View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20775_low_36 (Length: 319)

Name: NF20775_low_36
Description: NF20775
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20775_low_36
NF20775_low_36
[»] chr5 (27 HSPs)
chr5 (198-319)||(41334637-41334758)
chr5 (198-319)||(2614623-2614744)
chr5 (198-319)||(18033987-18034108)
chr5 (198-319)||(22512310-22512431)
chr5 (212-319)||(7617138-7617245)
chr5 (197-319)||(5257000-5257122)
chr5 (198-319)||(33801474-33801595)
chr5 (206-319)||(38470584-38470697)
chr5 (197-316)||(39122406-39122524)
chr5 (225-319)||(32473395-32473489)
chr5 (198-319)||(25914970-25915082)
chr5 (249-319)||(33855068-33855138)
chr5 (225-319)||(17208079-17208173)
chr5 (225-319)||(30622720-30622813)
chr5 (62-103)||(10542299-10542340)
chr5 (197-237)||(39122329-39122369)
chr5 (62-103)||(5081469-5081510)
chr5 (66-103)||(21262854-21262891)
chr5 (67-103)||(13006670-13006706)
chr5 (67-103)||(13078689-13078725)
chr5 (67-103)||(20884032-20884068)
chr5 (67-103)||(20884284-20884320)
chr5 (67-103)||(22833651-22833687)
chr5 (67-103)||(29690715-29690751)
chr5 (67-103)||(29989463-29989499)
chr5 (66-102)||(34974252-34974288)
chr5 (62-98)||(36845497-36845533)
[»] chr6 (38 HSPs)
chr6 (198-319)||(7292752-7292873)
chr6 (198-319)||(9698307-9698428)
chr6 (198-319)||(13743195-13743316)
chr6 (198-319)||(13748695-13748816)
chr6 (198-319)||(26669983-26670104)
chr6 (198-319)||(24203961-24204082)
chr6 (198-319)||(26466804-26466925)
chr6 (198-319)||(7273309-7273430)
chr6 (198-319)||(30735987-30736108)
chr6 (198-319)||(7367554-7367675)
chr6 (198-319)||(21279934-21280055)
chr6 (198-319)||(30014348-30014469)
chr6 (198-319)||(3213405-3213526)
chr6 (198-319)||(21293651-21293772)
chr6 (1-67)||(8159628-8159694)
chr6 (225-319)||(27441547-27441641)
chr6 (5-67)||(8156601-8156662)
chr6 (225-319)||(31109223-31109317)
chr6 (225-319)||(33242408-33242502)
chr6 (225-319)||(33253918-33254012)
chr6 (64-103)||(22043519-22043558)
chr6 (53-103)||(2255613-2255663)
chr6 (65-103)||(13788038-13788076)
chr6 (65-103)||(13796657-13796695)
chr6 (66-103)||(6176690-6176727)
chr6 (58-103)||(6176942-6176987)
chr6 (66-103)||(9887902-9887939)
chr6 (66-99)||(10129840-10129873)
chr6 (66-103)||(15502778-15502815)
chr6 (66-103)||(19591550-19591587)
chr6 (62-99)||(26241270-26241307)
chr6 (66-103)||(28039144-28039181)
chr6 (63-103)||(2965567-2965607)
chr6 (67-103)||(2965822-2965858)
chr6 (63-103)||(4407863-4407903)
chr6 (67-103)||(14597343-14597379)
chr6 (59-103)||(25948621-25948665)
chr6 (67-103)||(27660373-27660409)
[»] chr3 (44 HSPs)
chr3 (198-319)||(36150135-36150256)
chr3 (197-319)||(54246121-54246243)
chr3 (198-319)||(54237101-54237222)
chr3 (197-319)||(27748568-27748690)
chr3 (198-319)||(24688376-24688497)
chr3 (198-319)||(25413686-25413807)
chr3 (198-319)||(40480754-40480875)
chr3 (198-319)||(40808870-40808991)
chr3 (198-319)||(42394393-42394514)
chr3 (198-319)||(53581832-53581953)
chr3 (198-319)||(46941058-46941179)
chr3 (197-319)||(45126901-45127023)
chr3 (198-319)||(42100693-42100814)
chr3 (197-319)||(47190999-47191120)
chr3 (197-309)||(51249323-51249435)
chr3 (201-282)||(52629870-52629951)
chr3 (198-319)||(53273658-53273779)
chr3 (225-319)||(4190266-4190360)
chr3 (225-319)||(9434129-9434223)
chr3 (222-319)||(29558232-29558329)
chr3 (225-319)||(10457893-10457987)
chr3 (209-312)||(11064707-11064810)
chr3 (198-319)||(1078232-1078344)
chr3 (236-319)||(25996273-25996356)
chr3 (225-316)||(51757601-51757692)
chr3 (225-319)||(34791834-34791928)
chr3 (225-319)||(52627978-52628072)
chr3 (230-281)||(19148822-19148873)
chr3 (62-101)||(52866212-52866251)
chr3 (65-103)||(24234257-24234295)
chr3 (66-103)||(3526789-3526826)
chr3 (66-103)||(7014727-7014764)
chr3 (66-103)||(9268823-9268860)
chr3 (66-103)||(25484114-25484151)
chr3 (66-103)||(33312585-33312622)
chr3 (66-103)||(40004125-40004162)
chr3 (67-103)||(5047417-5047453)
chr3 (67-103)||(6019648-6019684)
chr3 (66-102)||(8128137-8128173)
chr3 (67-103)||(9268572-9268608)
chr3 (59-103)||(25484367-25484411)
chr3 (66-102)||(40717610-40717646)
chr3 (67-103)||(53035869-53035905)
chr3 (67-103)||(54014556-54014592)
[»] chr8 (40 HSPs)
chr8 (198-319)||(11582771-11582892)
chr8 (198-319)||(36743457-36743578)
chr8 (198-319)||(30660716-30660837)
chr8 (198-319)||(42197409-42197530)
chr8 (198-319)||(29705367-29705488)
chr8 (198-319)||(45397321-45397442)
chr8 (197-319)||(29800923-29801045)
chr8 (198-319)||(26125640-26125760)
chr8 (201-316)||(31384672-31384787)
chr8 (198-316)||(2165937-2166055)
chr8 (197-319)||(42295200-42295321)
chr8 (198-319)||(30912536-30912657)
chr8 (198-319)||(2547001-2547122)
chr8 (198-319)||(5754908-5755029)
chr8 (198-319)||(20148765-20148886)
chr8 (198-316)||(1375550-1375668)
chr8 (198-282)||(9241594-9241678)
chr8 (228-319)||(42699262-42699353)
chr8 (198-308)||(3743787-3743897)
chr8 (197-315)||(40528607-40528726)
chr8 (225-319)||(35181521-35181615)
chr8 (225-319)||(34304793-34304887)
chr8 (225-319)||(18066719-18066813)
chr8 (225-319)||(33629994-33630088)
chr8 (231-319)||(16603633-16603721)
chr8 (230-319)||(16358839-16358929)
chr8 (66-103)||(36574653-36574690)
chr8 (63-103)||(28004635-28004675)
chr8 (63-103)||(28061937-28061977)
chr8 (64-103)||(17159107-17159146)
chr8 (280-319)||(19386626-19386665)
chr8 (225-283)||(10678153-10678211)
chr8 (66-103)||(18609268-18609305)
chr8 (66-103)||(21127320-21127357)
chr8 (62-99)||(28889021-28889058)
chr8 (222-275)||(32328815-32328868)
chr8 (67-103)||(116616-116652)
chr8 (67-103)||(10761178-10761214)
chr8 (67-103)||(17749860-17749896)
chr8 (63-99)||(34821664-34821700)
[»] chr7 (59 HSPs)
chr7 (198-319)||(24000986-24001107)
chr7 (198-319)||(42538405-42538526)
chr7 (197-319)||(5810897-5811019)
chr7 (198-319)||(41861679-41861802)
chr7 (198-319)||(5015400-5015521)
chr7 (198-319)||(26898376-26898497)
chr7 (198-319)||(35069726-35069847)
chr7 (198-319)||(42972857-42972978)
chr7 (198-319)||(43343598-43343719)
chr7 (198-319)||(44416908-44417029)
chr7 (197-319)||(10573754-10573876)
chr7 (198-319)||(4638173-4638294)
chr7 (198-319)||(44326183-44326304)
chr7 (200-308)||(27393236-27393344)
chr7 (198-315)||(32029791-32029908)
chr7 (206-318)||(45326026-45326138)
chr7 (197-319)||(5194204-5194326)
chr7 (198-319)||(16180331-16180451)
chr7 (197-319)||(43317448-43317570)
chr7 (210-319)||(9216307-9216415)
chr7 (199-319)||(24280571-24280691)
chr7 (198-301)||(38160553-38160656)
chr7 (236-319)||(40236924-40237007)
chr7 (225-319)||(31513292-31513386)
chr7 (225-319)||(31408634-31408728)
chr7 (225-319)||(27535232-27535326)
chr7 (39-102)||(24438909-24438972)
chr7 (225-319)||(33384875-33384970)
chr7 (257-319)||(39998413-39998475)
chr7 (62-103)||(22947617-22947658)
chr7 (62-103)||(47668122-47668163)
chr7 (63-103)||(31644190-31644230)
chr7 (51-99)||(42042923-42042971)
chr7 (62-102)||(43741973-43742013)
chr7 (57-99)||(3333044-3333086)
chr7 (53-103)||(9712644-9712694)
chr7 (65-103)||(20033913-20033951)
chr7 (65-103)||(23774948-23774986)
chr7 (61-103)||(28311355-28311397)
chr7 (57-103)||(38686779-38686825)
chr7 (66-103)||(24919919-24919956)
chr7 (66-103)||(31079360-31079397)
chr7 (59-100)||(34116471-34116512)
chr7 (66-103)||(37101561-37101598)
chr7 (66-103)||(38651782-38651819)
chr7 (62-103)||(41745083-41745124)
chr7 (66-103)||(46483872-46483909)
chr7 (63-99)||(813672-813708)
chr7 (66-102)||(3216047-3216083)
chr7 (63-103)||(7881411-7881451)
chr7 (67-103)||(11666755-11666791)
chr7 (67-103)||(15093707-15093743)
chr7 (67-103)||(16274468-16274504)
chr7 (67-103)||(17358254-17358290)
chr7 (67-103)||(30165473-30165509)
chr7 (67-103)||(31079109-31079145)
chr7 (65-101)||(38415894-38415930)
chr7 (67-103)||(43989043-43989079)
chr7 (59-103)||(48741833-48741877)
[»] chr2 (49 HSPs)
chr2 (198-319)||(1750419-1750540)
chr2 (198-319)||(19047162-19047283)
chr2 (203-319)||(12302232-12302348)
chr2 (198-319)||(30838637-30838758)
chr2 (198-319)||(43490375-43490496)
chr2 (211-319)||(16096752-16096860)
chr2 (198-319)||(4764700-4764821)
chr2 (198-319)||(43335737-43335858)
chr2 (197-319)||(13780708-13780830)
chr2 (197-319)||(8896556-8896678)
chr2 (197-319)||(34817749-34817871)
chr2 (198-282)||(42849833-42849916)
chr2 (225-319)||(43114562-43114656)
chr2 (225-319)||(11825655-11825749)
chr2 (225-319)||(41281975-41282069)
chr2 (201-319)||(42026772-42026892)
chr2 (225-319)||(12415461-12415555)
chr2 (225-319)||(12427521-12427615)
chr2 (225-319)||(16803973-16804067)
chr2 (225-319)||(16843255-16843349)
chr2 (230-315)||(33229310-33229396)
chr2 (212-282)||(39149280-39149350)
chr2 (225-318)||(34895742-34895835)
chr2 (231-319)||(18491710-18491798)
chr2 (225-319)||(966835-966929)
chr2 (239-319)||(6518484-6518563)
chr2 (242-309)||(14285691-14285758)
chr2 (225-282)||(4451951-4452008)
chr2 (239-319)||(4299435-4299515)
chr2 (235-319)||(7070421-7070505)
chr2 (59-99)||(27197735-27197775)
chr2 (59-99)||(27853162-27853202)
chr2 (64-103)||(44353898-44353937)
chr2 (62-103)||(5513477-5513518)
chr2 (66-103)||(5863184-5863221)
chr2 (66-103)||(12883080-12883117)
chr2 (58-103)||(20891845-20891890)
chr2 (66-103)||(20962042-20962079)
chr2 (62-103)||(20962294-20962335)
chr2 (66-103)||(23081044-23081081)
chr2 (67-103)||(1591827-1591863)
chr2 (67-103)||(2077043-2077079)
chr2 (67-103)||(2077293-2077329)
chr2 (67-103)||(5513733-5513769)
chr2 (67-103)||(5529174-5529210)
chr2 (67-103)||(8224388-8224424)
chr2 (67-103)||(27926932-27926968)
chr2 (67-103)||(36202119-36202155)
chr2 (67-103)||(39615833-39615869)
[»] chr1 (38 HSPs)
chr1 (198-319)||(5489781-5489902)
chr1 (198-319)||(43571060-43571181)
chr1 (197-319)||(23989496-23989619)
chr1 (198-319)||(48498936-48499057)
chr1 (198-319)||(7447831-7447951)
chr1 (198-319)||(24769473-24769594)
chr1 (198-319)||(37814783-37814904)
chr1 (198-319)||(750279-750400)
chr1 (207-315)||(4401336-4401445)
chr1 (198-319)||(50448234-50448355)
chr1 (206-319)||(2497544-2497657)
chr1 (225-319)||(44112682-44112776)
chr1 (225-319)||(48119633-48119727)
chr1 (207-274)||(4888093-4888160)
chr1 (225-319)||(35003299-35003393)
chr1 (225-319)||(38335923-38336017)
chr1 (225-319)||(41065158-41065252)
chr1 (225-319)||(46168388-46168482)
chr1 (225-319)||(45427746-45427840)
chr1 (231-319)||(38113202-38113290)
chr1 (225-319)||(45639733-45639827)
chr1 (225-319)||(35000114-35000208)
chr1 (225-319)||(45705830-45705924)
chr1 (64-103)||(22374558-22374597)
chr1 (55-102)||(23284930-23284977)
chr1 (64-102)||(1613587-1613625)
chr1 (277-319)||(14427352-14427394)
chr1 (61-103)||(17889516-17889558)
chr1 (67-101)||(22374814-22374848)
chr1 (64-102)||(37216491-37216529)
chr1 (64-102)||(40633339-40633377)
chr1 (66-103)||(12887003-12887040)
chr1 (67-103)||(163355-163391)
chr1 (67-103)||(1340933-1340969)
chr1 (67-103)||(1613843-1613879)
chr1 (67-103)||(1819333-1819369)
chr1 (67-103)||(11586479-11586515)
chr1 (67-103)||(45323437-45323473)
[»] scaffold0038 (1 HSPs)
scaffold0038 (198-319)||(112660-112781)
[»] scaffold0119 (1 HSPs)
scaffold0119 (198-319)||(690-811)
[»] scaffold0187 (2 HSPs)
scaffold0187 (198-319)||(14163-14283)
scaffold0187 (198-319)||(24491-24611)
[»] chr4 (49 HSPs)
chr4 (198-319)||(25051698-25051819)
chr4 (197-319)||(23204751-23204873)
chr4 (198-319)||(1771240-1771361)
chr4 (198-319)||(23035985-23036106)
chr4 (198-319)||(27550314-27550435)
chr4 (197-319)||(27893815-27893937)
chr4 (198-319)||(28982796-28982917)
chr4 (198-319)||(35017738-35017858)
chr4 (198-319)||(43514660-43514781)
chr4 (198-319)||(55966320-55966441)
chr4 (197-319)||(27864569-27864691)
chr4 (198-319)||(33703146-33703267)
chr4 (199-319)||(28988478-28988598)
chr4 (198-319)||(27316687-27316808)
chr4 (206-319)||(41878411-41878524)
chr4 (210-315)||(39631109-39631215)
chr4 (207-315)||(43949784-43949893)
chr4 (197-319)||(41327516-41327638)
chr4 (214-319)||(12496961-12497066)
chr4 (198-319)||(21687011-21687132)
chr4 (210-319)||(31680907-31681016)
chr4 (202-316)||(43735750-43735864)
chr4 (197-319)||(48463423-48463545)
chr4 (198-319)||(45490287-45490408)
chr4 (198-282)||(51512239-51512323)
chr4 (225-319)||(711965-712059)
chr4 (225-319)||(17619153-17619247)
chr4 (197-319)||(41847976-41848098)
chr4 (225-319)||(55272377-55272471)
chr4 (210-271)||(46412455-46412516)
chr4 (230-319)||(3756252-3756341)
chr4 (225-318)||(48435580-48435673)
chr4 (244-319)||(960890-960965)
chr4 (236-319)||(35037010-35037093)
chr4 (225-319)||(32728362-32728456)
chr4 (201-283)||(56215875-56215956)
chr4 (58-103)||(15323419-15323464)
chr4 (239-319)||(46827721-46827801)
chr4 (62-101)||(39534057-39534096)
chr4 (59-101)||(13168775-13168817)
chr4 (53-103)||(13578911-13578961)
chr4 (65-103)||(49626828-49626866)
chr4 (66-103)||(32645-32682)
chr4 (58-103)||(11347467-11347512)
chr4 (66-103)||(49633186-49633223)
chr4 (67-103)||(19675859-19675895)
chr4 (63-99)||(23943882-23943918)
chr4 (67-103)||(49236549-49236585)
chr4 (67-103)||(54442233-54442269)
[»] scaffold0385 (1 HSPs)
scaffold0385 (201-319)||(11256-11374)
[»] scaffold0157 (1 HSPs)
scaffold0157 (214-319)||(23411-23516)
[»] scaffold0003 (1 HSPs)
scaffold0003 (225-319)||(45720-45814)
[»] scaffold0100 (1 HSPs)
scaffold0100 (225-319)||(35457-35551)
[»] scaffold0420 (1 HSPs)
scaffold0420 (65-103)||(4495-4533)
[»] scaffold0744 (1 HSPs)
scaffold0744 (66-103)||(1521-1558)
[»] scaffold0009 (1 HSPs)
scaffold0009 (66-103)||(25015-25052)
[»] scaffold0473 (1 HSPs)
scaffold0473 (66-102)||(1869-1905)
[»] scaffold0235 (1 HSPs)
scaffold0235 (67-103)||(24190-24226)
[»] scaffold0098 (1 HSPs)
scaffold0098 (67-103)||(4210-4246)
[»] scaffold0037 (1 HSPs)
scaffold0037 (67-103)||(96694-96730)


Alignment Details
Target: chr5 (Bit Score: 118; Significance: 3e-60; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 41334637 - 41334758
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  41334637 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatgaggtgtatga 41334736  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||||||||||||||||||    
T  41334737 ataaagggtgttcatgtaacat 41334758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 2614623 - 2614744
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||    
T  2614623 gtggcaatctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtagga 2614722  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||||||||||||||||||    
T  2614723 ataaagggtgttcatgtaacat 2614744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 18034108 - 18033987
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| ||    
T  18034108 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggagtgtagga 18034009  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||||||||||||||||||    
T  18034008 ataaagggtgttcatgtaacat 18033987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 22512431 - 22512310
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||| ||||| ||    
T  22512431 gtggcaacttggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggagtgtacaatggagtgtagga 22512332  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||||||||||||||||||    
T  22512331 ataaagggtgttcatgtaacat 22512310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 212 - 319
Target Start/End: Complemental strand, 7617245 - 7617138
Alignment:
Q  212 cccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttca 311  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  7617245 cccacataaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtataatggagtgtatgaataaagggtgttca 7617146  T
Q  312 tgtaacat 319  Q
    ||||||||    
T  7617145 tgtaacat 7617138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 197 - 319
Target Start/End: Complemental strand, 5257122 - 5257000
Alignment:
Q  197 tgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatg 296  Q
    |||||||| || ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||| ||||||    
T  5257122 tgtggcaatcttgaccccacataaatagaagataaagtgtggttgtgagatgaaattaccaaaatatccctaatacatggggtgtacaatgggatgtatg 5257023  T
Q  297 aataaagggtgttcatgtaacat 319  Q
    |||||| |||||| |||||||||    
T  5257022 aataaatggtgtttatgtaacat 5257000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 33801595 - 33801474
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||| |||||||||||  |    
T  33801595 gtggcaacttggatcccacacaaatagaagataaagtgtggttgtgagatgaacttactaaaatatccctaatacatggagtgtacaatggggtgtagaa 33801496  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||| ||||||||||||||    
T  33801495 ataaaggatgttcatgtaacat 33801474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 206 - 319
Target Start/End: Complemental strand, 38470697 - 38470584
Alignment:
Q  206 ctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaaggg 305  Q
    |||||||||||| ||||||||||||||||||| |||||| ||||| |||||||||||||| |||||||| ||||||| |||||  |||||||||||||||    
T  38470697 ctggaccccacataaatagaagataaagtgtgattgtgaaatgaatttaccaaaatatccttaatacatggggtgtacaatggaatgtatgaataaaggg 38470598  T
Q  306 tgttcatgtaacat 319  Q
    |||| |||||||||    
T  38470597 tgtttatgtaacat 38470584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 197 - 316
Target Start/End: Original strand, 39122406 - 39122524
Alignment:
Q  197 tgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatg 296  Q
    |||||||||||  ||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||| |||||| ||||  | ||||||    
T  39122406 tgtggcaacctaaaccccacacaaatagaagataaagtgtagttgtgagatgaatttaccaaaatattcctaatacat-gggtgtctaattagatgtatg 39122504  T
Q  297 aataaagggtgttcatgtaa 316  Q
    |||||| |||||||||||||    
T  39122505 aataaaaggtgttcatgtaa 39122524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 225 - 319
Target Start/End: Original strand, 32473395 - 32473489
