View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20775_low_74 (Length: 217)
Name: NF20775_low_74
Description: NF20775
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20775_low_74 |
 |  |
|
Alignment Details
Target: chr2 (Bit Score: 186; Significance: 1e-101; HSPs: 8)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 19 - 204
Target Start/End: Original strand, 43808552 - 43808737
Alignment:
| Q |
19 |
aagttaaactattttcatataagctgtttctataagctaataagctgaaaataacttatggacaatcgaacatgtcataagttattttcataagctctct |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43808552 |
aagttaaactattttcatataagctgtttctataagctaataagctgaaaataacttatggacaatcgaacatgtcataagttattttcataagctctct |
43808651 |
T |
 |
| Q |
119 |
caaatagtcttacaagtatttatgtcagtgaataaagtcaatctaaacatgttctcattataagttcactttaagtctcctttgct |
204 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43808652 |
caaatagtcttacaagtatttatgtcagtgaataaagtcaatctaaacatgttctcattataagttcactttaagtctcctttgct |
43808737 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 153
Target Start/End: Complemental strand, 43456714 - 43456649
Alignment:
| Q |
88 |
acatgtcataagttattttcataagctctctcaaatagtcttacaagtatttatgtcagtgaataa |
153 |
Q |
| |
|
||||||||| |||| |||||| ||||||| ||||| |||||||||||| ||||||| ||| ||||| |
|
|
| T |
43456714 |
acatgtcatgagttgttttcacaagctctttcaaacagtcttacaagtgtttatgtgagtaaataa |
43456649 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 147
Target Start/End: Original strand, 29430821 - 29430880
Alignment:
| Q |
88 |
acatgtcataagttattttcataagctctctcaaatagtcttacaagtatttatgtcagt |
147 |
Q |
| |
|
|||||||||||| |||||||||||| ||| ||||||||| |||||| ||||||||||| |
|
|
| T |
29430821 |
acatgtcataagctattttcataagttcttccaaatagtcccacaagtgtttatgtcagt |
29430880 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 133
Target Start/End: Original strand, 1625967 - 1626009
Alignment:
| Q |
91 |
tgtcataagttattttcataagctctctcaaatagtcttacaa |
133 |
Q |
| |
|
||||||||| || ||||||||| |||||||||||||||||||| |
|
|
| T |
1625967 |
tgtcataagctactttcataagttctctcaaatagtcttacaa |
1626009 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 33267610 - 33267572
Alignment:
| Q |
19 |
aagttaaactattttcatataagctgtttctataagcta |
57 |
Q |
| |
|
|||||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
33267610 |
aagttaaactgttttcatataagctgtttttataagcta |
33267572 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 18525247 - 18525210
Alignment:
| Q |
85 |
cgaacatgtcataagttattttcataagctctctcaaa |
122 |
Q |
| |
|
|||| |||||||||| |||||||||||||||||||||| |
|
|
| T |
18525247 |
cgaatatgtcataagctattttcataagctctctcaaa |
18525210 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 145
Target Start/End: Complemental strand, 44606117 - 44606060
Alignment:
| Q |
88 |
acatgtcataagttattttcataagctctctcaaatagtcttacaagtatttatgtca |
145 |
Q |
| |
|
|||||||||||||| |||||||||| ||| |||| |||| |||||||| |||||||| |
|
|
| T |
44606117 |
acatgtcataagttgttttcataagttcttccaaacagtcgtacaagtacttatgtca |
44606060 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 1742039 - 1741999
Alignment:
| Q |
88 |
acatgtcataagttattttcataagctctctcaaatagtct |
128 |
Q |
| |
|
|||||||||||||| ||| ||||||||||| |||||||||| |
|
|
| T |
1742039 |
acatgtcataagttgtttccataagctctcccaaatagtct |
1741999 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 8)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 88 - 146
Target Start/End: Original strand, 21130675 - 21130733
