacaccattccgaattatgaaattc-agaaactcaagggcatttttggaag 24042446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 134
Target Start/End: Complemental strand, 39581893 - 39581786
Alignment:
Q  29 atgttacaaacatgtttataatttgtgt--tgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttagggggtgttcggat 126  Q
    ||||||||||||   |||||||||||||  ||||| |||| | ||||||||||||||| | ||| || ||||||||| | | |||| |||||||| | ||    
T  39581893 atgttacaaacaaacttataatttgtgtgctgatacagttcggattatataatctgaattatttctcccttgaaaaagggtgtttatggggtgtttgaat 39581794  T
Q  127 tatataat 134  Q
    | ||||||    
T  39581793 tctataat 39581786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 4e-27; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 38977742 - 38977859
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| ||||||||||||||||||||||||||| ||||| |||| | |||||||||| ||||||||||| | ||||||||||| | |||||||    
T  38977742 aaaatgactatccatgttacaaacatgtttataatttgtgctgatacagttcggattatataatttgaactgttttac-cttgaaaaaaggtgtttaggg 38977840  T
Q  116 ggtgttcggattatataat 134  Q
    ||| |||||||||| ||||    
T  38977841 ggttttcggattatgtaat 38977859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 29 - 134
Target Start/End: Complemental strand, 29048495 - 29048390
Alignment:
Q  29 atgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttagggggtgttcggatta 128  Q
    ||||||||||||| || | |||||||||||||||||||   ||||||||||||||| |||||||| ||||||||| ||| |||||||||||||||||||     
T  29048495 atgttacaaacatattcagaatttgtgttgatatagttccgattatataatctgaattgtttttcccttgaaaaaggatgtttagggggtgttcggattc 29048396  T
Q  129 tataat 134  Q
    ||||||    
T  29048395 tataat 29048390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 31 - 134
Target Start/End: Original strand, 30721813 - 30721917
Alignment:
Q  31 gttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttagggg-gtgttcggattat 129  Q
    |||||||||||||||| |||||||| ||||| |||| | ||||||||||||||||| |||||| ||||||||| | | |||||||| |||||||||||||    
T  30721813 gttacaaacatgtttagaatttgtgctgatacagttcggattatataatctgaactatttttcccttgaaaaatggtgtttaggggagtgttcggattat 30721912  T
Q  130 ataat 134  Q
     ||||    
T  30721913 gtaat 30721917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 16 - 135
Target Start/End: Original strand, 49096221 - 49096339
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| ||||||||||||||||||||||| |||||||| ||||| ||||   ||||||||||   ||||||||||| ||||||||| | | |||||||    
T  49096221 aaaatgactatctatgttacaaacatgtttaaaatttgtgctgatacagttcagattatataattcaaactgtttttc-cttgaaaaaggctgtttaggg 49096319  T
Q  116 ggtgttcggattatataatt 135  Q
    |||||| ||||||| |||||    
T  49096320 ggtgtttggattatgtaatt 49096339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 3902800 - 3902917
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    |||||||| ||| |||||||||||||||||| |||||||| ||||| |||| | ||||||||||| |||||||||| | ||||||||| | | |||||||    
T  3902800 aaaatgatcatccatgttacaaacatgtttagaatttgtgctgatacagttcggattatataatccgaactgttttac-cttgaaaaagggtgtttaggg 3902898  T
Q  116 ggtgttcggattatataat 134  Q
    ||| | |||||||| ||||    
T  3902899 ggtttccggattatgtaat 3902917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 51258568 - 51258450
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||||| ||||||||||| |||||||| ||||| |||| | ||||||||||   || |||||||| ||||||||| | | |||||||    
T  51258568 aaaatgactatccatgttataaacatgtttaaaatttgtgctgatacagttcggattatataattcaaattgtttttcccttgaaaaatggtgtttaggg 51258469  T
Q  116 ggtgttcggattatataat 134  Q
    |||||||||||||| ||||    
T  51258468 ggtgttcggattatgtaat 51258450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 34821337 - 34821454
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| ||||||||||||||||||||||| |||||||| ||||| ||||   ||||||||||| ||||| |||| | ||||||||| | | |||||||    
T  34821337 aaaatgactatctatgttacaaacatgtttagaatttgtgctgatacagttcagattatataatccgaactattttac-cttgaaaaatggtgtttaggg 34821435  T
Q  116 ggtgttcggattatataat 134  Q
    ||| | |||||||| ||||    
T  34821436 ggtttccggattatgtaat 34821454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 45712078 - 45712196
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    |||||||||||| |||||||||||||| | |||||||||| ||||| ||||   ||||||||||| |||||||||||| |||||| || | | ||||||     
T  45712078 aaaatgattatccatgttacaaacatgatcataatttgtgctgatacagttcagattatataatccgaactgtttttcccttgaataagggtttttagga 45712177  T
Q  116 ggtgttcggattatataat 134  Q
    | |||| ||||| ||||||    
T  45712178 gatgtttggattctataat 45712196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 28873170 - 28873095
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttt 91  Q
    ||||||| ||||||||||||||||||||||| |||||||| ||||| ||||   ||||||||||| ||||||||||    
T  28873170 aaaatgactatctatgttacaaacatgtttagaatttgtgctgatacagttcagattatataatccgaactgtttt 28873095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 164 - 231
Target Start/End: Complemental strand, 47301991 - 47301924
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcattttt 231  Q
    ||||||||||||||||||||||||||| | | || ||||||||||||||||| ||||||| |||||||    
T  47301991 ttttcaccctataacaaaggaaaacaccattccgaattatgaaatccgaaaacttcaaggacattttt 47301924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 39149974 - 39149857
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| || | |||||||||||||||||| |||||||| ||||| |||| | ||||||||| | |||||||||| | ||||||||| | | |||||||    
T  39149974 aaaatgactaccaatgttacaaacatgtttaaaatttgtgctgatagagttcggattatataacccgaactgttttac-cttgaaaaatggtgtttaggg 39149876  T
Q  116 ggtgttcggattatataat 134  Q
    ||| | |||||||| ||||    
T  39149875 ggtttccggattatgtaat 39149857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 43420124 - 43420242
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    |||||||||||| ||||||||||| |||| |||||||||||||||| | ||   |||||||||||  || ||| ||||||||||| || | | |||| ||    
T  43420124 aaaatgattatccatgttacaaacgtgttcataatttgtgttgatacaattctgattatataatccaaattgtatttctcttgaataagggtgtttatgg 43420223  T
Q  116 ggtgttcggattatataat 134  Q
    |||||| ||||| ||||||    
T  43420224 ggtgtttggattctataat 43420242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 33700729 - 33700657
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttggaag 236  Q
    |||||||||| |||||||||||||||| | | |||||||||||||||  ||| ||||||| ||||||||||||    
T  33700729 ttttcaccctttaacaaaggaaaacaccattccggattatgaaatccagaaacttcaaggacatttttggaag 33700657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 164 - 232
Target Start/End: Complemental strand, 52777213 - 52777145
