View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20775_low_50 (Length: 256)

Name: NF20775_low_50
Description: NF20775
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20775_low_50
NF20775_low_50
[»] chr2 (15 HSPs)
chr2 (182-242)||(6946403-6946463)
chr2 (180-234)||(24725652-24725705)
chr2 (194-242)||(15320464-15320512)
chr2 (194-241)||(21480659-21480706)
chr2 (189-234)||(5862532-5862577)
chr2 (189-242)||(11678163-11678216)
chr2 (189-242)||(11695641-11695694)
chr2 (192-241)||(30759488-30759537)
chr2 (57-129)||(26602396-26602468)
chr2 (193-235)||(30761604-30761646)
chr2 (193-241)||(11651023-11651071)
chr2 (194-242)||(27962528-27962576)
chr2 (197-233)||(30514813-30514849)
chr2 (197-241)||(43452320-43452364)
chr2 (194-242)||(44085653-44085701)
[»] chr8 (16 HSPs)
chr8 (180-240)||(14185715-14185775)
chr8 (49-129)||(28744568-28744648)
chr8 (192-243)||(6591399-6591450)
chr8 (194-242)||(28073073-28073121)
chr8 (194-242)||(36340615-36340663)
chr8 (194-237)||(41346081-41346124)
chr8 (196-242)||(9012706-9012752)
chr8 (196-242)||(18755197-18755243)
chr8 (194-240)||(40436605-40436651)
chr8 (193-234)||(7428292-7428333)
chr8 (197-242)||(13325466-13325511)
chr8 (62-119)||(28641361-28641418)
chr8 (205-242)||(30253996-30254033)
chr8 (189-242)||(33566119-33566172)
chr8 (194-242)||(11017177-11017225)
chr8 (205-241)||(28801796-28801832)
[»] chr4 (26 HSPs)
chr4 (62-129)||(8690756-8690823)
chr4 (182-241)||(35233142-35233201)
chr4 (189-242)||(29232914-29232967)
chr4 (180-241)||(51907250-51907311)
chr4 (182-242)||(29700895-29700955)
chr4 (182-237)||(4688863-4688918)
chr4 (189-242)||(27743366-27743419)
chr4 (198-242)||(6102053-6102097)
chr4 (194-238)||(45226545-45226589)
chr4 (189-242)||(3349783-3349836)
chr4 (189-242)||(23625763-23625816)
chr4 (180-241)||(25686303-25686363)
chr4 (194-242)||(19753371-19753419)
chr4 (194-242)||(19786387-19786435)
chr4 (54-129)||(5408161-5408236)
chr4 (194-241)||(17845070-17845117)
chr4 (186-237)||(18881889-18881940)
chr4 (194-241)||(45150824-45150871)
chr4 (189-242)||(21069221-21069275)
chr4 (194-239)||(10778340-10778385)
chr4 (194-235)||(12916560-12916601)
chr4 (197-242)||(20986564-20986609)
chr4 (202-239)||(28147951-28147988)
chr4 (212-241)||(48684962-48684991)
chr4 (194-242)||(8312058-8312106)
chr4 (202-242)||(54273894-54273934)
[»] chr7 (26 HSPs)
chr7 (180-242)||(2854467-2854529)
chr7 (194-242)||(16535617-16535665)
chr7 (194-242)||(16629997-16630045)
chr7 (196-242)||(23729541-23729587)
chr7 (194-242)||(37375493-37375541)
chr7 (189-242)||(22298697-22298751)
chr7 (197-242)||(1812646-1812691)
chr7 (189-242)||(11834328-11834381)
chr7 (180-241)||(26524779-26524840)
chr7 (189-242)||(34751158-34751211)
chr7 (194-242)||(6879965-6880013)
chr7 (193-241)||(21237630-21237678)
chr7 (194-242)||(35819941-35819989)
chr7 (180-235)||(2734522-2734577)
chr7 (193-240)||(27215046-27215093)
chr7 (197-242)||(8568416-8568461)
chr7 (189-234)||(16359335-16359380)
chr7 (189-242)||(43908838-43908891)
chr7 (192-237)||(47483804-47483849)
chr7 (186-242)||(7697454-7697510)
chr7 (194-242)||(8118150-8118198)
chr7 (193-241)||(20306785-20306833)
chr7 (196-240)||(20334751-20334795)
chr7 (194-242)||(30079453-30079501)
chr7 (182-242)||(32941937-32941997)
chr7 (194-234)||(48642961-48643001)
[»] chr1 (20 HSPs)
chr1 (196-242)||(21685421-21685467)
chr1 (20-129)||(18301474-18301583)
chr1 (186-242)||(26344909-26344965)
chr1 (194-242)||(35375333-35375381)
chr1 (189-242)||(40095275-40095328)
chr1 (189-241)||(25507045-25507097)
chr1 (194-242)||(39167136-39167184)
chr1 (189-231)||(32937931-32937973)
chr1 (194-242)||(6248246-6248294)
chr1 (194-234)||(12973742-12973782)
chr1 (194-242)||(25532883-25532931)
chr1 (194-233)||(18310116-18310155)
chr1 (180-235)||(29923152-29923207)
chr1 (194-241)||(39158176-39158223)
chr1 (195-242)||(51231930-51231977)
chr1 (189-231)||(27350816-27350858)
chr1 (196-242)||(32910235-32910281)
chr1 (197-234)||(3935633-3935670)
chr1 (197-238)||(11536965-11537006)
chr1 (189-242)||(41751313-41751366)
[»] chr6 (13 HSPs)
chr6 (189-242)||(24644818-24644871)
chr6 (189-242)||(16971607-16971660)
chr6 (189-241)||(22413970-22414022)
chr6 (193-237)||(8064673-8064717)
chr6 (194-242)||(11417235-11417283)
chr6 (194-242)||(13532144-13532192)
chr6 (62-130)||(32519224-32519292)
chr6 (193-236)||(4563044-4563087)
chr6 (182-241)||(19134949-19135007)
chr6 (186-235)||(4577276-4577325)
chr6 (197-234)||(7169954-7169991)
chr6 (182-223)||(30752738-30752779)
chr6 (194-242)||(20500726-20500774)
[»] chr3 (19 HSPs)
chr3 (194-242)||(25465971-25466019)
chr3 (194-242)||(37045479-37045527)
chr3 (194-242)||(45915075-45915123)
chr3 (198-242)||(4280450-4280494)
chr3 (194-242)||(25858358-25858406)
chr3 (189-242)||(2566196-2566249)
chr3 (197-242)||(5640597-5640642)
chr3 (189-242)||(55467505-55467558)
chr3 (194-242)||(20038553-20038601)
chr3 (62-113)||(23316249-23316300)
chr3 (48-91)||(28262052-28262095)
chr3 (196-242)||(35143125-35143171)
chr3 (197-242)||(5671872-5671917)
chr3 (197-242)||(5681369-5681414)
chr3 (189-242)||(45629359-45629412)
chr3 (196-241)||(55129906-55129951)
chr3 (194-234)||(8557818-8557858)
chr3 (180-228)||(38681414-38681462)
chr3 (194-242)||(50578867-50578915)
[»] chr5 (20 HSPs)
chr5 (186-241)||(6718771-6718826)
chr5 (195-242)||(28224730-28224777)
chr5 (180-242)||(7591411-7591473)
chr5 (196-241)||(6894269-6894314)
chr5 (180-241)||(34111614-34111675)
chr5 (189-240)||(34881185-34881236)
chr5 (194-243)||(4414387-4414436)
chr5 (189-242)||(41455039-41455092)
chr5 (194-242)||(1681289-1681337)
chr5 (189-237)||(12264048-12264096)
chr5 (194-242)||(17131945-17131993)
chr5 (179-235)||(18845702-18845758)
chr5 (194-237)||(20191797-20191840)
chr5 (194-241)||(31075476-31075523)
chr5 (194-237)||(34872364-34872407)
chr5 (193-242)||(22747431-22747480)
chr5 (189-242)||(25495256-25495309)
chr5 (196-241)||(32721334-32721379)
chr5 (194-242)||(11402764-11402812)
chr5 (194-242)||(32244241-32244289)
[»] scaffold0891 (1 HSPs)
scaffold0891 (54-129)||(727-802)
[»] scaffold0015 (1 HSPs)
scaffold0015 (194-242)||(62579-62627)
[»] scaffold0688 (2 HSPs)
scaffold0688 (194-236)||(1350-1392)
scaffold0688 (194-236)||(7919-7961)
[»] scaffold0081 (1 HSPs)
scaffold0081 (49-114)||(10722-10787)


Alignment Details
Target: chr2 (Bit Score: 49; Significance: 4e-19; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 182 - 242
Target Start/End: Original strand, 6946403 - 6946463
Alignment:
Q  182 tatgttattgggtgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  6946403 tatgttgttgggtgaaaatgaaattttaatgttggatgaaatataaaacattgttggaaat 6946463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 24725652 - 24725705
Alignment:
