View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20777_low_1 (Length: 842)

Name: NF20777_low_1
Description: NF20777
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20777_low_1
NF20777_low_1
[»] chr6 (15 HSPs)
chr6 (554-824)||(30748007-30748268)
chr6 (554-668)||(31219161-31219275)
chr6 (554-653)||(31218963-31219062)
chr6 (407-519)||(1947417-1947528)
chr6 (407-518)||(16441775-16441885)
chr6 (554-668)||(23507957-23508070)
chr6 (764-824)||(30748280-30748340)
chr6 (438-501)||(19646027-19646090)
chr6 (705-789)||(29856904-29856988)
chr6 (566-660)||(12676479-12676573)
chr6 (707-781)||(19600133-19600206)
chr6 (579-639)||(6468811-6468871)
chr6 (438-501)||(5138503-5138565)
chr6 (407-501)||(27127493-27127586)
chr6 (704-789)||(29845638-29845723)
[»] chr5 (53 HSPs)
chr5 (554-796)||(21069297-21069538)
chr5 (567-824)||(19182971-19183218)
chr5 (584-824)||(19186075-19186305)
chr5 (676-824)||(13651006-13651159)
chr5 (556-788)||(9537033-9537264)
chr5 (554-693)||(4592869-4593008)
chr5 (554-668)||(8074459-8074573)
chr5 (554-775)||(9537943-9538164)
chr5 (566-693)||(25590451-25590577)
chr5 (554-656)||(28591127-28591229)
chr5 (554-824)||(31946898-31947152)
chr5 (554-668)||(546037-546150)
chr5 (554-693)||(2464677-2464816)
chr5 (554-668)||(16611736-16611850)
chr5 (554-693)||(14891123-14891258)
chr5 (554-668)||(2466775-2466889)
chr5 (554-640)||(18400198-18400284)
chr5 (4-92)||(13649348-13649435)
chr5 (567-691)||(8075811-8075935)
chr5 (554-653)||(40612675-40612774)
chr5 (578-693)||(32641702-32641817)
chr5 (573-691)||(32640315-32640433)
chr5 (556-660)||(18004648-18004752)
chr5 (565-660)||(544668-544762)
chr5 (554-616)||(13651173-13651234)
chr5 (554-659)||(16979000-16979105)
chr5 (592-651)||(4594118-4594176)
chr5 (554-659)||(13483029-13483133)
chr5 (764-817)||(19183229-19183282)
chr5 (701-782)||(32555434-32555514)
chr5 (717-788)||(2464820-2464891)
chr5 (609-655)||(14881010-14881056)
chr5 (586-693)||(28589739-28589846)
chr5 (554-651)||(13483174-13483275)
chr5 (764-824)||(19186003-19186063)
chr5 (717-773)||(28591029-28591085)
chr5 (442-509)||(28782706-28782773)
chr5 (717-787)||(8074601-8074671)
chr5 (717-787)||(8075735-8075805)
chr5 (717-787)||(25590581-25590651)
chr5 (717-787)||(40611411-40611481)
chr5 (731-787)||(4593025-4593081)
chr5 (438-494)||(10317259-10317315)
chr5 (764-824)||(31946826-31946886)
chr5 (723-787)||(32640445-32640509)
chr5 (717-787)||(14889920-14889990)
chr5 (717-787)||(14891049-14891119)
chr5 (717-787)||(40612561-40612631)
chr5 (791-824)||(544966-544999)
chr5 (791-824)||(4593174-4593207)
chr5 (707-788)||(18004799-18004880)
chr5 (554-591)||(24900410-24900447)
chr5 (791-824)||(40612429-40612462)
[»] chr7 (66 HSPs)
chr7 (554-668)||(48646057-48646171)
chr7 (556-693)||(10899049-10899186)
chr7 (554-693)||(35727707-35727845)
chr7 (554-650)||(44333147-44333243)
chr7 (554-690)||(7258283-7258419)
chr7 (554-668)||(48788673-48788787)
chr7 (554-787)||(46286511-46286744)
chr7 (554-655)||(43457465-43457566)
chr7 (566-781)||(8048672-8048887)
chr7 (558-668)||(8374926-8375036)
chr7 (554-668)||(30925009-30925123)
chr7 (411-518)||(48705644-48705750)
chr7 (554-668)||(48647444-48647558)
chr7 (554-656)||(48777264-48777366)
chr7 (575-691)||(13578299-13578414)
chr7 (554-695)||(44334424-44334564)
chr7 (578-693)||(7259660-7259775)
chr7 (554-656)||(8375596-8375698)
chr7 (554-693)||(35729062-35729201)
chr7 (562-693)||(42477397-42477527)
chr7 (554-788)||(12223580-12223814)
chr7 (554-654)||(45583692-45583792)
chr7 (586-668)||(44529068-44529150)
chr7 (594-656)||(44530624-44530686)
chr7 (573-691)||(12220050-12220167)
chr7 (424-509)||(33474361-33474445)
chr7 (599-693)||(45584472-45584566)
chr7 (554-656)||(39708111-39708213)
chr7 (554-695)||(5930107-5930247)
chr7 (554-646)||(21062825-21062917)
chr7 (701-773)||(24287635-24287707)
chr7 (556-668)||(33607624-33607736)
chr7 (554-646)||(34704917-34705009)
chr7 (581-781)||(24288754-24288954)
chr7 (602-762)||(25621628-25621788)
chr7 (574-756)||(27067811-27067992)
chr7 (574-756)||(27210321-27210502)
chr7 (581-645)||(10894385-10894449)
chr7 (554-691)||(19433912-19434049)
chr7 (604-781)||(32793229-32793406)
chr7 (607-667)||(43461730-43461789)
chr7 (717-787)||(7258426-7258496)
chr7 (704-774)||(39824287-39824357)
chr7 (566-658)||(24844593-24844685)
chr7 (562-668)||(8879544-8879651)
chr7 (575-788)||(7509353-7509565)
chr7 (578-656)||(34888936-34889014)
chr7 (717-787)||(44333288-44333358)
chr7 (717-787)||(48788574-48788644)
chr7 (791-824)||(48646368-48646401)
chr7 (717-773)||(42477531-42477587)
chr7 (606-766)||(22621187-22621347)
chr7 (717-772)||(43457619-43457674)
chr7 (718-788)||(384991-385061)
chr7 (701-788)||(8870132-8870221)
chr7 (717-787)||(10898975-10899045)
chr7 (543-618)||(24934799-24934876)
chr7 (790-824)||(45584267-45584301)
chr7 (717-787)||(48647345-48647415)
chr7 (723-788)||(8375504-8375569)
chr7 (791-824)||(10898844-10898877)
chr7 (734-787)||(24934965-24935018)
chr7 (635-668)||(33060899-33060932)
chr7 (791-824)||(42477699-42477732)
chr7 (791-824)||(45583906-45583939)
chr7 (791-824)||(48788446-48788479)
[»] chr2 (60 HSPs)
chr2 (554-787)||(21733653-21733889)
chr2 (554-692)||(31091504-31091642)
chr2 (554-793)||(34037549-34037788)
chr2 (554-656)||(32766252-32766354)
chr2 (554-693)||(2910108-2910247)
chr2 (567-770)||(17466727-17466930)
chr2 (554-667)||(40000336-40000449)
chr2 (557-656)||(17330243-17330342)
chr2 (554-656)||(24459459-24459561)
chr2 (558-668)||(31090176-31090286)
chr2 (554-692)||(39015013-39015151)
chr2 (554-668)||(24458068-24458182)
chr2 (554-668)||(32764946-32765060)
chr2 (554-788)||(34582551-34582785)
chr2 (588-668)||(14704048-14704128)
chr2 (543-793)||(14887374-14887626)
chr2 (554-668)||(39016384-39016496)
chr2 (582-667)||(7073675-7073760)
chr2 (554-649)||(5915012-5915107)
chr2 (438-509)||(7888572-7888643)
chr2 (576-770)||(7412122-7412316)
chr2 (555-656)||(38985002-38985103)
chr2 (425-501)||(10824259-10824334)
chr2 (554-782)||(38853763-38853991)
chr2 (635-781)||(26585167-26585310)
chr2 (540-755)||(12746115-12746332)
chr2 (407-499)||(803889-803980)
chr2 (598-690)||(17466093-17466185)
chr2 (573-655)||(2911505-2911587)
chr2 (577-720)||(15441920-15442063)
chr2 (717-793)||(24458211-24458287)
chr2 (597-668)||(26586296-26586367)
chr2 (597-656)||(31814357-31814416)
chr2 (565-655)||(21732131-21732216)
chr2 (566-654)||(5914324-5914412)
chr2 (701-773)||(18676719-18676791)
chr2 (725-773)||(21732274-21732322)
chr2 (717-788)||(17330120-17330191)
chr2 (717-788)||(32765088-32765159)
chr2 (717-788)||(43380738-43380809)
chr2 (463-509)||(445602-445648)
chr2 (554-656)||(8420021-8420123)
chr2 (578-656)||(33161799-33161877)
chr2 (633-788)||(37607189-37607344)
chr2 (701-782)||(38854944-38855025)
chr2 (425-509)||(6975837-6975919)
chr2 (732-788)||(31442517-31442573)
chr2 (554-665)||(33163462-33163574)
chr2 (717-788)||(14704156-14704227)
chr2 (726-773)||(31090317-31090364)
chr2 (718-789)||(31443125-31443196)
chr2 (717-787)||(24459356-24459426)
chr2 (460-506)||(33726405-33726451)
chr2 (717-787)||(39015156-39015226)
chr2 (717-787)||(39016285-39016355)
chr2 (461-506)||(2239607-2239652)
chr2 (791-824)||(2910420-2910453)
chr2 (791-824)||(2911258-2911291)
chr2 (575-656)||(11985720-11985801)
chr2 (791-824)||(32765257-32765290)
[»] chr3 (59 HSPs)
chr3 (554-754)||(3671047-3671246)
chr3 (554-668)||(17700526-17700640)
chr3 (554-656)||(48572993-48573095)
chr3 (554-668)||(17701920-17702034)
chr3 (554-668)||(36278960-36279074)
chr3 (554-668)||(52318318-52318432)
chr3 (578-667)||(11773053-11773142)
chr3 (554-691)||(55388081-55388218)
chr3 (554-710)||(50753825-50753981)
chr3 (554-656)||(2591635-2591737)
chr3 (554-656)||(45600952-45601053)
chr3 (554-668)||(47118052-47118166)
chr3 (578-788)||(36827356-36827566)
chr3 (555-788)||(20464078-20464311)
chr3 (585-693)||(36280293-36280401)
chr3 (554-656)||(2592020-2592122)
chr3 (554-668)||(19114541-19114655)
chr3 (407-519)||(21814202-21814312)
chr3 (554-653)||(34263813-34263912)
chr3 (554-656)||(33428448-33428550)
chr3 (582-693)||(53959076-53959187)
chr3 (407-507)||(15502622-15502721)
chr3 (554-668)||(47075352-47075466)
chr3 (554-656)||(55389482-55389584)
chr3 (554-692)||(52316987-52317125)
chr3 (407-506)||(41998907-41999005)
chr3 (425-503)||(1165784-1165861)
chr3 (594-656)||(48574472-48574534)
chr3 (583-667)||(49261539-49261620)
chr3 (677-774)||(3694035-3694132)
chr3 (560-656)||(48808380-48808476)
chr3 (425-507)||(15005830-15005911)
chr3 (554-656)||(19115160-19115261)
chr3 (422-519)||(3084012-3084107)
chr3 (407-506)||(34060751-34060850)
chr3 (555-621)||(19331117-19331183)
chr3 (554-641)||(53957683-53957769)
chr3 (571-645)||(47427885-47427959)
chr3 (717-787)||(55389371-55389441)
chr3 (558-782)||(40205893-40206118)
chr3 (554-657)||(47428575-47428672)
chr3 (718-788)||(55388211-55388281)
chr3 (717-789)||(2591776-2591848)
chr3 (717-773)||(17700670-17700726)
chr3 (717-773)||(36279103-36279159)
chr3 (425-507)||(21195283-21195364)
chr3 (585-655)||(33427791-33427860)
chr3 (717-787)||(48808523-48808593)
chr3 (723-788)||(19114670-19114735)
chr3 (583-668)||(39497244-39497329)
chr3 (437-504)||(54143822-54143889)
chr3 (448-502)||(22455369-22455423)
chr3 (717-787)||(48573136-48573206)
chr3 (626-656)||(48809667-48809697)
chr3 (791-824)||(17700838-17700871)
chr3 (791-824)||(17701698-17701731)
chr3 (460-509)||(28954253-28954302)
chr3 (791-824)||(36279264-36279297)
chr3 (791-824)||(48573307-48573340)
[»] chr8 (50 HSPs)
chr8 (573-824)||(41754651-41754891)
chr8 (554-693)||(32898421-32898560)
chr8 (602-787)||(45476218-45476403)
chr8 (558-693)||(35177407-35177542)
chr8 (554-668)||(35178805-35178919)
chr8 (616-787)||(45476445-45476616)
chr8 (556-772)||(31074004-31074220)
chr8 (705-824)||(41754127-41754246)
chr8 (554-693)||(1952946-1953084)
chr8 (575-668)||(5965443-5965536)
chr8 (554-788)||(5737904-5738138)
chr8 (557-781)||(33314872-33315093)
chr8 (425-518)||(43819551-43819643)
chr8 (427-545)||(7207194-7207310)
chr8 (407-509)||(24066973-24067074)
chr8 (554-768)||(30134574-30134788)
chr8 (554-645)||(41754006-41754097)
chr8 (598-788)||(28524810-28525000)
chr8 (554-691)||(10407562-10407699)
chr8 (407-501)||(617525-617617)
chr8 (407-501)||(623918-624010)
chr8 (585-775)||(28619028-28619219)
chr8 (407-509)||(42542994-42543095)
chr8 (594-660)||(28619554-28619620)
chr8 (573-649)||(1951970-1952045)
chr8 (578-780)||(24198966-24199164)
chr8 (407-494)||(589913-589998)
chr8 (583-691)||(5736879-5736987)
chr8 (594-782)||(12637648-12637833)
chr8 (764-814)||(41754589-41754639)
chr8 (566-788)||(31075172-31075392)
chr8 (701-781)||(9626349-9626429)
chr8 (562-618)||(28005359-28005415)
chr8 (562-618)||(28062662-28062718)
chr8 (717-793)||(32898341-32898417)
chr8 (609-693)||(10406269-10406353)
chr8 (701-764)||(39138569-39138632)
chr8 (717-787)||(1952872-1952942)
chr8 (471-517)||(12221022-12221068)
chr8 (597-651)||(41121160-41121214)
chr8 (544-618)||(59548-59624)
chr8 (407-507)||(27737704-27737803)
chr8 (701-773)||(28006492-28006564)