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||||| ||||||||||||||| ||||||||||||||||||| |||  |||||| |||  ||||||||| |||||||||||||||||||||    
T  32473395 aagagaaagtatggttgtgagatgaaattaccaaaatatccctaatgcatgtggtgtacaataaggtgtatgattaaagggtgttcatgtaacat 32473489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 25914970 - 25915082
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||||||||||||||||||||||||||||||||        || |||||||||| ||| ||||||| | |||||||| ||||||| |||| |||||| ||    
T  25914970 gtggcaacctggaccccacacaaatagaagata--------ttatgagatgaacctacaaaaatattc-taatacattgggtgtacaatgaggtgtagga 25915060  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||||||||||||||||||    
T  25915061 ataaagggtgttcatgtaacat 25915082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 249 - 319
Target Start/End: Original strand, 33855068 - 33855138
Alignment:
Q  249 aacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    ||||||||||||| | |||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||    
T  33855068 aacttaccaaaatgttcctaatacatggggtgtacaatggggtgtaggaataaagggtgttcatgtaacat 33855138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 319
Target Start/End: Complemental strand, 17208173 - 17208079
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||||| ||||||||||||||| |||||||||| ||| |||| ||| ||||||| |||   |||||||| ||||||||||||| |||||||    
T  17208173 aagagaaagtatggttgtgagatgaatttaccaaaatgtccttaatgcatggggtgtacaataaagtgtatgattaaagggtgttcacgtaacat 17208079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 225 - 319
Target Start/End: Original strand, 30622720 - 30622813
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||||| |||||||||||| || |||||||||||||| |||| ||| |||  || ||| |||||||||| |||||| ||||||||||||||    
T  30622720 aagagaaagtatggttgtgagataaatttaccaaaatatccttaatgcat-gggcttacaatagggtgtatgattaaaggatgttcatgtaacat 30622813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 10542340 - 10542299
Alignment:
Q  62 atttaagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    ||||||||||||||||||||||||| | ||||||||||||||    
T  10542340 atttaagggttaatagtgtttttcacccctgtaatatatgtc 10542299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 237
Target Start/End: Original strand, 39122329 - 39122369
Alignment:
Q  197 tgtggcaacctggaccccacacaaatagaagataaagtgtg 237  Q
    |||||||||||  ||||||||||||||||||||||||||||    
T  39122329 tgtggcaacctaaaccccacacaaatagaagataaagtgtg 39122369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 103
Target Start/End: Original strand, 5081469 - 5081510
Alignment:
Q  62 atttaagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||| |||||| | ||||||||||||||    
T  5081469 atttaagggttaatagtgcttttcacccctgtaatatatgtc 5081510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 21262891 - 21262854
Alignment:
Q  66 aagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  21262891 aagggttaatagtgtttttcacccctgtaatatatgtc 21262854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 13006706 - 13006670
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||| | ||||||||||||||    
T  13006706 agggttaatagtgtttttcacccctgtaatatatgtc 13006670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 13078725 - 13078689
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||| | ||||||||||||||    
T  13078725 agggttaatagtgtttttcacccctgtaatatatgtc 13078689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 20884032 - 20884068
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||| | ||||||||||||||    
T  20884032 agggttaatagtgtttttcacccctgtaatatatgtc 20884068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 20884320 - 20884284
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  20884320 agggttaatagtgcttttcaaccctgtaatatatgtc 20884284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 22833687 - 22833651
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||| | ||||||||||||||    
T  22833687 agggttaatagtgtttttcacccctgtaatatatgtc 22833651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 29690751 - 29690715
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||| | ||||||||||||||    
T  29690751 agggttaatagtgtttttcacccctgtaatatatgtc 29690715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 29989463 - 29989499
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||| | ||||||||||||||    
T  29989463 agggttaatagtgtttttcacccctgtaatatatgtc 29989499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 102
Target Start/End: Complemental strand, 34974288 - 34974252
Alignment:
Q  66 aagggttaatagtgtttttcaacgctgtaatatatgt 102  Q
    ||||||||||||||||||||| | |||||||||||||    
T  34974288 aagggttaatagtgtttttcatccctgtaatatatgt 34974252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 98
Target Start/End: Complemental strand, 36845533 - 36845497
Alignment:
Q  62 atttaagggttaatagtgtttttcaacgctgtaatat 98  Q
    ||||||||||||||||||||||||| | |||||||||    
T  36845533 atttaagggttaatagtgtttttcacctctgtaatat 36845497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 110; Significance: 2e-55; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 7292873 - 7292752
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  7292873 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatgaggtgtatga 7292774  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||| ||||||| ||||||||    
T  7292773 ataaatggtgttcttgtaacat 7292752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 9698307 - 9698428
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||    
T  9698307 gtggcaatctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtagga 9698406  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||||||||||||||||||    
T  9698407 ataaagggtgttcatgtaacat 9698428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 13743195 - 13743316
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| || |||||||    
T  13743195 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaattggatgtatga 13743294  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||| ||||||||||||||||    
T  13743295 ataaaaggtgttcatgtaacat 13743316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 13748695 - 13748816
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| || |||||||    
T  13748695 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaattggatgtatga 13748794  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||| ||||||||||||||||    
T  13748795 ataaaaggtgttcatgtaacat 13748816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 26669983 - 26670104
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||| |||||| ||    
T  26669983 gtggcaacctggactccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtagga 26670082  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||||||||||||||||||    
T  26670083 ataaagggtgttcatgtaacat 26670104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 24203961 - 24204082
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||| ||||||| ||    
T  24203961 gtggcaacttggaccccacacaaatagaatataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggagtgtacaatagggtgtagga 24204060  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||| ||||||||||||||||    
T  24204061 ataaatggtgttcatgtaacat 24204082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 26466925 - 26466804
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||| ||||||||||| ||    
T  26466925 gtggcaacctgaaccccaaacaaatagaagataaagtgtggttgtgagatgaacttaccaaaataaccctaatacatggagtgtacaatggggtgtagga 26466826  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    |||||||||||| |||||||||    
T  26466825 ataaagggtgtttatgtaacat 26466804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 7273309 - 7273430
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||| |||  |||||| ||    
T  7273309 gtggcaacttggaccccacataaatagaagataaagtgtgattgtgagatgaacttaccaaaatatctctaatacatggggtgtacaataaggtgtagga 7273408  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||||||||||||||||||    
T  7273409 ataaagggtgttcatgtaacat 7273430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 30736108 - 30735987
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||  |||||| ||||||||||| ||    
T  30736108 gtggcaacctggaccccacataaatagaagataaagtgtgattgtgagatgaacttaccaaaatatcactaatacatgaggtgtacaatggggtgtagga 30736009  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    |||||  |||||||||||||||    
T  30736008 ataaaaagtgttcatgtaacat 30735987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 7367675 - 7367554
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    ||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||| |||||||||    
T  7367675 gtggcaacctggatcccacataaatagaaaataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtgtatga 7367576  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||| | ||||||| ||||||    
T  7367575 ataaatgatgttcatataacat 7367554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 21280055 - 21279934
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||  |||||  ||||  |    
T  21280055 gtggcaacttggaccccacacaaatagaagataaagtgtggttgtgagatgaatttaccaaaatatccctaatacatgggatgtgcaatggaatgtagaa 21279956  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||||||||||||||||||    
T  21279955 ataaagggtgttcatgtaacat 21279934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 30014469 - 30014348
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||| ||| ||||||||| | |||||||||||||||| |||||||||||||||||||||||||||| |||||||||| || ||||||||||| |||| ||    
T  30014469 gtggtaacttggaccccatataaatagaagataaagtatggttgtgagatgaacttaccaaaatatgcctaatacatgggatgtataatgggatgtagga 30014370  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||||||||||||||||||    
T  30014369 ataaagggtgttcatgtaacat 30014348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 3213526 - 3213405
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    ||||||| |||||||||||| |||||||||||||||| ||||||||| ||||| |||||||||||||| |||||||| ||||||| |||| | |||||||    
T  3213526 gtggcaatctggaccccacataaatagaagataaagtatggttgtgaaatgaatttaccaaaatatccttaatacatggggtgtacaatgagatgtatga 3213427  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    |||||||||||| |||||||||    
T  3213426 ataaagggtgtttatgtaacat 3213405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 21293651 - 21293772
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||| |||||||| ||||||| | ||   |||||||    
T  21293651 gtggcaatctggaccccacataaatagaagataaagtgtggttgtgaaatgaatttaccaaaatatccttaatacatggggtgtacagtgaaatgtatga 21293750  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    |||||||||||| |||||||||    
T  21293751 ataaagggtgtttatgtaacat 21293772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 8159628 - 8159694
Alignment:
Q  1 taacattttcaaagtgaacacgggccactatagacataatgaagtttgtatgttataatttatttaa 67  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  8159628 taacattttcaaagtgaacacaggccactatagacataatgaagtttgtatgttataatttatttaa 8159694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 225 - 319
Target Start/End: Complemental strand, 27441641 - 27441547
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||||| ||||||||||||||| |||||||||||||| ||||||||||| |||| ||| |||||||||| |||||||||||||||||||||    
T  27441641 aagagaaagtatggttgtgagatgaatttaccaaaatatccttaatacataggatgtacaatagggtgtatgattaaagggtgttcatgtaacat 27441547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 8156601 - 8156662
Alignment:
Q  5 attttcaaagtgaacacgggccactatagacataatgaagtttgtatgttataatttatttaa 67  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  8156601 atttccaaagtgaacacgggccactatagacataatgaag-ttgtatgttataatctatttaa 8156662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 225 - 319
Target Start/End: Original strand, 31109223 - 31109317
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||| |||||| || || |||| ||| ||||||||||||| | ||| |||||||||||||| ||||||| |||||||||||||||||||||    
T  31109223 aagagaaaatgtggtcgtaagttgaatttatcaaaatatccctagtgcatggggtgtataatgggatgtatgattaaagggtgttcatgtaacat 31109317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 225 - 319
Target Start/End: Complemental strand, 33242502 - 33242408
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||||| || |||||||||||| |||||||||| ||| |||||||| ||||||| |||  ||||||||| |||| ||||||||||||||||    
T  33242502 aagagaaagtatgtttgtgagatgaatttaccaaaatgtccttaatacatggggtgtacaataaggtgtatgattaaatggtgttcatgtaacat 33242408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 225 - 319
Target Start/End: Complemental strand, 33254012 - 33253918
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||||||||| || |||||||||||| ||||||| || |||||||| ||| ||||||| ||| |||||| ||| |||| ||||||||||||||||    
T  33254012 aagataaagtatgattgtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaacat 33253918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 64 - 103
Target Start/End: Original strand, 22043519 - 22043558
Alignment:
Q  64 ttaagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    ||||||||||||||||||||||| | ||||||||||||||    
T  22043519 ttaagggttaatagtgtttttcacccctgtaatatatgtc 22043558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 103
Target Start/End: Complemental strand, 2255663 - 2255613
Alignment:
Q  53 ttataatttatttaagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||| ||||||| ||||||||||||||||||||  | ||||||||||||||    
T  2255663 ttattatttattcaagggttaatagtgtttttcgcccctgtaatatatgtc 2255613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 13788038 - 13788076
Alignment:
Q  65 taagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||||| | ||||||||||||||    
T  13788038 taagggttaatagtgtttttcacccctgtaatatatgtc 13788076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 13796657 - 13796695
Alignment:
Q  65 taagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||||| | ||||||||||||||    
T  13796657 taagggttaatagtgtttttcacccctgtaatatatgtc 13796695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 6176690 - 6176727
Alignment:
Q  66 aagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  6176690 aagggttaatagtgtttttcacccctgtaatatatgtc 6176727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 6176987 - 6176942
Alignment:
Q  58 atttatttaagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    ||||| |||| |||||||||||||||||| | ||||||||||||||    
T  6176987 atttaattaaaggttaatagtgtttttcacccctgtaatatatgtc 6176942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 9887939 - 9887902
Alignment:
Q  66 aagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  9887939 aagggttaatagtgtttttcacctctgtaatatatgtc 9887902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 99
Target Start/End: Original strand, 10129840 - 10129873
Alignment:
Q  66 aagggttaatagtgtttttcaacgctgtaatata 99  Q
    ||||||||||||||||||||||| ||||||||||    
T  10129840 aagggttaatagtgtttttcaaccctgtaatata 10129873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 15502815 - 15502778
Alignment:
Q  66 aagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  15502815 aagggttaatagtgtttttcacccctgtaatatatgtc 15502778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 19591587 - 19591550
Alignment:
Q  66 aagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  19591587 aagggttaatagtgtttttcacccctgtaatatatgtc 19591550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Original strand, 26241270 - 26241307
Alignment:
Q  62 atttaagggttaatagtgtttttcaacgctgtaatata 99  Q
    ||||||||||||||||||||||||| | ||||||||||    
T  26241270 atttaagggttaatagtgtttttcacccctgtaatata 26241307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 28039181 - 28039144
Alignment:
Q  66 aagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  28039181 aagggttaatagtgtttttcacccctgtaatatatgtc 28039144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 2965567 - 2965607
Alignment:
Q  63 tttaagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||| ||||||| | ||||||||||||||    
T  2965567 tttaagggttaatagtctttttcacccctgtaatatatgtc 2965607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 2965858 - 2965822
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||| | ||||||||||||||    
T  2965858 agggttaatagtgtttttcacccctgtaatatatgtc 2965822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 4407863 - 4407903
Alignment:
Q  63 tttaagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||| ||||||||||||||||||| | ||||||||||||||    
T  4407863 tttatgggttaatagtgtttttcacccctgtaatatatgtc 4407903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 14597379 - 14597343
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||| | ||||||||||||||    
T  14597379 agggttaatagtgtttttcacccctgtaatatatgtc 14597343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 103
Target Start/End: Original strand, 25948621 - 25948665
Alignment:
Q  59 tttatttaagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    ||||||| |||||||||||||||||||| |  |||||||||||||    
T  25948621 tttattttagggttaatagtgtttttcacccttgtaatatatgtc 25948665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 27660373 - 27660409
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||| | ||||||||||||||    
T  27660373 agggttaatagtgtttttcacccctgtaatatatgtc 27660409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 110; Significance: 2e-55; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 36150256 - 36150135
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  36150256 gtggcaacctggactccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctgatacatagggtgtataatggggtgtatga 36150157  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||||| ||||||||||||    