Alignment:
| Q |
88 |
acatgtcataagttattttcataagctctctcaaatagtcttacaagtatttatgtcag |
146 |
Q |
| |
|
|||||||| ||| ||||| |||||||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
21130675 |
acatgtcaaaagctatttccataagctctctcaaacagtctcacaagtatttatgtcag |
21130733 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 142
Target Start/End: Original strand, 9700064 - 9700118
Alignment:
| Q |
88 |
acatgtcataagttattttcataagctctctcaaatagtcttacaagtatttatg |
142 |
Q |
| |
|
||||||||||| || ||||| ||||||||||||||||||| |||||| |||||| |
|
|
| T |
9700064 |
acatgtcataaattgatttcacaagctctctcaaatagtctcacaagtgtttatg |
9700118 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 142
Target Start/End: Original strand, 14949929 - 14949983
Alignment:
| Q |
88 |
acatgtcataagttattttcataagctctctcaaatagtcttacaagtatttatg |
142 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||| ||||| |||| | |||||| |
|
|
| T |
14949929 |
acatgtcataagttattttcataagctctcctaaacagtctcacaaatgtttatg |
14949983 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 93 - 126
Target Start/End: Complemental strand, 27412884 - 27412851
Alignment:
| Q |
93 |
tcataagttattttcataagctctctcaaatagt |
126 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| |
|
|
| T |
27412884 |
tcataagttgttttcataagctctctcaaatagt |
27412851 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 86 - 135
Target Start/End: Complemental strand, 30191150 - 30191101
Alignment:
| Q |
86 |
gaacatgtcataagttattttcataagctctctcaaatagtcttacaagt |
135 |
Q |
| |
|
|||||||||||||||| ||| ||||||||||| |||| ||||| |||||| |
|
|
| T |
30191150 |
gaacatgtcataagttgtttccataagctctcccaaacagtctaacaagt |
30191101 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 159
Target Start/End: Original strand, 10923674 - 10923730
Alignment:
| Q |
103 |
ttttcataagctctctcaaatagtcttacaagtatttatgtcagtgaataaagtcaa |
159 |
Q |
| |
|
||||||||| ||||||||||| ||||||||||| |||||| || | |||||| |||| |
|
|
| T |
10923674 |
ttttcataaactctctcaaattgtcttacaagtgtttatgccactaaataaactcaa |
10923730 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 147
Target Start/End: Original strand, 11376765 - 11376825
Alignment:
| Q |
87 |
aacatgtcataagttattttcataagctctctcaaatagtcttacaagtatttatgtcagt |
147 |
Q |
| |
|
||||||||| ||| |||||||||||| |||| |||||||||| ||||| | |||| ||||| |
|
|
| T |
11376765 |
aacatgtcacaagctattttcataagttctcccaaatagtctcacaagaacttatatcagt |
11376825 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 31915297 - 31915245
Alignment:
| Q |
91 |
tgtcataagttattttcataagctctctcaaatagtcttacaagtatttatgt |
143 |
Q |
| |
|
||||||||||| ||| ||||||| ||||||| ||||| |||||||||||||| |
|
|
| T |
31915297 |
tgtcataagttgtttgtataagctttctcaaacagtctcacaagtatttatgt |
31915245 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 37; Significance: 0.000000000005; HSPs: 12)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 135
Target Start/End: Complemental strand, 2175857 - 2175809
Alignment:
| Q |
87 |
aacatgtcataagttattttcataagctctctcaaatagtcttacaagt |
135 |
Q |
| |
|
||||||||||||||| ||||||||| || |||||||||||||||||||| |
|
|
| T |
2175857 |
aacatgtcataagttgttttcataaactatctcaaatagtcttacaagt |
2175809 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 25182992 - 25182947
Alignment:
| Q |
90 |
atgtcataagttattttcataagctctctcaaatagtcttacaagt |
135 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| ||||| |||||| |
|
|
| T |
25182992 |