chr8 (701-773)||(28063795-28063867)
chr8 (468-507)||(8210174-8210213)
chr8 (460-506)||(4308834-4308880)
chr8 (709-787)||(36032869-36032947)
chr8 (575-668)||(8569437-8569530)
chr8 (736-793)||(9625380-9625437)
chr8 (791-824)||(10406510-10406543)
[»] chr1 (46 HSPs)
chr1 (562-695)||(7945528-7945661)
chr1 (554-693)||(32665746-32665885)
chr1 (558-668)||(5782426-5782536)
chr1 (557-693)||(9339657-9339793)
chr1 (573-693)||(10333162-10333282)
chr1 (554-769)||(8975167-8975382)
chr1 (554-788)||(6612427-6612652)
chr1 (585-668)||(9341026-9341109)
chr1 (566-657)||(52440571-52440662)
chr1 (554-656)||(10332994-10333096)
chr1 (554-668)||(22856688-22856802)
chr1 (425-509)||(51046645-51046728)
chr1 (573-656)||(5783122-5783205)
chr1 (560-656)||(7944169-7944265)
chr1 (554-691)||(52439487-52439620)
chr1 (707-801)||(534416-534510)
chr1 (438-507)||(32268033-32268102)
chr1 (597-656)||(6613992-6614051)
chr1 (597-781)||(50107091-50107275)
chr1 (427-519)||(13925101-13925191)
chr1 (556-657)||(1001164-1001265)
chr1 (554-788)||(11060666-11060899)
chr1 (554-788)||(44719358-44719592)
chr1 (558-654)||(3117661-3117757)
chr1 (556-648)||(44019996-44020088)
chr1 (556-755)||(51450011-51450209)
chr1 (424-501)||(1107386-1107462)
chr1 (594-655)||(25037926-25037987)
chr1 (594-655)||(25043138-25043199)
chr1 (573-653)||(534574-534653)
chr1 (407-501)||(39421026-39421126)
chr1 (764-824)||(534322-534382)
chr1 (717-773)||(9340941-9340997)
chr1 (471-519)||(12173173-12173221)
chr1 (641-729)||(33342511-33342599)
chr1 (606-653)||(34088485-34088532)
chr1 (471-545)||(46289632-46289705)
chr1 (439-499)||(3894800-3894861)
chr1 (791-824)||(9340811-9340844)
chr1 (724-788)||(9339804-9339868)
chr1 (701-781)||(11059771-11059851)
chr1 (717-773)||(32665686-32665742)
chr1 (407-474)||(46289579-46289645)
chr1 (461-507)||(27210749-27210795)
chr1 (444-506)||(41898878-41898940)
chr1 (735-788)||(16249832-16249885)
[»] chr4 (41 HSPs)
chr4 (554-656)||(53771062-53771164)
chr4 (554-787)||(26172822-26173057)
chr4 (554-656)||(47878497-47878599)
chr4 (554-692)||(42278057-42278195)
chr4 (543-656)||(47874559-47874674)
chr4 (554-665)||(31844730-31844841)
chr4 (554-668)||(53770341-53770455)
chr4 (556-691)||(39868932-39869065)
chr4 (562-782)||(21623004-21623224)
chr4 (554-660)||(4703226-4703332)
chr4 (554-668)||(48740021-48740135)
chr4 (558-739)||(26170652-26170833)
chr4 (573-653)||(54574452-54574532)
chr4 (424-519)||(4867772-4867866)
chr4 (606-788)||(19050298-19050478)
chr4 (558-660)||(26685431-26685528)
chr4 (424-509)||(45674164-45674248)
chr4 (594-773)||(21621871-21622050)
chr4 (554-668)||(39870675-39870789)
chr4 (554-647)||(19051253-19051346)
chr4 (596-781)||(6039171-6039356)
chr4 (594-691)||(50694797-50694894)
chr4 (598-652)||(54574822-54574876)
chr4 (597-767)||(31844866-31845027)
chr4 (543-624)||(42391933-42392016)
chr4 (575-773)||(4701794-4701990)
chr4 (452-509)||(45683989-45684046)
chr4 (701-788)||(32244429-32244516)
chr4 (717-788)||(42278200-42278271)
chr4 (558-633)||(44158516-44158591)
chr4 (701-747)||(32244610-32244656)
chr4 (717-787)||(47878386-47878456)
chr4 (717-773)||(20599802-20599858)
chr4 (717-788)||(47874714-47874785)
chr4 (407-493)||(29722067-29722152)
chr4 (471-545)||(35911151-35911224)
chr4 (723-773)||(42391802-42391852)
chr4 (598-655)||(2786273-2786330)
chr4 (606-667)||(25810415-25810476)
chr4 (426-507)||(45257608-45257688)
chr4 (791-824)||(54574744-54574777)
[»] scaffold0034 (1 HSPs)
scaffold0034 (554-656)||(116063-116165)
[»] scaffold0039 (3 HSPs)
scaffold0039 (558-787)||(79085-79314)
scaffold0039 (554-668)||(79684-79798)
scaffold0039 (558-651)||(74331-74424)
[»] scaffold0045 (2 HSPs)
scaffold0045 (426-507)||(62583-62663)
scaffold0045 (426-507)||(69915-69995)
[»] scaffold0767 (2 HSPs)
scaffold0767 (554-668)||(5607-5721)
scaffold0767 (558-655)||(6264-6361)
[»] scaffold0169 (1 HSPs)
scaffold0169 (439-507)||(9025-9093)
[»] scaffold0209 (1 HSPs)
scaffold0209 (407-501)||(29349-29441)
[»] scaffold0237 (2 HSPs)
scaffold0237 (705-789)||(3106-3190)
scaffold0237 (704-789)||(1843-1928)
[»] scaffold0369 (1 HSPs)
scaffold0369 (604-668)||(9137-9201)
[»] scaffold0016 (1 HSPs)
scaffold0016 (543-618)||(36574-36650)


Alignment Details
Target: chr6 (Bit Score: 134; Significance: 3e-69; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 554 - 824
Target Start/End: Original strand, 30748007 - 30748268
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||||||||||| | |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||| ||||| |||||||||||||    
T  30748007 tcactttagtccctgattctgcacctcgctgtcacataggtccctgacttaggattaaatacaaacaagtctctgactctacactttcgttatcacttta 30748106  T
Q  654 gtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaa 753  Q
    ||| ||| |||||||        |||||||||||||||||||         ||||||||||||||||||||||||| |||||||||||||||||  ||||    
T  30748107 gtcgctgccgttaaaaaaaactattaagtgatgatgtggcac---------gctgacaaggagtatgacgtgtcacagggactaaagtgaaagtaaaaaa 30748197  T
Q  754 tggccactttggtccctgaatcgaaaatcgatatcttcaacttactgttaggtccctgactgtgcatactt 824  Q
    ||| || ||||||||||||||| |||||| ||||| |||| |||||||||| |||||||||||| ||||||    
T  30748198 tggtcaatttggtccctgaatcaaaaatcaatatcctcaatttactgttagatccctgactgtgtatactt 30748268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 554 - 668
Target Start/End: Complemental strand, 31219275 - 31219161
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||| ||||||||| |||||||||||||||||||| ||  | ||||||||||||||||||| ||||  |||||||  |||||||||||||||||||    
T  31219275 tcactttaatccctgactctgcacctcgctgtcacataggtcattaactcaggattaaatacaaagaagttcctgactcgacacttccgttatcacttta 31219176  T
Q  654 gtctctgtcgttaaa 668  Q
    ||||||| |||||||    
T  31219175 gtctctgacgttaaa 31219161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 554 - 653
Target Start/End: Original strand, 31218963 - 31219062
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||| || |||||| |||||||||||||||||||| ||| | ||||||||||||||||||| ||||  ||||||||||||||||||||||||||||    
T  31218963 tcactttaatctctgactctgcacctcgctgtcacataggtccttaactcaggattaaatacaaagaagttcctgactctgcacttccgttatcacttta 31219062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 407 - 519
Target Start/End: Complemental strand, 1947528 - 1947417
Alignment:
Q  407 taaagagtgtcctttgtgcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaa 506  Q
    |||||||||| |||   |||||||||||||| |||||||||||||||||||| ||| |||||||| |||| |||| ||||||||||||||||||| ||||    
T  1947528 taaagagtgttcttgaggcattggttaagag-aacataaatagaaataatttgttggaaaatggtaaaaagtgttaaattcaactttctaaaagtcaaaa 1947430  T
Q  507 agtaataatttcc 519  Q
    |||  ||||||||    
T  1947429 agttgtaatttcc 1947417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 407 - 518
Target Start/End: Original strand, 16441775 - 16441885
Alignment:
Q  407 taaagagtgtcctttgtgcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaa 506  Q
    |||||||||| |||||  |||||||||| || || ||||||| ||||||||| ||||||| |||||||||||||||||||||| ||||||||||| ||||    
T  16441775 taaagagtgttctttggacattggttaaaag-aatataaatataaataatttgttgaaaagtggtgaaaaatgttgaattcaaatttctaaaagtaaaaa 16441873  T
Q  507 agtaataatttc 518  Q
    |||  |||||||    
T  16441874 agttgtaatttc 16441885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 554 - 668
Target Start/End: Original strand, 23507957 - 23508070
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    ||||||||||| ||| || | |||||| ||||||||||| | ||||| ||||||||||||||||| || ||| ||||| | ||||||| |||||||||||    
T  23507957 tcactttagtctctg-ctctacacctccctgtcacataggttcctgattcaggattaaatacaaacaaatctatgactttacacttcctttatcacttta 23508055  T
Q  654 gtctctgtcgttaaa 668  Q
    ||| |||||||||||    
T  23508056 gtccctgtcgttaaa 23508070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 764 - 824
Target Start/End: Original strand, 30748280 - 30748340
Alignment:
Q  764 ggtccctgaatcgaaaatcgatatcttcaacttactgttaggtccctgactgtgcatactt 824  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||    
T  30748280 ggtccctgaatcgaaaatcaatatcctcaacttactgttaggtccctgactgtgtatactt 30748340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 438 - 501
Target Start/End: Complemental strand, 19646090 - 19646027
Alignment:
Q  438 gaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagt 501  Q
    ||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||| |||||||    
T  19646090 gaacataaatagaaaaaatttgttgaaaaatggtgaaaagtgttgaattcaactttttaaaagt 19646027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 705 - 789
Target Start/End: Original strand, 29856904 - 29856988
Alignment:
Q  705 gctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatct 789  Q
    |||||||||| | |||| |||||||  ||| ||||||| |||| |||||||| || ||||||| |||||||||||||| ||||||    
T  29856904 gctgacaaggtgcatgaggtgtcacaaggattaaagtggaagtagaaaatggtcattttggtctctgaatcgaaaatcaatatct 29856988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 566 - 660
Target Start/End: Complemental strand, 12676573 - 12676479
Alignment:
Q  566 ctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctg 660  Q
    |||||| ||||||||| |||||||  | || ||| ||||||||||||||||||  ||||||| | | |||||||  ||||||| |||||||||||    
T  12676573 ctgactctgcacctcgttgtcacaatggtctctgtctcaggattaaatacaaagtagtctctaaatgtgcacttttgttatcagtttagtctctg 12676479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 707 - 781
Target Start/End: Complemental strand, 19600206 - 19600133
Alignment:
Q  707 tgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaat 781  Q
    |||||||| | ||||  |||||| ||||||||||||||||| |||||||| ||||||||| ||| ||||||||||    
T  19600206 tgacaaggtgcatgaaatgtcacagggactaaagtgaaagtagaaaatggtcactttggt-cctaaatcgaaaat 19600133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 579 - 639
Target Start/End: Complemental strand, 6468871 - 6468811
Alignment:
Q  579 tcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcactt 639  Q
    ||||||||||| || ||||||||||| |||||||||||||  ||||||||| | |||||||    
T  6468871 tcgctgtcacaaaggtccctgactcatgattaaatacaaaatagtctctgaatgtgcactt 6468811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 501
Target Start/End: Complemental strand, 5138565 - 5138503
Alignment:
Q  438 gaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagt 501  Q
    ||||||||||| ||||| ||| || ||||||  ||||||||||||||||||| |||||||||||    
T  5138565 gaacataaatacaaatattttattaaaaaata-tgaaaaatgttgaattcaaatttctaaaagt 5138503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 407 - 501
Target Start/End: Original strand, 27127493 - 27127586
Alignment:
Q  407 taaagagtgtcctttgtgcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagt 501  Q
    |||||||||||| |  ||||||| |||||| ||  | ||||||||||| | | |||| ||||||||||||||| |||||| |||||| |||||||    
T  27127493 taaagagtgtccatgatgcattgtttaagatgataa-aaatagaaatattgtattgagaaatggtgaaaaatgatgaatttaactttttaaaagt 27127586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 704 - 789
Target Start/End: Original strand, 29845638 - 29845723
Alignment:
