View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20775_high_23 (Length: 409)

Name: NF20775_high_23
Description: NF20775
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20775_high_23
NF20775_high_23
[»] chr3 (3 HSPs)
chr3 (23-401)||(290501-290877)
chr3 (242-331)||(280207-280296)
chr3 (137-189)||(8354176-8354228)
[»] chr2 (9 HSPs)
chr2 (82-401)||(24525553-24525872)
chr2 (82-401)||(24532225-24532543)
chr2 (135-189)||(42436450-42436504)
chr2 (137-189)||(1979988-1980040)
chr2 (137-189)||(4789262-4789314)
chr2 (139-187)||(16107393-16107441)
chr2 (142-189)||(106466-106512)
chr2 (159-189)||(16549969-16549999)
chr2 (128-189)||(3829243-3829304)
[»] chr7 (3 HSPs)
chr7 (122-224)||(6015774-6015876)
chr7 (142-224)||(13316515-13316596)
chr7 (144-189)||(17257432-17257476)
[»] chr1 (5 HSPs)
chr1 (122-224)||(12252506-12252608)
chr1 (129-189)||(18172642-18172701)
chr1 (137-224)||(18547889-18547976)
chr1 (139-187)||(2981105-2981153)
chr1 (136-190)||(29101796-29101850)
[»] chr4 (3 HSPs)
chr4 (115-189)||(4442126-4442200)
chr4 (143-209)||(10266447-10266511)
chr4 (143-209)||(10285472-10285536)
[»] chr8 (2 HSPs)
chr8 (116-224)||(11405858-11405965)
chr8 (137-189)||(26588155-26588207)
[»] chr6 (3 HSPs)
chr6 (137-189)||(7732693-7732745)
chr6 (139-187)||(24585721-24585769)
chr6 (137-187)||(5090494-5090544)
[»] chr5 (2 HSPs)
chr5 (137-189)||(14460178-14460230)
chr5 (142-189)||(29286097-29286143)