Q  180 tctatgttattgggtgaaaatgaaattgtaatgttggatgaaatataaaacattg 234  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  24725652 tctatgttgttgggtgaaaatgaaatt-taatgttggatgaaatataaaacattg 24725705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 15320464 - 15320512
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||||||||||||||||||||||||||||| |||||| ||||| |||||    
T  15320464 tgaaaatgaaattgtaatgttggatgaaatttaaaacgttgttaaaaat 15320512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 241
Target Start/End: Original strand, 21480659 - 21480706
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaa 241  Q
    |||||||||||||| |||||| |||||||| |||||||||||||||||    
T  21480659 tgaaaatgaaattgaaatgtttgatgaaatttaaaacattgttgaaaa 21480706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 5862532 - 5862577
Alignment:
Q  189 ttgggtgaaaatgaaattgtaatgttggatgaaatataaaacattg 234  Q
    |||| ||||||| |||||||||||||||||||||| ||||||||||    
T  5862532 ttggatgaaaataaaattgtaatgttggatgaaatttaaaacattg 5862577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 11678216 - 11678163
Alignment:
Q  189 ttgggtgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||| ||||||| ||||||||||| |||||||||| ||||| ||||||||||||    
T  11678216 ttggatgaaaataaaattgtaatgctggatgaaatttaaaatattgttgaaaat 11678163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 11695694 - 11695641
Alignment:
Q  189 ttgggtgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||| ||||||| ||||||||||| |||||||||| ||||| ||||||||||||    
T  11695694 ttggatgaaaataaaattgtaatgctggatgaaatttaaaatattgttgaaaat 11695641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 241
Target Start/End: Original strand, 30759488 - 30759537
Alignment:
Q  192 ggtgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaa 241  Q
    ||||||||| |||||||||||||||||||||| ||||| ||||| |||||    
T  30759488 ggtgaaaataaaattgtaatgttggatgaaatttaaaatattgtcgaaaa 30759537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 26602468 - 26602396
Alignment:
Q  57 ctttgtagcgggttaggcggagcgggcaccctactaatagtgggtttaaaatctcaacccaccctgctaaaaa 129  Q
    |||| ||||||||||||| ||||||||||||||||  | | ||||| ||| |||||||||||||  |||||||    
T  26602468 ctttttagcgggttaggctgagcgggcaccctacttgtggcgggttcaaattctcaacccaccccactaaaaa 26602396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 30761604 - 30761646
Alignment:
Q  193 gtgaaaatgaaattgtaatgttggatgaaatataaaacattgt 235  Q
    |||||||| |||||||||||||||||||||| ||||| |||||    
T  30761604 gtgaaaataaaattgtaatgttggatgaaatttaaaatattgt 30761646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 241
Target Start/End: Complemental strand, 11651071 - 11651023
Alignment:
Q  193 gtgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaa 241  Q
    |||||||| |||||||||| || |||||||| ||||||||||| |||||    
T  11651071 gtgaaaataaaattgtaatattagatgaaatttaaaacattgtcgaaaa 11651023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 27962528 - 27962576
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    ||||||| ||||||||| ||||||||||||  ||||||||||| |||||    
T  27962528 tgaaaataaaattgtaacgttggatgaaattaaaaacattgttaaaaat 27962576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 233
Target Start/End: Original strand, 30514813 - 30514849
Alignment:
Q  197 aaatgaaattgtaatgttggatgaaatataaaacatt 233  Q
    ||||||||||||||||||| ||||||| |||||||||    
T  30514813 aaatgaaattgtaatgttgaatgaaatttaaaacatt 30514849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 241
Target Start/End: Complemental strand, 43452364 - 43452320
Alignment:
Q  197 aaatgaaattgtaatgttggatgaaatataaaacattgttgaaaa 241  Q
    |||| |||||||| ||||||||||||| |||||||||||| ||||    
T  43452364 aaataaaattgtattgttggatgaaatttaaaacattgttaaaaa 43452320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 44085701 - 44085653
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    ||||||||||||| |||| || |||||||| |||||||||| |||||||    
T  44085701 tgaaaatgaaattataatatttgatgaaatttaaaacattgctgaaaat 44085653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 14185715 - 14185775
Alignment:
Q  180 tctatgttattgggtgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaa 240  Q
    ||||||||  ||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  14185715 tctatgttgctgggtaaaaatgaaattgtaatgttggatgaaatataaaagattgttgaaa 14185775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 129
Target Start/End: Complemental strand, 28744648 - 28744568
Alignment:
Q  49 ccgcaccgctttgtagcgggttaggcggagcgggcaccctactaatagtgggtttaaaatctcaacccaccctgctaaaaa 129  Q
    |||| ||| ||| |||| ||||||||||||||||||||||||| || |   ||| ||||||||||||||||| ||||||||    
T  28744648 ccgccccgttttttagcaggttaggcggagcgggcaccctacttatggcaagttcaaaatctcaacccaccccgctaaaaa 28744568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 243
Target Start/End: Complemental strand, 6591450 - 6591399
Alignment:
Q  192 ggtgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaatg 243  Q
    ||||||||| ||||||||||||||||||||||  |||| |||||||||||||    
T  6591450 ggtgaaaataaaattgtaatgttggatgaaattaaaaatattgttgaaaatg 6591399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 28073073 - 28073121
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    ||||||| ||||||||| ||||||| |||| ||||||||||||||||||    
T  28073073 tgaaaataaaattgtaacgttggatcaaatttaaaacattgttgaaaat 28073121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 36340615 - 36340663
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    ||||||| |||| ||||||||||||||||| |||||||||| |||||||    
T  36340615 tgaaaataaaatcgtaatgttggatgaaatttaaaacattgctgaaaat 36340663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 41346124 - 41346081
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttg 237  Q
    ||||||||||||||||||||||||| |||| | |||||||||||    
T  41346124 tgaaaatgaaattgtaatgttggataaaattttaaacattgttg 41346081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 9012706 - 9012752
Alignment:
Q  196 aaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    ||||| ||||||||||||| |||||||| ||||||||| ||||||||    
T  9012706 aaaataaaattgtaatgttcgatgaaatttaaaacattattgaaaat 9012752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 18755197 - 18755243
Alignment:
Q  196 aaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    ||||||||||||||||||| |||||||| ||||| ||| ||||||||    
T  18755197 aaaatgaaattgtaatgtttgatgaaatttaaaatatttttgaaaat 18755243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 240
Target Start/End: Complemental strand, 40436651 - 40436605
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaa 240  Q
    |||||||||||||||||| || |||||||| |||||||||| |||||    
T  40436651 tgaaaatgaaattgtaatatttgatgaaatttaaaacattgctgaaa 40436605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 234
Target Start/End: Original strand, 7428292 - 7428333