Q  704 tgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatct 789  Q
    ||||||||||| | |||| ||||| |  | ||||||||| |||| |||||| | || ||||||| |||||||||||||| ||||||    
T  29845638 tgctgacaaggtgcatgaggtgtcgcaagaactaaagtggaagtagaaaatagtcattttggtctctgaatcgaaaatcaatatct 29845723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 98; Significance: 8e-48; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 554 - 796
Target Start/End: Original strand, 21069297 - 21069538
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    ||||||||||| |||||| ||||||||| ||||||| || || ||||||||||||||||||||||||||||  |||||||||||||| ||| ||||||||    
T  21069297 tcactttagtctctgactctgcacctcgttgtcacagaggtctctgactcaggattaaatacaaataagtccttgactctgcacttctgttttcacttta 21069396  T
Q  654 gtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaa 753  Q
     | | || |||||||       |||||||||||||||||||| || |||||| ||||||||||||||||||||||   ||| |||||||||||| |||||    
T  21069397 atatatgccgttaaaaaattttgttaagtgatgatgtggcacatgacttatgttgacaaggagtatgacgtgtcatatggattaaagtgaaagtagaaaa 21069496  T
Q  754 tggccactttggtccctgaatcgaaaatcgatatcttcaactt 796  Q
    ||| || |||| ||||||||  ||||||| ||||  |||||||    
T  21069497 tggtca-tttgatccctgaactgaaaatcaatattctcaactt 21069538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 567 - 824
Target Start/End: Original strand, 19182971 - 19183218
Alignment:
Q  567 tgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgtta 666  Q
    ||||| |||||||||||||||||||| || |||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||  ||   |||    
T  19182971 tgactttgcacctcgctgtcacataggtctctgactcaggattaaatacaaataagttcctgactctacacttccgttatcactttagtccttgcgatta 19183070  T
Q  667 aannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggt 766  Q
    ||       ||||||||||||||||||||         ||| ||||||||||||||||||||   ||||||||||||||||  |||||||  |||||| |    
T  19183071 aaaaaatatgttaagtgatgatgtggcac---------gctaacaaggagtatgacgtgtcatatggactaaagtgaaagtaaaaaatggtgactttgct 19183161  T
Q  767 ccctgaatcgaaaatcgatatcttcaacttactgttaggtccctgactgtgcatactt 824  Q
    | |||||||||||||| ||||| |||| |||||||||| ||||| |||||| ||||||    
T  19183162 ctctgaatcgaaaatcaatatcctcaatttactgttagatccct-actgtgtatactt 19183218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 584 - 824
Target Start/End: Complemental strand, 19186305 - 19186075
Alignment:
Q  584 gtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaagtg 683  Q
    ||||||||| ||||||||| ||||||||||||||| |||||||||||||| || |||||||||||||||||||  ||||||||||       |||||| |    
T  19186305 gtcacataggtccctgacttaggattaaatacaaacaagtctctgactctacatttccgttatcactttagtccttgtcgttaaaacaatctgttaagcg 19186206  T
Q  684 atgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcg 783  Q
    ||||||||||||         ||||||||||||||||||||||||| ||||| |||||||||||  ||||| | ||||||||| |||| ||| ||||||     
T  19186205 atgatgtggcac---------gctgacaaggagtatgacgtgtcacagggacaaaagtgaaagtaaaaaatagtcactttggt-cctgcatcaaaaatca 19186116  T
Q  784 atatcttcaacttactgttaggtccctgactgtgcatactt 824  Q
    || || |||| ||| |||||| |||||||||||| ||||||    
T  19186115 atgtcctcaatttattgttagatccctgactgtgtatactt 19186075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 676 - 824
Target Start/End: Complemental strand, 13651159 - 13651006
Alignment:
Q  676 gttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtg-----tcacggggactaaagtgaaagtcgaaaatggccactttggtccct 770  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||     |||| |||||||||||||||||  ||||||| |||||| ||||||    
T  13651159 gttaagtgatgatgtggcgcatggcttatgctgacaaggagtatgacgtgacatgtcacagggactaaagtgaaagtaaaaaatggtcactttagtccct 13651060  T
Q  771 gaatcgaaaatcgatatcttcaacttactgttaggtccctgactgtgcatactt 824  Q
    ||| |||||||| |||||  |||||||||||||||||||||||| |||||||||    
T  13651059 gaaccgaaaatcaatatccgcaacttactgttaggtccctgactatgcatactt 13651006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 556 - 788
Target Start/End: Original strand, 9537033 - 9537264
Alignment:
Q  556 actttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagt 655  Q
    |||||||||||| ||| |||||||||||||||||||| || |||||| || |||||||||||| |||||  ||||| ||||||||| |||||||||||||    
T  9537033 actttagtccctcactctgcacctcgctgtcacataggtctctgacttagaattaaatacaaagaagtc-atgactgtgcacttccattatcactttagt 9537131  T
Q  656 ctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatg 755  Q
    | ||| |||||||       | |||||||||||||||||| ||  ||| |  ||||||   ||||| ||||||| | ||||||||||||||| ||||||     
T  9537132 cactgacgttaaataattatggtaagtgatgatgtggcacatgttttacgacgacaagtcatatgatgtgtcacagtgactaaagtgaaagtagaaaata 9537231  T
Q  756 gccactttggtccctgaatcgaaaatcgatatc 788  Q
    | ||||||| |||||||||| |||||| |||||    
T  9537232 gtcactttgatccctgaatcaaaaatcaatatc 9537264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 554 - 693
Target Start/End: Original strand, 4592869 - 4593008
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||||||||||| | || | ||||||||||||||  ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  4592869 tcactttagtccctgattatgtagctcgctgtcacataagtccctgactcaagattaaatacaaataagtccctgactctgcacttccgttatcacttta 4592968  T
Q  654 gtctctgtcgttaaannnnnnngttaagtgatgatgtggc 693  Q
    ||| ||| |||||||       ||||||||||||||||||    
T  4592969 gtccctgacgttaaaaaaatctgttaagtgatgatgtggc 4593008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 554 - 668
Target Start/End: Original strand, 8074459 - 8074573
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||||||||||| | |||| ||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  8074459 tcactttagtccctgattatgcagctcgctgtcacataagtccctgactcaggattaaatacaaataagtccctgactctgcacttccgttatcacttta 8074558  T
Q  654 gtctctgtcgttaaa 668  Q
    ||  ||| |||||||    
T  8074559 gttcctgacgttaaa 8074573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 554 - 775
Target Start/End: Complemental strand, 9538164 - 9537943
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    ||||||| |||||||||| |||| |||| ||||| |||| ||||||||||||||||||||||||| |||||||||| | |||||||||||||||| ||||    
T  9538164 tcactttggtccctgactctgcatctcgttgtcatataggtccctgactcaggattaaatacaaagaagtctctgattgtgcacttccgttatcatttta 9538065  T
Q  654 gtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaa 753  Q
    |||||||  ||||||       |||||||||| ||||| ||| ||  ||| | ||| | |   ||||| || ||||  ||||||||||||||||  ||||    
T  9538064 gtctctgatgttaaataattatgttaagtgattatgtgacacatgttttacgatgatatgacatatgatgtttcacatggactaaagtgaaagtataaaa 9537965  T
Q  754 tggccactttggtccctgaatc 775  Q
    ||| ||||||||||||||||||    
T  9537964 tggtcactttggtccctgaatc 9537943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 566 - 693
Target Start/End: Original strand, 25590451 - 25590577
Alignment:
Q  566 ctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgtt 665  Q
    |||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||| |||||| ||||    
T  25590451 ctgactctgcacctcgctgtcacataggtccctgactc-ggattaaatacaaataagtctctgattctgcacttctgttatcactttaatctctgacgtt 25590549  T
Q  666 aaannnnnnngttaagtgatgatgtggc 693  Q
    |||       ||||||||||||||||||    
T  25590550 aaaaaattttgttaagtgatgatgtggc 25590577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 554 - 656
Target Start/End: Complemental strand, 28591229 - 28591127
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||  ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||| |||||||||||    
T  28591229 tcactttgatccctgactctgcacctcgctgtcacataggtccctgactcaggattaaatacaaataaatccctgactctgcacttcctttatcacttta 28591130  T
Q  654 gtc 656  Q
    |||    
T  28591129 gtc 28591127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 554 - 824
Target Start/End: Complemental strand, 31947152 - 31946898
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    ||||||||||| |||| | ||||| | | ||||| |||||| ||| ||| |  |||||||||||| |||||| |||||||  ||||||||||||||||||    
T  31947152 tcactttagtctctgattctgcactttgttgtcatatagattccttacttaaaattaaatacaaacaagtctatgactctagacttccgttatcacttta 31947053  T
Q  654 gtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaa 753  Q
    ||| |||  ||||||       ||||||||||||||||||||         |||||||| |||||| |||||       |||||||||||||||  ||||    
T  31947052 gtcactgctgttaaaaaaatatgttaagtgatgatgtggcac---------gctgacaatgagtattacgtg-------gactaaagtgaaagtaaaaaa 31946969  T
Q  754 tggccactttggtccctgaatcgaaaatcgatatcttcaacttactgttaggtccctgactgtgcatactt 824  Q
    ||| ||||||||||||||||||||||||| |||||  ||| |||||||||| |||||||||||| ||||||    
T  31946968 tggtcactttggtccctgaatcgaaaatcaatatccacaatttactgttagatccctgactgtgtatactt 31946898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 554 - 668
Target Start/End: Complemental strand, 546150 - 546037
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    ||||||||||||| || | |||| ||||||||||||||| ||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||    
T  546150 tcactttagtccc-gattttgcagctcgctgtcacataggtccctgactcaggattaaatacagataagtccttgactctgcacttccgttatcacttta 546052  T
Q  654 gtctctgtcgttaaa 668  Q
    ||| ||| |||||||    
T  546051 gtccctgacgttaaa 546037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 554 - 693
Target Start/End: Original strand, 2464677 - 2464816
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    ||||||||||| |||| | |||| |||||||||| |||| ||| ||||||| ||||||||||||||||||| || ||||||||||| |||||||||||||    
T  2464677 tcactttagtcactgattctgcagctcgctgtcatataggtccatgactcatgattaaatacaaataagtccctaactctgcacttacgttatcacttta 2464776  T
Q  654 gtctctgtcgttaaannnnnnngttaagtgatgatgtggc 693  Q
    ||||||| |||||||       ||||||||||||||||||    
T  2464777 gtctctgacgttaaaaaaatttgttaagtgatgatgtggc 2464816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 554 - 668
Target Start/End: Original strand, 16611736 - 16611850
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||| | | ||||| | |||||||||||||||||| || |||||||||||||||||||||| ||| |||||| | |||||||||||||||||||||    
T  16611736 tcactttaattcttgactctacacctcgctgtcacataggtctctgactcaggattaaatacaaagaagcctctgattatgcacttccgttatcacttta 16611835  T
Q  654 gtctctgtcgttaaa 668  Q
    ||||||| |||||||    
T  16611836 gtctctgacgttaaa 16611850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 554 - 693
Target Start/End: Complemental strand, 14891258 - 14891123
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    ||||||| |||||| ||| |||||||||||||||||||| || |||||||| |||||||| |||    |||||||||||| |||||||||||||||||||    
T  14891258 tcactttggtccctcactctgcacctcgctgtcacataggtctctgactcatgattaaatgcaa----gtctctgactctacacttccgttatcacttta 14891163  T
Q  654 gtctctgtcgttaaannnnnnngttaagtgatgatgtggc 693  Q
    ||||||| |||||||       ||||||||||||||||||    
T  14891162 gtctctgacgttaaaaaaatatgttaagtgatgatgtggc 14891123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 554 - 668
Target Start/End: Complemental strand, 2466889 - 2466775
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    ||||||| ||| |||||| ||||||||||| |||||||| ||  ||| ||||||||||||| ||||||||| || |||||||||||||||||||||||||    