T  36150156 ataaagggtattcatgtaacat 36150135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 197 - 319
Target Start/End: Original strand, 54246121 - 54246243
Alignment:
Q  197 tgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatg 296  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| |    
T  54246121 tgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttacaaaaatatctctaatacatagggtgtacaatggggtgtagg 54246220  T
Q  297 aataaagggtgttcatgtaacat 319  Q
    |||||||||||||||||||||||    
T  54246221 aataaagggtgttcatgtaacat 54246243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 54237222 - 54237101
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||    
T  54237222 gtggcaatctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtagga 54237123  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||||||||||||||||||    
T  54237122 ataaagggtgttcatgtaacat 54237101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 197 - 319
Target Start/End: Complemental strand, 27748690 - 27748568
Alignment:
Q  197 tgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatg 296  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  27748690 tgtggcaacctggaccccacacaaatagaagataaagtattgttgtgagatgaacttaccaaaatatccctaatacataaggtgtataatgaggtgtatg 27748591  T
Q  297 aataaagggtgttcatgtaacat 319  Q
    |||||| ||||||||||||||||    
T  27748590 aataaaaggtgttcatgtaacat 27748568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 24688376 - 24688497
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||  |    
T  24688376 gtggcaacctggaccccacataaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggagtgtagaa 24688475  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||||||||||||||||||    
T  24688476 ataaagggtgttcatgtaacat 24688497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 25413807 - 25413686
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||| ||    
T  25413807 gtggtaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttacaaaaatatccctaatacataaggtgtacaatggggtgtagga 25413708  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||||||||||||||||||    
T  25413707 ataaagggtgttcatgtaacat 25413686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 40480875 - 40480754
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||  |||||    
T  40480875 gtggcaacctggaccctacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacataggatgtacaatggggcatatga 40480776  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||||||||||||||||||    
T  40480775 ataaagggtgttcatgtaacat 40480754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 40808991 - 40808870
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||    
T  40808991 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatggggtgtagga 40808892  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||| |||||| |||||||||    
T  40808891 ataaatggtgttgatgtaacat 40808870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 42394393 - 42394514
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||| ||    
T  42394393 gtggcaatctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtagga 42394492  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||||||||||||||||||    
T  42394493 ataaagggtgttcatgtaacat 42394514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 53581832 - 53581953
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||| ||||||||    
T  53581832 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttatcaaaatatccctaatacataggatgtacaatggagtgtatga 53581931  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    |||||| |||||||||||||||    
T  53581932 ataaagagtgttcatgtaacat 53581953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 46941179 - 46941058
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| | |||| ||    
T  46941179 gtggcaacttggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtagga 46941080  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||||||||||||||||||    
T  46941079 ataaagggtgttcatgtaacat 46941058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 197 - 319
Target Start/End: Original strand, 45126901 - 45127023
Alignment:
Q  197 tgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatg 296  Q
    ||||| || |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||    
T  45126901 tgtggtaatctggaccccacataaatagaaaataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatg 45127000  T
Q  297 aataaagggtgttcatgtaacat 319  Q
    ||||||||||||| |||||||||    
T  45127001 aataaagggtgtttatgtaacat 45127023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 42100814 - 42100693
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    ||||||||||| || ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||| ||    
T  42100814 gtggcaacctgaactccacacaaataaaagataaaatgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtagga 42100715  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||||||||||||||||||    
T  42100714 ataaagggtgttcatgtaacat 42100693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 197 - 319
Target Start/End: Original strand, 47190999 - 47191120
Alignment:
Q  197 tgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatg 296  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||| |||| |||||| |    
T  47190999 tgtggtaacttggaccccacacaaatagaagataaagtgtggttgtgagatgaacttatcaaaatatctctaatacat-gggtgtacaatgaggtgtagg 47191097  T
Q  297 aataaagggtgttcatgtaacat 319  Q
    |||||||||||||||||||||||    
T  47191098 aataaagggtgttcatgtaacat 47191120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 197 - 309
Target Start/End: Complemental strand, 51249435 - 51249323
Alignment:
Q  197 tgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatg 296  Q
    |||||||| ||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||| |||  ||||||||||||| ||  ||    
T  51249435 tgtggcaatctggatcccacacaaatagaagagaaagtgtggttgtgagatgaatttaccaaaatatccttaatgcatgaggtgtataatgggttgggtg 51249336  T
Q  297 aataaagggtgtt 309  Q
    |||||||||||||    
T  51249335 aataaagggtgtt 51249323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 201 - 282
Target Start/End: Complemental strand, 52629951 - 52629870
Alignment:
Q  201 gcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgta 282  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  52629951 gcaacctggaccctacataaatagaagataaagtgtggttgtgagatgaacttacaaaaatatccttaatacatagggtgta 52629870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 53273658 - 53273779
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||| |||||||| |||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| |||| ||| || ||    
T  53273658 gtggtaacctggatcccacataaataaaagataaagtatggttgtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtatagga 53273757  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||| | ||||||| ||||||    
T  53273758 ataaatgatgttcatataacat 53273779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 225 - 319
Target Start/End: Original strand, 4190266 - 4190360
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||||| ||||||||||||||| ||||||||||||| |||||||||| |||||| ||| |||||||||| |||||||||||||||||||||    
T  4190266 aagagaaagtatggttgtgagatgaatttaccaaaatatctctaatacataaggtgtacaatagggtgtatgattaaagggtgttcatgtaacat 4190360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 225 - 319
Target Start/End: Complemental strand, 9434223 - 9434129
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||||| ||||||||||||||| |||||||||| |||||||| ||| ||||||| ||| | |||||||| |||||||||||||||||||||    
T  9434223 aagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagagtgtatgattaaagggtgttcatgtaacat 9434129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 222 - 319
Target Start/End: Original strand, 29558232 - 29558329
Alignment:
Q  222 tagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    ||||| ||||| |||| |||||||||||| ||||||| |||| ||||||| |||||||||| |||| | |||||||||||||||||||||| ||||||    
T  29558232 tagaaaataaaatgtgattgtgagatgaatttaccaatatattcctaatatatagggtgtacaatgagatgtatgaataaagggtgttcatataacat 29558329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 225 - 319
Target Start/End: Original strand, 10457893 - 10457987
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||||| |||||||||||| || |||||||||||||| |||| ||| ||||||| ||| |||||||||| |||| ||||||||||||||||    
T  10457893 aagagaaagtatggttgtgagataaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaaaggtgttcatgtaacat 10457987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 312
Target Start/End: Original strand, 11064707 - 11064810
Alignment:
Q  209 gaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgt 308  Q
    ||||||||||||||||||||  ||||||| || ||||||||| | | ||||||||| ||||  ||||||||||| |||| |||||||||||||| | |||    
T  11064707 gaccccacacaaatagaagagtaagtgtgattatgagatgaattaatcaaaatatctctaaagcatagggtgtacaatgaggtgtatgaataaatgatgt 11064806  T
Q  309 tcat 312  Q
    ||||    
T  11064807 tcat 11064810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 1078344 - 1078232
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    ||||||||||| || ||||||||||||||||||        ||||||||||||| ||| ||||||||| ||||||||  |||||| |||| |||| | ||    
T  1078344 gtggcaacctgaactccacacaaatagaagata--------ttgtgagatgaacctacaaaaatatcc-taatacattaggtgtacaatgaggtgcagga 1078254  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||||||||||||||||||    
T  1078253 ataaagggtgttcatgtaacat 1078232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 236 - 319
Target Start/End: Complemental strand, 25996356 - 25996273
Alignment:
Q  236 tggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    ||||||||||||||| |||||||||| ||| ||||| || ||||||| |||  | ||||||| |||||||||||||||||||||    
T  25996356 tggttgtgagatgaatttaccaaaatgtccttaatatatggggtgtacaataagatgtatgattaaagggtgttcatgtaacat 25996273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 316
Target Start/End: Complemental strand, 51757692 - 51757601
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaa 316  Q
    |||| ||||| ||||||||||||||| |||| ||||| ||| |||| |||  |||||| ||| |||||||||| ||||||||||| ||||||    
T  51757692 aagagaaagtatggttgtgagatgaaattactaaaatgtccataatgcatgaggtgtacaatagggtgtatgattaaagggtgtttatgtaa 51757601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 225 - 319
Target Start/End: Complemental strand, 34791928 - 34791834
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||||| ||||||||||||||| |||  ||||| |||||||| |||  ||| || |||  ||||||||| |||||||||||||||||||||    
T  34791928 aagagaaagtatggttgtgagatgaaattattaaaatgtccctaatgcatgaggtttacaatatggtgtatgattaaagggtgttcatgtaacat 34791834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 225 - 319
Target Start/End: Original strand, 52627978 - 52628072
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||||| || |||||||||||| |||||||||||| | |||| |||  |||||| ||| || ||||||| ||||||||||||| |||||||    
T  52627978 aagagaaagtatgattgtgagatgaatttaccaaaatatacttaatgcatgaggtgtacaataggatgtatgattaaagggtgttcacgtaacat 52628072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 281
Target Start/End: Complemental strand, 19148873 - 19148822
Alignment:
Q  230 aaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgt 281  Q
    |||||||| ||||||||| || |||| ||||| |||||||||||||||||||    
T  19148873 aaagtgtgattgtgagataaatttactaaaatgtccctaatacatagggtgt 19148822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 62 - 101
Target Start/End: Complemental strand, 52866251 - 52866212
Alignment:
Q  62 atttaagggttaatagtgtttttcaacgctgtaatatatg 101  Q
    ||||||||||||||||||||||||| | ||||||||||||    
T  52866251 atttaagggttaatagtgtttttcacccctgtaatatatg 52866212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 103
Target Start/End: Complemental strand, 24234295 - 24234257
Alignment:
Q  65 taagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||||| | ||||||||||||||    
T  24234295 taagggttaatagtgtttttcacctctgtaatatatgtc 24234257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 3526826 - 3526789
Alignment:
Q  66 aagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  3526826 aagggttaatagtgtttttcacccctgtaatatatgtc 3526789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 7014727 - 7014764
Alignment:
Q  66 aagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  7014727 aagggttaatagtgtttttcacccctgtaatatatgtc 7014764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 9268860 - 9268823
Alignment:
Q  66 aagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  9268860 aagggttaatagtgtttttcacccctgtaatatatgtc 9268823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 25484114 - 25484151
Alignment:
Q  66 aagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  25484114 aagggttaatagtgtttttcacccctgtaatatatgtc 25484151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 33312622 - 33312585
Alignment:
Q  66 aagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  33312622 aagggttaatagtgtttttcacccctgtaatatatgtc 33312585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 40004162 - 40004125
Alignment:
Q  66 aagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  40004162 aagggttaatagtgtttttcacccctgtaatatatgtc 40004125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 5047453 - 5047417
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||| | ||||||||||||||    
T  5047453 agggttaatagtgtttttcacccctgtaatatatgtc 5047417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 6019684 - 6019648
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||| | ||||||||||||||    
T  6019684 agggttaatagtgtttttcacccctgtaatatatgtc 6019648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 102
Target Start/End: Complemental strand, 8128173 - 8128137
Alignment:
Q  66 aagggttaatagtgtttttcaacgctgtaatatatgt 102  Q
    ||||||||||||||||||||| | |||||||||||||    
T  8128173 aagggttaatagtgtttttcacccctgtaatatatgt 8128137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 9268572 - 9268608
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||| | ||||||||||||||    
T  9268572 agggttaatagtgtttttcacccctgtaatatatgtc 9268608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 25484411 - 25484367
Alignment:
Q  59 tttatttaagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||| | ||||||||||||||||||| | ||||||||||||||    
T  25484411 tttattcatgggttaatagtgtttttcatccctgtaatatatgtc 25484367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 102
Target Start/End: Complemental strand, 40717646 - 40717610
Alignment:
Q  66 aagggttaatagtgtttttcaacgctgtaatatatgt 102  Q
    ||||||||||||||||||||| | |||||||||||||    
T  40717646 aagggttaatagtgtttttcacccctgtaatatatgt 40717610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 53035905 - 53035869
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||| | ||||||||||||||    
T  53035905 agggttaatagtgtttttcacctctgtaatatatgtc 53035869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 54014556 - 54014592
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||| | ||||||||||||||    
T  54014556 agggttaatagtgtttttcacccctgtaatatatgtc 54014592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 106; Significance: 5e-53; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 11582892 - 11582771
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||    
T  11582892 gtggcaatctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtagga 11582793  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||||||||||||||||||    
T  11582792 ataaagggtgttcatgtaacat 11582771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 36743457 - 36743578
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||    
T  36743457 gtggcaatctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtagga 36743556  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||||||||||||||||||    
T  36743557 ataaagggtgttcatgtaacat 36743578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 30660716 - 30660837
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||  |    
T  30660716 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtaagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtagaa 30660815  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||||||||||||||||||    
T  30660816 ataaagggtgttcatgtaacat 30660837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 42197409 - 42197530
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||| ||    
T  42197409 gtggcaatctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagtgtgtgcaatggggtgtagga 42197508  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||| ||||||||||||||||    
T  42197509 ataaatggtgttcatgtaacat 42197530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 29705488 - 29705367
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||  |    
T  29705488 gtggcaacttggaccccgcacaaatagaagataaagtgtggttgtgagatgaacttatcaaaatatccctaatacatggggtgtacaatggggtgtagaa 29705389  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||||||||||||||||||    
T  29705388 ataaagggtgttcatgtaacat 29705367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 45397442 - 45397321
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    ||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||    
T  45397442 gtggcaatctggagcccacacaaatagaagataaattgtggttgtgagatgaacttacaaaaatatccctaatacatagggtgtagaatggggtgtagga 45397343  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    |||||||||||||| |||||||    
T  45397342 ataaagggtgttcacgtaacat 45397321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 197 - 319
Target Start/End: Original strand, 29800923 - 29801045