atgtcataagttgttttcataagctctctcaaacagtctcacaagt |
25182947 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 135
Target Start/End: Original strand, 1810040 - 1810087
Alignment:
| Q |
88 |
acatgtcataagttattttcataagctctctcaaatagtcttacaagt |
135 |
Q |
| |
|
|||||||||||||| ||| | |||||||||||||||||||| |||||| |
|
|
| T |
1810040 |
acatgtcataagttgtttccgtaagctctctcaaatagtctcacaagt |
1810087 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 128
Target Start/End: Complemental strand, 40880954 - 40880915
Alignment:
| Q |
89 |
catgtcataagttattttcataagctctctcaaatagtct |
128 |
Q |
| |
|
||||||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
40880954 |
catgtcataagttgttttcataagctctctcaaacagtct |
40880915 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 47584523 - 47584570
Alignment:
| Q |
98 |
agttattttcataagctctctcaaatagtcttacaagtatttatgtca |
145 |
Q |
| |
|
|||| |||||||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
47584523 |
agttcttttcataagctctctcaaatagtctcacaagtgcttatgtca |
47584570 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 142
Target Start/End: Original strand, 50015948 - 50016003
Alignment:
| Q |
87 |
aacatgtcataagttattttcataagctctctcaaatagtcttacaagtatttatg |
142 |
Q |
| |
|
||||||||||| ||| |||||||||| ||||||||| ||||| |||||| |||||| |
|
|
| T |
50015948 |
aacatgtcatacgttcttttcataagttctctcaaacagtctcacaagtgtttatg |
50016003 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 128
Target Start/End: Original strand, 21574551 - 21574593
Alignment:
| Q |
86 |
gaacatgtcataagttattttcataagctctctcaaatagtct |
128 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| |||| ||||| |
|
|
| T |
21574551 |
gaacatgtcataagttgttttcataagctctcccaaacagtct |
21574593 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 132
Target Start/End: Original strand, 47132063 - 47132101
Alignment:
| Q |
94 |
cataagttattttcataagctctctcaaatagtcttaca |
132 |
Q |
| |
|
|||||||| |||||||||| ||||||||||||||||||| |
|
|
| T |
47132063 |
cataagttgttttcataagttctctcaaatagtcttaca |
47132101 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 159
Target Start/End: Original strand, 50004713 - 50004787
Alignment:
| Q |
86 |
gaacatgtcataagttattttcataa-gctctctcaaatagtcttacaagtatttatgtcagtgaataaagtcaa |
159 |
Q |
| |
|
|||||||||||||||| ||| ||||| || |||||||| |||||||||| | |||||||||| |||||| |||| |
|
|
| T |
50004713 |
gaacatgtcataagttgtttccataaggccctctcaaacagtcttacaattgcttatgtcagtaaataaactcaa |
50004787 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 14548726 - 14548681
Alignment:
| Q |
90 |
atgtcataagttattttcataagctctctcaaatagtcttacaagt |
135 |
Q |
| |
|
|||||||| ||| |||||||||||||||||||| ||||| |||||| |
|
|
| T |
14548726 |
atgtcatacgttgttttcataagctctctcaaacagtctcacaagt |
14548681 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 142
Target Start/End: Complemental strand, 2304280 - 2304224
Alignment:
| Q |
86 |
gaacatgtcataagttattttcataagctctctcaaatagtcttacaagtatttatg |
142 |
Q |
| |
|
|||||||||||||||| |||||||| ||||||||||||| | |||||| |||||| |
|
|
| T |
2304280 |
gaacatgtcataagttgctttcataatttctctcaaatagtttcacaagtgtttatg |
2304224 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 135
Target Start/End: Original strand, 50211805 - 50211845
Alignment:
| Q |
95 |
ataagttattttcataagctctctcaaatagtcttacaagt |
135 |
Q |
| |
|
||||||| |||||||||| ||||||||| |||||||||||| |
|
|
| T |
50211805 |
ataagttgttttcataagttctctcaaacagtcttacaagt |