T  2466889 tcactttggtctctgactctgcacctcgctatcacataggtcattgattcaggattaaataaaaataagtccctaactctgcacttccgttatcacttta 2466790  T
Q  654 gtctctgtcgttaaa 668  Q
    ||| ||| |||||||    
T  2466789 gtccctgacgttaaa 2466775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 554 - 640
Target Start/End: Original strand, 18400198 - 18400284
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttc 640  Q
    |||||||||||||||||| |||||||| ||||||||||| ||| ||||||||||||||||| ||| ||||| |||||||||||||||    
T  18400198 tcactttagtccctgactctgcacctcactgtcacataggtccttgactcaggattaaataaaaagaagtcactgactctgcacttc 18400284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 13649348 - 13649435
Alignment:
Q  4 ggaggagcagagacttctgatcgacatcattctttgtaaaatcgaaagatttggtaacacaaaggggataagccaagattcctggtcga 92  Q
    |||| ||| |||||||||||| |||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  13649348 ggagaagctgagacttctgattgacaccattctttgtgaaatc-aaagatttggtaacacaaaggggataagccaagattcccggtcga 13649435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 567 - 691
Target Start/End: Complemental strand, 8075935 - 8075811
Alignment:
Q  567 tgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgtta 666  Q
    ||||| ||||||||||||| | |||||||||||| ||| ||||||||||||| |||| ||||| ||||||||| |||||||||||||||| ||| ||||     
T  8075935 tgactctgcacctcgctgttagatagatccctgattcaagattaaatacaaaaaagtatctgattctgcactttcgttatcactttagtccctgacgttt 8075836  T
Q  667 aannnnnnngttaagtgatgatgtg 691  Q
    ||       ||||||||||||||||    
T  8075835 aaaaaatctgttaagtgatgatgtg 8075811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 554 - 653
Target Start/End: Complemental strand, 40612774 - 40612675
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||||||||||| | |||| ||| ||||||| ||| ||||||||||||||||||||||| |||  |  ||||||||||||||||||||||||||||    
T  40612774 tcactttagtccctgattttgcagctcactgtcacgtaggtccctgactcaggattaaatacagatattttcctgactctgcacttccgttatcacttta 40612675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 578 - 693
Target Start/End: Complemental strand, 32641817 - 32641702
Alignment:
Q  578 ctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngt 677  Q
    |||| |||||| ||| ||||| ||||| ||||||||||||||||||  |||||||||||||||||||||||||||| || ||| |||||||       ||    
T  32641817 ctcgttgtcacgtaggtcccttactcaagattaaatacaaataagttgctgactctgcacttccgttatcactttaatccctgacgttaaaaaaatatgt 32641718  T
Q  678 taagtgatgatgtggc 693  Q
    ||||||||||||||||    
T  32641717 taagtgatgatgtggc 32641702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 573 - 691
Target Start/End: Original strand, 32640315 - 32640433
Alignment:
Q  573 tgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnn 672  Q
    |||||||| |||||||||||  || | ||||||||||||||||||||||||| || |||||  ||||| ||||||||||||||||||| |||||||        
T  32640315 tgcacctcactgtcacataggaccataactcaggattaaatacaaataagtccctaactctaaacttctgttatcactttagtctctgacgttaaaaaaa 32640414  T
Q  673 nnngttaagtgatgatgtg 691  Q
       ||||||||||||||||    
T  32640415 tttgttaagtgatgatgtg 32640433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 556 - 660
Target Start/End: Original strand, 18004648 - 18004752
Alignment:
Q  556 actttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagt 655  Q
    |||||||||||||||| |||||||| |||||||| |  ||  |  || ||||||||||||||| | |||| |||||||||||||||||||||||||||||    
T  18004648 actttagtccctgactctgcacctcactgtcacaaaagtctatagcttaggattaaatacaaagaggtctatgactctgcacttccgttatcactttagt 18004747  T
Q  656 ctctg 660  Q
    |||||    
T  18004748 ctctg 18004752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 565 - 660
Target Start/End: Original strand, 544668 - 544762
Alignment:
Q  565 cctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctg 660  Q
    ||||||| ||||| ||| ||||| |||| || |||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||| ||||    
T  544668 cctgactctgcacttcg-tgtcagataggtctctgactcaggattaaatacaaataagtcactgactctgcacttccgttataaatttagtttctg 544762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 554 - 616
Target Start/End: Complemental strand, 13651234 - 13651173
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaataca 616  Q
    |||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  13651234 tcactttagtccttgactgtgcacct-gctgtcacataggtccctgactcaggattaaataca 13651173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 554 - 659
Target Start/End: Original strand, 16979000 - 16979105
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||||||| ||||| ||||||| |||| |||| || ||  |||||||| ||||||| |||||||||| || |||||| |||| |||||||| ||||    
T  16979000 tcactttagtccttgactttgcaccttgctgccacaaaggtcattgactcagaattaaatgcaaataagtccctaactctgtacttacgttatcatttta 16979099  T
Q  654 gtctct 659  Q
    ||||||    
T  16979100 gtctct 16979105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 592 - 651
Target Start/End: Complemental strand, 4594176 - 4594118
Alignment:
Q  592 gatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactt 651  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||    
T  4594176 gatccctgactcaggattaaatacaaataagtc-atgactctgcacttccattatcactt 4594118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 554 - 659
Target Start/End: Original strand, 13483029 - 13483133
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    ||||||||||||| |||| || | |||||  ||| |||| | ||||||||| ||||||||| ||| |||||||| ||||||||||| ||||||||||||     
T  13483029 tcactttagtccc-gactctgtatctcgcattcagataggttcctgactcatgattaaatataaagaagtctcttactctgcactttcgttatcactttt 13483127  T
Q  654 gtctct 659  Q
    ||||||    
T  13483128 gtctct 13483133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 764 - 817
Target Start/End: Original strand, 19183229 - 19183282
Alignment:
Q  764 ggtccctgaatcgaaaatcgatatcttcaacttactgttaggtccctgactgtg 817  Q
    ||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||    
T  19183229 ggtccctaaatcgaaaatcaatatcatcaacttactgttaggtccctgactgtg 19183282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 701 - 782
Target Start/End: Complemental strand, 32555514 - 32555434
Alignment:
Q  701 ttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatc 782  Q
    ||||||||||||||||||||| |||||||  |||||||||||||||| |||||| | ||| ||||| |||||| ||||||||    
T  32555514 ttatgctgacaaggagtatgaggtgtcacatggactaaagtgaaagtagaaaattgtcac-ttggttcctgaaccgaaaatc 32555434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 717 - 788
Target Start/End: Original strand, 2464820 - 2464891
Alignment:
Q  717 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatc 788  Q
    ||||| ||||||| ||||| ||||||||||| |||||||| |||||||||||||||| | |||||| |||||    
T  2464820 tatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatc 2464891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 609 - 655
Target Start/End: Original strand, 14881010 - 14881056
Alignment:
Q  609 taaatacaaataagtctctgactctgcacttccgttatcactttagt 655  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||    
T  14881010 taaacacaaataagtccctgactctgcacttccgttatcactttagt 14881056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 586 - 693
Target Start/End: Original strand, 28589739 - 28589846
Alignment:
Q  586 cacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaagtgat 685  Q
    ||||||| |||||||||||  ||||||||||||||  | | ||||| || |||||||||| || ||||||||||| |||||||       ||||||||||    
T  28589739 cacataggtccctgactcataattaaatacaaatacatttttgactttgtacttccgttaccattttagtctctgacgttaaaaaaatctgttaagtgat 28589838  T
Q  686 gatgtggc 693  Q
    ||||||||    
T  28589839 gatgtggc 28589846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 554 - 651
Target Start/End: Complemental strand, 13483275 - 13483174
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcagg----attaaatacaaataagtctctgactctgcacttccgttatcac 649  Q
    |||| ||||||  ||||| |||||||||||| ||| ||| ||  ||||||| |    |||||||||||| |||||||||||| |||||||||||||||||    
T  13483275 tcacgttagtctttgactctgcacctcgctgccacgtaggtctttgactcatgattaattaaatacaaacaagtctctgactttgcacttccgttatcac 13483176  T
Q  650 tt 651  Q
    ||    
T  13483175 tt 13483174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 764 - 824
Target Start/End: Complemental strand, 19186063 - 19186003
Alignment:
Q  764 ggtccctgaatcgaaaatcgatatcttcaacttactgttaggtccctgactgtgcatactt 824  Q
    ||||||||||||||||||| ||||| || ||||||||||||||| |||||| || ||||||    
T  19186063 ggtccctgaatcgaaaatcaatatcatctacttactgttaggtctctgactttgtatactt 19186003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 717 - 773
Target Start/End: Complemental strand, 28591085 - 28591029
Alignment:
Q  717 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaa 773  Q
    ||||| ||||||| ||||| ||||||||||| |||||||| ||||||||||||||||    
T  28591085 tatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaa 28591029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 442 - 509
Target Start/End: Complemental strand, 28782773 - 28782706
Alignment:
Q  442 ataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaagt 509  Q
    ||||||||||||||||| || |||||| || |||| ||||||||||||| || ||||||| |||||||    
T  28782773 ataaatagaaataatttgttaaaaaattgtaaaaagtgttgaattcaacattttaaaagtaaaaaagt 28782706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 717 - 787
Target Start/End: Original strand, 8074601 - 8074671
Alignment:
Q  717 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 787  Q
    ||||| ||||||| || || ||||||||||| |||||||| |||||||||||||||| | |||||| ||||    
T  8074601 tatgaggtgtcacaggtaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatat 8074671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 717 - 787
Target Start/End: Complemental strand, 8075805 - 8075735
Alignment:
Q  717 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 787  Q
    ||||| |||||||  |||| |||||||||||||||||||  |||||||||||||||| | |||||| ||||    
T  8075805 tatgaggtgtcacaaggaccaaagtgaaagtcgaaaatgatcactttggtccctgaaccaaaaatcaatat 8075735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 717 - 787
Target Start/End: Original strand, 25590581 - 25590651
Alignment:
Q  717 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 787  Q
    ||||| ||||||| ||||| ||||||||||| |||||||| |||||||||| ||||| | |||||| ||||    
T  25590581 tatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtctctgaaccaaaaatcaatat 25590651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 717 - 787
Target Start/End: Original strand, 40611411 - 40611481
Alignment:
Q  717 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 787  Q
    ||||| ||||||| ||||| ||||||||||| |||||||| ||||| |||||||||| | |||||| ||||    
T  40611411 tatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcacttgggtccctgaaccaaaaatcaatat 40611481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 731 - 787
Target Start/End: Original strand, 4593025 - 4593081
Alignment:
Q  731 gggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 787  Q