Alignment:
Q  197 tgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatg 296  Q
    |||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||    
T  29800923 tgtggcaatcttgaccccacataaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatg 29801022  T
Q  297 aataaagggtgttcatgtaacat 319  Q
    |||||| |||||| |||||||||    
T  29801023 aataaatggtgtttatgtaacat 29801045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 26125760 - 26125640
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    ||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||    
T  26125760 gtggcaatctggaccc-acataaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtatga 26125662  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    |||||||||||| |||||||||    
T  26125661 ataaagggtgtttatgtaacat 26125640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 201 - 316
Target Start/End: Complemental strand, 31384787 - 31384672
Alignment:
Q  201 gcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaata 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||| |  |||| |||||    
T  31384787 gcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatattcctaatacatggggtgtacaatagaatgtaagaata 31384688  T
Q  301 aagggtgttcatgtaa 316  Q
    ||||||||||||||||    
T  31384687 aagggtgttcatgtaa 31384672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 198 - 316
Target Start/End: Original strand, 2165937 - 2166055
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||| || ||||||||||| ||    
T  2165937 gtggcaacctgaaccccacacaaatagaagataaagtgtggttatgagatgaacttaccaaaatatctctaatacatggggtatacaatggggtgtagga 2166036  T
Q  298 ataaagggtgttcatgtaa 316  Q
    ||||| |||||||||||||    
T  2166037 ataaatggtgttcatgtaa 2166055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 197 - 319
Target Start/End: Complemental strand, 42295321 - 42295200
Alignment:
Q  197 tgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatg 296  Q
    ||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||| |||||| |    
T  42295321 tgtggcaacttggaccc-acataaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggagtgtacaatgaggtgtagg 42295223  T
Q  297 aataaagggtgttcatgtaacat 319  Q
    |||||||||||||||||||||||    
T  42295222 aataaagggtgttcatgtaacat 42295200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 30912536 - 30912657
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||   ||||| ||||||||||| ||    
T  30912536 gtggcaacctagaccccacacaaatagaagataaggtgcggttgtgagatgaacttaccaaaatacccctaatacatgaagtgtacaatggggtgtagga 30912635  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||||||||||||||||||    
T  30912636 ataaagggtgttcatgtaacat 30912657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 2547122 - 2547001
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||| ||||| |||||  |    
T  2547122 gtggcaacttggatcccacacaaatagaagataaagtgtggttgtgagatgaacttactaaaatatccctaatacatgaggtgtacaatggagtgtagaa 2547023  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    |||||| |||||||||||||||    
T  2547022 ataaagagtgttcatgtaacat 2547001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 5755029 - 5754908
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||| |||||| |||| ||    
T  5755029 gtggcaacttggatcccacataaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatatatgggatgtacaatgggatgtagga 5754930  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||| ||||||||||||||||    
T  5754929 ataaaaggtgttcatgtaacat 5754908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 20148886 - 20148765
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    ||||||| ||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||  |||||| |||||| |||||||    
T  20148886 gtggcaatctggatcccacataaatagatgataaagtgtggttgtgagatgaacttaccaaaatatccctaatatatgaggtgtacaatgggatgtatga 20148787  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    |||||||||||| |||||||||    
T  20148786 ataaagggtgtttatgtaacat 20148765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 198 - 316
Target Start/End: Complemental strand, 1375668 - 1375550
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    ||||||| ||| || |||||||||||||||||||||||| |||||||||| || |||||||||||||||||||| || ||||||| ||| ||||||||||    
T  1375668 gtggcaatctgaactccacacaaatagaagataaagtgtagttgtgagataaatttaccaaaatatccctaatatatggggtgtacaattgggtgtatga 1375569  T
Q  298 ataaagggtgttcatgtaa 316  Q
    ||||| |||||||||||||    
T  1375568 ataaaaggtgttcatgtaa 1375550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 198 - 282
Target Start/End: Complemental strand, 9241678 - 9241594
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgta 282  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  9241678 gtggcaacctggaccccacataaatagaagataaagtgtggttgtgagatgaacttacaaaaatatccctaatatatagggtgta 9241594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 228 - 319
Target Start/End: Complemental strand, 42699353 - 42699262
Alignment:
Q  228 ataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||| |||||| ||||||||||| ||||||||||||||||||||||||    
T  42699353 ataaagtgtggttgtgagatgaacttacaaaaatatccataatacataaggtgtacaatggggtgtaggaataaagggtgttcatgtaacat 42699262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 198 - 308
Target Start/End: Complemental strand, 3743897 - 3743787
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    ||||||| ||| |||| ||| |||||||||||||||||||||||||||||||||||| |||||||| | ||||| || ||||||||||||||  | ||||    
T  3743897 gtggcaatctgaaccctacataaatagaagataaagtgtggttgtgagatgaacttatcaaaatatacttaatatatggggtgtataatgggagggatga 3743798  T
Q  298 ataaagggtgt 308  Q
    |||||||||||    
T  3743797 ataaagggtgt 3743787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 197 - 315
Target Start/End: Original strand, 40528607 - 40528726
Alignment:
Q  197 tgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatg 296  Q
    |||| |||| || ||||||||||||||||||| |||||||||||||||||| || ||| |||||| ||||||||| || ||||||| |||||||| | ||    
T  40528607 tgtgacaacttgaaccccacacaaatagaagagaaagtgtggttgtgagataaatttatcaaaatgtccctaatatatggggtgtacaatggggtttgtg 40528706  T
Q  297 aat-aaagggtgttcatgta 315  Q
    ||| ||||||||||||||||    
T  40528707 aataaaagggtgttcatgta 40528726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 225 - 319
Target Start/End: Complemental strand, 35181615 - 35181521
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||||| ||||||||||||||| |||||||||| |||||||| ||| ||||||| ||| |||||||||| |||||||||||||||||||||    
T  35181615 aagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacat 35181521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 225 - 319
Target Start/End: Complemental strand, 34304887 - 34304793
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||||| ||||||||||||||| |||||||||| |||||||| ||| ||||||| ||| |||||||||| |||||| ||||||||||||||    
T  34304887 aagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaaggatgttcatgtaacat 34304793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 225 - 319
Target Start/End: Original strand, 18066719 - 18066813
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||||| ||||||||||||||| |||| |||||||||||||||||| || |||| ||| |  ||||||| |||||||||||||||||||||    
T  18066719 aagagaaagtatggttgtgagatgaaattactaaaatatccctaatacatgggatgtacaatagaatgtatgattaaagggtgttcatgtaacat 18066813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 225 - 319
Target Start/End: Original strand, 33629994 - 33630088
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||||| | ||||||||||||| |||| ||||| |||||||| ||||||||||| |||| ||||||||| |||||||||||| ||||||||    
T  33629994 aagagaaagtatagttgtgagatgaaattactaaaatgtccctaatgcatagggtgtacaatgaggtgtatgattaaagggtgttcgtgtaacat 33630088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 231 - 319
Target Start/End: Original strand, 16603633 - 16603721
Alignment:
Q  231 aagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||||||||||||||| |||||||||| ||  |||| ||| |||||||||||  ||||||||| |||||||||| ||||||||||    
T  16603633 aagtatggttgtgagatgaatttaccaaaatgtctttaatgcatggggtgtataataaggtgtatgattaaagggtgtgcatgtaacat 16603721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 319
Target Start/End: Original strand, 16358839 - 16358929
Alignment:
Q  230 aaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttc-atgtaacat 319  Q
    ||||| ||||||||||||||| ||| |||||||| | |||| ||| || |||| ||| |||||||||| |||||||| ||| |||||||||    
T  16358839 aaagtatggttgtgagatgaatttatcaaaatattcttaatgcatgggatgtacaatagggtgtatgattaaagggtcttcaatgtaacat 16358929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 36574690 - 36574653
Alignment:
Q  66 aagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  36574690 aagggttaatagtgtttttcaaccctgtaatatatgtc 36574653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 28004635 - 28004675
Alignment:
Q  63 tttaagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||||||| | ||||||||||||||    
T  28004635 tttaagggttaatagtgtttttcacccctgtaatatatgtc 28004675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 28061937 - 28061977
Alignment:
Q  63 tttaagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||||||| | ||||||||||||||    
T  28061937 tttaagggttaatagtgtttttcacccctgtaatatatgtc 28061977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 64 - 103
Target Start/End: Original strand, 17159107 - 17159146
Alignment:
Q  64 ttaagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    ||||||||||||||||||||||| | ||||||||||||||    
T  17159107 ttaagggttaatagtgtttttcacccctgtaatatatgtc 17159146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 280 - 319
Target Start/End: Original strand, 19386626 - 19386665
Alignment:
Q  280 gtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    ||||||| |||||||||| |||||||||||||||||||||    
T  19386626 gtataatagggtgtatgattaaagggtgttcatgtaacat 19386665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 10678153 - 10678211
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtat 283  Q
    |||| ||||| ||||||||||||||| |||||||||| ||| ||||| || ||||||||    
T  10678153 aagagaaagtatggttgtgagatgaatttaccaaaatgtccttaatatatggggtgtat 10678211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 18609268 - 18609305
Alignment:
Q  66 aagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  18609268 aagggttaatagtgtttttcatccctgtaatatatgtc 18609305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 21127320 - 21127357
Alignment:
Q  66 aagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  21127320 aagggttaatagtgtttttcacctctgtaatatatgtc 21127357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Original strand, 28889021 - 28889058
Alignment:
Q  62 atttaagggttaatagtgtttttcaacgctgtaatata 99  Q
    ||||||||||||||||||||||||| | ||||||||||    
T  28889021 atttaagggttaatagtgtttttcacccctgtaatata 28889058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 275
Target Start/End: Original strand, 32328815 - 32328868
Alignment:
Q  222 tagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacata 275  Q
    ||||||| ||||| | |||||||||| ||||||||||||||| |||||| ||||    
T  32328815 tagaagagaaagtatagttgtgagataaacttaccaaaatattcctaatgcata 32328868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 116616 - 116652
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||| | ||||||||||||||    
T  116616 agggttaatagtgtttttcacccctgtaatatatgtc 116652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 10761214 - 10761178
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||| | ||||||||||||||    
T  10761214 agggttaatagtgtttttcacccctgtaatatatgtc 10761178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 17749860 - 17749896
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||| | ||||||||||||||    
T  17749860 agggttaatagtgtttttcatccctgtaatatatgtc 17749896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 99
Target Start/End: Complemental strand, 34821700 - 34821664
Alignment:
Q  63 tttaagggttaatagtgtttttcaacgctgtaatata 99  Q
    |||||||||||||||||||||||| | ||||||||||    
T  34821700 tttaagggttaatagtgtttttcacccctgtaatata 34821664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 106; Significance: 5e-53; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 24000986 - 24001107
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||    
T  24000986 gtggcaatctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtagga 24001085  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||||||||||||||||||    
T  24001086 ataaagggtgttcatgtaacat 24001107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 42538405 - 42538526
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||    
T  42538405 gtggcaatctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtagga 42538504  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||||||||||||||||||    
T  42538505 ataaagggtgttcatgtaacat 42538526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 197 - 319
Target Start/End: Original strand, 5810897 - 5811019
Alignment:
Q  197 tgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatg 296  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||| |    
T  5810897 tgtggcaacttggaccccacacaaatagaagataaagtgtggttgtgagatgaacttatcaaaatatccctaatatatagggtgtacaatggggtgtagg 5810996  T
Q  297 aataaagggtgttcatgtaacat 319  Q
    ||||||||||| |||||||||||    
T  5810997 aataaagggtggtcatgtaacat 5811019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 41861802 - 41861679
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccc--taatacatagggtgtataatggggtgtat 295  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |  |||||||||||||||||||| ||||||||    
T  41861802 gtggcaacctggaccccatacaaatagaagataaagtgtggttgtgagataaacttaccaaaatatctctataatacatagggtgtataattgggtgtat 41861703  T
Q  296 gaataaagggtgttcatgtaacat 319  Q
    ||||||||||||||||||||||||    
T  41861702 gaataaagggtgttcatgtaacat 41861679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 5015521 - 5015400
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||| |||||  |    
T  5015521 gtggcaacttggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagaa 5015422  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    |||||| |||||||||||||||    
T  5015421 ataaagagtgttcatgtaacat 5015400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 26898376 - 26898497
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |  |||| ||| ||||||||||    
T  26898376 gtggtaacctggaccccacacaaatagaatataaagtgtggttgtaagatgaacttaccaaaatatccctaatacatggaatgtacaattgggtgtatga 26898475  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||| ||||||||||||||||    
T  26898476 ataaaaggtgttcatgtaacat 26898497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 35069847 - 35069726
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||| |||||| ||    
T  35069847 gtggcaacttggacctcacataaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtagga 35069748  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    |||||| |||||||||||||||    
T  35069747 ataaagagtgttcatgtaacat 35069726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 42972978 - 42972857
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||| ||||| ||||| ||    
T  42972978 gtggcaacttggaccccacacaaatagaagataaaatgtggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagga 42972879  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||| |||||| |||||||    
T  42972878 ataaaggatgttcaggtaacat 42972857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 43343598 - 43343719
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||| |||||||  |    
T  43343598 gtggcaacttggaccccacacaaatagaagataaagtgtggttgtgagatgaacttatcaaaatatccctaatacatggggtgtacaatagggtgtagaa 43343697  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||| | ||||||||||||||    
T  43343698 ataaatgatgttcatgtaacat 43343719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 44416908 - 44417029
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||| |||||||  |    
T  44416908 gtggcaacttggaccccacacaaatagaagataaagtgtggttgtgagatgaacttatcaaaatatccctaatacatggggtgtacaatagggtgtagaa 44417007  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||| | ||||||||||||||    
T  44417008 ataaatgatgttcatgtaacat 44417029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 197 - 319
Target Start/End: Complemental strand, 10573876 - 10573754
Alignment:
Q  197 tgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatg 296  Q
    |||||||| || ||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||| ||| || ||||||    
T  10573876 tgtggcaatcttgaccccacataaatagaagataaagtgtggttgtgagatgaatttaccaaaatattcctaatacatggggtgtacaataggatgtatg 10573777  T
Q  297 aataaagggtgttcatgtaacat 319  Q
    ||||||||||||| |||||||||    
T  10573776 aataaagggtgtttatgtaacat 10573754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 4638173 - 4638294
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| || ||||||| ||| | ||||||||    
T  4638173 gtggtaacctagaccccacacaaatagaagataaagtatggttgtgagatgaacttaccaaaatatccataatatatggggtgtacaattgagtgtatga 4638272  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||| ||||||||||||||||    
T  4638273 ataaaaggtgttcatgtaacat 4638294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 44326304 - 44326183
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    ||||||| ||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||  |||||| |||||| |||||||    
T  44326304 gtggcaatctggatcccacataaatagatgataaagtgtggttgtgagatgaacttaccaaaatatccctaatatatgaggtgtacaatgggatgtatga 44326205  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    |||||||||||| |||||||||    