Alignment Details
Target: chr3 (Bit Score: 320; Significance: 1e-180; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 23 - 401
Target Start/End: Complemental strand, 290877 - 290501
Alignment:
Q  23 atatatattgttaatgattgattggtagcatacatacatagtgattgattgctaactacattccatattaaggtgtctacatttttctaattatttttct 122  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||||||||| |||||||||||||||    
T  290877 atatatattgttaatgattgattggtaacatacatacatagtgattgattgctaacta--ttcgatattaaggtgtctacatttctctaattatttttct 290780  T
Q  123 taaagataacggtgtcatcattttattggttataaatttatatatttttgtataaatatttatgatatgcaaccttgatcccacttaacggaatttctgg 222  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||    
T  290779 taaagataacggtgtcatcattttattggttataaatttatatatttttgtataaatattcatgatatgcaaccttgatcccacttaacgaaatttttgg 290680  T
Q  223 attcattgctgactatgttgacagacacattgaaagggccttcacctagacccagttcttcaaacaagaccaacgtgtttacatctttatttaagaatgg 322  Q
    |||| ||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  290679 attcgttgctaactatgtcgacagacacattgaaagggccttcacctagacccagctcttcaaacaagaccaacgtgtttacatctttatttaagaatgg 290580  T
Q  323 ccttggcactgcgtaaaatctaaaagatgaattttcaccaatccaataccttccgatactttgaccgttaacctatgct 401  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  290579 ccttggcactgcgtaaaacctaaaagatgaattttcaccaatccaataccttccgatactttgaccgttaacccatgct 290501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 242 - 331
Target Start/End: Complemental strand, 280296 - 280207
Alignment:
Q  242 gacagacacattgaaagggccttcacctagacccagttcttcaaacaagaccaacgtgtttacatctttatttaagaatggccttggcac 331  Q
    ||||||| |||||||||||  | || | | ||||| ||| |||||||| ||||||||||||||||| ||||||||||||| |||||||||    
T  280296 gacagacgcattgaaaggggttgcatcaaaacccatttcctcaaacaaaaccaacgtgtttacatcattatttaagaatgaccttggcac 280207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 8354228 - 8354176
Alignment:
Q  137 tcatcattttattggttataaatttatatatttttgtataaatatttatgata 189  Q
    ||||||||||| |||||||   ||||||||||||||| |||||||||||||||    
T  8354228 tcatcattttaatggttatggttttatatatttttgtttaaatatttatgata 8354176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 177; Significance: 3e-95; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 82 - 401
Target Start/End: Complemental strand, 24525872 - 24525553
Alignment:
Q  82 attccatattaaggtgtctacatttttctaattatttttcttaaagataacggtgtcatcattttattggttataaatttatatat-ttttgtataaata 180  Q
    |||| |||||||||||||||||||| |||||||||||| | || | |||| ||||||||||||| ||||||||| ||||||| ||| |||| ||||||||    
T  24525872 attcgatattaaggtgtctacatttctctaattattttgcatagacataatggtgtcatcattt-attggttatgaatttatgtatattttttataaata 24525774  T
Q  181 tttatgatatgcaaccttgatcccacttaacggaatttctggattcattgctgactatgttgacagacacattgaaagggccttcacctagacccagttc 280  Q
    || |||||  |||||||||||||||||||||  |||||||||||||  |||||| ||||| ||||||||||||||||||||||||||| ||||||| |||    
T  24525773 ttcatgatgagcaaccttgatcccacttaacaaaatttctggattcgatgctgattatgtcgacagacacattgaaagggccttcacccagacccaattc 24525674  T
Q  281 ttcaaacaagaccaacgtgtttacatctttatttaagaatggccttggcactgcgtaaaatctaaaagatgaattttcaccaatccaataccttccgata 380  Q
     |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||| |  ||||||||| |||    
T  24525673 ctcaaacaagaccaatgtgtttacatctttattaaagaatggccttggcactgcgtaatacctaaaagatgaattttcaccaagctgataccttccaata 24525574  T
Q  381 ctttgaccgttaacctatgct 401  Q
    |||||||| |||||| |||||    
T  24525573 ctttgaccattaacccatgct 24525553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 82 - 401
Target Start/End: Complemental strand, 24532543 - 24532225
Alignment:
Q  82 attccatattaaggtgtctacatttttctaattatttttcttaaagataacggtgtcatcattttattggttataaatttatatatttttgtataaatat 181  Q
    |||| |||||||||||||||||||| ||||||| |||| | || | |||| ||||||||||||| ||||||||| ||||||| ||||| |||||||||||    
T  24532543 attcgatattaaggtgtctacatttctctaattgttttgcatagacataatggtgtcatcattt-attggttatgaatttatgtatttctgtataaatat 24532445  T
Q  182 ttatgatatgcaaccttgatcccacttaacggaatttctggattcattgctgactatgttgacagacacattgaaagggccttcacctagacccagttct 281  Q
    | |||||  |||||||||||||||||||||  |||||||||||||  |||||| ||||| ||||||||||||||||||||||| ||| ||||||| |||     
T  24532444 tcatgatgagcaaccttgatcccacttaacaaaatttctggattcgatgctgattatgtcgacagacacattgaaagggcctttacccagacccaattcc 24532345  T
Q  282 tcaaacaagaccaacgtgtttacatctttatttaagaatggccttggcactgcgtaaaatctaaaagatgaattttcaccaatccaataccttccgatac 381  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||| || ||||||||| ||||    
T  24532344 tcaaacaagaccaatgtgtttacatctttattaaagaatggccttggcactgcgtaatacctaaaagatgaattttcaccaagccgataccttccaatac 24532245  T
Q  382 tttgaccgttaacctatgct 401  Q
     |||||| |||||| |||||    
T  24532244 attgaccattaacccatgct 24532225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 135 - 189
Target Start/End: Original strand, 42436450 - 42436504
Alignment:
Q  135 tgtcatcattttattggttataaatttatatatttttgtataaatatttatgata 189  Q
    ||||||||||||||| |||||||||||| |||||||| || ||||||||||||||    
T  42436450 tgtcatcattttatttgttataaatttacatatttttctagaaatatttatgata 42436504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 1979988 - 1980040
Alignment:
Q  137 tcatcattttattggttataaatttatatatttttgtataaatatttatgata 189  Q
    ||||||||||| ||||||| | ||||||||||||||| |||||||||||||||    
T  1979988 tcatcattttaatggttatgattttatatatttttgtttaaatatttatgata 1980040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 4789314 - 4789262
Alignment:
Q  137 tcatcattttattggttataaatttatatatttttgtataaatatttatgata 189  Q
    ||||||||||| |||||||   ||||||||||||||| |||||||||||||||    
T  4789314 tcatcattttaatggttatggttttatatatttttgtttaaatatttatgata 4789262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 187
Target Start/End: Complemental strand, 16107441 - 16107393
Alignment:
Q  139 atcattttattggttataaatttatatatttttgtataaatatttatga 187  Q
    ||||||||| |||||||   |||||||||||||||||||||||||||||    
T  16107441 atcattttaatggttatggttttatatatttttgtataaatatttatga 16107393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 142 - 189
Target Start/End: Original strand, 106466 - 106512
Alignment:
Q  142 attttattggttataaatttatatatttttgtataaatatttatgata 189  Q
    |||||||| |||||||||||||||| ||||||||||||||||| ||||    
T  106466 attttattagttataaatttatata-ttttgtataaatatttaagata 106512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 189