    ||||| ||||||||||| |||||||| |||||||||||||||| | |||||| ||||    
T  4593025 gggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatat 4593081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 438 - 494
Target Start/End: Complemental strand, 10317315 - 10317259
Alignment:
Q  438 gaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttc 494  Q
    ||||| ||||||||| ||| | |||||||||| |||||| |||||||||||||||||    
T  10317315 gaacaaaaatagaaagaatgtgttgaaaaatgatgaaaagtgttgaattcaactttc 10317259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 764 - 824
Target Start/End: Complemental strand, 31946886 - 31946826
Alignment:
Q  764 ggtccctgaatcgaaaatcgatatcttcaacttactgttaggtccctgactgtgcatactt 824  Q
    ||||| ||||||||||||| ||||| |||||||| ||||||||| |||||| || ||||||    
T  31946886 ggtccttgaatcgaaaatcaatatcatcaacttattgttaggtcactgactctgtatactt 31946826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 723 - 787
Target Start/End: Original strand, 32640445 - 32640509
Alignment:
Q  723 gtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 787  Q
    ||||||| ||||| ||||||||||| |||||||| ||||||||||| |||| | |||||| ||||    
T  32640445 gtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccttgaaccaaaaatcaatat 32640509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 717 - 787
Target Start/End: Original strand, 14889920 - 14889990
Alignment:
Q  717 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 787  Q
    ||||| ||||||  ||||| ||||| ||||| |||||||| |||||||||||||||| | |||||| ||||    
T  14889920 tatgaggtgtcatagggaccaaagtaaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatat 14889990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 717 - 787
Target Start/End: Complemental strand, 14891119 - 14891049
Alignment:
Q  717 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 787  Q
    ||||| |||||||  |||| ||||||| ||| |||||||| |||||| ||||||||||| |||||| ||||    
T  14891119 tatgaggtgtcacaaggaccaaagtgatagtagaaaatggtcactttagtccctgaatcaaaaatcaatat 14891049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 717 - 787
Target Start/End: Complemental strand, 40612631 - 40612561
Alignment:
Q  717 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 787  Q
    ||||| |||||||  |||| ||||||||||| ||||||||  ||||||||||||||| | |||||| ||||    
T  40612631 tatgaggtgtcacaaggaccaaagtgaaagtagaaaatggttactttggtccctgaaccaaaaatcaatat 40612561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 791 - 824
Target Start/End: Original strand, 544966 - 544999
Alignment:
Q  791 caacttactgttaggtccctgactgtgcatactt 824  Q
    ||||||| ||||||||||||||||||||||||||    
T  544966 caacttattgttaggtccctgactgtgcatactt 544999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 791 - 824
Target Start/End: Original strand, 4593174 - 4593207
Alignment:
Q  791 caacttactgttaggtccctgactgtgcatactt 824  Q
    |||| |||||||||||||||||||||||||||||    
T  4593174 caacatactgttaggtccctgactgtgcatactt 4593207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 707 - 788
Target Start/End: Original strand, 18004799 - 18004880
Alignment:
Q  707 tgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatc 788  Q
    ||||||||  | ||| ||||||| | ||||||| ||||||| |||||| | |||||||||||||||||| ||| || |||||    
T  18004799 tgacaaggcatgtgaggtgtcacagagactaaaatgaaagtagaaaatagtcactttggtccctgaatcaaaattcaatatc 18004880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 554 - 591
Target Start/End: Complemental strand, 24900447 - 24900410
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacata 591  Q
    ||||||| |||||||||| |||||||||||||||||||    
T  24900447 tcactttggtccctgactctgcacctcgctgtcacata 24900410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 791 - 824
Target Start/End: Complemental strand, 40612462 - 40612429
Alignment:
Q  791 caacttactgttaggtccctgactgtgcatactt 824  Q
    |||| |||||||||||||||||||||||||||||    
T  40612462 caacctactgttaggtccctgactgtgcatactt 40612429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 5e-46; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 554 - 668
Target Start/End: Original strand, 48646057 - 48646171
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    ||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  48646057 tcactttggtccctgactatgcacctcgctgtcacataggtccctgactcaggattaaatacaaataagtccctgactctacacttccgttatcacttta 48646156  T
Q  654 gtctctgtcgttaaa 668  Q
    |||||||||||||||    
T  48646157 gtctctgtcgttaaa 48646171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 556 - 693
Target Start/End: Complemental strand, 10899186 - 10899049
Alignment:
Q  556 actttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagt 655  Q
    ||||| |||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10899186 actttggtccctgactctgcacctcgctgtcacatagatccttgacccaggattaaatacaaataagtctctgactctgcacttccgttatcactttagt 10899087  T
Q  656 ctctgtcgttaaannnnnnngttaagtgatgatgtggc 693  Q
    | ||| |||||||       ||||||||||||||||||    
T  10899086 ccctgacgttaaaaaaatctgttaagtgatgatgtggc 10899049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 554 - 693
Target Start/End: Original strand, 35727707 - 35727845
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||  ||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  35727707 tcactttgatccctgactctgcacctcgctgtcacataggtccctgactcaggattaaatataaataagtctctgactctgcacatccgttatcacttta 35727806  T
Q  654 gtctctgtcgttaaannnnnnngttaagtgatgatgtggc 693  Q
    ||| ||| |||||||       ||||||||||||||||||    
T  35727807 gtc-ctgacgttaaaaatctctgttaagtgatgatgtggc 35727845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 554 - 650
Target Start/End: Original strand, 44333147 - 44333243
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcact 650  Q
    ||||||| |||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  44333147 tcactttggtccctgactctgcacctcgctgtcacataggtccctgactcatgattaaatacaaataagtctctgactctgcacttccgttatcact 44333243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 554 - 690
Target Start/End: Original strand, 7258283 - 7258419
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    ||||||| |||||||||| | ||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  7258283 tcactttggtccctgactctacacctcgttgtcacataggtccctaactcaggattaaatacaaataagtctctgactctgcacttctgttatcacttta 7258382  T
Q  654 gtctctgtcgttaaannnnnnngttaagtgatgatgt 690  Q
    ||| ||| |||||||       |||||||||||||||    
T  7258383 gtccctgacgttaaaaaaatctgttaagtgatgatgt 7258419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 554 - 668
Target Start/End: Complemental strand, 48788787 - 48788673
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||  ||| ||||| |||||||||||||||||||| |||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||    
T  48788787 tcactttgatccttgactttgcacctcgctgtcacataggtccctgactcataattaaatataaataagtctctgactctgcacttccgttatcacttta 48788688  T
Q  654 gtctctgtcgttaaa 668  Q
    ||||||| |||||||    
T  48788687 gtctctgacgttaaa 48788673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 554 - 787
Target Start/End: Original strand, 46286511 - 46286744
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||||||||||||| | || |||||||| | | || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  46286511 tcactttagtccctgactcttcatctcgctgttagaaaggtccctgactcaggattaaatacaaataagtctctgactctgcacttctgttatcacttta 46286610  T
Q  654 gtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaa 753  Q
     |||||  |||||||       ||||||||||||| |||| | |  ||||| || ||||| ||||||| |||| ||   ||| ||| ||||||| |||||    
T  46286611 atctctaccgttaaaaaaatatgttaagtgatgatatggcgcatatcttatactcacaagaagtatgatgtgttacattgaccaaaatgaaagtagaaaa 46286710  T
Q  754 tggccactttggtccctgaatcgaaaatcgatat 787  Q
    | | ||||||| ||| |||| | |||||| ||||    
T  46286711 tagtcactttgatccttgaaccaaaaatcaatat 46286744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 554 - 655
Target Start/End: Original strand, 43457465 - 43457566
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||||||||||| | |||| ||||||||| ||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  43457465 tcactttagtccctgattctgcagctcgctgtcgcataggtccctgactcaggattaaatacaaataagtccccgactctgcacttccgttatcacttta 43457564  T
Q  654 gt 655  Q
    ||    
T  43457565 gt 43457566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 566 - 781
Target Start/End: Complemental strand, 8048887 - 8048672
Alignment:
Q  566 ctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgtt 665  Q
    |||||| |||||||||||| |||| || || |||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |  ||||    
T  8048887 ctgactctgcacctcgctgacacaaaggtctctgactcaagattaaatacaaagaagtctccgactctgcacttccgttatcactttaatctttaacgtt 8048788  T
Q  666 aaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttgg 765  Q
    |||        ||||||||||||||| ||| ||   || | |||||     ||||| |||||||  |||||||||||||||| |||||||| ||||||||    
T  8048787 aaataattctattaagtgatgatgtgtcacatgttatacgatgacataacatatgatgtgtcacatggactaaagtgaaagtagaaaatggtcactttgg 8048688  T
Q  766 tccctgaatcgaaaat 781  Q
    |||||||| |||||||    
T  8048687 tccctgaaccgaaaat 8048672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 558 - 668
Target Start/End: Original strand, 8374926 - 8375036
Alignment:
Q  558 tttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtct 657  Q
    |||||||||||||| |||||||||||||||||||| || ||||||||| |||||||||||| |||| ||||| | |||||||||||||||||||||||||    
T  8374926 tttagtccctgactctgcacctcgctgtcacataggtctctgactcagaattaaatacaaaaaagtttctgattttgcacttccgttatcactttagtct 8375025  T
Q  658 ctgtcgttaaa 668  Q
     || |||||||    
T  8375026 ttgacgttaaa 8375036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 554 - 668
Target Start/End: Complemental strand, 30925123 - 30925009
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||| ||||||| | |||| ||| | ||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  30925123 tcactttaatccctgattctgcagctcccagtcacataggtccttgactcaggattaaatacaaataagtctctgactatgcacttccgttattacttta 30925024  T
Q  654 gtctctgtcgttaaa 668  Q
    ||||||| |||||||    
T  30925023 gtctctgacgttaaa 30925009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 411 - 518
Target Start/End: Complemental strand, 48705750 - 48705644
Alignment:
Q  411 gagtgtcctttgtgcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaagta 510  Q
    ||||| |||| | |||||| ||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  48705750 gagtggccttggggcattgtttaagag-aacataaatagaaataatttgttgaaaaatggtgaaaagtgttgaattcaactttctaaaagttaaaaagtt 48705652  T
Q  511 ataatttc 518  Q
     |||||||    
T  48705651 gtaatttc 48705644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 554 - 668
Target Start/End: Complemental strand, 48647558 - 48647444
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    ||||||||| |||||| | | || |||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||    
T  48647558 tcactttagaccctgattctacagctcgctatcacataggtccctgactcaggattaaatacaaataagtctctcactctgcacttttgttatcacttta 48647459  T
Q  654 gtctctgtcgttaaa 668  Q