T  44326204 ataaagggtgtttatgtaacat 44326183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 200 - 308
Target Start/End: Original strand, 27393236 - 27393344
Alignment:
Q  200 ggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaat 299  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||| || |||| ||||    
T  27393236 ggcaacctggaccccacataaatagaagataaagtgtggttgtgagatgaacttacaaaaatatccctaatacatagagtgtacaataggatgtaggaat 27393335  T
Q  300 aaagggtgt 308  Q
    |||||||||    
T  27393336 aaagggtgt 27393344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 198 - 315
Target Start/End: Original strand, 32029791 - 32029908
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||||||| ||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||| ||||||||||| ||    
T  32029791 gtggcaacttggaccccacataaatagaagataaagtgtggttgttagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtagga 32029890  T
Q  298 ataaagggtgttcatgta 315  Q
    |||||  ||||| |||||    
T  32029891 ataaaaagtgtttatgta 32029908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 206 - 318
Target Start/End: Complemental strand, 45326138 - 45326026
Alignment:
Q  206 ctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaaggg 305  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||| |||| | |||||||||||| ||    
T  45326138 ctggaccccacataaatagaagataaagtgtgattgtgagatgaacttaccaaaatatccctaatatatggggtgtacaatgtgatgtatgaataaaagg 45326039  T
Q  306 tgttcatgtaaca 318  Q
    |||| ||||||||    
T  45326038 tgtttatgtaaca 45326026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 197 - 319
Target Start/End: Original strand, 5194204 - 5194326
Alignment:
Q  197 tgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatg 296  Q
    |||||||| || ||||||||||||||||||||  ||||||| |||||||||||| ||| |||||||||| ||| |||||||||||| |||| ||||||||    
T  5194204 tgtggcaatctagaccccacacaaatagaagagtaagtgtgattgtgagatgaatttatcaaaatatccttaaaacatagggtgtacaatgaggtgtatg 5194303  T
Q  297 aataaagggtgttcatgtaacat 319  Q
    |||||| ||||||||||||||||    
T  5194304 aataaatggtgttcatgtaacat 5194326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 16180331 - 16180451
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||   |||||| | ||||||| ||| ||||||| ||    
T  16180331 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaatttaccaaaatatttataatacgtggggtgtacaat-gggtgtagga 16180429  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||| |||||| |||||||||    
T  16180430 ataaatggtgttgatgtaacat 16180451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 197 - 319
Target Start/End: Complemental strand, 43317570 - 43317448
Alignment:
Q  197 tgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatg 296  Q
    |||||||| || ||||||||||||||||||||  ||||||| |||||||||||| ||| ||||||||||||||  |||||| |||| |||| ||||||||    
T  43317570 tgtggcaatctagaccccacacaaatagaagagtaagtgtgattgtgagatgaatttatcaaaatatccctaaagcataggatgtacaatgaggtgtatg 43317471  T
Q  297 aataaagggtgttcatgtaacat 319  Q
    |||||| ||||||||||||||||    
T  43317470 aataaatggtgttcatgtaacat 43317448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 210 - 319
Target Start/End: Complemental strand, 9216415 - 9216307
Alignment:
Q  210 accccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgtt 309  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||| ||||||| ||| || | || ||||||||||||||    
T  9216415 accccacacaaatagaagataaaatgtggttgtgagatgaacttaccaaaatatctctaatgcat-gggtgtacaataggatataggaataaagggtgtt 9216317  T
Q  310 catgtaacat 319  Q
    ||||||||||    
T  9216316 catgtaacat 9216307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 199 - 319
Target Start/End: Original strand, 24280571 - 24280691
Alignment:
Q  199 tggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaa 298  Q
    ||||||| |||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||  ||| | ||| || |||| ||| |||||||||||    
T  24280571 tggcaacttggaccccacacaaatagaagagaaagtgtgattgtgagatgaatttaccaaaatatttctagtgcatgggatgtagaatagggtgtatgaa 24280670  T
Q  299 taaagggtgttcatgtaacat 319  Q
    ||||||||||||| |||||||    
T  24280671 taaagggtgttcacgtaacat 24280691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 198 - 301
Target Start/End: Original strand, 38160553 - 38160656
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||||||| ||||||||||| |||||||||||||||||| ||||||||||||| |||| |||||||||||||||||| ||||||| ||||| ||||| ||    
T  38160553 gtggcaacttggaccccacataaatagaagataaagtgtagttgtgagatgaagttactaaaatatccctaatacatggggtgtacaatggagtgtaaga 38160652  T
Q  298 ataa 301  Q
    ||||    
T  38160653 ataa 38160656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 236 - 319
Target Start/End: Complemental strand, 40237007 - 40236924
Alignment:
Q  236 tggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    ||||||||||||||| |||||||||| |||||||| ||| ||||||| ||| || ||||||| |||||||||||||||||||||    
T  40237007 tggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaataggatgtatgattaaagggtgttcatgtaacat 40236924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 225 - 319
Target Start/End: Complemental strand, 31513386 - 31513292
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||||| ||||||||||||||| |||||||||||||| |||| ||| |||| || ||| |||||||||| ||||| |||||||||||||||    
T  31513386 aagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgcatggggtatacaatagggtgtatgattaaagagtgttcatgtaacat 31513292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 225 - 319
Target Start/End: Original strand, 31408634 - 31408728
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||||| ||||||||| ||||| |||||||||||||| |||| ||| || |||| ||| | |||||||| |||||||||||||||||||||    
T  31408634 aagagaaagtatggttgtgaaatgaatttaccaaaatatccttaatgcatgggatgtacaatagagtgtatgattaaagggtgttcatgtaacat 31408728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 225 - 319
Target Start/End: Original strand, 27535232 - 27535326
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||||| | ||||||||||||| |||||||||| ||  ||| |||| | ||||| ||| | |||||||| |||||||||||||||||||||    
T  27535232 aagagaaagtatagttgtgagatgaaattaccaaaatgtctttaacacatggagtgtacaatagagtgtatgattaaagggtgttcatgtaacat 27535326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 102
Target Start/End: Complemental strand, 24438972 - 24438909
Alignment:
Q  39 atgaagtttgtatgttataatttatttaagggttaatagtgtttttcaacgctgtaatatatgt 102  Q
    ||||||||| |||| ||| |||| |||| ||||||||||||||||||| | |||||||||||||    
T  24438972 atgaagtttttatgctattatttttttatgggttaatagtgtttttcacccctgtaatatatgt 24438909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 319
Target Start/End: Complemental strand, 33384970 - 33384875
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataat-ggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||||| || |||||||||||| |||||||||| |||||||| ||| | || || ||| ||||||||||| |||| | ||||||||||||||    
T  33384970 aagagaaagtatgtttgtgagatgaatttaccaaaatgtccctaatgcatggagtatacaataggggtgtatgattaaatgatgttcatgtaacat 33384875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 319
Target Start/End: Complemental strand, 39998475 - 39998413
Alignment:
Q  257 aaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||||||||||||||||| ||||||| ||| || ||||||| ||||  |||||||||||||||    
T  39998475 aaaatatccctaatacatggggtgtacaataggatgtatgattaaaatgtgttcatgtaacat 39998413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 22947658 - 22947617
Alignment:
Q  62 atttaagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    ||||||||||||||||||||||||| | ||||||||||||||    
T  22947658 atttaagggttaatagtgtttttcacccctgtaatatatgtc 22947617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 103
Target Start/End: Original strand, 47668122 - 47668163
Alignment:
Q  62 atttaagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    ||||||||||||||||||||||||| | ||||||||||||||    
T  47668122 atttaagggttaatagtgtttttcacccctgtaatatatgtc 47668163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 103
Target Start/End: Complemental strand, 31644230 - 31644190
Alignment:
Q  63 tttaagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||||||| | ||||||||||||||    
T  31644230 tttaagggttaatagtgtttttcacctctgtaatatatgtc 31644190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 99
Target Start/End: Complemental strand, 42042971 - 42042923
Alignment:
Q  51 tgttataatttatttaagggttaatagtgtttttcaacgctgtaatata 99  Q
    ||||||| |||||| ||||||||||||||||||||| | ||||||||||    
T  42042971 tgttatattttattaaagggttaatagtgtttttcacccctgtaatata 42042923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 102
Target Start/End: Original strand, 43741973 - 43742013
Alignment:
Q  62 atttaagggttaatagtgtttttcaacgctgtaatatatgt 102  Q
    ||||||||||||||||||||||||| | |||||||||||||    
T  43741973 atttaagggttaatagtgtttttcacccctgtaatatatgt 43742013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 99
Target Start/End: Complemental strand, 3333086 - 3333044
Alignment:
Q  57 aatttatttaagggttaatagtgtttttcaacgctgtaatata 99  Q
    ||||| |||||||||||||||||||||||| | ||||||||||    
T  3333086 aatttctttaagggttaatagtgtttttcacccctgtaatata 3333044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 103
Target Start/End: Complemental strand, 9712694 - 9712644
Alignment:
Q  53 ttataatttatttaagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||| | | ||||||||||||||||||||| | ||||||||||||||    
T  9712694 ttataattaaataaagggttaatagtgtttttcacctctgtaatatatgtc 9712644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 103
Target Start/End: Complemental strand, 20033951 - 20033913
Alignment:
Q  65 taagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||||| | ||||||||||||||    
T  20033951 taagggttaatagtgtttttcacccctgtaatatatgtc 20033913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 23774948 - 23774986
Alignment:
Q  65 taagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||||| | ||||||||||||||    
T  23774948 taagggttaatagtgtttttcacccctgtaatatatgtc 23774986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 103
Target Start/End: Complemental strand, 28311397 - 28311355
Alignment:
Q  61 tatttaagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    ||||||||||||||||||| |||||| | ||||||||||||||    
T  28311397 tatttaagggttaatagtgcttttcacccctgtaatatatgtc 28311355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 38686825 - 38686779
Alignment:
Q  57 aatttatttaagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||||||||||| | | || |||||||||||    
T  38686825 aatttatttaagggttaatagtgttttttacccctttaatatatgtc 38686779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 24919956 - 24919919
Alignment:
Q  66 aagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  24919956 aagggttaatagtgtttttcacccctgtaatatatgtc 24919919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 31079397 - 31079360
Alignment:
Q  66 aagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  31079397 aagggttaatagtgtttttcacccctgtaatatatgtc 31079360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 100
Target Start/End: Complemental strand, 34116512 - 34116471
Alignment:
Q  59 tttatttaagggttaatagtgtttttcaacgctgtaatatat 100  Q
    |||||||||| ||||||||||||||||| | |||||||||||    
T  34116512 tttatttaagagttaatagtgtttttcatccctgtaatatat 34116471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 37101598 - 37101561
Alignment:
Q  66 aagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  37101598 aagggttaatagtgtttttcacccctgtaatatatgtc 37101561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 38651782 - 38651819
Alignment:
Q  66 aagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  38651782 aagggttaatagtgtttttcacccctgtaatatatgtc 38651819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 103
Target Start/End: Original strand, 41745083 - 41745124
Alignment:
Q  62 atttaagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||| |||||||||||||||||||| | ||||||||||||||    
T  41745083 attttagggttaatagtgtttttcacccctgtaatatatgtc 41745124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 46483909 - 46483872
Alignment:
Q  66 aagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  46483909 aagggttaatagtgtttttcacccctgtaatatatgtc 46483872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 99
Target Start/End: Complemental strand, 813708 - 813672
Alignment:
Q  63 tttaagggttaatagtgtttttcaacgctgtaatata 99  Q
    |||||||||||||||||||||||| | ||||||||||    
T  813708 tttaagggttaatagtgtttttcacccctgtaatata 813672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 102
Target Start/End: Original strand, 3216047 - 3216083
Alignment:
Q  66 aagggttaatagtgtttttcaacgctgtaatatatgt 102  Q
    ||||||||||||||||||||| | |||||||||||||    
T  3216047 aagggttaatagtgtttttcacccctgtaatatatgt 3216083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 7881411 - 7881451
Alignment:
Q  63 tttaagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||||||| |  |||||||||||||    
T  7881411 tttaagggttaatagtgtttttcacccttgtaatatatgtc 7881451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 11666755 - 11666791
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||| | ||||||||||||||    
T  11666755 agggttaatagtgtttttcacccctgtaatatatgtc 11666791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 15093743 - 15093707
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||| | ||||||||||||||    
T  15093743 agggttaatagtgtttttcacccctgtaatatatgtc 15093707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 16274468 - 16274504
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||| | ||||||||||||||    
T  16274468 agggttaatagtgtttttcacccctgtaatatatgtc 16274504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 17358290 - 17358254
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||| | ||||||||||||||    
T  17358290 agggttaatagtgtttttcacccctgtaatatatgtc 17358254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 30165473 - 30165509
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||| | ||||||||||||||    
T  30165473 agggttaatagtgtttttcacccctgtaatatatgtc 30165509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 31079109 - 31079145
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||| | ||||||||||||||    
T  31079109 agggttaatagtgtttttcacccctgtaatatatgtc 31079145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 38415894 - 38415930
Alignment:
Q  65 taagggttaatagtgtttttcaacgctgtaatatatg 101  Q
    |||||||||||||||||||||| | ||||||||||||    
T  38415894 taagggttaatagtgtttttcacccctgtaatatatg 38415930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 43989043 - 43989079
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||| | ||||||||||||||    
T  43989043 agggttaatagtgtttttcacccctgtaatatatgtc 43989079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 48741877 - 48741833
Alignment:
Q  59 tttatttaagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    ||||||| ||||||||||||| |||||| | ||||||||||||||    
T  48741877 tttattttagggttaatagtgcttttcacccctgtaatatatgtc 48741833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 5e-53; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 1750540 - 1750419
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||    
T  1750540 gtggcaatctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggggtgtagga 1750441  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||||||||||||||||||    
T  1750440 ataaagggtgttcatgtaacat 1750419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 19047283 - 19047162
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||| ||    
T  19047283 gtggcaatctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtagga 19047184  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||||||||||||||||||    
T  19047183 ataaagggtgttcatgtaacat 19047162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 203 - 319
Target Start/End: Original strand, 12302232 - 12302348
Alignment:
Q  203 aacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaa 302  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||  ||||||    
T  12302232 aacctggaccccacataaatagaagataaagtgtggttgtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggggtgtagaaataaa 12302331  T
Q  303 gggtgttcatgtaacat 319  Q
    |||||||||||||||||    
T  12302332 gggtgttcatgtaacat 12302348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 30838758 - 30838637
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||  | ||||  |    
T  30838758 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaataagatgtagaa 30838659  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||||||||||||||||||    
T  30838658 ataaagggtgttcatgtaacat 30838637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 43490375 - 43490496
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    ||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||| |||| ||    
T  43490375 gtggcaatctggaccccacataaatagaagataaagtgtggttatgagatgaacttaccaaaatatccctaatacatagagtgtacaatgggatgtagga 43490474  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||||||||||||||||||    
T  43490475 ataaagggtgttcatgtaacat 43490496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 211 - 319
Target Start/End: Complemental strand, 16096860 - 16096752
Alignment:
Q  211 ccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttc 310  Q
    ||||||| || |||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  16096860 ccccacataagtagaagataaagtgtggttgtgagattaactcaccaaaatatccctaatacatggggtgtataatggggtgtaggaataaagggtgttc 16096761  T
Q  311 atgtaacat 319  Q
    |||||||||    
T  16096760 atgtaacat 16096752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 4764700 - 4764821