Alignment:
Q  193 gtgaaaatgaaattgtaatgttggatgaaatataaaacattg 234  Q
    |||||||| ||||||||||||| |||||||| ||||||||||    
T  7428292 gtgaaaataaaattgtaatgttagatgaaatttaaaacattg 7428333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 242
Target Start/End: Complemental strand, 13325511 - 13325466
Alignment:
Q  197 aaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||| |||||||||||||||||||||| |||||||| | |||||||    
T  13325511 aaataaaattgtaatgttggatgaaatttaaaacatcgctgaaaat 13325466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 119
Target Start/End: Complemental strand, 28641418 - 28641361
Alignment:
Q  62 tagcgggttaggcggagcgggcaccctactaatagtgggtttaaaatctcaacccacc 119  Q
    |||||||||||||||||| ||||||||||| || |   ||| ||||||||||||||||    
T  28641418 tagcgggttaggcggagcaggcaccctacttatggcaagttcaaaatctcaacccacc 28641361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 30253996 - 30254033
Alignment:
Q  205 ttgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||||| |||||||||||| ||||||||||||||||||    
T  30253996 ttgtaaagttggatgaaatttaaaacattgttgaaaat 30254033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 33566172 - 33566119
Alignment:
Q  189 ttgggtgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||| ||||||| ||||| |||||||||||||||| |||||||||  |||||||    
T  33566172 ttggatgaaaataaaattataatgttggatgaaatttaaaacattactgaaaat 33566119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 11017225 - 11017177
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    ||||||| ||||  |||||||||||||||| |||||||||| |||||||    
T  11017225 tgaaaataaaatcataatgttggatgaaatttaaaacattgctgaaaat 11017177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 241
Target Start/End: Complemental strand, 28801832 - 28801796
Alignment:
Q  205 ttgtaatgttggatgaaatataaaacattgttgaaaa 241  Q
    |||||||||||||||||||  ||||||||||||||||    
T  28801832 ttgtaatgttggatgaaattcaaaacattgttgaaaa 28801796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 4e-16; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 129
Target Start/End: Original strand, 8690756 - 8690823
Alignment:
Q  62 tagcgggttaggcggagcgggcaccctactaatagtgggtttaaaatctcaacccaccctgctaaaaa 129  Q
    |||||||||||||||||||| || ||||||||| | |||||||||||||||| |||| ||||||||||    
T  8690756 tagcgggttaggcggagcggacatcctactaatggcgggtttaaaatctcaaaccactctgctaaaaa 8690823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 182 - 241
Target Start/End: Original strand, 35233142 - 35233201
Alignment:
Q  182 tatgttattgggtgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaa 241  Q
    |||||| ||| |||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  35233142 tatgttgttgagtgagaatgaaattgtaatgttggatgaaatataaaactttgttgaaaa 35233201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 29232967 - 29232914
Alignment:
Q  189 ttgggtgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||| ||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  29232967 ttggatgaaaataaaattgtaatgttggatgaaatttaaaacattgttgaaaat 29232914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 180 - 241
Target Start/End: Complemental strand, 51907311 - 51907250
Alignment:
Q  180 tctatgttattgggtgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaa 241  Q
    ||||| || |||||||||||| ||||||||| ||||||||||||||||||||||||| ||||    
T  51907311 tctatattgttgggtgaaaataaaattgtaaagttggatgaaatataaaacattgttaaaaa 51907250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 242
Target Start/End: Complemental strand, 29700955 - 29700895
Alignment:
Q  182 tatgttattgggtgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||||| ||| || |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  29700955 tatgttgttgagtcaaaatgaaattgtaatgttgtatgaaatataaaacattgtcgaaaat 29700895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 237
Target Start/End: Complemental strand, 4688918 - 4688863
Alignment:
Q  182 tatgttattgggtgaaaatgaaattgtaatgttggatgaaatataaaacattgttg 237  Q
    |||||| |||||||||||||||||  |||||||||| |||||||||||||||||||    
T  4688918 tatgttgttgggtgaaaatgaaataataatgttggaggaaatataaaacattgttg 4688863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 27743419 - 27743366
Alignment:
Q  189 ttgggtgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||| ||||||| |||||||||||||||||||||| | ||||||||||||||||    
T  27743419 ttggctgaaaataaaattgtaatgttggatgaaattttaaacattgttgaaaat 27743366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 6102097 - 6102053
Alignment:
Q  198 aatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||||||||||||||||||||||||| |||||||| |||||||||    
T  6102097 aatgaaattgtaatgttggatgaaatttaaaacatcgttgaaaat 6102053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 238
Target Start/End: Complemental strand, 45226589 - 45226545
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttga 238  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||    
T  45226589 tgaaaatgaaattgtaatgtttgatgaaatttaaaacattgttga 45226545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 3349783 - 3349836
Alignment:
Q  189 ttgggtgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||| |||||||||| |||||| ||||||| |||| ||||||||||||||||||    
T  3349783 ttggatgaaaatgaatttgtaaagttggatcaaatttaaaacattgttgaaaat 3349836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 23625763 - 23625816
Alignment:
Q  189 ttgggtgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||| ||||||| ||||| ||||||||||| |||| ||||||||||||||||||    
T  23625763 ttggatgaaaataaaattataatgttggattaaatttaaaacattgttgaaaat 23625816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 241
Target Start/End: Original strand, 25686303 - 25686363
Alignment:
Q  180 tctatgttattgggtgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaa 241  Q
    |||||||| ||| |||||||||||| ||||||||| |||| ||||||||| |||||||||||    
T  25686303 tctatgttgttgtgtgaaaatgaaactgtaatgttcgatg-aatataaaatattgttgaaaa 25686363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 19753371 - 19753419
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    ||||||| |||| ||||||||||||||||| |||||||||| |||||||    
T  19753371 tgaaaataaaatcgtaatgttggatgaaatttaaaacattgctgaaaat 19753419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 19786435 - 19786387
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    ||||||| |||| ||||||||||||||||| |||||||||| |||||||    
T  19786435 tgaaaataaaatcgtaatgttggatgaaatttaaaacattgctgaaaat 19786387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 129
Target Start/End: Complemental strand, 5408236 - 5408161
Alignment:
Q  54 ccgctttgtagcgggttaggcggagcgggcaccctactaatagtgggtttaaaatctcaacccaccctgctaaaaa 129  Q
    ||||||| || ||||||||||||||||| ||| |||||||| |  || | ||||||||||||||| || |||||||    