50211845 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 36; Significance: 0.00000000002; HSPs: 10)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 135
Target Start/End: Complemental strand, 1669805 - 1669758
Alignment:
| Q |
88 |
acatgtcataagttattttcataagctctctcaaatagtcttacaagt |
135 |
Q |
| |
|
|||||||||||||| ||||||||||||||| ||| ||||||||||||| |
|
|
| T |
1669805 |
acatgtcataagttgttttcataagctctcccaattagtcttacaagt |
1669758 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 133
Target Start/End: Complemental strand, 20368189 - 20368142
Alignment:
| Q |
86 |
gaacatgtcataagttattttcataagctctctcaaatagtcttacaa |
133 |
Q |
| |
|
|||||||||||||||| |||||||||| |||| ||||||||||||||| |
|
|
| T |
20368189 |
gaacatgtcataagttgttttcataagttctcccaaatagtcttacaa |
20368142 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 88 - 142
Target Start/End: Complemental strand, 2460158 - 2460104
Alignment:
| Q |
88 |
acatgtcataagttattttcataagctctctcaaatagtcttacaagtatttatg |
142 |
Q |
| |
|
|||||||||||||| ||| |||||||||||||||| ||||| ||||||| ||||| |
|
|
| T |
2460158 |
acatgtcataagttgtttccataagctctctcaaacagtctcacaagtacttatg |
2460104 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 142
Target Start/End: Complemental strand, 27693448 - 27693392
Alignment:
| Q |
86 |
gaacatgtcataagttattttcataagctctctcaaatagtcttacaagtatttatg |
142 |
Q |
| |
|
|||||||||||||||| ||| ||||| ||||||||||||||| ||||||| ||||| |
|
|
| T |
27693448 |
gaacatgtcataagttgtttccataaattctctcaaatagtctcacaagtacttatg |
27693392 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 147
Target Start/End: Complemental strand, 32577993 - 32577934
Alignment:
| Q |
88 |
acatgtcataagttattttcataagctctctcaaatagtcttacaagtatttatgtcagt |
147 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| | | | |||||||||||| |||| |
|
|
| T |
32577993 |
acatgtcataagttgttttcataagctctctcaaacaatgtcccaagtatttatgccagt |
32577934 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 142
Target Start/End: Original strand, 30863309 - 30863363
Alignment:
| Q |
88 |
acatgtcataagttattttcataagctctctcaaatagtcttacaagtatttatg |
142 |
Q |
| |
|
|||||||||||||| |||||||||||||| |||| ||||| |||||| |||||| |
|
|
| T |
30863309 |
acatgtcataagttgttttcataagctctaccaaagagtctaacaagtgtttatg |
30863363 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 143
Target Start/End: Original strand, 30865547 - 30865601
Alignment:
| Q |
89 |
catgtcataagttattttcataagctctctcaaatagtcttacaagtatttatgt |
143 |
Q |
| |
|
||||||||||||||||| |||||||||||| ||| |||| |||||| ||||||| |
|
|
| T |
30865547 |
catgtcataagttatttccataagctctcttaaactgtctaacaagtgtttatgt |
30865601 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 90 - 147
Target Start/End: Original strand, 27857423 - 27857480
Alignment:
| Q |
90 |
atgtcataagttattttcataagctctctcaaatagtcttacaagtatttatgtcagt |
147 |
Q |
| |
|
|||||||||||| ||||||||||||||| |||| ||| | |||||| | ||||||||| |
|
|
| T |
27857423 |
atgtcataagttgttttcataagctctcccaaacagtttcacaagtgtctatgtcagt |
27857480 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 141
Target Start/End: Original strand, 32917260 - 32917313
Alignment:
| Q |
88 |
acatgtcataagttattttcataagctctctcaaatagtcttacaagtatttat |
141 |
Q |
| |
|
|||||||||||||| ||| ||||||||||| |||| ||||| |||||| ||||| |
|
|
| T |
32917260 |
acatgtcataagttgtttccataagctctcccaaacagtctcacaagtgtttat |
32917313 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 31668430 - 31668474
Alignment:
| Q |
98 |
agttattttcataagctctctcaaatagtcttacaagtatttatg |
142 |
Q |
| |
|
|||| ||||||||||||||||| |||||||| |||||| |||||| |
|
|
| T |
31668430 |
agttgttttcataagctctctctaatagtctcacaagtgtttatg |
31668474 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 36; Significance: 0.00000000002; HSPs: 10)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 147
Target Start/End: Complemental strand, 4034020 - 4033965
Alignment:
| Q |
92 |
gtcataagttattttcataagctctctcaaatagtcttacaagtatttatgtcagt |
147 |
Q |
| |
|
||||||||||||||||||||||||||||||| | ||| |||||| |||||| |||| |
|
|
| T |
4034020 |
gtcataagttattttcataagctctctcaaacaatctcacaagtgtttatgccagt |
4033965 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 16980868 - 16980921
Alignment:
| Q |
90 |
atgtcataagttattttcataagctctctcaaatagtcttacaagtatttatgt |
143 |
Q |
| |
|
||||| |||||| ||| |||||||||||||||||||||| ||||||| |||||| |
|
|
| T |
16980868 |
atgtcgtaagttgtttccataagctctctcaaatagtctcacaagtacttatgt |
16980921 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 135
Target Start/End: Complemental strand, 49692059 - 49692012
Alignment:
| Q |
88 |
acatgtcataagttattttcataagctctctcaaatagtcttacaagt |
135 |
Q |
| |
|
|||||||||||| |||||||||||| ||||||||| ||||| |||||| |
|
|
| T |
49692059 |
acatgtcataagctattttcataagttctctcaaacagtctcacaagt |
49692012 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 145
Target Start/End: Original strand, 4757400 - 4757458
Alignment:
| Q |
87 |
aacatgtcataagttattttcataagctctctcaaatagtcttacaagtatttatgtca |
145 |
Q |
| |
|
||||||||||||||| |||||||||| ||| ||||| |||| |||||| ||||||||| |
|
|
| T |
4757400 |
aacatgtcataagttgttttcataagttctgccaaatggtctcacaagtgtttatgtca |
4757458 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 133
Target Start/End: Original strand, 6557039 - 6557081
Alignment:
| Q |
91 |
tgtcataagttattttcataagctctctcaaatagtcttacaa |
133 |
Q |
| |
|
||||||||| |||||||||||| ||||||||||||||| |||| |
|
|
| T |
6557039 |
tgtcataagctattttcataagttctctcaaatagtctcacaa |
6557081 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 145
Target Start/End: Complemental strand, 38867838 - 38867783
Alignment:
| Q |
88 |
acatgtcataagttattttcataagctctctcaaatagtcttacaagtatttatgtca |
145 |
Q |
| |
|
|||| ||||||||||||| |||||||||||||||| |||| |||||| ||||||||| |
|
|
| T |
38867838 |
acatatcataagttatttccataagctctctcaaacagtc--acaagtgtttatgtca |
38867783 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 125
Target Start/End: Original strand, 6262801 - 6262838
Alignment:
| Q |
88 |
acatgtcataagttattttcataagctctctcaaatag |
125 |
Q |
| |
|
|||| ||||||||||||||||||||||||| ||||||| |
|
|
| T |
6262801 |
acatatcataagttattttcataagctctcccaaatag |
6262838 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 104 - 141
Target Start/End: Original strand, 7707269 - 7707306
Alignment:
| Q |
104 |
tttcataagctctctcaaatagtcttacaagtatttat |
141 |
Q |
| |
|
|||||||| |||||||||||| |||||||||||||||| |
|
|
| T |
7707269 |
tttcataaactctctcaaataatcttacaagtatttat |
7707306 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 28467495 - 28467536
Alignment:
| Q |
87 |
aacatgtcataagttattttcataagctctctcaaatagtct |
128 |
Q |
| |
|
||||||||||||||||||| ||||| ||||| |||||||||| |
|
|
| T |
28467495 |
aacatgtcataagttatttccataatctctcccaaatagtct |
28467536 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 145
Target Start/End: Original strand, 34536221 - 34536278
Alignment:
| Q |
88 |