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||   |||||||| ||||||| ||| ||||||| ||    
T  4764700 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaatttaccaaaatatttataatacatggggtgtacaatagggtgtagga 4764799  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||| |||||| |||||||||    
T  4764800 ataaatggtgttgatgtaacat 4764821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 43335737 - 43335858
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    ||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||| |||| |||||| ||    
T  43335737 gtggcaacctggatcccacataaatagaagataaagtgtagttgtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtgtagga 43335836  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||| | ||||||| ||||||    
T  43335837 ataaatgatgttcatataacat 43335858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 197 - 319
Target Start/End: Original strand, 13780708 - 13780830
Alignment:
Q  197 tgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatg 296  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||| |||||||||||||||  || ||||||| |||| ||||| ||    
T  13780708 tgtggcaacctggaccccacataaatagaagagaaagtgtggttgtgagatgaatttatcaaaatatccctaatgtatggggtgtacaatgaggtgtgtg 13780807  T
Q  297 aataaagggtgttcatgtaacat 319  Q
    ||||||  ||||| |||||||||    
T  13780808 aataaaatgtgttgatgtaacat 13780830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 197 - 319
Target Start/End: Original strand, 8896556 - 8896678
Alignment:
Q  197 tgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatg 296  Q
    |||||||||||| ||| ||||||||||||| | |||||||| |||||||||||| |||||||||||| |||| |  |||||||||| |||||  ||| ||    
T  8896556 tgtggcaacctgaacctcacacaaatagaaaagaaagtgtgattgtgagatgaatttaccaaaatattcctattgtatagggtgtacaatggaatgtgtg 8896655  T
Q  297 aataaagggtgttcatgtaacat 319  Q
    |||||||||||||||||||||||    
T  8896656 aataaagggtgttcatgtaacat 8896678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 197 - 319
Target Start/End: Original strand, 34817749 - 34817871
Alignment:
Q  197 tgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatg 296  Q
    |||||||||||||| |||  |||||||||||| ||||||||||||||||||||| |||||||||| | | || | ||| ||||||| |||| ||||| ||    
T  34817749 tgtggcaacctggatcccgtacaaatagaagagaaagtgtggttgtgagatgaatttaccaaaatgtgcgtagtgcatggggtgtacaatgaggtgtgtg 34817848  T
Q  297 aataaagggtgttcatgtaacat 319  Q
    |||||||||||||||||||||||    
T  34817849 aataaagggtgttcatgtaacat 34817871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 198 - 282
Target Start/End: Original strand, 42849833 - 42849916
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgta 282  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  42849833 gtggcaacttggaccccacacaaatagaa-ataaagtgtggttgtgagatgaacttatcaaaatatccctaatacatggggtgta 42849916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 225 - 319
Target Start/End: Complemental strand, 43114656 - 43114562
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||||| ||||||||||||||| |||||||||| |||||||| ||| ||||||| ||| |||||||||| |||||||||||||||||||||    
T  43114656 aagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacat 43114562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 225 - 319
Target Start/End: Original strand, 11825655 - 11825749
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||||| || |||||||||||| |||||||||| |||||||| ||| ||||||| ||| |||||||||| |||||||||||||||||||||    
T  11825655 aagagaaagtatgattgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacat 11825749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 225 - 319
Target Start/End: Original strand, 41281975 - 41282069
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||||| ||||||||||||||| ||| |||||| |||||||| ||| ||||||| ||| |||||||||| |||||||||||||||||||||    
T  41281975 aagagaaagtatggttgtgagatgaaattatcaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacat 41282069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 319
Target Start/End: Complemental strand, 42026892 - 42026772
Alignment:
Q  201 gcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaata 300  Q
    ||||||| |||||||||||||||||| | ||||||| ||||||||||||| || |||||||||||||||| |   || |||| |||||  ||||||||||    
T  42026892 gcaacctagaccccacacaaatagaaaagaaagtgtagttgtgagatgaatttgccaaaatatccctaatgcgcgggatgtacaatggaatgtatgaata 42026793  T
Q  301 aa--gggtgttcatgtaacat 319  Q
    ||  |||||||||||||||||    
T  42026792 aattgggtgttcatgtaacat 42026772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 225 - 319
Target Start/End: Original strand, 12415461 - 12415555
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||||| |||||||||||| || |||||||||| |||||||| ||| ||||||| |||  ||||||||| |||||||||||||||||||||    
T  12415461 aagagaaagtatggttgtgagataaaattaccaaaatgtccctaatgcatggggtgtacaataaggtgtatgattaaagggtgttcatgtaacat 12415555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 225 - 319
Target Start/End: Original strand, 12427521 - 12427615
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||||| |||||||||||| || |||||||||| |||||||| ||| ||||||| |||  ||||||||| |||||||||||||||||||||    
T  12427521 aagagaaagtatggttgtgagataaaattaccaaaatgtccctaatgcatggggtgtacaataaggtgtatgattaaagggtgttcatgtaacat 12427615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 225 - 319
Target Start/End: Complemental strand, 16804067 - 16803973
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||||| ||||||||||||||| ||| |||||| |||||||| ||| || |||| ||| |||||||||| |||||||||||||||||||||    
T  16804067 aagagaaagtatggttgtgagatgaaattatcaaaatgtccctaatgcatgggatgtacaatagggtgtatgattaaagggtgttcatgtaacat 16803973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 225 - 319
Target Start/End: Complemental strand, 16843349 - 16843255
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||||| ||||||||||||||| ||| |||||| |||||||| ||| || |||| ||| |||||||||| |||||||||||||||||||||    
T  16843349 aagagaaagtatggttgtgagatgaaattatcaaaatgtccctaatgcatgggatgtacaatagggtgtatgattaaagggtgttcatgtaacat 16843255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 230 - 315
Target Start/End: Complemental strand, 33229396 - 33229310
Alignment:
Q  230 aaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaat-aaagggtgttcatgta 315  Q
    |||||||| ||||  |||||||||||||||||||||||||||||| ||||||| |||| |||||| |||| ||||||||||||||||    
T  33229396 aaagtgtgattgtatgatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaaagggtgttcatgta 33229310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 212 - 282
Target Start/End: Original strand, 39149280 - 39149350
Alignment:
Q  212 cccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgta 282  Q
    |||||||||||| |||||||||||| |||||| |||||||||||||||||||| |||||||||||| ||||    
T  39149280 cccacacaaataaaagataaagtgtagttgtgggatgaacttaccaaaatatctctaatacataggatgta 39149350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 225 - 318
Target Start/End: Original strand, 34895742 - 34895835
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaaca 318  Q
    |||||||||| || |||||||||||| ||||||| || |||||||| ||| ||||||| ||| |||||| ||| |||| |||||||||||||||    
T  34895742 aagataaagtatgattgtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaaca 34895835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 231 - 319
Target Start/End: Complemental strand, 18491798 - 18491710
Alignment:
Q  231 aagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||||||||||||||| |||||||||| | | |||| |||  |||||| ||| |||||||||| |||||||||||||||||||||    
T  18491798 aagtatggttgtgagatgaatttaccaaaatgttcttaatgcatgaggtgtacaatagggtgtatgattaaagggtgttcatgtaacat 18491710  T

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Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 319
Target Start/End: Original strand, 966835 - 966929
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||||| || |||||||||||| |||||||||  | | |||| ||| ||||||| ||| |||||||||| |||||||||||||||||||||    
T  966835 aagagaaagtatgtttgtgagatgaatttaccaaaacgttcttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacat 966929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 239 - 319
Target Start/End: Original strand, 6518484 - 6518563
Alignment:
Q  239 ttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||||||||||| |||||||||| |||||||| ||| ||||||| ||| | |||||||| |||| ||||||||||||||||    
T  6518484 ttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagagtgtatgattaaa-ggtgttcatgtaacat 6518563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 309
Target Start/End: Complemental strand, 14285758 - 14285691
Alignment:
Q  242 tgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgtt 309  Q
    ||||||||| |||||||||||||  ||||| |||||||||| ||| |||||||||| |||||||||||    
T  14285758 tgagatgaatttaccaaaatatctttaatatatagggtgtacaatagggtgtatgattaaagggtgtt 14285691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 282
Target Start/End: Original strand, 4451951 - 4452008
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgta 282  Q
    |||| ||||| ||||||||||||||| ||||||||||||||||||| |||| ||||||    
T  4451951 aagagaaagtatggttgtgagatgaatttaccaaaatatccctaatgcatatggtgta 4452008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 239 - 319
Target Start/End: Original strand, 4299435 - 4299515
Alignment:
Q  239 ttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||||||||||| |||||||||| ||  |||| ||| | ||||| ||| |||||||||| |||||||||||||| ||||||    
T  4299435 ttgtgagatgaatttaccaaaatgtcattaatgcatggagtgtacaatagggtgtatgattaaagggtgttcatataacat 4299515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 235 - 319
Target Start/End: Complemental strand, 7070505 - 7070421
Alignment:
Q  235 gtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||||||| ||||||| ||| |||||| |||| |||| || | |  || |||||| |||||||||||||||||||||||||||||    
T  7070505 gtggttgtaagatgaatttatcaaaatgtccccaataaatggaggttacaatgggatgtatgaataaagggtgttcatgtaacat 7070421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 99
Target Start/End: Original strand, 27197735 - 27197775
Alignment:
Q  59 tttatttaagggttaatagtgtttttcaacgctgtaatata 99  Q
    |||||||||||||||||||||||||||| | ||||||||||    
T  27197735 tttatttaagggttaatagtgtttttcacccctgtaatata 27197775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 99
Target Start/End: Original strand, 27853162 - 27853202
Alignment:
Q  59 tttatttaagggttaatagtgtttttcaacgctgtaatata 99  Q
    |||||||||||||||||||||||||||| | ||||||||||    
T  27853162 tttatttaagggttaatagtgtttttcacccctgtaatata 27853202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 64 - 103
Target Start/End: Original strand, 44353898 - 44353937
Alignment:
Q  64 ttaagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    ||||||||||||||||||||||| | ||||||||||||||    
T  44353898 ttaagggttaatagtgtttttcacccctgtaatatatgtc 44353937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 103
Target Start/End: Original strand, 5513477 - 5513518
Alignment:
Q  62 atttaagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    ||||| ||||||||||||||||||| | ||||||||||||||    
T  5513477 atttatgggttaatagtgtttttcacccctgtaatatatgtc 5513518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 5863184 - 5863221
Alignment:
Q  66 aagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  5863184 aagggttaatagtgtttttcacccctgtaatatatgtc 5863221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 12883080 - 12883117
Alignment:
Q  66 aagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  12883080 aagggttaatagtgtttttcacccctgtaatatatgtc 12883117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 20891890 - 20891845
Alignment:
Q  58 atttatttaagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||| ||| |||||||||||||||||||| | ||||||||||||||    
T  20891890 attttttttagggttaatagtgtttttcatccctgtaatatatgtc 20891845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 20962042 - 20962079
Alignment:
Q  66 aagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  20962042 aagggttaatagtgtttttcacccctgtaatatatgtc 20962079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 20962335 - 20962294
Alignment:
Q  62 atttaagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||| |||||||||||||||||||| | ||||||||||||||    
T  20962335 attttagggttaatagtgtttttcacccctgtaatatatgtc 20962294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 23081081 - 23081044
Alignment:
Q  66 aagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  23081081 aagggttaatagtgtttttcacccctgtaatatatgtc 23081044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 1591827 - 1591863
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||| | ||||||||||||||    
T  1591827 agggttaatagtgtttttcatccctgtaatatatgtc 1591863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 2077043 - 2077079
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||| | ||||||||||||||    
T  2077043 agggttaatagtgtttttcacccctgtaatatatgtc 2077079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 2077329 - 2077293
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||| | ||||||||||||||    
T  2077329 agggttaatagtgtttttcacccctgtaatatatgtc 2077293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 5513769 - 5513733
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||| | ||||||||||||||    
T  5513769 agggttaatagtgtttttcacccctgtaatatatgtc 5513733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 5529210 - 5529174
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||| | ||||||||||||||    
T  5529210 agggttaatagtgtttttcacccctgtaatatatgtc 5529174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 8224388 - 8224424
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||| | ||||||||||||||    
T  8224388 agggttaatagtgtttttcacccctgtaatatatgtc 8224424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 27926932 - 27926968
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||| | ||||||||||||||    
T  27926932 agggttaatagtgtttttcacccctgtaatatatgtc 27926968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 36202119 - 36202155
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||| | ||||||||||||||    
T  36202119 agggttaatagtgtttttcacccctgtaatatatgtc 36202155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 39615869 - 39615833
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||| | ||||||||||||||    
T  39615869 agggttaatagtgtttttcacctctgtaatatatgtc 39615833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 106; Significance: 5e-53; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 5489902 - 5489781
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||    
T  5489902 gtggcaacttggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtagga 5489803  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||||||||||||||||||    
T  5489802 ataaagggtgttcatgtaacat 5489781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 43571060 - 43571181
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||| ||    
T  43571060 gtggcaacttggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtagga 43571159  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||||||||||||||||||    
T  43571160 ataaagggtgttcatgtaacat 43571181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 197 - 319
Target Start/End: Original strand, 23989496 - 23989619
Alignment:
Q  197 tgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatg 296  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| || ||| | |||||||    
T  23989496 tgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagataaatttaccaaaatatccctaatacatagggtatacaattgagtgtatg 23989595  T
Q  297 aat-aaagggtgttcatgtaacat 319  Q
    ||| ||||||||||||||||||||    
T  23989596 aataaaagggtgttcatgtaacat 23989619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 48498936 - 48499057
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||| |||||  |    
T  48498936 gtggcaacttggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagaa 48499035  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    |||||| |||||||||||||||    
T  48499036 ataaagagtgttcatgtaacat 48499057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 7447951 - 7447831
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||| ||||||| |||||| |||| ||    
T  7447951 gtggcaacttggaccccacacaaatagaagataaagtgtggttgtgagatgaacttatcaaaatatctgtaatacat-gggtgtacaatgggatgtagga 7447853  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||| ||||||||||||||    
T  7447852 ataaaggatgttcatgtaacat 7447831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 24769473 - 24769594
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||| ||||| |||||  |    
T  24769473 gtggcaacttggaccccacacaaatagaagataaagtgtggttgtgataagaacttaccaaaatatccctaatacatggggtgtacaatggagtgtagaa 24769572  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||| |||||||||| |||||    
T  24769573 ataaaaggtgttcatgaaacat 24769594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 37814904 - 37814783
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||| |||||||| ||||||| |||| | |||||||    
T  37814904 gtggcaatctggaccccacataaatagaagataaagtgtggttgtgaaatgaatttaccaaaatatccttaatacatggggtgtacaatgagatgtatga 37814805  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    |||||||||||| |||||||||    
T  37814804 ataaagggtgtttatgtaacat 37814783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 750279 - 750400
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||| ||| |||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||| |||||| ||||||| ||||||||||| ||    