    ||| ||| |||||||    
T  48647458 gtccctgacgttaaa 48647444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 554 - 656
Target Start/End: Original strand, 48777264 - 48777366
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    ||||||||||| |||| | |||| ||||||||||||||  ||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||    
T  48777264 tcactttagtctctgattctgcagctcgctgtcacataagtccctgactcatgattaaatacaaataattccctgactctgcacttccgttatcacttta 48777363  T
Q  654 gtc 656  Q
    |||    
T  48777364 gtc 48777366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 575 - 691
Target Start/End: Complemental strand, 13578414 - 13578299
Alignment:
Q  575 cacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnn 674  Q
    ||||||||||||| | ||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||          
T  13578414 cacctcgctgtcataaagatcactgactcagaattaaatacaaataagtcactgactctgcacttccgttatcactttagtc-ctgacgttaaataatta 13578316  T
Q  675 ngttaagtgatgatgtg 691  Q
     ||||||||||||||||    
T  13578315 tgttaagtgatgatgtg 13578299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 554 - 695
Target Start/End: Complemental strand, 44334564 - 44334424
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||||| ||||| | |||| |||||||| |||||| ||||||||||| ||||||||| ||||||||| |||||||||||||||| |||||||||||    
T  44334564 tcactttagttcctgattctgcagctcgctgttacataggtccctgactcatgattaaatataaataagtccctgactctgcacttccattatcacttta 44334465  T
Q  654 gtctctgtcgttaaannnnnnngttaagtgatgatgtggcac 695  Q
    ||| ||| | |||||       ||||||||||||||||||||    
T  44334464 gtccctgacattaaa-aaatatgttaagtgatgatgtggcac 44334424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 578 - 693
Target Start/End: Complemental strand, 7259775 - 7259660
Alignment:
Q  578 ctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngt 677  Q
    ||||||||||||| | || |||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||| |||||||       ||    
T  7259775 ctcgctgtcacatgggtctctgattcaggattaaatacaaataagtccctgactctacacttccgttatcactttagtccctgacgttaaaaaaatctgt 7259676  T
Q  678 taagtgatgatgtggc 693  Q
    ||||||||||||||||    
T  7259675 taagtgatgatgtggc 7259660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 554 - 656
Target Start/End: Complemental strand, 8375698 - 8375596
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||| |||||||||||||  ||||| | ||||||||||| ||||||||||| ||||||||||||| |||| |||||||||||||||||||||||| ||||    
T  8375698 tcacattagtccctgacttcgcaccgcactgtcacataggtccctgactcatgattaaatacaaagaagtttctgactctgcacttccgttatcaattta 8375599  T
Q  654 gtc 656  Q
    |||    
T  8375598 gtc 8375596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 554 - 693
Target Start/End: Complemental strand, 35729201 - 35729062
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||| ||||||| | |||| ||||||||||||||| ||| ||||| ||||||| ||||||||||||| ||||||||||||||||| ||||||| ||    
T  35729201 tcactttattccctgattttgcagctcgctgtcacataggtccttgacttaggattacatacaaataagtcactgactctgcacttccgctatcactgta 35729102  T
Q  654 gtctctgtcgttaaannnnnnngttaagtgatgatgtggc 693  Q
    ||| ||| | |||||       ||||||||||||||||||    
T  35729101 gtccctgacattaaataaatctgttaagtgatgatgtggc 35729062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 562 - 693
Target Start/End: Original strand, 42477397 - 42477527
Alignment:
Q  562 gtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgt 661  Q
    |||| ||||| ||||||||| |||| ||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| || |||     
T  42477397 gtccttgactctgcacctcgttgtcgcataggtctctgactcaggattaaatacaaataagtc-ctgactctgcacttccgttatcattttaatccctga 42477495  T
Q  662 cgttaaannnnnnngttaagtgatgatgtggc 693  Q
    |||||||       ||||||||||||||||||    
T  42477496 cgttaaaaaaatatgttaagtgatgatgtggc 42477527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 554 - 788
Target Start/End: Complemental strand, 12223814 - 12223580
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||||||||||||  ||||| ||  |||||||||| ||||||||||||||||||||| ||| ||||| ||||||||||| ||||||||| ||||||    
T  12223814 tcactttagtccctgacactgcacatcaatgtcacataggtccctgactcaggattaaatataaagaagtccctgactctgcagttccgttattacttta 12223715  T
Q  654 gtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaa 753  Q
    ||| |||  ||||||       |||||||||||||||| |||  |  ||| | ||||| |   |||||  |||||| || ||||||||||||||  ||||    
T  12223714 gtcactgatgttaaataattctgttaagtgatgatgtgacacaggttttacgatgacatgacatatgagttgtcacaggaactaaagtgaaagtaaaaaa 12223615  T
Q  754 tggccactttggtccctgaatcgaaaatcgatatc 788  Q
    | | ||||||| ||| |||| | |||||| |||||    
T  12223614 ttgtcactttgatccttgaaccaaaaatcaatatc 12223580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 554 - 654
Target Start/End: Original strand, 45583692 - 45583792
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||||||||||| | ||||  ||||| |||||||| |||||||||||| |||||||||| ||||||  |||| |||||||||||||||||||||||    
T  45583692 tcactttagtccctgattctgcagttcgctatcacataggtccctgactcagaattaaatacagataagttcctgattctgcacttccgttatcacttta 45583791  T
Q  654 g 654  Q
    |    
T  45583792 g 45583792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 586 - 668
Target Start/End: Original strand, 44529068 - 44529150
Alignment:
Q  586 cacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaa 668  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||  |||||| ||||||||||||||| ||| |||||||    
T  44529068 cacatagatccctgactcatgattaaatacaaataagtctccgactcaacacttctgttatcactttagtccctgacgttaaa 44529150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 594 - 656
Target Start/End: Complemental strand, 44530686 - 44530624
Alignment:
Q  594 tccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtc 656  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  44530686 tccccgactcaggattaaatataaataagtctctgactctgcacttccgttatcactttagtc 44530624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 573 - 691
Target Start/End: Original strand, 12220050 - 12220167
Alignment:
Q  573 tgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnn 672  Q
    ||||||||| ||||||| |||| ||||||||| ||||||||| ||| ||||||||||||||||||||| | |||||||||||||| || |||||||        
T  12220050 tgcacctcgttgtcacaaagattcctgactcaagattaaatagaaagaagtctctgactctgcacttctgatatcactttagtct-tgacgttaaataat 12220148  T
Q  673 nnngttaagtgatgatgtg 691  Q
       ||||||||||||||||    
T  12220149 tttgttaagtgatgatgtg 12220167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 424 - 509
Target Start/End: Complemental strand, 33474445 - 33474361
Alignment:
Q  424 gcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaagt 509  Q
    |||||||||||||| |||| ||||||||||||||| |||||||||  |||||| |||||||||||||||||||||||| |||||||    
T  33474445 gcattggttaagag-aacaaaaatagaaataatttgttgaaaaattatgaaaagtgttgaattcaactttctaaaagtcaaaaagt 33474361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 599 - 693
Target Start/End: Complemental strand, 45584566 - 45584472
Alignment:
Q  599 gactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaagtgatgatgtggc 693  Q
    |||||||||||||||||||||||| |  |||||||||||||||||||||||||||||| ||| |||||||       ||||||||||||||||||    
T  45584566 gactcaggattaaatacaaataagccaatgactctgcacttccgttatcactttagtccctgacgttaaaaaaatctgttaagtgatgatgtggc 45584472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 554 - 656
Target Start/End: Original strand, 39708111 - 39708213
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    ||||||||||| |||||| || ||||||| |||||| || ||| ||||||| |||| |||||||| ||||| | |||| |||||||||||||||||||||    
T  39708111 tcactttagtctctgactctgtacctcgccgtcacaaaggtccatgactcaagattgaatacaaagaagtcaccgactttgcacttccgttatcacttta 39708210  T
Q  654 gtc 656  Q
    |||    
T  39708211 gtc 39708213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 554 - 695
Target Start/End: Complemental strand, 5930247 - 5930107
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    ||||||||||| || ||| ||||| ||||| ||||| || ||||| ||||||||||||||||||  || | || |||| |||||||||||||||||||||    
T  5930247 tcactttagtctcttactttgcacttcgctatcacaaaggtccctaactcaggattaaatacaagaaattttc-gactgtgcacttccgttatcacttta 5930149  T
Q  654 gtctctgtcgttaaannnnnnngttaagtgatgatgtggcac 695  Q
    ||| ||| | |||||       ||||||||||||||||||||    
T  5930148 gtccctgccattaaataattctgttaagtgatgatgtggcac 5930107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 554 - 646
Target Start/End: Original strand, 21062825 - 21062917
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttat 646  Q
    |||||||||||||||||| ||||||||||||||| | || ||| ||||||||||||||||||| | |||||   | |||||||| ||||||||    
T  21062825 tcactttagtccctgactttgcacctcgctgtcataaaggtccttgactcaggattaaatacatagaagtcctcggctctgcacctccgttat 21062917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 701 - 773
Target Start/End: Original strand, 24287635 - 24287707
Alignment:
Q  701 ttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaa 773  Q
    |||||| |||||||||||||| ||||||| ||||||||||||||||| |||||||| | |||| |||||||||    
T  24287635 ttatgccgacaaggagtatgaggtgtcacagggactaaagtgaaagtagaaaatggtcgctttagtccctgaa 24287707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 556 - 668
Target Start/End: Complemental strand, 33607736 - 33607624
Alignment:
Q  556 actttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagt 655  Q
    ||||||||| || ||| || || ||| ||| ||| || || |||| ||||||||||||||||| |||||||||| |||||||||||||||||| |||||     
T  33607736 actttagtctctaactatgtacttcgatgttacaaaggtctctgattcaggattaaatacaaagaagtctctgattctgcacttccgttatcattttaga 33607637  T
Q  656 ctctgtcgttaaa 668  Q
    | ||| |||||||    
T  33607636 ccctgacgttaaa 33607624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 554 - 646
Target Start/End: Original strand, 34704917 - 34705009
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttat 646  Q
    ||||||||||| | |||| ||||||||| ||||||| ||  | |||||||||||||||||||||| |||||||||||| || |||| ||||||    
T  34704917 tcactttagtctccgactctgcacctcgttgtcacaaaggcctctgactcaggattaaatacaaagaagtctctgactgtgtactttcgttat 34705009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 581 - 781
Target Start/End: Complemental strand, 24288954 - 24288754
Alignment:
Q  581 gctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaa 680  Q
    ||||||||| ||||| || |||||||||||| ||||||  ||||  ||| | ||||||||| ||||||||||| |||||| ||||| |       |||||    
T  24288954 gctgtcacaaagatctctaactcaggattaattacaaagtagtccttgaatgtgcacttccattatcactttattctctggcgttatataattctgttaa 24288855  T
Q  681 gtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaa 780  Q
     |||||||||| ||   |  ||||||||||||||||||||| |||| ||  |||||||| | ||||| ||||||||  | |||| ||| |||| ||||||    
T  24288854 ctgatgatgtgacaaaggttttatgctgacaaggagtatgatgtgtgacatggactaaaataaaagtagaaaatggtaattttgatccttgaaccgaaaa 24288755  T
Q  781 t 781  Q
    |    
T  24288754 t 24288754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 602 - 762
Target Start/End: Complemental strand, 25621788 - 25621628