T  5408236 ccgctttttaacgggttaggcggagcggacactctactaatggcaggctcaaaatctcaacccactctactaaaaa 5408161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 241
Target Start/End: Complemental strand, 17845117 - 17845070
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaa 241  Q
    ||||||| |||||||||||||||||||||| ||||| ||||| |||||    
T  17845117 tgaaaataaaattgtaatgttggatgaaatttaaaatattgtcgaaaa 17845070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 18881889 - 18881940
Alignment:
Q  186 ttattgggtgaaaatgaaattgtaatgttggatgaaatataaaacattgttg 237  Q
    ||||| ||||||||| ||||| |||||||||||||||| ||||| |||||||    
T  18881889 ttatttggtgaaaataaaattataatgttggatgaaatttaaaatattgttg 18881940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 241
Target Start/End: Original strand, 45150824 - 45150871
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaa 241  Q
    ||||||| |||| ||||||||||||||||| |||||||||| ||||||    
T  45150824 tgaaaataaaatcgtaatgttggatgaaatttaaaacattgctgaaaa 45150871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 21069275 - 21069221
Alignment:
Q  189 ttgggtgaaaatgaaattgtaatgttggatgaaatat-aaaacattgttgaaaat 242  Q
    |||| ||||||| ||||||||||||||||| |||| | |||||||||||||||||    
T  21069275 ttggatgaaaataaaattgtaatgttggattaaatttaaaaacattgttgaaaat 21069221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 10778340 - 10778385
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaa 239  Q
    ||||||| ||||||||||||||||| |||| | |||||||||||||    
T  10778340 tgaaaataaaattgtaatgttggatcaaatttgaaacattgttgaa 10778385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 12916601 - 12916560
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgt 235  Q
    ||||||||||||||| ||||| |||||||| |||||||||||    
T  12916601 tgaaaatgaaattgtgatgtttgatgaaatttaaaacattgt 12916560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 242
Target Start/End: Complemental strand, 20986609 - 20986564
Alignment:
Q  197 aaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||| ||||| |||||||||||||||| |||||||||| |||||||    
T  20986609 aaataaaattataatgttggatgaaatttaaaacattgctgaaaat 20986564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 239
Target Start/End: Complemental strand, 28147988 - 28147951
Alignment:
Q  202 aaattgtaatgttggatgaaatataaaacattgttgaa 239  Q
    |||||||||||||| ||||||| |||||||||||||||    
T  28147988 aaattgtaatgttgtatgaaatttaaaacattgttgaa 28147951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 241
Target Start/End: Complemental strand, 48684991 - 48684962
Alignment:
Q  212 gttggatgaaatataaaacattgttgaaaa 241  Q
    ||||||||||||||||||||||||||||||    
T  48684991 gttggatgaaatataaaacattgttgaaaa 48684962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 8312106 - 8312058
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||||||||||||| ||| | ||||||||| |||||||||| |||||||    
T  8312106 tgaaaatgaaattgaaatatgggatgaaatttaaaacattgctgaaaat 8312058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 54273894 - 54273934
Alignment:
Q  202 aaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    ||||||||||||||||| |||| | ||||||||||||||||    
T  54273894 aaattgtaatgttggattaaatttgaaacattgttgaaaat 54273934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 242
Target Start/End: Complemental strand, 2854529 - 2854467
Alignment:
Q  180 tctatgttattgggtgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    ||||||||||||| ||| |||||||||||||| || |||||||||||||| ||||||||||||    
T  2854529 tctatgttattggttgataatgaaattgtaatatttgatgaaatataaaatattgttgaaaat 2854467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 16535617 - 16535665
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  16535617 tgaaaatgaaattgtaattttggatgaaatttaaaacattgttgaaaat 16535665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 16630045 - 16629997
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  16630045 tgaaaatgaaattgtaattttggatgaaatttaaaacattgttgaaaat 16629997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 242
Target Start/End: Complemental strand, 23729587 - 23729541
Alignment:
Q  196 aaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||    
T  23729587 aaaatgaaattgtaatattggatgaaatttaaaacattgttgaaaat 23729541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 37375541 - 37375493
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||||||||||||||||| || |||||||| ||||||||||||||||||    
T  37375541 tgaaaatgaaattgtaatatttgatgaaatttaaaacattgttgaaaat 37375493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 22298751 - 22298697
Alignment:
Q  189 ttgggtgaaaatgaaattgtaatgttggatgaaatataaaacattg-ttgaaaat 242  Q
    |||| ||||||| |||||||||||||||||||||| |||||||||| ||||||||    
T  22298751 ttggatgaaaataaaattgtaatgttggatgaaatttaaaacattgcttgaaaat 22298697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 242
Target Start/End: Complemental strand, 1812691 - 1812646
Alignment:
Q  197 aaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||| |||||||||||||||||||||| ||||||| ||||||||||    
T  1812691 aaataaaattgtaatgttggatgaaatctaaaacactgttgaaaat 1812646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 11834328 - 11834381
Alignment:
Q  189 ttgggtgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||| ||||||| ||| ||||||||||||| |||| ||||||||||||||||||    
T  11834328 ttggatgaaaataaaactgtaatgttggataaaatttaaaacattgttgaaaat 11834381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 241
Target Start/End: Original strand, 26524779 - 26524840
Alignment:
Q  180 tctatgttattgggtgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaa 241  Q
    |||||||| ||  |||||||||||||| ||||||||||||||||  |||||||||| |||||    
T  26524779 tctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgtcgaaaa 26524840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 34751211 - 34751158
Alignment:
Q  189 ttgggtgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||| ||||||| |||||||||||||| ||||||| |||||||||| |||||||    
T  34751211 ttggatgaaaataaaattgtaatgttgtatgaaatttaaaacattgctgaaaat 34751158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 6879965 - 6880013
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||||||  |||| |||||||||||||||| ||||||||||||||||||    
T  6879965 tgaaaatttaattttaatgttggatgaaatttaaaacattgttgaaaat 6880013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 241
Target Start/End: Original strand, 21237630 - 21237678
Alignment:
Q  193 gtgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaa 241  Q
    |||||||| ||||||||||||||||||||||  |||||||||| |||||    
T  21237630 gtgaaaattaaattgtaatgttggatgaaattaaaaacattgtcgaaaa 21237678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 35819941 - 35819989