T  750279 gtggtaacatggaccccacacaaatagaagataaagtgtggttttgagatgaatttatcaaaatatccctgatacatggggtgtacaatggggtgtagga 750378  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    |  ||||||||||| |||||||    
T  750379 aataagggtgttcacgtaacat 750400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 207 - 315
Target Start/End: Complemental strand, 4401445 - 4401336
Alignment:
Q  207 tggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaat-aaaggg 305  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||  ||||| |||| |||| |    
T  4401445 tggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatctctaatacatggggtgtacaatgaagtgtaggaataaaagag 4401346  T
Q  306 tgttcatgta 315  Q
    ||||||||||    
T  4401345 tgttcatgta 4401336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 50448234 - 50448355
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||||||| |||| |||||| |||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||| |||||| ||||| |||||  |    
T  50448234 gtggcaacatggaacccacaaaaatagaagataaaatgtggttgtaagatgaacttacaaaaatatccctaatacataaggtgtacaatggagtgtagaa 50448333  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    |||||| |||||||||||||||    
T  50448334 ataaagagtgttcatgtaacat 50448355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 206 - 319
Target Start/End: Original strand, 2497544 - 2497657
Alignment:
Q  206 ctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaaggg 305  Q
    ||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||| || ||||||| |||||  |||||||||||| ||    
T  2497544 ctggatcccacataaatagatgataaagtgtggttgtgagatgaacttaccaaaatatccttaatatatggggtgtacaatggaatgtatgaataaatgg 2497643  T
Q  306 tgttcatgtaacat 319  Q
    |||| |||||||||    
T  2497644 tgtttatgtaacat 2497657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 225 - 319
Target Start/End: Complemental strand, 44112776 - 44112682
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||||| ||||||||||||||| |||||||||| |||||||| ||| ||||||| ||| |||||||||| |||||||||||||||||||||    
T  44112776 aagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacat 44112682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 225 - 319
Target Start/End: Complemental strand, 48119727 - 48119633
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||||| ||||||||||||||| |||||||||||||| |||| ||| ||||||| ||| |||||||||| |||||||||||||||||||||    
T  48119727 aagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacat 48119633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 207 - 274
Target Start/End: Complemental strand, 4888160 - 4888093
Alignment:
Q  207 tggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacat 274  Q
    ||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  4888160 tggacaccacacaaatagaaaataaagtgtggttgtgagataaacttaccaaaatatccctaatacat 4888093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 225 - 319
Target Start/End: Complemental strand, 35003393 - 35003299
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||||| ||||||||||||||| |||||||||||||| ||||  || ||||||| ||| |||||||||| |||||||||||||||||||||    
T  35003393 aagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgtatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacat 35003299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 225 - 319
Target Start/End: Complemental strand, 38336017 - 38335923
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||||| ||||||||||||||| |||||||||||||| |||| ||| || |||| |||  ||||||||| |||||||||||||||||||||    
T  38336017 aagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgcatgggatgtacaataaggtgtatgattaaagggtgttcatgtaacat 38335923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 225 - 319
Target Start/End: Complemental strand, 41065252 - 41065158
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||||| ||||||||||||||| ||||||||||  ||||||| ||| ||||||| ||  |||||||||| |||||||||||||||||||||    
T  41065252 aagagaaagtatggttgtgagatgaaattaccaaaatgcccctaatgcatggggtgtacaacagggtgtatgattaaagggtgttcatgtaacat 41065158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 225 - 319
Target Start/End: Complemental strand, 46168482 - 46168388
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||||| ||||||||||||||| |||||||||||||| |||| ||| ||||||| ||| || | ||||| |||||||||||||||||||||    
T  46168482 aagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgcattgggtgtacaataggatatatgattaaagggtgttcatgtaacat 46168388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 225 - 319
Target Start/End: Original strand, 45427746 - 45427840
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||||| ||||||||||||||| |||||||||| |||||||| ||| | ||||| ||| |||||||||| |||| ||| ||||||||||||    
T  45427746 aagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgcatggagtgtacaatagggtgtatgattaaaaggtattcatgtaacat 45427840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 231 - 319
Target Start/End: Original strand, 38113202 - 38113290
Alignment:
Q  231 aagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||||||||||||||| |||||||||| ||  |||| ||| ||||||| ||| |||||||||| |||||||||||||| ||||||    
T  38113202 aagtatggttgtgagatgaatttaccaaaatgtcattaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatataacat 38113290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 319
Target Start/End: Original strand, 45639733 - 45639827
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||||| || |||||||||||| |||||||||||||| ||||  || ||||||| ||| || ||||||| ||||| |||||||||||||||    
T  45639733 aagagaaagtatgattgtgagatgaatttaccaaaatatccttaatgtatggggtgtacaataggatgtatgattaaagagtgttcatgtaacat 45639827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 319
Target Start/End: Original strand, 35000114 - 35000208
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||||| |||||||||||| || ||| |||||| ||||||||||||   || || ||| | |||||||| |||| ||||||||||||||||    
T  35000114 aagagaaagtatggttgtgagataaatttatcaaaatgtccctaatacatgaagtatacaatagagtgtatgattaaaaggtgttcatgtaacat 35000208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 319
Target Start/End: Complemental strand, 45705924 - 45705830
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||||| ||||||||||||||| ||| |||||| ||| |||| ||| | ||||| ||| |  ||||||| |||||||||||||| ||||||    
T  45705924 aagagaaagtatggttgtgagatgaatttatcaaaatgtccataatgcatggagtgtacaatagaatgtatgattaaagggtgttcatataacat 45705830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 64 - 103
Target Start/End: Original strand, 22374558 - 22374597
Alignment:
Q  64 ttaagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    ||||||||||||||||||||||| | ||||||||||||||    
T  22374558 ttaagggttaatagtgtttttcacccctgtaatatatgtc 22374597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 102
Target Start/End: Complemental strand, 23284977 - 23284930
Alignment:
Q  55 ataatttatttaagggttaatagtgtttttcaacgctgtaatatatgt 102  Q
    |||||| | ||||||||||||||||||||||| | |||||||||||||    
T  23284977 ataattaaattaagggttaatagtgtttttcacccctgtaatatatgt 23284930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 102
Target Start/End: Original strand, 1613587 - 1613625
Alignment:
Q  64 ttaagggttaatagtgtttttcaacgctgtaatatatgt 102  Q
    ||||||||||||||||||||||| | |||||||||||||    
T  1613587 ttaagggttaatagtgtttttcatccctgtaatatatgt 1613625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 319
Target Start/End: Complemental strand, 14427394 - 14427352
Alignment:
Q  277 ggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||||| ||| |||||||||| |||||||||||||||||||||    
T  14427394 ggtgtacaatagggtgtatgattaaagggtgttcatgtaacat 14427352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 103
Target Start/End: Original strand, 17889516 - 17889558
Alignment:
Q  61 tatttaagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||||||||| |  |||||||||||||    
T  17889516 tatttaagggttaatagtgtttttcacccatgtaatatatgtc 17889558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 101
Target Start/End: Complemental strand, 22374848 - 22374814
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatg 101  Q
    |||||||||||||||||||||| ||||||||||||    
T  22374848 agggttaatagtgtttttcaaccctgtaatatatg 22374814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 102
Target Start/End: Complemental strand, 37216529 - 37216491
Alignment:
Q  64 ttaagggttaatagtgtttttcaacgctgtaatatatgt 102  Q
    ||||||||||||||||||||||| | |||||||||||||    
T  37216529 ttaagggttaatagtgtttttcacccctgtaatatatgt 37216491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 102
Target Start/End: Complemental strand, 40633377 - 40633339
Alignment:
Q  64 ttaagggttaatagtgtttttcaacgctgtaatatatgt 102  Q
    ||||||||||||||||||||||| | |||||||||||||    
T  40633377 ttaagggttaatagtgtttttcacccctgtaatatatgt 40633339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 12887040 - 12887003
Alignment:
Q  66 aagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  12887040 aagggttaatagtgtttttcacccctgtaatatatgtc 12887003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 163391 - 163355
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||| | ||||||||||||||    
T  163391 agggttaatagtgtttttcacccctgtaatatatgtc 163355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 1340969 - 1340933
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    ||||||||||||||||||||||  |||||||||||||    
T  1340969 agggttaatagtgtttttcaaccatgtaatatatgtc 1340933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 1613879 - 1613843
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||| | ||||||||||||||    
T  1613879 agggttaatagtgtttttcacccctgtaatatatgtc 1613843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 1819369 - 1819333
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||| | ||||||||||||||    
T  1819369 agggttaatagtgtttttcacctctgtaatatatgtc 1819333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 11586515 - 11586479
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||| | ||||||||||||||    
T  11586515 agggttaatagtgtttttcacccctgtaatatatgtc 11586479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 45323473 - 45323437
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||| | ||||||||||||||    
T  45323473 agggttaatagtgtttttcacccctgtaatatatgtc 45323437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 112781 - 112660
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||| ||    
T  112781 gtggcaatctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtagga 112682  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||||||||||||||||||    
T  112681 ataaagggtgttcatgtaacat 112660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 811 - 690
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||| |||||| ||    
T  811 gtggcaacctggactccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtagga 712  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||||||||||||||||||    
T  711 ataaagggtgttcatgtaacat 690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 94; Significance: 7e-46; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 14163 - 14283
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||  |    
T  14163 gtggcaacctggaccc-acacaaatagaagataaagtgtggttgtgagatgaacttacaaaaatatccctaatacataggatgtacaatggggtgtagaa 14261  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||||||||||||||||||    
T  14262 ataaagggtgttcatgtaacat 14283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 24491 - 24611
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||  |    
T  24491 gtggcaacctggaccc-acacaaatagaagataaagtgtggttgtgagatgaacttacaaaaatatccctaatacataggatgtacaatggggtgtagaa 24589  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||||||||||||||||||    
T  24590 ataaagggtgttcatgtaacat 24611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 7e-46; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 25051819 - 25051698
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  25051819 gtggcaacttggaccccacataaatagaagataaagtgtgattgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggggtgtagga 25051720  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    |||||| |||||||||| ||||    
T  25051719 ataaagtgtgttcatgtgacat 25051698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 197 - 319
Target Start/End: Original strand, 23204751 - 23204873
Alignment:
Q  197 tgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatg 296  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||| |||||| |||| |    
T  23204751 tgtggcaacctggaccccacataaatagaagataaagtgtggttgtgacatgaacttacaaaaatatccctaatacataggatgtacaatgggatgtagg 23204850  T
Q  297 aataaagggtgttcatgtaacat 319  Q
    ||||||| |||||||||||||||    
T  23204851 aataaagagtgttcatgtaacat 23204873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 1771240 - 1771361
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||| ||||||| ||||||||||| ||    
T  1771240 gtggcaacttggaccccacataaatagaagataaaatgtggttgtgagatgaacttatcaaaatatctctaatacatggggtgtacaatggggtgtagga 1771339  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||||||||||||||||||    
T  1771340 ataaagggtgttcatgtaacat 1771361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 23036106 - 23035985
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||| ||||||| ||    
T  23036106 gtggcaacctggaccccacataaatagaagataaagtgtggttgtgagatgaacttacaaaaatatccctaatatatagggtgtacaatagggtgtagga 23036007  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    |||||||  |||||||||||||    
T  23036006 ataaaggaggttcatgtaacat 23035985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 27550435 - 27550314
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||  |||||| ||||| |||||  |    
T  27550435 gtggcaacctggaccccacataaatagaagataaagtgtggttgtaagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagaa 27550336  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||||||||||||||||||    
T  27550335 ataaagggtgttcatgtaacat 27550314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 197 - 319
Target Start/End: Original strand, 27893815 - 27893937
Alignment:
Q  197 tgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatg 296  Q
    |||||||| || ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||| ||||||    
T  27893815 tgtggcaatcttgaccccacataaatagaagataaagtgtggttgtgagatgaaattaccaaaatatccctaatacatggggtgtacaatgggatgtatg 27893914  T
Q  297 aataaagggtgttcatgtaacat 319  Q
    |||||| |||||| |||||||||    
T  27893915 aataaatggtgtttatgtaacat 27893937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 28982796 - 28982917
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || || |||| ||| |||||||  |    
T  28982796 gtggcaacttggaccccacacaaatagaagataaagtgcggttgtgagatgaacttaccaaaatatccctaatatatgggatgtacaatagggtgtagaa 28982895  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||||||||||||||||||    
T  28982896 ataaagggtgttcatgtaacat 28982917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 35017858 - 35017738
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||| | | || ||    
T  35017858 gtggcaacttggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccct-atacatggggtgtacaatgagatatagga 35017760  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||||||||||||||||||    
T  35017759 ataaagggtgttcatgtaacat 35017738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 43514660 - 43514781
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||   ||||| ||||| ||||| ||    
T  43514660 gtggcaacctagaccccacacaaatagaagataaggtgtggttgtgagatgaacttaccaaaataaccctaatacatgaagtgtacaatggagtgtagga 43514759  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||||||||||||||||||    
T  43514760 ataaagggtgttcatgtaacat 43514781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 55966320 - 55966441
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    ||||||| || ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||| |||||| |||||||    
T  55966320 gtggcaatctagaccccacataaatagaagataaattgtggttgtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgggatgtatga 55966419  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    |||||||||||| |||||||||    
T  55966420 ataaagggtgtttatgtaacat 55966441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 197 - 319
Target Start/End: Complemental strand, 27864691 - 27864569
Alignment:
Q  197 tgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatg 296  Q
    ||||| || ||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||    
T  27864691 tgtggtaatctgaaccccacataaatagaaaataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatg 27864592  T
Q  297 aataaagggtgttcatgtaacat 319  Q
    |||||| |||||| |||||||||    
T  27864591 aataaatggtgtttatgtaacat 27864569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 33703267 - 33703146
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||  | ||||  |    
T  33703267 gtggcaacttggatcccgcacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaataagatgtagaa 33703168  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||||||||||||||||||    
T  33703167 ataaagggtgttcatgtaacat 33703146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 199 - 319
Target Start/End: Complemental strand, 28988598 - 28988478
Alignment:
Q  199 tggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaa 298  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||| |||||| |||||| | ||| ||||||| |||| ||||||||||    
T  28988598 tggcaacctggaccccacacaaatagaagagaaagtgtggttatgagatgaatttatcaaaatgtccctagtgcatggggtgtacaatgaggtgtatgaa 28988499  T
Q  299 taaagggtgttcatgtaacat 319  Q
    |||||||||||||||||||||    