acatgtcataagttattttcataagctctctcaaatagtcttacaagtatttatgtca |
145 |
Q |
| |
|
|||||||||||| | ||||||||||| ||||||| ||||| |||||| ||||||||| |
|
|
| T |
34536221 |
acatgtcataagctgttttcataagccatctcaaacagtctcacaagtgtttatgtca |
34536278 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 35; Significance: 0.00000000008; HSPs: 8)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 88 - 147
Target Start/End: Complemental strand, 3500974 - 3500913
Alignment:
| Q |
88 |
acatgtcataagttattttcataagctctctcaaatagtctta--caagtatttatgtcagt |
147 |
Q |
| |
|
|||||||||||||||||| ||||||||||| ||||||| |||| ||||| ||||||||||| |
|
|
| T |
3500974 |
acatgtcataagttatttccataagctctcacaaatagacttacgcaagtttttatgtcagt |
3500913 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 153
Target Start/End: Complemental strand, 22387904 - 22387838
Alignment:
| Q |
87 |
aacatgtcataagttattttcataagctctctcaaatagtcttacaagtatttatgtcagtgaataa |
153 |
Q |
| |
|
|||||| |||||||| ||||||||||||||| |||| ||||| ||| || ||||||||||| ||||| |
|
|
| T |
22387904 |
aacatgccataagttgttttcataagctctcccaaacagtctcacacgtgtttatgtcagtaaataa |
22387838 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 90 - 124
Target Start/End: Original strand, 31149705 - 31149739
Alignment:
| Q |
90 |
atgtcataagttattttcataagctctctcaaata |
124 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
31149705 |
atgtcataagttattttcataagctctctcaaata |
31149739 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 90 - 124
Target Start/End: Original strand, 31167997 - 31168031
Alignment:
| Q |
90 |
atgtcataagttattttcataagctctctcaaata |
124 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
31167997 |
atgtcataagttattttcataagctctctcaaata |
31168031 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 147
Target Start/End: Complemental strand, 44151468 - 44151424
Alignment:
| Q |
103 |
ttttcataagctctctcaaatagtcttacaagtatttatgtcagt |
147 |
Q |
| |
|
|||||||||||||||||||||| ||| ||||||| |||||||||| |
|
|
| T |
44151468 |
ttttcataagctctctcaaataatctcacaagtacttatgtcagt |
44151424 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 44808221 - 44808266
Alignment:
| Q |
88 |
acatgtcataagttattttcataagctctctcaaatagtcttacaa |
133 |
Q |
| |
|
||||||||||||||||||||||||| ||| ||||| ||||| |||| |
|
|
| T |
44808221 |
acatgtcataagttattttcataaggtctatcaaacagtctgacaa |
44808266 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 135
Target Start/End: Original strand, 8094368 - 8094416
Alignment:
| Q |
87 |
aacatgtcataagttattttcataagctctctcaaatagtcttacaagt |
135 |
Q |
| |
|
||||||||||||| | ||||||||| ||||||||||||||| |||||| |
|
|
| T |
8094368 |
aacatgtcataagctgttttcataaaatctctcaaatagtctcacaagt |
8094416 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 142
Target Start/End: Original strand, 36537969 - 36538025
Alignment:
| Q |
86 |
gaacatgtcataagttattttcataagctctctcaaatagtcttacaagtatttatg |
142 |
Q |
| |
|
|||||||||||||||| ||| |||||| ||||||||| | ||| |||||| |||||| |
|
|
| T |
36537969 |
gaacatgtcataagttgtttccataagttctctcaaacaatctcacaagtgtttatg |
36538025 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 35; Significance: 0.00000000008; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 147
Target Start/End: Complemental strand, 18628555 - 18628501
Alignment:
| Q |
93 |
tcataagttattttcataagctctctcaaatagtcttacaagtatttatgtcagt |
147 |
Q |
| |
|
||||||||| ||||||||||||||| |||| ||||| |||||| ||||||||||| |
|
|
| T |
18628555 |