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttg 232  Q
    |||||| |||||||||||||||||||| | | | ||||||||||||||||||  |||||||||||||||    
T  52777213 ttttcatcctataacaaaggaaaacaccattccagattatgaaatccgaaaacctcaagggcatttttg 52777145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 52777383 - 52777308
Alignment:
Q  29 atgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaag 105  Q
    |||||||||||||||||| |||||||| ||||| ||||  |||||||||||| |||||||||| | |||||||||||    
T  52777383 atgttacaaacatgtttagaatttgtgctgatacagttcaaattatataatccgaactgttttac-cttgaaaaaag 52777308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 215
Target Start/End: Original strand, 30721997 - 30722048
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaa 215  Q
    ||||||| ||||||||||||||||||| ||||| ||||||||||||||||||    
T  30721997 ttttcactctataacaaaggaaaacaccagttcagattatgaaatccgaaaa 30722048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 16 - 118
Target Start/End: Original strand, 501135 - 501235
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| || ||||||||||||||| |||||||| | ||| |||| | ||||||||||| |||||||||| | ||||||||||| | |||||||    
T  501135 aaaatgactatccattttacaaacatgtttagaatttgtgcttatacagttcggattatataatc-gaactgttttac-cttgaaaaaaggtgtttaggg 501232  T
Q  116 ggt 118  Q
    |||    
T  501233 ggt 501235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 24 - 134
Target Start/End: Original strand, 5127901 - 5128010
Alignment:
Q  24 tatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttagggggtgttcg 123  Q
    |||| |||||||||||||||||| ||||| || ||||| | ||   ||||||||| |||||||||||||| |||||||| |  | |||| | ||||||||    
T  5127901 tatccatgttacaaacatgtttaaaatttatgctgatacaattcagattatataaactgaactgtttttcccttgaaaataagtgttta-gaggtgttcg 5127999  T
Q  124 gattatataat 134  Q
    |||||||||||    
T  5128000 gattatataat 5128010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 35142239 - 35142122
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||||||||||||||||| |||||||| ||||| | ||   ||||||||||| |||||||||| | ||| ||||| | | |||||||    
T  35142239 aaaatgactatccatgttacaaacatgtttagaatttgtgctgatacaattcatattatataatccgaactgttttac-cttaaaaaatggtgtttaggg 35142141  T
Q  116 ggtgttcggattatataat 134  Q
    ||| | |||||||| ||||    
T  35142140 ggtttccggattatgtaat 35142122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 164 - 230
Target Start/End: Complemental strand, 42936641 - 42936575
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttt 230  Q
    |||||||||| |||||||||||||||| | | |||||||||||||||| ||| |||||||| |||||    
T  42936641 ttttcaccctttaacaaaggaaaacaccattccggattatgaaatccggaaacttcaagggtatttt 42936575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 47980000 - 47980118
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| ||||||||||| ||| ||||| | |||||||| ||||| |||| | ||||||||||    ||||||||||  |||||||||  | |||||||    
T  47980000 aaaatgactatctatgttataaatatgttcaaaatttgtgctgatacagttcggattatataattgtgactgtttttccattgaaaaaaagtgtttaggg 47980099  T
Q  116 ggtgttcggattatataat 134  Q
    ||||||| |||| ||||||    
T  47980100 ggtgttcagattctataat 47980118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 50716417 - 50716300
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||  |||||||||||||||||| |||||||| ||||| ||||   ||||||||||| ||| |||||| | ||||||||| | | |||||||    
T  50716417 aaaatgactattcatgttacaaacatgtttagaatttgtgctgatacagttcagattatataatccgaattgttttac-cttgaaaaagggtgtttaggg 50716319  T
Q  116 ggtgttcggattatataat 134  Q
    ||| | |||||||| ||||    
T  50716318 ggtttccggattatgtaat 50716300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 50796430 - 50796547
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||  |||||||||||||||||| |||||||| ||||| ||||   ||||||||||| ||| |||||| | ||||||||| | | |||||||    
T  50796430 aaaatgactattcatgttacaaacatgtttagaatttgtgctgatacagttcagattatataatccgaattgttttac-cttgaaaaagggtgtttaggg 50796528  T
Q  116 ggtgttcggattatataat 134  Q
    ||| | |||||||| ||||    
T  50796529 ggtttccggattatgtaat 50796547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 164 - 232
Target Start/End: Original strand, 2358810 - 2358879
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatcc-gaaaatttcaagggcatttttg 232  Q
    ||||||||||||||||||||||||||| | | ||||||||||||||| | |||  |||||||||||||||    
T  2358810 ttttcaccctataacaaaggaaaacaccattccggattatgaaatccgggaaacctcaagggcatttttg 2358879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 26053515 - 26053584
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaac 85  Q
    ||||||| |||| | |||| ||||||||||| |||||||||||||| |||||| ||||||||||| ||||    
T  26053515 aaaatgactatccaagttataaacatgtttagaatttgtgttgatacagtttggattatataatcagaac 26053584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 29035879 - 29035802
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttc 93  Q
    ||||||| |||| |||||||||||||||| | ||||||| || ||| | || ||||||||||||| ||||||||||||    
T  29035879 aaaatgactatccatgttacaaacatgttcagaatttgtattcatacaattcgaattatataatccgaactgtttttc 29035802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 134
Target Start/End: Original strand, 47739927 - 47740043
Alignment:
Q  17 aaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttagggg 116  Q
    |||||| ||||||||||||||||||||||| |||||||| ||||| ||||   |||||||||||  |||  |||| | ||||||||| | | ||||||||    
T  47739927 aaatgactatctatgttacaaacatgtttagaatttgtgctgatacagttcagattatataatcaaaacaattttac-cttgaaaaagggtgtttagggg 47740025  T
Q  117 gtgttcggattatataat 134  Q
    || | |||||||| ||||    
T  47740026 gtttccggattatgtaat 47740043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 232
Target Start/End: Complemental strand, 48303963 - 48303895
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttg 232  Q
    |||||||||| |||||||||||||||| | | |||||||||||||| | |||  |||||||||||||||    
T  48303963 ttttcaccctttaacaaaggaaaacaccattccggattatgaaatctggaaacctcaagggcatttttg 48303895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 232
Target Start/End: Complemental strand, 51258375 - 51258307
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttg 232  Q
    |||||||||| |||||||||||||||| | | |||||||||||||||  ||| ||||||| ||||||||    
T  51258375 ttttcaccctttaacaaaggaaaacacaattccggattatgaaatccagaaacttcaaggacatttttg 51258307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 3352060 - 3352135
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttt 91  Q
    ||||||| |||| |||||||||||||||||| |||||||| ||||| ||||   ||||||||||  ||||||||||    