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    ||||||| |||| ||||||||||||||||| |||||||||| |||||||    
T  35819941 tgaaaataaaatcgtaatgttggatgaaatttaaaacattgctgaaaat 35819989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 2734577 - 2734522
Alignment:
Q  180 tctatgttattgggtgaaaatgaaattgtaatgttggatgaaatataaaacattgt 235  Q
    |||||||| ||  |||||||| |||||||||||||||||||||| |||| ||||||    
T  2734577 tctatgttgtttagtgaaaataaaattgtaatgttggatgaaatttaaagcattgt 2734522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 240
Target Start/End: Original strand, 27215046 - 27215093
Alignment:
Q  193 gtgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaa 240  Q
    |||||||||||||| |||||||||||| |||| |||||||||| ||||    
T  27215046 gtgaaaatgaaattttaatgttggatggaataaaaaacattgtcgaaa 27215093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 242
Target Start/End: Original strand, 8568416 - 8568461
Alignment:
Q  197 aaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||| |||||||||||||||||||||| ||||| |||||| |||||    
T  8568416 aaataaaattgtaatgttggatgaaatttaaaaaattgtttaaaat 8568461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 16359380 - 16359335
Alignment:
Q  189 ttgggtgaaaatgaaattgtaatgttggatgaaatataaaacattg 234  Q
    |||| ||||||||||||| ||||||||||| |||| ||||||||||    
T  16359380 ttggatgaaaatgaaattataatgttggataaaatttaaaacattg 16359335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 43908891 - 43908838
Alignment:
Q  189 ttgggtgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||| ||||||| ||||||||||||| ||| |||| | ||||||||||||||||    
T  43908891 ttggatgaaaataaaattgtaatgtttgatcaaatttgaaacattgttgaaaat 43908838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 47483849 - 47483804
Alignment:
Q  192 ggtgaaaatgaaattgtaatgttggatgaaatataaaacattgttg 237  Q
    ||||||||| ||||| |||||||||||||||| ||||| |||||||    
T  47483849 ggtgaaaataaaattttaatgttggatgaaatttaaaatattgttg 47483804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 242
Target Start/End: Complemental strand, 7697510 - 7697454
Alignment:
Q  186 ttattgggtgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    ||||| ||| ||||| ||| |||||||||||||||||| || ||||||| |||||||    
T  7697510 ttatttggtcaaaataaaactgtaatgttggatgaaatttataacattgctgaaaat 7697454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 8118150 - 8118198
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    ||||||| ||||||||||| | |||||||| |||||||||| |||||||    
T  8118150 tgaaaattaaattgtaatgcttgatgaaatttaaaacattgctgaaaat 8118198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 241
Target Start/End: Complemental strand, 20306833 - 20306785
Alignment:
Q  193 gtgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaa 241  Q
    |||||||| ||||||||||||||| ||||||  |||| |||||||||||    
T  20306833 gtgaaaataaaattgtaatgttggttgaaattaaaaatattgttgaaaa 20306785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 240
Target Start/End: Complemental strand, 20334795 - 20334751
Alignment:
Q  196 aaaatgaaattgtaatgttggatgaaatataaaacattgttgaaa 240  Q
    ||||| ||||||||||||||||| |||| |||||||||| |||||    
T  20334795 aaaataaaattgtaatgttggatcaaatttaaaacattgctgaaa 20334751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 30079453 - 30079501
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||||||||||||||||| || ||| |||| |||||||||| |||||||    
T  30079453 tgaaaatgaaattgtaatatttgataaaatttaaaacattgctgaaaat 30079501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 242
Target Start/End: Original strand, 32941937 - 32941997
Alignment:
Q  182 tatgttattgggtgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||||| || ||||||||||| | |||||||| | |||||||  |||||||||||||||||    
T  32941937 tatgttgtttggtgaaaatgagaatgtaatgtggaatgaaattaaaaacattgttgaaaat 32941997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 234
Target Start/End: Complemental strand, 48643001 - 48642961
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattg 234  Q
    |||||||||||||||||| || |||||||| ||||||||||    
T  48643001 tgaaaatgaaattgtaatatttgatgaaatttaaaacattg 48642961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 21685421 - 21685467
Alignment:
Q  196 aaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||    
T  21685421 aaaatgaaattgtaatgttagatgaaatataaaacattgttgaaaat 21685467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 18301583 - 18301474
Alignment:
Q  20 aacatatcaccccgataggccaaaccgtcccgcaccgctttgtagcgggttaggcggagcgggcaccctactaatagtgggtttaaaatctcaacccacc 119  Q
    |||||||||  || || |||||| ||||||||| || |||| ||||||||||||||||||||||| |||||   | ||||||| |||| |||||||||||    
T  18301583 aacatatcaatccaatgggccaacccgtcccgccccactttttagcgggttaggcggagcgggcatcctacatgtggtgggttgaaaaactcaacccacc 18301484  T
Q  120 ctgctaaaaa 129  Q
      ||||||||    
T  18301483 acgctaaaaa 18301474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 242
Target Start/End: Original strand, 26344909 - 26344965
Alignment:
Q  186 ttattgggtgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    ||||||| ||||||| |||||||||||||||||||||| |||||||||| |||||||    
T  26344909 ttattggatgaaaataaaattgtaatgttggatgaaatttaaaacattgctgaaaat 26344965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 35375381 - 35375333
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  35375381 tgaaaatgaaattgtaatgttggataaaatctaaaacattgttgaaaat 35375333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 40095275 - 40095328
Alignment:
Q  189 ttgggtgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||| ||||||| |||||||||||||| ||||||| ||||||||||||||||||    
T  40095275 ttggatgaaaataaaattgtaatgttgaatgaaatttaaaacattgttgaaaat 40095328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 25507097 - 25507045
Alignment:
Q  189 ttgggtgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaa 241  Q
    |||| ||||||| ||||||||||||||||| |||| |||||||||||||||||    
T  25507097 ttggatgaaaataaaattgtaatgttggataaaatttaaaacattgttgaaaa 25507045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 39167136 - 39167184
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    ||||||| |||||||||||||||||||||| ||||||||||| ||||||    
T  39167136 tgaaaataaaattgtaatgttggatgaaatttaaaacattgtggaaaat 39167184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 231
Target Start/End: Original strand, 32937931 - 32937973
Alignment:
Q  189 ttgggtgaaaatgaaattgtaatgttggatgaaatataaaaca 231  Q
    |||| ||||||||||||| ||||||||||||||||||||||||    
T  32937931 ttggatgaaaatgaaattttaatgttggatgaaatataaaaca 32937973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 6248294 - 6248246
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    ||||||| ||||||||||||||||| |||| |||||||||| |||||||    