Target Start/End: Complemental strand, 16549999 - 16549969
Alignment:
Q  159 tttatatatttttgtataaatatttatgata 189  Q
    |||||||||||||||||||||||||||||||    
T  16549999 tttatatatttttgtataaatatttatgata 16549969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 189
Target Start/End: Complemental strand, 3829304 - 3829243
Alignment:
Q  128 ataacggtgtcatcattttattggttataaatttatatatttttgtataaatatttatgata 189  Q
    |||| |||||||| |||||||| ||||| |||||| || |||||||| || |||||||||||    
T  3829304 ataatggtgtcataattttatttgttatgaatttaaatgtttttgtaaaactatttatgata 3829243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 2e-22; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 122 - 224
Target Start/End: Original strand, 6015774 - 6015876
Alignment:
Q  122 ttaaagataacggtgtcatcattttattggttataaatttatatatttttgtataaatatttatgatatgcaaccttgatcccacttaacggaatttctg 221  Q
    |||| ||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||  |||| ||||||||  | ||||||||    
T  6015774 ttaatgataatgatgtcatcgttttattggttataaatttatatatttttgtataaatatttatgataaacaattttgaccccacttattgaaatttctg 6015873  T
Q  222 gat 224  Q
    |||    
T  6015874 gat 6015876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 224
Target Start/End: Original strand, 13316515 - 13316596
Alignment:
Q  142 attttattggttataaatttatatatttttgtataaatatttatgatatgcaaccttgatcccacttaacggaatttctggat 224  Q
    |||||||| ||||||||||| |||| ||||||||||||||||| ||||  |||  |||| ||||||||  | |||||||||||    
T  13316515 attttattagttataaatttgtata-ttttgtataaatatttaagataaacaatattgaccccacttattgaaatttctggat 13316596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 189
Target Start/End: Complemental strand, 17257476 - 17257432
Alignment:
Q  144 tttattggttataaatttatatatttttgtataaatatttatgata 189  Q
    |||||| ||||||||||||||||||||| |||||| ||||||||||    
T  17257476 tttattagttataaatttatatattttt-tataaacatttatgata 17257432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 2e-22; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 122 - 224
Target Start/End: Original strand, 12252506 - 12252608
Alignment:
Q  122 ttaaagataacggtgtcatcattttattggttataaatttatatatttttgtataaatatttatgatatgcaaccttgatcccacttaacggaatttctg 221  Q
    |||| ||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||  |||| ||||||||  | ||||||||    
T  12252506 ttaatgataatgatgtcatcgttttattggttataaatttatatatttttgtataaatatttatgataaacaattttgaccccacttattgaaatttctg 12252605  T
Q  222 gat 224  Q
    |||    
T  12252606 gat 12252608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 129 - 189
Target Start/End: Original strand, 18172642 - 18172701
Alignment:
Q  129 taacggtgtcatcattttattggttataaatttatatatttttgtataaatatttatgata 189  Q
    ||||| |||| || |||||||||||||||||||||||| |||||||||||||||| |||||    
T  18172642 taacgatgtcttctttttattggttataaatttatata-ttttgtataaatatttttgata 18172701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 224
Target Start/End: Complemental strand, 18547976 - 18547889
Alignment:
Q  137 tcatcattttattggttataaatttatatatttttgtataaatatttatgatatgcaaccttgatcccacttaacggaatttctggat 224  Q
    ||||||||||| |||||||   ||||||||||||||| |||||||||||||||  | | ||||| ||||||| | | |||||||||||    
T  18547976 tcatcattttaatggttatggttttatatatttttgtttaaatatttatgataaacgatcttgaccccactttatgaaatttctggat 18547889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 187
Target Start/End: Original strand, 2981105 - 2981153
Alignment:
Q  139 atcattttattggttataaatttatatatttttgtataaatatttatga 187  Q
    ||||||||| |||||||   |||||||||||||||||||||||||||||    
T  2981105 atcattttaatggttatggttttatatatttttgtataaatatttatga 2981153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 190
Target Start/End: Complemental strand, 29101850 - 29101796
Alignment:
Q  136 gtcatcattttattggttataaatttatatatttttgtataaatatttatgatat 190  Q
    ||||||||||||| | |||||||||||||||| ||| ||| ||||||||| ||||    
T  29101850 gtcatcattttatcgtttataaatttatatatatttttattaatatttataatat 29101796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 115 - 189
Target Start/End: Complemental strand, 4442200 - 4442126
Alignment:
Q  115 atttttcttaaagataacggtgtcatcattttattggttataaatttatatatttttgtataaatatttatgata 189  Q
    ||||||||||| ||||| | || ||| ||||| ||||||||| |||||||| ||||||| |||||||||||||||    
T  4442200 atttttcttaatgataatgatgccattatttttttggttatagatttatatttttttgtttaaatatttatgata 4442126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 143 - 209
Target Start/End: Complemental strand, 10266511 - 10266447
Alignment:
Q  143 ttttattggttataaatttatatatttttgtataaatatttatgatatgcaaccttgatcccactta 209  Q
    |||||||||||||||||||| || |||||  ||||||||||||||||  | | ||||||||||||||    
T  10266511 ttttattggttataaatttaaatgttttt--ataaatatttatgataaacgatcttgatcccactta 10266447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 143 - 209
Target Start/End: Complemental strand, 10285536 - 10285472
Alignment:
Q  143 ttttattggttataaatttatatatttttgtataaatatttatgatatgcaaccttgatcccactta 209  Q
    ||||||||||||| |||||| ||||||||  ||||||||||||||||  | | ||||||||||||||    
T  10285536 ttttattggttatgaatttaaatattttt--ataaatatttatgataaacgatcttgatcccactta 10285472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 224
Target Start/End: Original strand, 11405858 - 11405965
Alignment:
Q  116 tttttcttaaagataacggtgtcatcattttattggttataaatttatatatttttgtataaatatttatgatatgcaaccttgatcccacttaacggaa 215  Q
    ||||| |||| ||||| | ||||||||||||||| |||||||||||| |||||||| || ||||||||| ||||   ||| |||| ||||||||  | ||    
T  11405858 tttttgttaatgataatgatgtcatcattttatttgttataaatttacatattttt-tagaaatatttaagataaataactttgaccccacttattgaaa 11405956  T
Q  216 tttctggat 224  Q
    |||||||||    
T  11405957 tttctggat 11405965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 26588207 - 26588155
Alignment:
Q  137 tcatcattttattggttataaatttatatatttttgtataaatatttatgata 189  Q
    ||||||||||| ||||||| | ||||||||||||||| |||||||||||||||    
T  26588207 tcatcattttaatggttatgattttatatatttttgtttaaatatttatgata 26588155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000009; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 7732745 - 7732693
Alignment:
Q  137 tcatcattttattggttataaatttatatatttttgtataaatatttatgata 189  Q
    ||||||||||| ||||||| | ||||||||||||||| |||||||||||||||    
T  7732745 tcatcattttaatggttatgattttatatatttttgtttaaatatttatgata 7732693  T