Alignment:
Q  602 tcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggct 701  Q
    |||||||||||||||||| ||| | ||| | |||||||| ||||||||||||||| ||| |||||||       ||||| ||||||| |||||      |    
T  25621788 tcaggattaaatacaaattagtttttgaatgtgcacttctgttatcactttagtcactgacgttaaataattttgttaactgatgatttggcaaagattt 25621689  T
Q  702 tatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactt 762  Q
    |||||| |||||| |||||| |||| ||  |||||||||||||||| |||||||| |||||    
T  25621688 tatgctcacaaggggtatgaagtgtaacaaggactaaagtgaaagtagaaaatggtcactt 25621628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 574 - 756
Target Start/End: Original strand, 27067811 - 27067992
Alignment:
Q  574 gcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnn 673  Q
    |||||||||||||| | ||||| ||||||| ||||||||  ||||  |||| |||| | ||||||| | |||||||||||||||||| | |||||         
T  27067811 gcacctcgctgtcataaagatctctgactc-ggattaaaagcaaagtagtccctgaatgtgcactttcattatcactttagtctctgacattaaataatt 27067909  T
Q  674 nngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatgg 756  Q
      | |||  | ||||||| ||  ||| |||||||||||| |||||||  ||||||| | ||||||||||||||| ||||||||    
T  27067910 atgctaacgggtgatgtgacaaatggtttatgctgacaaagagtatggtgtgtcacagagactaaagtgaaagtagaaaatgg 27067992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 574 - 756
Target Start/End: Complemental strand, 27210502 - 27210321
Alignment:
Q  574 gcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnn 673  Q
    |||||||||||||| | ||||| ||||||| ||||||||  ||||  |||| |||| | ||||||| | |||||||||||||||||| | |||||         
T  27210502 gcacctcgctgtcataaagatctctgactc-ggattaaaagcaaagtagtccctgaatgtgcactttcattatcactttagtctctgacattaaataatt 27210404  T
Q  674 nngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatgg 756  Q
      | |||  | ||||||| ||  ||| |||||||||||| |||||||  ||||||| | ||||||||||||||| ||||||||    
T  27210403 atgctaacgggtgatgtgacaaatggtttatgctgacaaagagtatggtgtgtcacagagactaaagtgaaagtagaaaatgg 27210321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 581 - 645
Target Start/End: Original strand, 10894385 - 10894449
Alignment:
Q  581 gctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgtta 645  Q
    ||||| |||||| ||||||||||| ||||||||| |||||||||||| | |||||||||||||||    
T  10894385 gctgttacataggtccctgactcaagattaaatataaataagtctctaattctgcacttccgtta 10894449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 554 - 691
Target Start/End: Complemental strand, 19434049 - 19433912
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||||||||| ||| | || |||| ||||||| || || |||| | ||||||||||| ||  ||||| | ||||| ||||||| ||||||||||||    
T  19434049 tcactttagtccctaactctccatctcgttgtcacaaaggtctctgatttaggattaaatataaggaagtcaccgactccgcacttcagttatcacttta 19433950  T
Q  654 gtctctgtcgttaaannnnnnngttaagtgatgatgtg 691  Q
    |||| || |||||||       ||||||||||||||||    
T  19433949 gtctatggcgttaaataattctgttaagtgatgatgtg 19433912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 604 - 781
Target Start/End: Original strand, 32793229 - 32793406
Alignment:
Q  604 aggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggctta 703  Q
    |||||||||||||||||||||  ||| |||||| ||| |||||||||||||||| || |||||||       ||||| ||||||||||||||  |  |||    
T  32793229 aggattaaatacaaataagtcattgattctgcatttcggttatcactttagtctttggcgttaaataattatgttaactgatgatgtggcacacgtttta 32793328  T
Q  704 tgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaat 781  Q
       ||||| |   | ||| |||||||  ||||||||||||||||  ||||||  || ||||||||||||||| |||||    
T  32793329 caatgacatgacatgtgaggtgtcacatggactaaagtgaaagtaaaaaatgatcattttggtccctgaatcaaaaat 32793406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 607 - 667
Target Start/End: Complemental strand, 43461789 - 43461730
Alignment:
Q  607 attaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaa 667  Q
    ||||||||||||||||| | ||||| |||||||||||||||||||||||||||| ||||||    
T  43461789 attaaatacaaataagttt-tgactatgcacttccgttatcactttagtctctgacgttaa 43461730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 717 - 787
Target Start/End: Original strand, 7258426 - 7258496
Alignment:
Q  717 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 787  Q
    ||||| ||||||| ||||| ||||||||||| |||||||| |||||||||||||||| | |||||| ||||    
T  7258426 tatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatat 7258496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 704 - 774
Target Start/End: Original strand, 39824287 - 39824357
Alignment:
Q  704 tgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaat 774  Q
    ||||||||||| | |||| ||||||| ||||||||||||||||| |||||||| |||||| | ||||||||    
T  39824287 tgctgacaaggtgcatgaagtgtcacagggactaaagtgaaagtagaaaatggtcactttagcccctgaat 39824357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 566 - 658
Target Start/End: Original strand, 24844593 - 24844685
Alignment:
Q  566 ctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctc 658  Q
    |||||| ||||||||||||||||  || ||| | |||||||||||||||||||  ||||  ||| | ||||||||| |||||| |||||||||    
T  24844593 ctgactctgcacctcgctgtcaccaaggtccataactcaggattaaatacaaagtagtcattgaatgtgcacttccattatcagtttagtctc 24844685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 562 - 668
Target Start/End: Complemental strand, 8879651 - 8879544
Alignment:
Q  562 gtccctgactgtgcacctcgctgtcacata-gatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctg 660  Q
    |||||||||| ||||||| ||||||| | | | | |||||||||||||||||||||||  |||  |||| | |||| ||| ||||||||||||||| |||    
T  8879651 gtccctgactctgcacctagctgtcataaaagcttcctgactcaggattaaatacaaagtagttcctgaatgtgcatttctgttatcactttagtccctg 8879552  T
Q  661 tcgttaaa 668  Q
     |||||||    
T  8879551 acgttaaa 8879544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 575 - 788
Target Start/End: Complemental strand, 7509565 - 7509353
Alignment:
Q  575 cacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnn 674  Q
    ||||||| ||||||| || ||  ||| ||| ||||||||| ||| ||||||| || |||||||||||||||| ||||||  | ||| |||||||          
T  7509565 cacctcgttgtcacaaaggtctttgattcatgattaaatataaagaagtctcagattctgcacttccgttattactttaacccctgacgttaaataattt 7509466  T
Q  675 ngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcg-aaaatggccactttggtccctgaa 773  Q
     |||||||||| |||||| || |  | || | ||||| ||| ||||| ||||||   |||||||||||||||| | ||||| | ||||||||||||| ||    
T  7509465 tgttaagtgattatgtggtacat--catacgatgacatggaatatgatgtgtcatatggactaaagtgaaagtagaaaaatagtcactttggtccctaaa 7509368  T
Q  774 tcgaaaatcgatatc 788  Q
     | |||||| |||||    
T  7509367 ccaaaaatcaatatc 7509353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 578 - 656
Target Start/End: Complemental strand, 34889014 - 34888936
Alignment:
Q  578 ctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtc 656  Q
    |||||||||||| || || || ||||| ||||||||| ||| | |||  | ||||||||||||||||||||||||||||    
T  34889014 ctcgctgtcacaaaggtctctcactcatgattaaatataaagatgtccttaactctgcacttccgttatcactttagtc 34888936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 717 - 787
Target Start/End: Original strand, 44333288 - 44333358
Alignment:
Q  717 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 787  Q
    ||||| ||||||| ||||| || |||||||| |||||||| |||||||||||||||| | |||||| ||||    
T  44333288 tatgaggtgtcacagggaccaacgtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatat 44333358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 717 - 787
Target Start/End: Complemental strand, 48788644 - 48788574
Alignment:
Q  717 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 787  Q
    ||||| |||||||  |||| ||||||||||| |||||||| |||||||||||||||| | |||||| ||||    
T  48788644 tatgaggtgtcacaaggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatat 48788574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 791 - 824
Target Start/End: Original strand, 48646368 - 48646401
Alignment:
Q  791 caacttactgttaggtccctgactgtgcatactt 824  Q
    ||||||||||||||||||||||||||||||||||    
T  48646368 caacttactgttaggtccctgactgtgcatactt 48646401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 717 - 773
Target Start/End: Original strand, 42477531 - 42477587
Alignment:
Q  717 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaa 773  Q
    ||||| ||||||| ||||| ||||||||||| |||||||  ||||||||||||||||    
T  42477531 tatgaggtgtcacagggaccaaagtgaaagtagaaaatgatcactttggtccctgaa 42477587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 766
Target Start/End: Original strand, 22621187 - 22621347
Alignment:
Q  606 gattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatg 705  Q
    ||||||||| |||  |||| |||| | |||||||| ||||||| | |||||| ||||||||||       ||||| ||||||  || ||  ||  || ||    
T  22621187 gattaaatataaagtagtccctgaatgtgcacttctgttatcagtctagtctatgtcgttaaaaacttctgttaactgatgagttgacaaatgttttttg 22621286  T
Q  706 ctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggt 766  Q
    ||||||||| | |||| |||||||  |||||||||||||||| |||||||  |||||||||    
T  22621287 ctgacaaggcgcatgatgtgtcacaaggactaaagtgaaagtagaaaatgatcactttggt 22621347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 717 - 772
Target Start/End: Original strand, 43457619 - 43457674
Alignment:
Q  717 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctga 772  Q
    ||||| ||||||| | |||||||||||||||  ||||||| |||||||||||||||    
T  43457619 tatgaggtgtcacagagactaaagtgaaagtaaaaaatggtcactttggtccctga 43457674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 718 - 788
Target Start/End: Original strand, 384991 - 385061
Alignment:
Q  718 atgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatc 788  Q
    |||| ||||||||  ||||||||||||||| |||||| | ||||||| ||  ||||||||||||| |||||    
T  384991 atgaggtgtcacgttgactaaagtgaaagtagaaaattgtcactttgatctatgaatcgaaaatcaatatc 385061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 701 - 788
Target Start/End: Original strand, 8870132 - 8870221
Alignment:
Q  701 ttatgctgacaaggagtat--gacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatc 788  Q
    |||||||||||||||||||  || |||||||   ||||||| ||||||| |||||||   |||||||||||||||   ||||||||||||    
T  8870132 ttatgctgacaaggagtatatgaggtgtcacaaagactaaaatgaaagtagaaaatgattactttggtccctgaactaaaaatcgatatc 8870221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 717 - 787
Target Start/End: Complemental strand, 10899045 - 10898975
Alignment:
Q  717 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 787  Q
    ||||| ||||||| ||||| |||| |||||| |||||||| ||||||||||| |||| | |||||| ||||    
T  10899045 tatgaggtgtcacagggaccaaagagaaagtagaaaatggtcactttggtccttgaaccaaaaatcaatat 10898975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 543 - 618
Target Start/End: Original strand, 24934799 - 24934876
Alignment:
Q  543 tttgagtaaat--tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaa 618  Q
    |||||||||||  ||||||| |||||| ||| ||||  ||||||||||| || || |||||| |||||||||||||||    