T  6248294 tgaaaataaaattgtaatgttggattaaatttaaaacattgctgaaaat 6248246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 234
Target Start/End: Complemental strand, 12973782 - 12973742
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattg 234  Q
    ||||||| |||||||||||||||||||||| ||||||||||    
T  12973782 tgaaaataaaattgtaatgttggatgaaatttaaaacattg 12973742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 25532931 - 25532883
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    ||||||||||||| ||||||| |||||||| ||||||||||||| ||||    
T  25532931 tgaaaatgaaattttaatgtttgatgaaatttaaaacattgttggaaat 25532883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 233
Target Start/End: Complemental strand, 18310155 - 18310116
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacatt 233  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  18310155 tgaaattgaaattgtaatgctggatgaaatataaaacatt 18310116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 235
Target Start/End: Original strand, 29923152 - 29923207
Alignment:
Q  180 tctatgttattgggtgaaaatgaaattgtaatgttggatgaaatataaaacattgt 235  Q
    |||||||| || ||||||||| ||||||||||||||||| ||||  ||||||||||    
T  29923152 tctatgttgtttggtgaaaataaaattgtaatgttggattaaattcaaaacattgt 29923207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 241
Target Start/End: Original strand, 39158176 - 39158223
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaa 241  Q
    |||||||||||||||||||||| |||| || |||||||| ||||||||    
T  39158176 tgaaaatgaaattgtaatgttgaatgacatttaaaacatcgttgaaaa 39158223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 242
Target Start/End: Complemental strand, 51231977 - 51231930
Alignment:
Q  195 gaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||||| |||||||||||||||||||||| |||||| ||||| |||||    
T  51231977 gaaaataaaattgtaatgttggatgaaatttaaaacgttgttaaaaat 51231930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 231
Target Start/End: Complemental strand, 27350858 - 27350816
Alignment:
Q  189 ttgggtgaaaatgaaattgtaatgttggatgaaatataaaaca 231  Q
    |||| ||||||| |||||||||||||||||||||| |||||||    
T  27350858 ttggatgaaaataaaattgtaatgttggatgaaatttaaaaca 27350816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 32910235 - 32910281
Alignment:
Q  196 aaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||||||||||||||| ||  ||||||| ||||||||||||||||||    
T  32910235 aaaatgaaattgtaatatttaatgaaatttaaaacattgttgaaaat 32910281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 234
Target Start/End: Complemental strand, 3935670 - 3935633
Alignment:
Q  197 aaatgaaattgtaatgttggatgaaatataaaacattg 234  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  3935670 aaataaaattgtaatgttggatgaaatttaaaacattg 3935633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 238
Target Start/End: Complemental strand, 11537006 - 11536965
Alignment:
Q  197 aaatgaaattgtaatgttggatgaaatataaaacattgttga 238  Q
    ||||||||||||||||||  ||||||| ||||||||||||||    
T  11537006 aaatgaaattgtaatgttaaatgaaatttaaaacattgttga 11536965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 41751366 - 41751313
Alignment:
Q  189 ttgggtgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||| ||||||||||||||||||||  ||||||||  | |||||||||||||||    
T  41751366 ttggatgaaaatgaaattgtaatgtcagatgaaattcataacattgttgaaaat 41751313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 24644818 - 24644871
Alignment:
Q  189 ttgggtgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||| ||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  24644818 ttggatgaaaataaaattgtaatgttggatgaaatttaaaacattgttgaaaat 24644871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 16971607 - 16971660
Alignment:
Q  189 ttgggtgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||||||||||| |||||||| |||||||| |||| ||||||||||||||||||    
T  16971607 ttgggtgaaaataaaattgtattgttggataaaatttaaaacattgttgaaaat 16971660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 22414022 - 22413970
Alignment:
Q  189 ttgggtgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaa 241  Q
    |||| ||| |||||||||||||||||||||||||| |||||||||| ||||||    
T  22414022 ttggatgagaatgaaattgtaatgttggatgaaatttaaaacattgctgaaaa 22413970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 237
Target Start/End: Complemental strand, 8064717 - 8064673
Alignment:
Q  193 gtgaaaatgaaattgtaatgttggatgaaatataaaacattgttg 237  Q
    |||||||||||||| ||||||||||||||||  ||||||||||||    
T  8064717 gtgaaaatgaaattttaatgttggatgaaattaaaaacattgttg 8064673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 11417283 - 11417235
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    ||||||| |||| ||||||||||||||||| |||||||||| |||||||    
T  11417283 tgaaaataaaatcgtaatgttggatgaaatttaaaacattgctgaaaat 11417235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 13532144 - 13532192
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||||||||||||||||| || |||||||| |||||||||| |||||||    
T  13532144 tgaaaatgaaattgtaatatttgatgaaatttaaaacattgctgaaaat 13532192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 32519292 - 32519224
Alignment:
Q  62 tagcgggttaggcggagcgggcaccctactaatagtgggtttaaaatctcaacccaccctgctaaaaaa 130  Q
    |||||||||||||||| |   |||||||| |||  |||||| |||||||||||||||||| ||||||||    
T  32519292 tagcgggttaggcggaacaaacaccctacaaatgatgggttcaaaatctcaacccaccctactaaaaaa 32519224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 236
Target Start/End: Complemental strand, 4563087 - 4563044
Alignment:
Q  193 gtgaaaatgaaattgtaatgttggatgaaatataaaacattgtt 236  Q
    |||||||| ||||||||||||||||||||||  |||||||||||    
T  4563087 gtgaaaataaaattgtaatgttggatgaaattgaaaacattgtt 4563044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 182 - 241
Target Start/End: Original strand, 19134949 - 19135007
Alignment:
Q  182 tatgttattgggtgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaa 241  Q
    ||||||||| |||| ||||||||||||||||| | ||||| || ||||||||||||||||    
T  19134949 tatgttatttggtggaaatgaaattgtaatgtggaatgaatta-aaaacattgttgaaaa 19135007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 4577325 - 4577276
Alignment:
Q  186 ttattgggtgaaaatgaaattgtaatgttggatgaaatataaaacattgt 235  Q
    ||||| ||||||||| ||||||| ||||||||||||||  ||||||||||    
T  4577325 ttatttggtgaaaataaaattgtcatgttggatgaaattgaaaacattgt 4577276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 234
Target Start/End: Original strand, 7169954 - 7169991
Alignment:
Q  197 aaatgaaattgtaatgttggatgaaatataaaacattg 234  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  7169954 aaataaaattgtaatgttggatgaaatttaaaacattg 7169991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 30752779 - 30752738
Alignment:
Q  182 tatgttattgggtgaaaatgaaattgtaatgttggatgaaat 223  Q