T  3352060 aaaatgactatccatgttacaaacatgtttagaatttgtgctgatacagttcagattatataattcgaactgtttt 3352135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 3902993 - 3903040
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccg 211  Q
    ||||||||||||||||||||||||||| | | ||||||||||||||||    
T  3902993 ttttcaccctataacaaaggaaaacaccattccggattatgaaatccg 3903040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 27143418 - 27143520
Alignment:
Q  24 tatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttagggggtgttcg 123  Q
    |||| |||||||||||||||| | |||||||| ||||| || |   |||||||||| ||||||||||||| ||||||||| | | ||||| ||||||| |    
T  27143418 tatccatgttacaaacatgttcagaatttgtgctgatacagatcagattatataatttgaactgtttttc-cttgaaaaagggtgtttagagggtgtttg 27143516  T
Q  124 gatt 127  Q
    ||||    
T  27143517 gatt 27143520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 33438686 - 33438611
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttt 91  Q
    ||||||| |||| || ||||||||||||||| |||||||| ||||| ||||   ||||||||||| ||||||||||    
T  33438686 aaaatgactatccatattacaaacatgtttagaatttgtgctgatacagttcagattatataatccgaactgtttt 33438611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 48 - 91
Target Start/End: Original strand, 54229923 - 54229966
Alignment:
Q  48 aatttgtgttgatatagtttgaattatataatctgaactgtttt 91  Q
    |||||||||||||| |||||||||||||||||| ||||||||||    
T  54229923 aatttgtgttgatacagtttgaattatataatccgaactgtttt 54229966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 164 - 230
Target Start/End: Original strand, 54230164 - 54230230
Alignment:
Q  164 ttttcaccctataacaaaggaaaacact-agttcggattatgaaatccgaaaatttcaagggcatttt 230  Q
    ||||||||| |||||||||||||| ||| |||||||||| | |||||||||||| |||||||||||||    
T  54230164 ttttcaccccataacaaaggaaaa-actcagttcggattttaaaatccgaaaatctcaagggcatttt 54230230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 29035964 - 29035886
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgat-atagtttgaattatataatctgaactgtttttc 93  Q
    |||||||||||| |||||||||||||| ||| ||||||||||||| | ||||   ||||||||||  ||||||||||||    
T  29035964 aaaatgattatccatgttacaaacatgcttagaatttgtgttgataacagttcagattatataattcgaactgtttttc 29035886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 166 - 236
Target Start/End: Complemental strand, 29048308 - 29048238
Alignment:
Q  166 ttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttggaag 236  Q
    ||||||| ||||||||||||||   ||||||||||| | |||||| |||||| |||| |||||||||||||    
T  29048308 ttcaccccataacaaaggaaaaacttagttcggattttaaaatccaaaaattacaagtgcatttttggaag 29048238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 47123191 - 47123141
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtt 66  Q
    |||||||||||| |||||||||||||||||| |||||||| ||||| ||||    
T  47123191 aaaatgattatccatgttacaaacatgtttagaatttgtgctgatacagtt 47123141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 232
Target Start/End: Complemental strand, 3937360 - 3937292
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttg 232  Q
    |||||| |||||||||||||||||||| | |  ||||||| ||||||| |||  |||||||||||||||    
T  3937360 ttttcatcctataacaaaggaaaacaccattctggattataaaatccggaaacctcaagggcatttttg 3937292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 215
Target Start/End: Complemental strand, 8735143 - 8735092
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaa 215  Q
    |||||||||| |||||||||||||||| | | || |||||||||||||||||    
T  8735143 ttttcaccctttaacaaaggaaaacaccattccgaattatgaaatccgaaaa 8735092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 215
Target Start/End: Complemental strand, 9087384 - 9087333
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaa 215  Q
    |||||||||| |||||||||||||||| | | || |||||||||||||||||    
T  9087384 ttttcaccctttaacaaaggaaaacaccattccgaattatgaaatccgaaaa 9087333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 42937132 - 42937203
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttggaa 235  Q
    |||||||||| ||||||||| ||| || | ||||||||||||||| |||||| ||||| |  ||||||||||    
T  42937132 ttttcaccctttaacaaagggaaataccatttcggattatgaaattcgaaaacttcaaagatatttttggaa 42937203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 118
Target Start/End: Original strand, 46622801 - 46622879
Alignment:
Q  39 catgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttagggggt 118  Q
    |||||||| |||||||| ||||| |||| | ||||||||||| |||||||||| || |||||||| | | ||||||||||    
T  46622801 catgtttagaatttgtgctgatacagttcggattatataatccgaactgttttact-ttgaaaaatggtgtttagggggt 46622879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 14828913 - 14829029
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||| |||||| |||||| |||||| |||| |||||| ||| ||||| || | |||||||||||  |||| |||||| ||| ||||| | ||||| |||    
T  14828913 aaaattattatccatgttataaacatatttagaatttgcgttaatatatttcggattatataatccaaactttttttc-cttaaaaaaggctattt-ggg 14829010  T
Q  116 ggtgttcggattatataat 134  Q
     ||||||||||| ||||||    
T  14829011 agtgttcggattctataat 14829029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 47130557 - 47130507
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtt 66  Q
    ||||||||| || |||||||||||||||||| |||||||| ||||| ||||    
T  47130557 aaaatgattgtccatgttacaaacatgtttagaatttgtgctgatacagtt 47130507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 291
Target Start/End: Complemental strand, 36401886 - 36401841
Alignment:
Q  246 tagggtgcgcgaggaaatgaatagggtgagaaaagtaatagtcaaa 291  Q
    ||||| ||||||||||| | ||| ||||||||||||||||||||||    
T  36401886 tagggcgcgcgaggaaaggcataaggtgagaaaagtaatagtcaaa 36401841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 8735558 - 8735514
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgat 60  Q
    ||||||| |||| |||||||||||||||| |||||| ||||||||    
T  8735558 aaaatgactatcaatgttacaaacatgttcataattggtgttgat 8735514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 9087799 - 9087755
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgat 60  Q
    ||||||| |||| |||||||||||||||| |||||| ||||||||    
T  9087799 aaaatgactatcaatgttacaaacatgttcataattggtgttgat 9087755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 32024942 - 32024878
Alignment:
Q  166 ttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttt 230  Q
    |||||||||||| |||||||||||  |||||| ||| | |||||||||||| |||| | ||||||    
T  32024942 ttcaccctataataaaggaaaacatcagttcgaattttaaaatccgaaaatctcaaagacatttt 32024878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 50716224 - 50716180
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaat 208  Q
    |||||||||||||||||||||||| || | | |||||||||||||    