tcataagttgttttcataagctctcccaaacagtctcacaagtgtttatgtcagt |
18628501 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 88 - 142
Target Start/End: Complemental strand, 27123359 - 27123305
Alignment:
| Q |
88 |
acatgtcataagttattttcataagctctctcaaatagtcttacaagtatttatg |
142 |
Q |
| |
|
|||||||||||||| ||| |||||||||||||||| ||||| ||||||| ||||| |
|
|
| T |
27123359 |
acatgtcataagttgtttccataagctctctcaaacagtctcacaagtacttatg |
27123305 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 145
Target Start/End: Original strand, 2996636 - 2996693
Alignment:
| Q |
88 |
acatgtcataagttattttcataagctctctcaaatagtcttacaagtatttatgtca |
145 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| ||||| | |||| |||||||| |
|
|
| T |
2996636 |
acatgtcataagttgttttcataagctctctcaaacagtctcaaaagtgcttatgtca |
2996693 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 127
Target Start/End: Original strand, 27725277 - 27725316
Alignment:
| Q |
88 |
acatgtcataagttattttcataagctctctcaaatagtc |
127 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| |||| |
|
|
| T |
27725277 |
acatgtcataagttatttccataagctctctcaaacagtc |
27725316 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 145
Target Start/End: Complemental strand, 33534174 - 33534119
Alignment:
| Q |
90 |
atgtcataagttattttcataagctctctcaaatagtcttacaagtatttatgtca |
145 |
Q |
| |
|
|||||| || || |||||||||||||||||||||| ||| ||||||| |||||||| |
|
|
| T |
33534174 |
atgtcacaatttgttttcataagctctctcaaatactctcacaagtacttatgtca |
33534119 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 86 - 135
Target Start/End: Complemental strand, 1555017 - 1554968
Alignment:
| Q |
86 |
gaacatgtcataagttattttcataagctctctcaaatagtcttacaagt |
135 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||||||| |||||| ||||| |
|
|
| T |
1555017 |
gaacatgtcataagctattttcataaattctctcaaacagtcttgcaagt |
1554968 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 93 - 126
Target Start/End: Original strand, 52428733 - 52428766
Alignment:
| Q |
93 |
tcataagttattttcataagctctctcaaatagt |
126 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| |
|
|
| T |
52428733 |
tcataagttgttttcataagctctctcaaatagt |
52428766 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 56007734 - 56007789
Alignment:
| Q |
79 |
gacaatcgaacatgtcataagttattttcataagctctctcaaatagtcttacaagt |
135 |
Q |
| |
|
||||||||| |||||||||||||| || || |||||||||||| |||||||||||| |
|
|
| T |
56007734 |
gacaatcga-catgtcataagttacttgtattagctctctcaaacagtcttacaagt |
56007789 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 32; Significance: 0.000000005; HSPs: 13)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 153
Target Start/End: Complemental strand, 7550511 - 7550460
Alignment:
| Q |
102 |
attttcataagctctctcaaatagtcttacaagtatttatgtcagtgaataa |
153 |
Q |
| |
|
|||| |||||||||||||||| ||||| ||||||| ||||||||||| |||| |
|
|
| T |
7550511 |
atttccataagctctctcaaagagtctcacaagtaattatgtcagtggataa |
7550460 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 128
Target Start/End: Original strand, 8090004 - 8090039
Alignment:
| Q |
93 |
tcataagttattttcataagctctctcaaatagtct |
128 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||| |
|
|
| T |
8090004 |
tcataagttgttttcataagctctctcaaatagtct |
8090039 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 142
Target Start/End: Complemental strand, 11297203 - 11297149
Alignment:
| Q |
88 |
acatgtcataagttattttcataagctctctcaaatagtcttacaagtatttatg |