    |||||| || ||||||||| ||||||||||||||||||||||    
T  30752779 tatgttttttggtgaaaataaaattgtaatgttggatgaaat 30752738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 20500774 - 20500726
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||||||||||||||||| || |||||||| | |||||||| |||||||    
T  20500774 tgaaaatgaaattgtaatatttgatgaaatttgaaacattgctgaaaat 20500726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 25466019 - 25465971
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  25466019 tgaaaatgaaattgtaatgtttgatgaaatttaaaacattgttgaaaat 25465971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 37045527 - 37045479
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  37045527 tgaaaatgaaattgtaatgtttgatgaaatttaaaacattgttgaaaat 37045479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 45915075 - 45915123
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  45915075 tgaaaataaaattgtaatgttggatgaaatttaaaacattgttgaaaat 45915123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 4280494 - 4280450
Alignment:
Q  198 aatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||||||||||||||||||||||||| |||||||||| |||||||    
T  4280494 aatgaaattgtaatgttggatgaaatttaaaacattgctgaaaat 4280450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 25858406 - 25858358
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||||||||||||||||||||||| ||||| | ||||||||||||||||    
T  25858406 tgaaaatgaaattgtaatgttggaagaaatttgaaacattgttgaaaat 25858358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 2566196 - 2566249
Alignment:
Q  189 ttgggtgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||| ||||||| ||||||||||||| |||||||| |||||||| |||||||||    
T  2566196 ttggatgaaaataaaattgtaatgttagatgaaatttaaaacatggttgaaaat 2566249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 242
Target Start/End: Original strand, 5640597 - 5640642
Alignment:
Q  197 aaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    ||||||||||||||| || |||||||| ||||||||||||||||||    
T  5640597 aaatgaaattgtaatatttgatgaaatttaaaacattgttgaaaat 5640642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 55467505 - 55467558
Alignment:
Q  189 ttgggtgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||| ||||||| ||||||| |||||||||||||| |||||||||| |||||||    
T  55467505 ttggatgaaaataaaattgttatgttggatgaaatttaaaacattgctgaaaat 55467558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 20038601 - 20038553
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    ||||||| ||||||||||||||||| |||| | ||||||||||||||||    
T  20038601 tgaaaataaaattgtaatgttggatcaaatttgaaacattgttgaaaat 20038553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 113
Target Start/End: Complemental strand, 23316300 - 23316249
Alignment:
Q  62 tagcgggttaggcggagcgggcaccctactaatagtgggtttaaaatctcaa 113  Q
    |||||||||||||||||||||||||||||| ||    |||||||||||||||    
T  23316300 tagcgggttaggcggagcgggcaccctacttatgtcaggtttaaaatctcaa 23316249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 91
Target Start/End: Original strand, 28262052 - 28262095
Alignment:
Q  48 cccgcaccgctttgtagcgggttaggcggagcgggcaccctact 91  Q
    ||||| ||||||| |||||||||||||||||||| |||||||||    
T  28262052 cccgccccgctttttagcgggttaggcggagcggacaccctact 28262095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Complemental strand, 35143171 - 35143125
Alignment:
Q  196 aaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    ||||||||||||||||||||||| ||||   ||||||||||||||||    
T  35143171 aaaatgaaattgtaatgttggattaaattgtaaacattgttgaaaat 35143125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 242
Target Start/End: Original strand, 5671872 - 5671917
Alignment:
Q  197 aaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    ||||||||||||||| || |||||||| ||||||| ||||||||||    
T  5671872 aaatgaaattgtaatatttgatgaaatttaaaacaatgttgaaaat 5671917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 242
Target Start/End: Original strand, 5681369 - 5681414
Alignment:
Q  197 aaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    ||||||||||||||| || |||||||| ||||||| ||||||||||    
T  5681369 aaatgaaattgtaatatttgatgaaatttaaaacaatgttgaaaat 5681414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 45629412 - 45629359
Alignment:
Q  189 ttgggtgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||| ||||||| |||||||||||||| ||||||| ||||| |||| |||||||    
T  45629412 ttggatgaaaataaaattgtaatgttgtatgaaatttaaaatattgctgaaaat 45629359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 241
Target Start/End: Complemental strand, 55129951 - 55129906
Alignment:
Q  196 aaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaa 241  Q
    ||||| ||||||||||||||||| || | |||||||||||||||||    
T  55129951 aaaataaaattgtaatgttggataaattttaaaacattgttgaaaa 55129906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 234
Target Start/End: Original strand, 8557818 - 8557858
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattg 234  Q
    |||||||||||||||||| || |||||||| ||||||||||    
T  8557818 tgaaaatgaaattgtaatatttgatgaaatttaaaacattg 8557858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 38681462 - 38681414
Alignment:
Q  180 tctatgttattgggtgaaaatgaaattgtaatgttggatgaaatataaa 228  Q
    |||||||| || |||||||||||||||| |||||| |||||||| ||||    
T  38681462 tctatgttgtttggtgaaaatgaaattgcaatgttagatgaaatttaaa 38681414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 50578867 - 50578915
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||||| ||||||||||| || |||||||| |||||||||| |||||||    
T  50578867 tgaaaacgaaattgtaatatttgatgaaatttaaaacattgctgaaaat 50578915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 186 - 241
Target Start/End: Complemental strand, 6718826 - 6718771
Alignment:
Q  186 ttattgggtgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaa 241  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||| |||||||||||    
T  6718826 ttatttggtgaaaataaaattgtaatgttggatgaaatttaaaatattgttgaaaa 6718771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 195 - 242
Target Start/End: Original strand, 28224730 - 28224777
Alignment:
Q  195 gaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||    
T  28224730 gaaaataaaattgtaatgttggatgaaatgtaaaacattgttgaaaat 28224777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 242
Target Start/End: Original strand, 7591411 - 7591473
Alignment:
Q  180 tctatgttattgggtgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    ||||| || |||||||||||||||||| || ||| ||||||||||||||||||||||| ||||    
T  7591411 tctattttgttgggtgaaaatgaaattttactgtcggatgaaatataaaacattgttggaaat 7591473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 241
Target Start/End: Original strand, 6894269 - 6894314
Alignment:
Q  196 aaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaa 241  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||    
T  6894269 aaaataaaattgtaatgttggatgaaatttaaaacattgttgaaaa 6894314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 180 - 241
Target Start/End: Original strand, 34111614 - 34111675
Alignment:
Q  180 tctatgttattgggtgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaa 241  Q
    |||||||| || |||||||||||||||| ||| ||||||||| ||||||| |||||||||||    
T  34111614 tctatgttgtttggtgaaaatgaaattgcaatattggatgaagtataaaatattgttgaaaa 34111675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 240
Target Start/End: Original strand, 34881185 - 34881236
Alignment:
Q  189 ttgggtgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaa 240  Q
    |||| ||||||| ||||| |||||||||||||||| ||||||||||||||||    
T  34881185 ttggatgaaaataaaattttaatgttggatgaaatttaaaacattgttgaaa 34881236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 243
Target Start/End: Complemental strand, 4414436 - 4414387
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaatg 243  Q
    |||||||||||||||||||||||||||||| || ||  ||||||||||||    
T  4414436 tgaaaatgaaattgtaatgttggatgaaatctataatgttgttgaaaatg 4414387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 41455092 - 41455039
Alignment:
Q  189 ttgggtgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||| ||||||| |||||| ||||||||||||||| |||||||||| |||||||    
T  41455092 ttggatgaaaataaaattgaaatgttggatgaaatttaaaacattgatgaaaat 41455039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 1681337 - 1681289
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    ||||||| ||||||||||||||||| |||| ||||| ||||||||||||    
T  1681337 tgaaaataaaattgtaatgttggatcaaatttaaaatattgttgaaaat 1681289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 237
Target Start/End: Complemental strand, 12264096 - 12264048
Alignment:
Q  189 ttgggtgaaaatgaaattgtaatgttggatgaaatataaaacattgttg 237  Q
    |||| |||||||||||||||||| ||||||||||| | |||||||||||    
T  12264096 ttggatgaaaatgaaattgtaattttggatgaaatttgaaacattgttg 12264048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 17131945 - 17131993
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    ||||||| |||| ||||||||||||||||| |||||||||| |||||||    
T  17131945 tgaaaataaaatcgtaatgttggatgaaatttaaaacattgctgaaaat 17131993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 18845758 - 18845702
Alignment:
Q  179 atctatgttattgggtgaaaatgaaattgtaatgttggatgaaatataaaacattgt 235  Q
    ||||||||| ||  |||||||||||||| ||||||||||||||||  ||||||||||    
T  18845758 atctatgttgtttagtgaaaatgaaattttaatgttggatgaaattaaaaacattgt 18845702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 20191797 - 20191840
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttg 237  Q
    ||||||||||||| ||||||| |||||||| |||||||||||||    
T  20191797 tgaaaatgaaattttaatgttcgatgaaatttaaaacattgttg 20191840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 241
Target Start/End: Original strand, 31075476 - 31075523
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaa 241  Q
    ||||||| |||||||||| ||||||||||| ||||||||||| |||||    
T  31075476 tgaaaataaaattgtaatattggatgaaatttaaaacattgtagaaaa 31075523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 34872407 - 34872364
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttg 237  Q
    ||||||||||||| |||||||| ||||||||| |||||||||||    
T  34872407 tgaaaatgaaattataatgttgaatgaaatatgaaacattgttg 34872364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 22747431 - 22747480
Alignment:
Q  193 gtgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||||||| ||||||||||||   ||||||| ||||||||||||||||||    
T  22747431 gtgaaaataaaattgtaatgtgatatgaaatttaaaacattgttgaaaat 22747480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 25495309 - 25495256
Alignment:
Q  189 ttgggtgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||| ||||||| ||||| ||||||| ||||| || ||||||||||||||||||    
T  25495309 ttggatgaaaataaaattataatgtttgatgatatttaaaacattgttgaaaat 25495256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 241
Target Start/End: Original strand, 32721334 - 32721379
Alignment:
Q  196 aaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaa 241  Q
    ||||| |||||||||| || |||||||| |||||||||||||||||    
T  32721334 aaaataaaattgtaatatttgatgaaatttaaaacattgttgaaaa 32721379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 11402812 - 11402764
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    |||||||||||||||||| || |||| ||| |||||||||| |||||||    
T  11402812 tgaaaatgaaattgtaatatttgatggaatttaaaacattgctgaaaat 11402764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 32244241 - 32244289
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    ||||||| |||| ||||||||||||||||| |||||||||  |||||||    
T  32244241 tgaaaataaaatcgtaatgttggatgaaatttaaaacattcctgaaaat 32244289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0891 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0891
Description:

Target: scaffold0891; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 129
Target Start/End: Complemental strand, 802 - 727
Alignment:
Q  54 ccgctttgtagcgggttaggcggagcgggcaccctactaatagtgggtttaaaatctcaacccaccctgctaaaaa 129  Q
    ||||||| ||||||||||||| ||| || |||||||||  |||  |||| ||||||||||||||||| ||||||||    
T  802 ccgctttttagcgggttaggcagagtggacaccctacttgtagcaggttcaaaatctcaacccaccccgctaaaaa 727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 62627 - 62579
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgttgaaaat 242  Q
    ||||||| |||| ||||||||||||||||| |||||||||| |||||||    
T  62627 tgaaaataaaatcgtaatgttggatgaaatttaaaacattgctgaaaat 62579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0688 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0688
Description:

Target: scaffold0688; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 1392 - 1350
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgtt 236  Q
    ||||||||||||| ||||||| |||||||| ||||||||||||    
T  1392 tgaaaatgaaattttaatgttcgatgaaatttaaaacattgtt 1350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0688; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 7961 - 7919
Alignment:
Q  194 tgaaaatgaaattgtaatgttggatgaaatataaaacattgtt 236  Q
    ||||||||||||| ||||||| |||||||| ||||||||||||    
T  7961 tgaaaatgaaattttaatgttcgatgaaatttaaaacattgtt 7919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 10722 - 10787
Alignment:
Q  49 ccgcaccgctttgtagcgggttaggcggagcgggcaccctactaatagtgggtttaaaatctcaac 114  Q
    |||| ||||||| ||| ||||||| ||||| || ||||||||| |||| ||||| |||||||||||    
T  10722 ccgccccgctttttagggggttagacggagtggacaccctacttatagcgggttcaaaatctcaac 10787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University