T  50716224 ttttcaccctataacaaaggaaaataccattccggattatgaaat 50716180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 50796623 - 50796667
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaat 208  Q
    |||||||||||||||||||||||| || | | |||||||||||||    
T  50796623 ttttcaccctataacaaaggaaaataccattccggattatgaaat 50796667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 4e-27; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 41203175 - 41203293
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||||||||||||||||| |||||||| ||||| |||| |  ||||||||||||||||||||||||||| ||||| | | |||| ||    
T  41203175 aaaatgactatccatgttacaaacatgtttaaaatttgtgctgatacagttcggtttatataatctgaactgtttttctctttaaaaagggtgtttacgg 41203274  T
Q  116 ggtgttcggattatataat 134  Q
    |||||||||||||| ||||    
T  41203275 ggtgttcggattatgtaat 41203293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 5507584 - 5507466
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||||||||||||||||| |||||||| ||||| |||| | ||||||||||| ||||| |||||  ||| | ||||| | |||||||    
T  5507584 aaaatgactatccatgttacaaacatgtttagaatttgtgctgatacagttcggattatataatccgaactattttttccttaagaaaaggtgtttaggg 5507485  T
Q  116 ggtgttcggattatataat 134  Q
    |||||||||||||||||||    
T  5507484 ggtgttcggattatataat 5507466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 164 - 232
Target Start/End: Complemental strand, 5507388 - 5507320
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttg 232  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  5507388 ttttcaccatataacaaaggaaaacactagttcggattatgaaacccgaaaacttcaagggcatttttg 5507320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 34517073 - 34517002
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttggaa 235  Q
    |||||||| |||||||||||||||||| |||||||| ||||||||||||||| ||||| |||||||||||||    
T  34517073 ttttcaccgtataacaaaggaaaacaccagttcggaatatgaaatccgaaaacttcaaaggcatttttggaa 34517002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 15995102 - 15995219
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||||||||||||||||| ||||| || ||||| |||| ||||||||||||| |||||| ||||  ||||||||| | | |||||||    
T  15995102 aaaatgactatccatgttacaaacatgtttagaatttttgctgatacagttcgaattatataatccgaactg-ttttagcttgaaaaagggtgtttaggg 15995200  T
Q  116 ggtgttcggattatataat 134  Q
    ||| |||||||||| ||||    
T  15995201 ggttttcggattatgtaat 15995219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 45153780 - 45153897
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| ||||||||||||||||||||| ||||| ||||| ||||  ||||||||||||| ||||||||| | ||||||||| | | |||||||    
T  45153780 aaaatgactatccatgttacaaacatgtttataacttgtgctgatacagttcaaattatataatctaaactgttttac-cttgaaaaagggtgtttaggg 45153878  T
Q  116 ggtgttcggattatataat 134  Q
    ||| | |||||||| ||||    
T  45153879 ggtttccggattatgtaat 45153897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 39447327 - 39447252
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttt 91  Q
    ||||||| |||| |||||||||||||||||| |||||||| ||||| |||||||||||||||||| ||||| ||||    
T  39447327 aaaatgactatccatgttacaaacatgtttagaatttgtgctgatacagtttgaattatataatccgaactatttt 39447252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 33452432 - 33452544
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    |||||||||||| |||||||||||||||||| |||||||| | ||| |||| | ||||||||||| |||||||||| | ||||||||| | | |||||||    
T  33452432 aaaatgattatccatgttacaaacatgtttagaatttgtgctaatacagttcggattatataatccgaactgttttac-cttgaaaaagggtgtttaggg 33452530  T
Q  116 ggtgttcggattat 129  Q
     || | ||||||||    
T  33452531 agtttccggattat 33452544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 17474788 - 17474905
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||||||||||||||||| |||||||| ||||| |||| | |||||||||||  ||||||||| | |||||||||   | |||||||    
T  17474788 aaaatgactatccatgttacaaacatgtttaaaatttgtgctgatacagttcggattatataatccaaactgttttac-cttgaaaaattgtgtttaggg 17474886  T
Q  116 ggtgttcggattatataat 134  Q
    ||| | |||||||| ||||    
T  17474887 ggtttccggattatgtaat 17474905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 19110004 - 19110121
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    |||||||  ||| |||||||||| || |||| |||||||| |||||||||||| ||||||||||| ||||  |||||| ||||||||| | | |||||||    
T  19110004 aaaatgacgatccatgttacaaagatatttaaaatttgtgctgatatagtttggattatataatc-gaacaatttttcccttgaaaaagggtgtttaggg 19110102  T
Q  116 ggtgttcggattatataat 134  Q
    |||| || |||| ||||||    
T  19110103 ggtgatcagattctataat 19110121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 32187858 - 32187975
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| ||||||||||||| |||| |||||||| ||||| |||| | ||||||||||| |||||||||| | ||||||||| | | ||| |||    
T  32187858 aaaatgactatccatgttacaaacatatttaaaatttgtgctgatacagttcggattatataatccgaactgttttac-cttgaaaaatggtgtttcggg 32187956  T
Q  116 ggtgttcggattatataat 134  Q
    ||| | |||||||| ||||    
T  32187957 ggtttccggattatgtaat 32187975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 34517266 - 34517148
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||||||  ||||||||| |||||||| ||||| |||| | |||||||||||  ||||||||||| ||||||||| | | |||| ||    
T  34517266 aaaatgactatccatgttaccgacatgtttagaatttgtgctgatacagttcggattatataatccaaactgtttttcccttgaaaaatggtgtttaagg 34517167  T
Q  116 ggtgttcggattatataat 134  Q
    ||| || ||||||| ||||    
T  34517166 ggtatttggattatgtaat 34517148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 42894542 - 42894425
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    |||||||||||| |||||| ||||||||||| |||||||| ||||| |||| | | ||||||||| | |||||||| | ||||||||| | | |||||||    
T  42894542 aaaatgattatccatgttagaaacatgtttagaatttgtgctgatacagttcggaatatataatccggactgttttac-cttgaaaaatggtgtttaggg 42894444  T
Q  116 ggtgttcggattatataat 134  Q
    ||| | |||||||| ||||    
T  42894443 ggtttccggattatgtaat 42894425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 164 - 232
Target Start/End: Complemental strand, 25715335 - 25715267
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttg 232  Q
    |||||||||| |||||||||||||||| | | |||||||| ||||||| ||| ||||||||||||||||    
T  25715335 ttttcaccctttaacaaaggaaaacaccattccggattataaaatccggaaacttcaagggcatttttg 25715267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 35 - 134
Target Start/End: Complemental strand, 30763789 - 30763691
Alignment:
Q  35 caaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttagggggtgttcggattatataat 134  Q
    |||| ||||||| ||||| |||||||| | |||| | ||||||||| ||||||||||||| |||||||| | | ||||  ||||||||||||||||||||    