142 |
Q |
| |
|
||||||| |||||| ||| |||||||||| ||||| |||||||||||| |||||| |
|
|
| T |
11297203 |
acatgtcttaagttgtttccataagctctttcaaacagtcttacaagtgtttatg |
11297149 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 12407730 - 12407680
Alignment:
| Q |
95 |
ataagttattttcataagctctctcaaatagtcttacaagtatttatgtca |
145 |
Q |
| |
|
|||||| ||||||||||||||||||||| |||| |||||| ||||||||| |
|
|
| T |
12407730 |
ataagtcattttcataagctctctcaaaccgtctcacaagtgtttatgtca |
12407680 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 32197703 - 32197741
Alignment:
| Q |
19 |
aagttaaactattttcatataagctgtttctataagcta |
57 |
Q |
| |
|
|||| ||||||||||||||||||||||||| |||||||| |
|
|
| T |
32197703 |
aagtcaaactattttcatataagctgtttccataagcta |
32197741 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 136
Target Start/End: Complemental strand, 37611224 - 37611174
Alignment:
| Q |
86 |
gaacatgtcataagttattttcataagctctctcaaatagtcttacaagta |
136 |
Q |
| |
|
|||||||||| ||||| |||||||||||||||||||| | ||| ||||||| |
|
|
| T |
37611224 |
gaacatgtcacaagttgttttcataagctctctcaaacaatctcacaagta |
37611174 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 136
Target Start/End: Complemental strand, 37787954 - 37787904
Alignment:
| Q |
86 |
gaacatgtcataagttattttcataagctctctcaaatagtcttacaagta |
136 |
Q |
| |
|
|||||||||| ||||| |||||||||||||||||||| | ||| ||||||| |
|
|
| T |
37787954 |
gaacatgtcacaagttgttttcataagctctctcaaacaatctcacaagta |
37787904 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 86 - 159
Target Start/End: Original strand, 40534260 - 40534333
Alignment:
| Q |
86 |
gaacatgtcataagttattttcataagctctctcaaatagtcttacaagtatttatgtcagtgaataaagtcaa |
159 |
Q |
| |
|
|||||||||||||| || || ||||||||||| ||| ||| | |||||| ||||||||||| |||||| |||| |
|
|
| T |
40534260 |
gaacatgtcataagctacttccataagctctcctaaacagtatcacaagtgtttatgtcagtaaataaactcaa |
40534333 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 4619768 - 4619828
Alignment:
| Q |
86 |
gaacatgtcataagttattttcataagctctctcaaatagtcttacaagtatttatgtcag |
146 |
Q |
| |
|
||||||||||| |||| ||||||||||||||| |||| ||| || ||||| ||||||||| |
|
|
| T |
4619768 |
gaacatgtcattagttgttttcataagctctcccaaacagtgttgcaagtgcttatgtcag |
4619828 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 10152397 - 10152437
Alignment:
| Q |
88 |
acatgtcataagttattttcataagctctctcaaatagtct |
128 |
Q |
| |
|
|||||||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
10152397 |
acatgtcataagttgttttcataagctctccaaaatagtct |
10152437 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 118
Target Start/End: Original strand, 11406255 - 11406287
Alignment:
| Q |
86 |
gaacatgtcataagttattttcataagctctct |
118 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| |
|
|
| T |
11406255 |
gaacatatcataagttattttcataagctctct |
11406287 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 12242716 - 12242672
Alignment:
| Q |
89 |
catgtcataagttattttcataagctctctcaaatagtcttacaa |
133 |
Q |
| |
|
||||||||||||| ||| |||||||||||||||||| ||| |||| |
|
|
| T |
12242716 |
catgtcataagttttttccataagctctctcaaataatctcacaa |
12242672 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 14980572 - 14980612
Alignment:
| Q |
88 |
acatgtcataagttattttcataagctctctcaaatagtct |
128 |
Q |
| |
|
||||||||||||| ||||| ||||||||||||||| ||||| |
|
|
| T |
14980572 |
acatgtcataagtcatttttataagctctctcaaacagtct |
14980612 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University