T  28988498 taaagggtgttcatgtaacat 28988478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 27316687 - 27316808
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    |||||||| ||||| ||| | |||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||| |||||| ||    
T  27316687 gtggcaacttggactccaaataaatagaagataaagtgtggttatgagatgaacttaccaaaatatccttaatacatggggtgtataatgaggtgtagga 27316786  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||||||||| | ||||||    
T  27316787 ataaagggtgttcgtttaacat 27316808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 206 - 319
Target Start/End: Complemental strand, 41878524 - 41878411
Alignment:
Q  206 ctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaaggg 305  Q
    ||||||||||||||||||||||| || || ||||||||||||||||||| |||||||||||||||  |||||||||| |||| ||||||||||||||| |    
T  41878524 ctggaccccacacaaatagaagagaaggtttggttgtgagatgaacttatcaaaatatccctaatggatagggtgtacaatgaggtgtatgaataaagag 41878425  T
Q  306 tgttcatgtaacat 319  Q
    ||||||||||||||    
T  41878424 tgttcatgtaacat 41878411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 210 - 315
Target Start/End: Complemental strand, 39631215 - 39631109
Alignment:
Q  210 accccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaat-aaagggtgt 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||| |||||| |||| |||||| ||    
T  39631215 accccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaaagggggt 39631116  T
Q  309 tcatgta 315  Q
    |||||||    
T  39631115 tcatgta 39631109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 207 - 315
Target Start/End: Original strand, 43949784 - 43949893
Alignment:
Q  207 tggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaat-aaaggg 305  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||| | |||| ||||||    
T  43949784 tggatcccgcacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgcaggaataaaaggg 43949883  T
Q  306 tgttcatgta 315  Q
    ||||||||||    
T  43949884 tgttcatgta 43949893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 197 - 319
Target Start/End: Original strand, 41327516 - 41327638
Alignment:
Q  197 tgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatg 296  Q
    |||||||||||||||||||||||||| ||||| ||||||||| ||||||||||| |||||||||| ||| || | |||| |||||| |||||||||| ||    
T  41327516 tgtggcaacctggaccccacacaaattgaagagaaagtgtggatgtgagatgaatttaccaaaatgtccgtagtgcataaggtgtacaatggggtgtgtg 41327615  T
Q  297 aataaagggtgttcatgtaacat 319  Q
    ||||||||||||  |||||||||    
T  41327616 aataaagggtgtctatgtaacat 41327638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 214 - 319
Target Start/End: Complemental strand, 12497066 - 12496961
Alignment:
Q  214 cacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatg 313  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||| || |||| ||||| ||||| |||||||||||||||||     
T  12497066 cacacaaatagaagataaagtgtgattgtaagatgaacttaccaaaatatctctaatacatgggatgtacaatggagtgtaggaataaagggtgttcata 12496967  T
Q  314 taacat 319  Q
    ||||||    
T  12496966 taacat 12496961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 21687132 - 21687011
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    ||||||||||| || ||| |||||||||||||||||| ||||| |||||||||||||| |||||||  |||||||||| | ||||||||||||||||  |    
T  21687132 gtggcaacctgaactccagacaaatagaagataaagtatggttatgagatgaacttactaaaatatttctaatacataagatgtataatggggtgtaaaa 21687033  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    ||||||| ||||||||||||||    
T  21687032 ataaaggatgttcatgtaacat 21687011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 210 - 319
Target Start/End: Complemental strand, 31681016 - 31680907
Alignment:
Q  210 accccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgtt 309  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||| |||||  |||||||||||| ||||||    
T  31681016 accccacataaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatatacggggtgtacaatggaatgtatgaataaatggtgtt 31680917  T
Q  310 catgtaacat 319  Q
     | |||||||    
T  31680916 tacgtaacat 31680907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 202 - 316
Target Start/End: Complemental strand, 43735864 - 43735750
Alignment:
Q  202 caacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataa 301  Q
    |||| |||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||| |  ||||||||| | |||| ||||||    
T  43735864 caacttggatcccacacaaatagaagataaagtgtgattgtgagatgaacttatcaaaatatctctaatacatggaatgtataatgagatgtaggaataa 43735765  T
Q  302 agggtgttcatgtaa 316  Q
    ||| |||||||||||    
T  43735764 aggatgttcatgtaa 43735750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 197 - 319
Target Start/End: Original strand, 48463423 - 48463545
Alignment:
Q  197 tgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatg 296  Q
    ||||| || ||| |||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| || |||| ||||   ||||||    
T  48463423 tgtggtaatctgaaccccacataaatagaaaataaagtatggttgtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaaatgtatg 48463522  T
Q  297 aataaagggtgttcatgtaacat 319  Q
    |||||| |||||| |||||||||    
T  48463523 aataaatggtgtttatgtaacat 48463545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 45490287 - 45490408
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatga 297  Q
    ||||||||||||| |||  |||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||  |||||| ||| || ||||| |    
T  45490287 gtggcaacctggatcccgtacaaatagaagataaagtgtggttgtgagatgaatttactaaagtatccctaatacatgaggtgtacaattggatgtataa 45490386  T
Q  298 ataaagggtgttcatgtaacat 319  Q
    |||||  |||||||||||||||    
T  45490387 ataaaatgtgttcatgtaacat 45490408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 198 - 282
Target Start/End: Original strand, 51512239 - 51512323
Alignment:
Q  198 gtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgta 282  Q
    |||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||| ||||||||| |||||||    
T  51512239 gtggcaacctggaccccacacaaataaaagataaagtgtggttataagatgaacttaccaaaatatctctaatacatggggtgta 51512323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 225 - 319
Target Start/End: Complemental strand, 712059 - 711965
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||||| || |||||||||||| |||||||||||||| |||| ||||||||||| ||| |||||||||| |||||||||||||||||||||    
T  712059 aagagaaagtatgtttgtgagatgaatttaccaaaatatccttaatgcatagggtgtacaatagggtgtatgattaaagggtgttcatgtaacat 711965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 225 - 319
Target Start/End: Original strand, 17619153 - 17619247
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||||| ||||||||||||||| |||||||||||||| |||| ||| ||||||| ||| |||||||||| |||| ||||||||||||||||    
T  17619153 aagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaaaggtgttcatgtaacat 17619247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 197 - 319
Target Start/End: Complemental strand, 41848098 - 41847976
Alignment:
Q  197 tgtggcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatg 296  Q
    |||| ||| ||| ||||||||||||||||||| |||||||||||||| |||||| || ||||||| || ||||| ||| ||||||| |||| ||||| ||    
T  41848098 tgtgacaatctgaaccccacacaaatagaagagaaagtgtggttgtgcgatgaatttgccaaaatgtctctaatgcatggggtgtacaatgaggtgtgtg 41847999  T
Q  297 aataaagggtgttcatgtaacat 319  Q
    || ||||| ||||| ||||||||    
T  41847998 aaaaaaggatgttcttgtaacat 41847976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 225 - 319
Target Start/End: Original strand, 55272377 - 55272471
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||||| ||||||||||||||| |||||||||||||| |||| ||| ||||||| ||| | |||||||| |||||| ||||||||||||||    
T  55272377 aagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagagtgtatgattaaaggatgttcatgtaacat 55272471  T

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Target: chr4; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 210 - 271
Target Start/End: Original strand, 46412455 - 46412516
Alignment:
Q  210 accccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaata 271  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  46412455 accccacataaatagaagataaagtgtggttgtgagaagaacttaccaaaatatctctaata 46412516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 230 - 319
Target Start/End: Original strand, 3756252 - 3756341
Alignment:
Q  230 aaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    ||||| || ||||||||| || |||| ||||||||| |||| ||| ||||||| ||| |||||||||| |||||||||||||||||||||    
T  3756252 aaagtatgattgtgagataaatttactaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacat 3756341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 225 - 318
Target Start/End: Original strand, 48435580 - 48435673
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaaca 318  Q
    |||||||||| || |||||||||||| ||||||| || |||||||| ||| ||||||| ||| |||||| ||| |||| |||||||||||||||    
T  48435580 aagataaagtatgattgtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaaca 48435673  T

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Target: chr4; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 244 - 319
Target Start/End: Original strand, 960890 - 960965
Alignment:
Q  244 agatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    ||||||| |||||||||| ||||||||  |||||||||| ||| | |||||||| |||||||||||||||||||||    
T  960890 agatgaatttaccaaaatgtccctaatgtatagggtgtacaatagagtgtatgattaaagggtgttcatgtaacat 960965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 236 - 319
Target Start/End: Complemental strand, 35037093 - 35037010
Alignment:
Q  236 tggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    ||||||||||||||| |||||||||||||| |||| ||| ||||||| ||| | |||||||  ||||||||| |||||||||||    
T  35037093 tggttgtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagagtgtatggttaaagggtgctcatgtaacat 35037010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 319
Target Start/End: Complemental strand, 32728456 - 32728362
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||||| || |||||||||||| |||| ||||| ||| |||| ||| ||||||| ||| |||||||||| |||||| ||||||||||||||    
T  32728456 aagagaaagtatgattgtgagatgaatttactaaaatgtccttaatgcatggggtgtacaatagggtgtatgattaaaggatgttcatgtaacat 32728362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 283
Target Start/End: Original strand, 56215875 - 56215956
Alignment:
Q  201 gcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtat 283  Q
    ||||||| ||||||||||||||||| || |||||||||||||||||| || || |||||||||| ||||| |||||| |||||    
T  56215875 gcaacctagaccccacacaaataga-gagaaagtgtggttgtgagataaattttccaaaatatcgctaatgcataggatgtat 56215956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 15323419 - 15323464
Alignment:
Q  58 atttatttaagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    ||||| ||||||||||||||||||||||| | ||||||||||||||    
T  15323419 atttaattaagggttaatagtgtttttcacccctgtaatatatgtc 15323464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 319
Target Start/End: Original strand, 46827721 - 46827801
Alignment:
Q  239 ttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    ||||||||| || |||||||||  | | |||| ||| ||||||| ||| | |||||||| |||||||||||||||||||||    
T  46827721 ttgtgagataaatttaccaaaacgttcttaatgcattgggtgtacaatagagtgtatgattaaagggtgttcatgtaacat 46827801  T

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Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 62 - 101
Target Start/End: Original strand, 39534057 - 39534096
Alignment:
Q  62 atttaagggttaatagtgtttttcaacgctgtaatatatg 101  Q
    ||||||||||||||||||||||||| | ||||||||||||    
T  39534057 atttaagggttaatagtgtttttcacccctgtaatatatg 39534096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 101
Target Start/End: Original strand, 13168775 - 13168817
Alignment:
Q  59 tttatttaagggttaatagtgtttttcaacgctgtaatatatg 101  Q
    |||| ||||||||||||||||||||||| | ||||||||||||    
T  13168775 tttaattaagggttaatagtgtttttcacccctgtaatatatg 13168817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 103
Target Start/End: Complemental strand, 13578961 - 13578911
Alignment:
Q  53 ttataatttatttaagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||| | | ||||||||||||||||||||| | ||||||||||||||    
T  13578961 ttataattaaataaagggttaatagtgtttttcacctctgtaatatatgtc 13578911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 103
Target Start/End: Complemental strand, 49626866 - 49626828
Alignment:
Q  65 taagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||||| | ||||||||||||||    
T  49626866 taagggttaatagtgtttttcatccctgtaatatatgtc 49626828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 32682 - 32645
Alignment:
Q  66 aagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  32682 aagggttaatagtgtttttcacccctgtaatatatgtc 32645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 11347512 - 11347467
Alignment:
Q  58 atttatttaagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||| |||| ||||||||| | ||||||||||||||    
T  11347512 atttatttaagggtcaataatgtttttcatccctgtaatatatgtc 11347467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 49633223 - 49633186
Alignment:
Q  66 aagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  49633223 aagggttaatagtgtttttcatccctgtaatatatgtc 49633186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 19675895 - 19675859
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||| | ||||||||||||||    
T  19675895 agggttaatagtgtttttcacccctgtaatatatgtc 19675859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 99
Target Start/End: Original strand, 23943882 - 23943918
Alignment:
Q  63 tttaagggttaatagtgtttttcaacgctgtaatata 99  Q
    |||||||||||||||||||||||| | ||||||||||    
T  23943882 tttaagggttaatagtgtttttcacccctgtaatata 23943918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 49236585 - 49236549
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||| | ||||||||||||||    
T  49236585 agggttaatagtgtttttcacccctgtaatatatgtc 49236549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 54442269 - 54442233
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||| | ||||||||||||||    
T  54442269 agggttaatagtgtttttcacccctgtaatatatgtc 54442233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 201 - 319
Target Start/End: Complemental strand, 11374 - 11256
Alignment:
Q  201 gcaacctggaccccacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaata 300  Q
    ||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||    
T  11374 gcaacttggaccccacatcaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatatatggggtgtacaatggggtgtatgaata 11275  T
Q  301 aagggtgttcatgtaacat 319  Q
    ||| |||||||||| ||||    
T  11274 aagtgtgttcatgtgacat 11256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 214 - 319
Target Start/End: Original strand, 23411 - 23516
Alignment:
Q  214 cacacaaatagaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatg 313  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||| || |||| ||||| ||||| |||||||||||||||||     
T  23411 cacacaaatagaagataaagtgtgattgtaagatgaacttaccaaaatatctctaatacatgggatgtacaatggagtgtaggaataaagggtgttcata 23510  T
Q  314 taacat 319  Q
    ||||||    
T  23511 taacat 23516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 225 - 319
Target Start/End: Original strand, 45720 - 45814
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||||| ||||||||||||||| |||||||||||||| ||||||||||| |||| ||| |||||||||| |||||||||||||||||||||    
T  45720 aagagaaagtatggttgtgagatgaatttaccaaaatatccttaatacataggatgtacaatagggtgtatgattaaagggtgttcatgtaacat 45814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 319
Target Start/End: Original strand, 35457 - 35551
Alignment:
Q  225 aagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatggggtgtatgaataaagggtgttcatgtaacat 319  Q
    |||| ||||| ||||||||||||||| ||||||| || |||||||| ||| ||||||| |||  ||||||||| |||| |||||| |||||||||    
T  35457 aagagaaagtatggttgtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatatggtgtatgattaaatggtgtttatgtaacat 35551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 103
Target Start/End: Complemental strand, 4533 - 4495
Alignment:
Q  65 taagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||||| | ||||||||||||||    
T  4533 taagggttaatagtgtttttcacccctgtaatatatgtc 4495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0744 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 1558 - 1521
Alignment:
Q  66 aagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  1558 aagggttaatagtgtttttcacccctgtaatatatgtc 1521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 25052 - 25015
Alignment:
Q  66 aagggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  25052 aagggttaatagtgtttttcacccctgtaatatatgtc 25015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 102
Target Start/End: Complemental strand, 1905 - 1869
Alignment:
Q  66 aagggttaatagtgtttttcaacgctgtaatatatgt 102  Q
    ||||||||||||||||||||| | |||||||||||||    
T  1905 aagggttaatagtgtttttcacccctgtaatatatgt 1869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 24190 - 24226
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||| | ||||||||||||||    
T  24190 agggttaatagtgtttttcacccctgtaatatatgtc 24226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 4246 - 4210
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||| | ||||||||||||||    
T  4246 agggttaatagtgtttttcacccctgtaatatatgtc 4210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 96730 - 96694
Alignment:
Q  67 agggttaatagtgtttttcaacgctgtaatatatgtc 103  Q
    |||||||||||||||||||| | ||||||||||||||    
T  96730 agggttaatagtgtttttcacccctgtaatatatgtc 96694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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