T  30763789 caaaaatgtttagaatttatgttgatacaatttggaatatataatcagaactgtttttcttttgaaaaatggtgttta-agggtgttcggattatataat 30763691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 29 - 134
Target Start/End: Complemental strand, 8388803 - 8388698
Alignment:
Q  29 atgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaaga-tatttagggggtgttcggatt 127  Q
    ||||||||||||| |||| |||||||| ||||| | || | | ||||||||||||||||||||| || | |||||||| | |||| |||||||| |||||    
T  8388803 atgttacaaacatctttagaatttgtgctgatacatttcggactatataatctgaactgttttt-tccttaaaaaagagtgtttaaggggtgttaggatt 8388705  T
Q  128 atataat 134  Q
    |||||||    
T  8388704 atataat 8388698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 32 - 118
Target Start/End: Original strand, 41854904 - 41854989
Alignment:
Q  32 ttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttagggggt 118  Q
    ||||||||||||||| |||||||| ||||| ||||  |||||||||||| |||||||||| | ||||||||| | | ||||||||||    
T  41854904 ttacaaacatgtttagaatttgtgctgatacagttcaaattatataatccgaactgttttac-cttgaaaaagggtgtttagggggt 41854989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 16 - 118
Target Start/End: Original strand, 44465716 - 44465817
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| || | |||||||||||||||||| |||||||| ||||| | || | ||||||||||| |||||||||| | ||||||||| | | |||||||    
T  44465716 aaaatgactaaccatgttacaaacatgtttagaatttgtgctgatacatttcggattatataatccgaactgttttac-cttgaaaaagggtgtttaggg 44465814  T
Q  116 ggt 118  Q
    |||    
T  44465815 ggt 44465817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 37 - 134
Target Start/End: Complemental strand, 33833899 - 33833802
Alignment:
Q  37 aacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttagggggtgttcggattatataat 134  Q
    |||||| | |||||||||| ||||| |||| | ||||||||||||||||||||||||   | || || | | ||||||||||||||||||| ||||||    
T  33833899 aacatgctcataatttgtgatgatacagttcggattatataatctgaactgtttttccactaaataacggtgtttagggggtgttcggattctataat 33833802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 38066662 - 38066748
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaa 102  Q
    ||||||| |||| || |||||||||| |||| |||||||||| |||  ||| |  ||||||||| ||||||||||||| ||||||||    
T  38066662 aaaatgactatccattttacaaacatatttagaatttgtgttaatactgttcggtttatataatatgaactgtttttcccttgaaaa 38066748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 164 - 209
Target Start/End: Original strand, 36949127 - 36949172
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatc 209  Q
    ||||||||||||||||||||||||||| | | ||||||||||||||    
T  36949127 ttttcaccctataacaaaggaaaacaccattccggattatgaaatc 36949172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 36875150 - 36875075
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttt 91  Q
    ||||||| |||| ||||||||||| |||||| ||||| || | ||| |||||| ||||||||||| | ||||||||    
T  36875150 aaaatgactatccatgttacaaacttgtttagaatttatgctaatacagtttggattatataatccggactgtttt 36875075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 234
Target Start/End: Original strand, 15995296 - 15995365
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttgga 234  Q
    |||||||||| ||||||| |||||||| | | |||||||| |||||||||||  | |||||||||||||||    
T  15995296 ttttcaccctttaacaaaagaaaacaccattccggattataaaatccgaaaa-ctaaagggcatttttgga 15995365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 70 - 134
Target Start/End: Original strand, 27900675 - 27900739
Alignment:
Q  70 attatataatctgaactgtttttctcttgaaaaaagatatttagggggtgttcggattatataat 134  Q
    ||||||||||| |||||||||||| | |||| || | | ||||||||||||||| ||| ||||||    
T  27900675 attatataatccgaactgtttttcccctgaagaagggtgtttagggggtgttcgaattttataat 27900739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 2e-22; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 24604355 - 24604473
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| ||||| ||||||||| ||||||| |||||||| ||||| ||||   |||||||||| ||||||||||||| ||||||||| | | |||| ||    
T  24604355 aaaatgactatctttgttacaaatatgtttagaatttgtgctgatagagttcagattatataatatgaactgtttttcccttgaaaaatggtgtttaagg 24604454  T
Q  116 ggtgttcggattatataat 134  Q
    |||||||||||||| ||||    
T  24604455 ggtgttcggattatgtaat 24604473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 7734334 - 7734406
Alignment:
Q  30 tgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaa 102  Q
    ||||||||||||||||| ||||||| |||||| |||| |||||||||||||||||||||||||  ||||||||    
T  7734334 tgttacaaacatgtttagaatttgtattgatacagttcgaattatataatctgaactgttttttccttgaaaa 7734406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 164 - 231
Target Start/End: Original strand, 24604550 - 24604617
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcattttt 231  Q
    |||||||||||| |||||||||||||| |||||||| ||||||||||||||| ||||||| |||||||    
T  24604550 ttttcaccctatgacaaaggaaaacaccagttcggaatatgaaatccgaaaacttcaaggacattttt 24604617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 24 - 134
Target Start/End: Original strand, 29289627 - 29289738
Alignment:
Q  24 tatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaa-gatatttagggggtgttc 122  Q
    ||||||||||||||| ||||| |||||||||| ||||| ||||   ||||||||||| ||| |||||||| |||||||||| | | |||| |||||||||    
T  29289627 tatctatgttacaaagatgttcataatttgtgctgatacagttcagattatataatccgaattgtttttcacttgaaaaaatggtgtttaaggggtgttc 29289726  T
Q  123 ggattatataat 134  Q
     |||||||||||    
T  29289727 agattatataat 29289738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 4508296 - 4508413
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| || ||||||||||||||| |||||||| ||||| ||||   ||||||||||| |||||||||| | ||||||||||| | |||||||    
T  4508296 aaaatgactatccatattacaaacatgtttagaatttgtgctgatacagttcagattatataatccgaactgttttac-cttgaaaaaagttgtttaggg 4508394  T
Q  116 ggtgttcggattatataat 134  Q
    | | | |||||||||||||    
T  4508395 gatttccggattatataat 4508413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 23406961 - 23406844
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||||||||||||||||| |||||||| ||||| |||| | ||||||||||  |||||||||| | ||||||||| | | |||||||    
T  23406961 aaaatgactatccatgttacaaacatgtttagaatttgtgctgatacagttcggattatataattcgaactgttttac-cttgaaaaatggtgtttaggg 23406863  T
Q  116 ggtgttcggattatataat 134  Q
    ||| | |||||||| ||||    
T  23406862 ggtttccggattatgtaat 23406844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 5638851 - 5638780
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttggaa 235  Q
    |||||||||||||||| |||||||||| | | |||||||||||||||| |||  ||||||||||||||||||    