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Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 187
Target Start/End: Complemental strand, 24585769 - 24585721
Alignment:
Q  139 atcattttattggttataaatttatatatttttgtataaatatttatga 187  Q
    ||||||||| |||||||   |||||||||||||||||||||||||||||    
T  24585769 atcattttaatggttatggttttatatatttttgtataaatatttatga 24585721  T

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Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 187
Target Start/End: Complemental strand, 5090544 - 5090494
Alignment:
Q  137 tcatcattttattggttataaatttatatatttttgtataaatatttatga 187  Q
    ||||||||||||| ||||| |||| ||| ||||||||| ||||||||||||    
T  5090544 tcatcattttatttgttatgaattcatagatttttgtaaaaatatttatga 5090494  T

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Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 14460230 - 14460178
Alignment:
Q  137 tcatcattttattggttataaatttatatatttttgtataaatatttatgata 189  Q
    ||||||||||| |||||||   ||||||||||||||| |||||||||||||||    
T  14460230 tcatcattttaatggttatggttttatatatttttgtttaaatatttatgata 14460178  T

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Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 142 - 189
Target Start/End: Complemental strand, 29286143 - 29286097
Alignment:
Q  142 attttattggttataaatttatatatttttgtataaatatttatgata 189  Q
    |||||||| |||||||||||||||| ||||||||||||||||| ||||    
T  29286143 attttattagttataaatttatata-ttttgtataaatatttaagata 29286097  T

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