T  5638851 ttttcaccctataacagaggaaaacaccattccggattatgaaatccggaaacctcaagggcatttttggaa 5638780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 33413533 - 33413604
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttggaa 235  Q
    ||||||||||||||||||||||||||| | | |||||||||||||||| |||  |||| |||||||||||||    
T  33413533 ttttcaccctataacaaaggaaaacaccattccggattatgaaatccggaaacatcaaaggcatttttggaa 33413604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 1945524 - 1945640
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||||||||||||||||| ||||||||  |||| |||| | ||||||||||||||| || ||||| ||||||||| |   |||| ||    
T  1945524 aaaatgactatccatgttacaaacatgtttagaatttgtgccgatacagttcggattatataatctgaattg-ttttcacttgaaaaatggggttta-gg 1945621  T
Q  116 ggtgttcggattatataat 134  Q
    ||||||| |||||||||||    
T  1945622 ggtgttcagattatataat 1945640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 236959 - 236899
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatat 76  Q
    ||||||||| || |||||||||||||||| |||||||||| |||||||||| |||||||||    
T  236959 aaaatgattttccatgttacaaacatgttcataatttgtgctgatatagttcgaattatat 236899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 3717277 - 3717352
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttt 91  Q
    ||||||| |||| |||||||| ||||||||| |||||||| ||||| |||| | ||||||||||| ||||||||||    
T  3717277 aaaatgactatccatgttacagacatgtttagaatttgtgatgatacagttcggattatataatccgaactgtttt 3717352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 2539616 - 2539515
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||||||||||||||| | ||||||||  |||| |||| | ||||||||||| |||||||||| | ||||||||| | | |||||||    
T  2539616 aaaatgactatccatgttacaaacatgttcagaatttgtgcggatagagttcggattatataatccgaactgttttac-cttgaaaaagggtgtttaggg 2539518  T
Q  116 ggt 118  Q
    |||    
T  2539517 ggt 2539515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 13801021 - 13801138
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    |||||||| |||||||||||||||||||||| ||||| || | ||| ||||   ||||| ||||| |||||||| ||  |||| |||| | | |||| ||    
T  13801021 aaaatgataatctatgttacaaacatgtttagaatttatgctaatacagttccgattatgtaatccgaactgttctttccttg-aaaagggtgtttaagg 13801119  T
Q  116 ggtgttcggattatataat 134  Q
    |||||||||||||||||||    
T  13801120 ggtgttcggattatataat 13801138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 16 - 118
Target Start/End: Original strand, 14587554 - 14587655
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||||||||||||||||| ||||||||  |||| ||||   ||||||||||| |||||||||| | ||||||||| | | |||||||    
T  14587554 aaaatgactatccatgttacaaacatgtttagaatttgtgccgatacagttatgattatataatccgaactgttttac-cttgaaaaatggtgtttaggg 14587652  T
Q  116 ggt 118  Q
    |||    
T  14587653 ggt 14587655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 5699730 - 5699662
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaa 84  Q
    ||||||| |||| ||||||||||||| |||| |||||||||| ||| |||| | |||||||||||||||    
T  5699730 aaaatgactatccatgttacaaacatatttagaatttgtgttaatacagttcggattatataatctgaa 5699662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 5699530 - 5699483
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccg 211  Q
    ||||||||||||||||||||||||||| | | ||||||||||||||||    
T  5699530 ttttcaccctataacaaaggaaaacaccattccggattatgaaatccg 5699483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 9905279 - 9905233
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatat 62  Q
    |||||||||||| |||||||||||||||||| |||||||| ||||||    
T  9905279 aaaatgattatccatgttacaaacatgtttaaaatttgtgctgatat 9905233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 17264575 - 17264458
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| || | ||||| |||||||||||| |||||||| ||||| ||||   ||||||||||| ||||| |||| | ||||||||| | | |||||||    
T  17264575 aaaatgactaaccatgttgcaaacatgtttagaatttgtgctgatacagttcagattatataatccgaactattttac-cttgaaaaagggtgtttaggg 17264477  T
Q  116 ggtgttcggattatataat 134  Q
    ||| | |||||||| ||||    
T  17264476 ggtttccggattatgtaat 17264458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 232
Target Start/End: Complemental strand, 23406768 - 23406701
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttg 232  Q
    ||||||||||||||||||||||||||| | | ||||||| |||||||| |||  |||| ||||||||||    
T  23406768 ttttcaccctataacaaaggaaaacaccattccggattacgaaatccggaaa-atcaatggcatttttg 23406701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 91
Target Start/End: Complemental strand, 5639015 - 5638952
Alignment:
Q  28 tatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttt 91  Q
    ||||||||| |||||||||| || |||| ||||| |||| | ||||||||||| ||||||||||    
T  5639015 tatgttacagacatgtttatgatatgtgctgatacagttcggattatataatccgaactgtttt 5638952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 246 - 288
Target Start/End: Original strand, 16396394 - 16396436
Alignment:
Q  246 tagggtgcgcgaggaaatgaatagggtgagaaaagtaatagtc 288  Q
    ||||| ||||||||||||| |||||||| ||||||||||||||    
T  16396394 tagggcgcgcgaggaaatgcatagggtgggaaaagtaatagtc 16396436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 29519431 - 29519374
Alignment:
Q  29 atgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaact 86  Q
    |||||||||||||||||| |||||||| ||||| ||||   ||||||||||| |||||    
T  29519431 atgttacaaacatgtttagaatttgtgctgatacagttcatattatataatccgaact 29519374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 34528604 - 34528555
Alignment:
Q  17 aaatgattatctatgttacaaacatgtttataatttgtgttgatatagtt 66  Q
    |||||| |||| |||||||||||||||| |||||||||| ||||| ||||    
T  34528604 aaatgaatatccatgttacaaacatgttcataatttgtgctgatacagtt 34528555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 70 - 134
Target Start/End: Original strand, 10310449 - 10310513
Alignment:
Q  70 attatataatctgaactgtttttctcttgaaaaaagatatttagggggtgttcggattatataat 134  Q
    ||||||||||| |||||||||||  | |||| || | | ||||||||||||||||||| ||||||    
T  10310449 attatataatccgaactgttttttccctgaataagggtgtttagggggtgttcggattctataat 10310513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 14038093 - 14038164
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttggaag 236  Q
    ||||||||| ||||||||||||||   ||||||||||| | |||| |  |||| |||||||||||||||||||    
T  14038093 ttttcaccc-ataacaaaggaaaatcttagttcggattctaaaattcataaatctcaagggcatttttggaag 14038164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 1e-17; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 118
Target Start/End: Original strand, 27927935 - 27928036
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||||||||||||||||| |||||||| ||||| |||| | ||||||||||| |||||||||| | ||||||||| | | |||||||    
T  27927935 aaaatgactatccatgttacaaacatgtttagaatttgtgctgatacagttcggattatataatccgaactgttttac-cttgaaaaatggtgtttaggg 27928033  T
Q  116 ggt 118  Q
    |||    
T  27928034 ggt 27928036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 40994957 - 40994840
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||||||||||||||||| |||||||| ||||| |||| | ||||||||||| |||||||||| | ||||| ||| | | |||||||    
T  40994957 aaaatgactatccatgttacaaacatgtttagaatttgtgctgatacagttcggattatataatccgaactgttttac-cttgataaagggtgtttaggg 40994859  T
Q  116 ggtgttcggattatataat 134  Q
    ||| ||| |||||| ||||    
T  40994858 ggttttcagattatgtaat 40994840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 134
Target Start/End: Complemental strand, 44106386 - 44106271
Alignment:
Q  18 aatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggggg 117  Q
    ||||| |||| |||||||||||||||||| |||||||| ||||| ||||   ||||||||||| |||||||||| | ||||||||| | | |||||||||    
T  44106386 aatgactatccatgttacaaacatgtttagaatttgtgctgatacagttcagattatataatccgaactgttttac-cttgaaaaagggtgtttaggggg 44106288  T
Q  118 tgttcggattatataat 134  Q
    | | |||||||| ||||    
T  44106287 tttccggattatgtaat 44106271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 3094850 - 3094729
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgt---ttttctcttgaaaaaagatattta 112  Q
    |||||||||||| |||||||||||||||||| |||||||| ||||| ||||   ||||||||||| |||||||   ||||  ||||||||| | | ||||    
T  3094850 aaaatgattatccatgttacaaacatgtttagaatttgtgctgatacagttcagattatataatcggaactgtttgttttaccttgaaaaatggtgttta 3094751  T
Q  113 gggggtgttcggattatataat 134  Q
    |||||| | |||||||| ||||    
T  3094750 gggggtttccggattatgtaat 3094729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 16310764 - 16310689
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttt 91  Q
    ||||||| |||  |||||||||||||||||| |||||||| |||||||||| | |||||||||| |||||||||||    
T  16310764 aaaatgactattcatgttacaaacatgtttagaatttgtgctgatatagttcggattatataatttgaactgtttt 16310689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 40392701 - 40392586
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||||||||||||||||| |||||||| ||||| |||    ||||||||||| |||||||||||| ||||||||  | | || || |    
T  40392701 aaaatgactatccatgttacaaacatgtttagaatttgtgctgatacagtacagattatataatccgaactgtttttcccttgaaaacgggtgttcagag 40392602  T
Q  116 ggtgttcggattatat 131  Q
     |||||||||||||||    
T  40392601 agtgttcggattatat 40392586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 4259629 - 4259747
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||||||||||||| ||| |||||||| ||||| ||||   ||||||||||| ||| | |||||| ||||||||| | | |||||||    
T  4259629 aaaatgactatcaatgttacaaacatgcttagaatttgtgctgatacagttcagattatataatccgaattatttttcccttgaaaaatggtgtttaggg 4259728  T
Q  116 ggtgttcggattatataat 134  Q
    |||| ||  ||||||||||    
T  4259729 ggtgctcaaattatataat 4259747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 8885447 - 8885564
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||||||||||||||||| |||||||| ||||| ||||   ||||||||||| |||||||||| | ||||||||  | | |||||||    
T  8885447 aaaatgactatccatgttacaaacatgtttagaatttgtgctgatacagttcagattatataatccgaactgttttac-cttgaaaatgggtgtttaggg 8885545  T
Q  116 ggtgttcggattatataat 134  Q
    ||| | |||||||| ||||    
T  8885546 ggtttccggattatgtaat 8885564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 42280885 - 42281002
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||  |||||||||||||||||| |||||||| ||||| ||||   ||||||||||| |||||||||| | ||||||||| | | |||||||    
T  42280885 aaaatgactatgcatgttacaaacatgtttaaaatttgtgctgatacagttcagattatataatccgaactgttttac-cttgaaaaagggtgtttaggg 42280983  T
Q  116 ggtgttcggattatataat 134  Q
    ||| | |||||||| ||||    
T  42280984 ggtttccggattatgtaat 42281002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 164 - 232
Target Start/End: Complemental strand, 21004362 - 21004294
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttg 232  Q
    ||||||||||||||||||||||||||| | | |||||||||||||| | |||  |||||||||||||||    
T  21004362 ttttcaccctataacaaaggaaaacaccattccggattatgaaatctggaaacctcaagggcatttttg 21004294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 34853493 - 34853418
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttt 91  Q
    ||||||| |||| ||||||||||||| |||| |||||||| ||||| |||||| ||||||||||| | ||||||||    
T  34853493 aaaatgactatccatgttacaaacatttttagaatttgtgctgatacagtttggattatataatccggactgtttt 34853418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 134
Target Start/End: Complemental strand, 1076707 - 1076604
Alignment:
Q  29 atgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttagggggtgttcggatta 128  Q
    |||||||||||||||||| |||||||| | ||| | || | |||||||||  ||||||||||||| |||||||| |  | |||| |||||||||||||||    
T  1076707 atgttacaaacatgtttaaaatttgtgct-atacaattcggattatataaattgaactgtttttcccttgaaaataagtgttta-ggggtgttcggatta 1076610  T
Q  129 tataat 134  Q
    ||||||    
T  1076609 tataat 1076604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 1374089 - 1373986
Alignment:
Q  32 ttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttagggggtgttcggattatat 131  Q
    ||||||||||| |||||||||||| |||||||||| | |||| |||||| ||| |||||||| | | || || | | ||||||| ||||||| ||| |||    
T  1374089 ttacaaacatgcttataatttgtgatgatatagttcggattacataatccgaattgtttttcccataaataagggtgtttagggagtgttcgaattttat 1373990  T
Q  132 aatt 135  Q
    ||||    
T  1373989 aatt 1373986  T

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Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 14164051 - 14164126
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttt 91  Q
    ||||||| |||| |||||||||||||||||| |||||||| ||||| | ||   ||||||||||| ||||||||||    
T  14164051 aaaatgactatccatgttacaaacatgtttagaatttgtgctgatacatttcagattatataatccgaactgtttt 14164126  T

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Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 36980734 - 36980687
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatata 63  Q
    |||||||||||| |||||||||||||||| |||||||||| |||||||    
T  36980734 aaaatgattatccatgttacaaacatgttcataatttgtgctgatata 36980687  T

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Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 9073669 - 9073568
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||||||||||||||||| |||||||| | ||| |||| |  |||||||||| ||||| |||  || |||||||||| | |||||||    
T  9073669 aaaatgactatccatgttacaaacatgtttagaatttgtgctaatacagttcgggttatataatccgaactatttcact-ttgaaaaaaggtgtttaggg 9073571  T
Q  116 ggt 118  Q
    |||    
T  9073570 ggt 9073568  T

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Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 28916940 - 28916874
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctg 82  Q
    ||||||| |||| |||| ||||||||||||| |||||||| ||||| |||| | |||||||||||||    
T  28916940 aaaatgactatccatgtaacaaacatgtttagaatttgtgctgatacagttcggattatataatctg 28916874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 86
Target Start/End: Original strand, 36165840 - 36165902
Alignment:
Q  24 tatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaact 86  Q
    |||| |||||||||||||||||| |||||||| ||||| |||| | ||||||||||| |||||    
T  36165840 tatccatgttacaaacatgtttacaatttgtgctgatacagttcggattatataatccgaact 36165902  T

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Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 11698310 - 11698383
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtt 89  Q
    ||||||| |||| |||||| ||||||| ||| ||||| || ||||| |||| ||||||||||||| ||||||||    
T  11698310 aaaatgactatccatgttaaaaacatgcttagaatttctgctgatacagttcgaattatataatccgaactgtt 11698383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 133
Target Start/End: Original strand, 17119873 - 17119990
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    |||||||  ||| ||||||||||||| |||| |||||||| ||||| | ||   ||||||||||| |||||| |||||   ||||||| | | |||| ||    
T  17119873 aaaatgacaatccatgttacaaacatatttagaatttgtgctgatacaattcagattatataatccgaactggttttccaatgaaaaatggtgtttaagg 17119972  T
Q  116 ggtgttcggattatataa 133  Q
    ||||||| ||||||||||    
T  17119973 ggtgttcagattatataa 17119990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 232
Target Start/End: Complemental strand, 37248530 - 37248463
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttg 232  Q
    ||||||||||||||||||||||||||| | |  ||||| ||||||||| |||  |||||||||||||||    
T  37248530 ttttcaccctataacaaaggaaaacaccattctggattttgaaatccggaaa-ctcaagggcatttttg 37248463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 41530637 - 41530569
Alignment:
Q  168 caccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttggaag 236  Q
    |||||| |||||||||||||||  | | |||||||| ||||||  ||| ||||||||||||||||||||    
T  41530637 caccctttaacaaaggaaaacatcattccggattataaaatccagaaacttcaagggcatttttggaag 41530569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 33472443 - 33472372
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactg 87  Q
    ||||||| |||| |||||||||||||||| | |||| ||| ||||  |||||| ||||| ||||||||||||    
T  33472443 aaaatgactatccatgttacaaacatgttcagaattggtgatgatgcagtttggattatgtaatctgaactg 33472372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 37248723 - 37248622
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||| ||||||||||||| |||||||| ||||| | || | ||||||||||   ||||||||| | ||||||||| | | |||||||    
T  37248723 aaaatgactatccatgtaacaaacatgtttagaatttgtgctgatacaattcggattatataattcaaactgttttac-cttgaaaaatggtgtttaggg 37248625  T
Q  116 ggt 118  Q
    |||    
T  37248624 ggt 37248622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 7971184 - 7971256
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccgaaaatttcaagggcatttttggaag 236  Q
    ||||||||||||||| ||||||||| | | |   |||||||||||| | |||  |||||||||||||||||||    
T  7971184 ttttcaccctataacgaaggaaaacgccattctagattatgaaatctggaaacctcaagggcatttttggaag 7971256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 7981539 - 7981468
Alignment:
Q  164 ttttcaccctataacaaaggaaaacact-agttcggattatgaaatccgaaaatttcaagggcatttttggaa 235  Q
    ||||||||||||| |||||||||| ||| |||||  ||| | ||||||||||||  |||||||||||||||||    
T  7981539 ttttcaccctatagcaaaggaaaa-actcagttcaaattctaaaatccgaaaatcacaagggcatttttggaa 7981468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 39093666 - 39093598
Alignment:
Q  23 ttatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttt 91  Q
    |||| ||||||||||||||| ||||||||| |||||||| | ||   ||||||||||| ||||| ||||    
T  39093666 ttatgtatgttacaaacatgcttataatttatgttgatacatttcagattatataatccgaactatttt 39093598  T

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Target: scaffold0137 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 9491 - 9608
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| ||||||||||||||| || ||||| || ||||| |||| | ||||||||||| |||||||||| || |||||||| | | || ||||    
T  9491 aaaatgactatccatgttacaaacatgtatagaatttatgctgatacagttcggattatataatccgaactgttttact-ttgaaaaagggtgttcaggg 9589  T
Q  116 ggtgttcggattatataat 134  Q
    ||| |||||||||| ||||    
T  9590 ggttttcggattatgtaat 9608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 9684 - 9731
Alignment:
Q  164 ttttcaccctataacaaaggaaaacactagttcggattatgaaatccg 211  Q
    ||||||||||||||||||||||||||| | | || |||||||||||||    
T  9684 ttttcaccctataacaaaggaaaacacaattccgaattatgaaatccg 9731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 141957 - 142074
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    ||||||| |||| |||||||||||||||||| |||||||| ||||| |||| | |||||||||||| |||  |||| | ||||||||| | | |||||||    
T  141957 aaaatgactatccatgttacaaacatgtttagaatttgtgctgatacagttcggattatataatctcaacaattttac-cttgaaaaagggtgtttaggg 142055  T
Q  116 ggtgttcggattatataat 134  Q
    ||| | |||||||| ||||    
T  142056 ggtttccggattatgtaat 142074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 3389 - 3506
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttctcttgaaaaaagatatttaggg 115  Q
    |||||||||||| |||||||||||||||||| |||||| |  |||| ||||   ||||||||||| |||||||||| | ||||||||| | | |||| ||    
T  3389 aaaatgattatcgatgttacaaacatgtttagaatttgcgccgatacagttcagattatataatccgaactgttttac-cttgaaaaagggtgtttatgg 3487  T
Q  116 ggtgttcggattatataat 134  Q
    ||| | |||||||| ||||    
T  3488 ggtttccggattatgtaat 3506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 100919 - 100984
Alignment:
Q  28 tatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatctgaactgtttttc 93  Q
    ||||||| ||||||||| | ||| |||   |||| || ||||||||||||||||||||||||||||    
T  100919 tatgttataaacatgttcaaaatctgtaccgatacaggttgaattatataatctgaactgtttttc 100984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 59964 - 60029
Alignment:
Q  16 aaaatgattatctatgttacaaacatgtttataatttgtgttgatatagtttgaattatataatct 81  Q
    ||||||| ||||||||||||||||||||| | |||||||| || || ||||   ||||||||||||    
T  59964 aaaatgactatctatgttacaaacatgttcaaaatttgtgctggtacagttcatattatataatct 60029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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