T  24934799 tttgagtaaatggtcactttggtccctaactctgcatatcgctgtcacaaaggtctctgacttaggattaaatacaaa 24934876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 790 - 824
Target Start/End: Complemental strand, 45584301 - 45584267
Alignment:
Q  790 tcaacttactgttaggtccctgactgtgcatactt 824  Q
    ||||| |||||||||||||||||||||||||||||    
T  45584301 tcaacctactgttaggtccctgactgtgcatactt 45584267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 717 - 787
Target Start/End: Complemental strand, 48647415 - 48647345
Alignment:
Q  717 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 787  Q
    ||||| |||||||  |||| ||||||||||| |||||||| |||||| ||||||||| | |||||| ||||    
T  48647415 tatgaggtgtcacaaggaccaaagtgaaagtagaaaatggtcactttcgtccctgaaccaaaaatcaatat 48647345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 723 - 788
Target Start/End: Complemental strand, 8375569 - 8375504
Alignment:
Q  723 gtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatc 788  Q
    ||||||| | ||||||||||||||| |||||||| |||||| |||||| || | |||||| |||||    
T  8375569 gtgtcacagagactaaagtgaaagtagaaaatggtcactttagtccctaaaccaaaaatcaatatc 8375504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 791 - 824
Target Start/End: Complemental strand, 10898877 - 10898844
Alignment:
Q  791 caacttactgttaggtccctgactgtgcatactt 824  Q
    |||||||||||||||||||||||| |||||||||    
T  10898877 caacttactgttaggtccctgactatgcatactt 10898844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 734 - 787
Target Start/End: Original strand, 24934965 - 24935018
Alignment:
Q  734 actaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 787  Q
    |||||||||||||| |||||||| ||||||| ||||| || |||||||| ||||    
T  24934965 actaaagtgaaagtagaaaatggtcactttgatccctaaaccgaaaatcaatat 24935018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 635 - 668
Target Start/End: Original strand, 33060899 - 33060932
Alignment:
Q  635 cacttccgttatcactttagtctctgtcgttaaa 668  Q
    |||||||||||||||||||||||||| |||||||    
T  33060899 cacttccgttatcactttagtctctgacgttaaa 33060932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 791 - 824
Target Start/End: Original strand, 42477699 - 42477732
Alignment:
Q  791 caacttactgttaggtccctgactgtgcatactt 824  Q
    ||||||| ||||||||||||||||||||||||||    
T  42477699 caacttaatgttaggtccctgactgtgcatactt 42477732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 791 - 824
Target Start/End: Original strand, 45583906 - 45583939
Alignment:
Q  791 caacttactgttaggtccctgactgtgcatactt 824  Q
    |||||||||||||||||||||||| |||||||||    
T  45583906 caacttactgttaggtccctgactatgcatactt 45583939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 791 - 824
Target Start/End: Complemental strand, 48788479 - 48788446
Alignment:
Q  791 caacttactgttaggtccctgactgtgcatactt 824  Q
    ||||||| ||||||||||||||||||||||||||    
T  48788479 caacttattgttaggtccctgactgtgcatactt 48788446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 94; Significance: 2e-45; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 554 - 787
Target Start/End: Complemental strand, 21733889 - 21733653
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcag---gattaaatacaaataagtctctgactctgcacttccgttatcact 650  Q
    ||||| |||||||||||| || || ||| ||||||| || |||||||||||    |||||||||||||||||||||||||||||||||||||| ||||||    
T  21733889 tcactctagtccctgactttgtacatcgttgtcacaaaggtccctgactcatcatgattaaatacaaataagtctctgactctgcacttccgtcatcact 21733790  T
Q  651 ttagtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcga 750  Q
    |||||   ||  ||||||       |||||||||||||||| ||| ||  ||||||||||||||||||||| ||||||||  |||||||||||||||  |    
T  21733789 ttagttgttgcagttaaaaaattctgttaagtgatgatgtgacacatgttttatgctgacaaggagtatgaagtgtcacgatgactaaagtgaaagtaaa 21733690  T
Q  751 aaatggccactttggtccctgaatcgaaaatcgatat 787  Q
    |||||| |||||||||| ||||| |||||||| ||||    
T  21733689 aaatggtcactttggtctctgaaccgaaaatcaatat 21733653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 554 - 692
Target Start/End: Complemental strand, 31091642 - 31091504
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    ||||||| |||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  31091642 tcactttggtccctgactctgcaccttgctgtcacataggtccctgactcaggattaaatacaaataagtccctgactctgcacttccgttatcacttta 31091543  T
Q  654 gtctctgtcgttaaannnnnnngttaagtgatgatgtgg 692  Q
    ||||||| |||||||       |||||||||||||||||    
T  31091542 gtctctgacgttaaaaaaatatgttaagtgatgatgtgg 31091504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 554 - 793
Target Start/End: Complemental strand, 34037788 - 34037549
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||||||| ||||| ||||||| ||||||| | || ||| | |||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  34037788 tcactttagtccttgactctgcaccttgctgtcataaaggtccataactcaggattaaatacaaataagtctatgactctgcacttctgttatcacttta 34037689  T
Q  654 gtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaa 753  Q
    ||  | | |||||||       |||||||||||||||| ||| ||  ||||||||||||||||||||| |||||||   ||||||||||| ||| |||||    
T  34037688 gttcccgccgttaaaaaattatgttaagtgatgatgtgacacatgttttatgctgacaaggagtatgaggtgtcacacagactaaagtgacagtagaaaa 34037589  T
Q  754 tggccactttggtccctgaatcgaaaatcgatatcttcaa 793  Q
    | | ||||||| | |||||| | |||||| ||||| ||||    
T  34037588 tagtcactttgattcctgaaccaaaaatcaatatcctcaa 34037549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 554 - 656
Target Start/End: Complemental strand, 32766354 - 32766252
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    ||||||| |||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  32766354 tcactttggtccctgactctgcacctcgttgtcacataggtccctgactcaggattaaatacaaataagtccctgactctgcacttccgttatcacttta 32766255  T
Q  654 gtc 656  Q
    |||    
T  32766254 gtc 32766252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 554 - 693
Target Start/End: Original strand, 2910108 - 2910247
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||||||  ||| | |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||    
T  2910108 tcactttagtctttgattttgcagctcgctgtcacatagatccctgactcgggattaaatacaaataagtctctgactctgcacttcctttgtcacttta 2910207  T
Q  654 gtctctgtcgttaaannnnnnngttaagtgatgatgtggc 693  Q
    ||| ||| |||||||       ||||||||||||||||||    
T  2910208 gtccctgacgttaaaaaaatctgttaagtgatgatgtggc 2910247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 567 - 770
Target Start/End: Complemental strand, 17466930 - 17466727
Alignment:
Q  567 tgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgtta 666  Q
    ||||| |||||||||||||||||||   | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  | |||||    
T  17466930 tgactctgcacctcgctgtcacataagccgctgactcaggattaaatacaaagaagtctctgactctgcacttccgttatcactttagtctaagacgtta 17466831  T
Q  667 aannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggt 766  Q
    ||       |||||||||||||||| ||| ||  ||| | ||||||||  ||||| |||||||  | ||||||||||||||  ||||||| || |||| |    
T  17466830 aataattctgttaagtgatgatgtgacacatgttttaggatgacaaggcatatgaggtgtcacacgcactaaagtgaaagtaaaaaatggtcaatttgat 17466731  T
Q  767 ccct 770  Q
    ||||    
T  17466730 ccct 17466727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 554 - 667
Target Start/End: Complemental strand, 40000449 - 40000336
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    ||||||| |||||||||| ||||||||||||| |||||||||||||| | |||||||||||||||||||||||| || ||||||||||||||||||||||    
T  40000449 tcactttggtccctgactctgcacctcgctgttacatagatccctgattgaggattaaatacaaataagtctctaaccctgcacttccgttatcacttta 40000350  T
Q  654 gtctctgtcgttaa 667  Q
     || ||| ||||||    
T  40000349 ttccctgacgttaa 40000336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 557 - 656
Target Start/End: Complemental strand, 17330342 - 17330243
Alignment:
Q  557 ctttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtc 656  Q
    ||||||||| ||| | |||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  17330342 ctttagtccttgattctgcagctcactgtcacataggtccctgactcaggattaaatacaaataagtctctgactctgcatttccgttatcactttagtc 17330243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 554 - 656
Target Start/End: Complemental strand, 24459561 - 24459459
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    ||||||| |||||||||| |||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||  |||||||||||    
T  24459561 tcactttggtccctgactctgcatctcgctgtcacataggtccctgaatcaggattaaatacaaataagtctctgaccctgcacttctattatcacttta 24459462  T
Q  654 gtc 656  Q
    |||    
T  24459461 gtc 24459459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 558 - 668
Target Start/End: Original strand, 31090176 - 31090286
Alignment:
Q  558 tttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtct 657  Q
    |||||||||||| | |||| ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||     
T  31090176 tttagtccctgattctgcagctcgctgtcacataggtccttgactcaggattaaatataaataagtctctgactctgcacttccgttatgattttagtcc 31090275  T
Q  658 ctgtcgttaaa 668  Q
    ||| |||||||    
T  31090276 ctgacgttaaa 31090286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 554 - 692
Target Start/End: Original strand, 39015013 - 39015151
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    ||||||| |||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||| |||| ||||||||||||| | |||||| ||||    
T  39015013 tcacttttgtccctgactctgcacctcgctgccacatagatccttgactcaggattaaatacaaatacgtctttgactctgcactttcattatcatttta 39015112  T
Q  654 gtctctgtcgttaaannnnnnngttaagtgatgatgtgg 692  Q
    || |||  |||||||       |||||||||||||||||    
T  39015113 gtttctaacgttaaaaatatttgttaagtgatgatgtgg 39015151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 554 - 668
Target Start/End: Original strand, 24458068 - 24458182
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||||||||||| | |||| |||||| |||||||| |||||||||||  ||||||||||||||||| ||||||||| ||||| |||||||||||||    
T  24458068 tcactttagtccctgattatgcagctcgctatcacataggtccctgactcaaaattaaatacaaataagtttctgactctacactttcgttatcacttta 24458167  T
Q  654 gtctctgtcgttaaa 668  Q
    ||||||  |||||||    
T  24458168 gtctctaacgttaaa 24458182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 554 - 668
Target Start/End: Original strand, 32764946 - 32765060
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||||||||||| | |||| || | ||||| |||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  32764946 tcactttagtccctgattctgcagctagttgtcatataggtctctgactcaggattaaatacaaataagtccctgactctgcacttccgttatcacttta 32765045  T
Q  654 gtctctgtcgttaaa 668  Q
     || ||| |||||||    
T  32765046 atccctgacgttaaa 32765060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 554 - 788
Target Start/End: Complemental strand, 34582785 - 34582551
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||| ||||||||||||| ||||||| ||||| ||| || ||  |||||| ||||||||||||||  |||| |||| | |||||||||||||||||||||    
T  34582785 tcacgttagtccctgactctgcaccttgctgttacaaaggtcattgactcgggattaaatacaaagtagtccctgaatgtgcacttccgttatcacttta 34582686  T
Q  654 gtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaa 753  Q
    ||| ||| |||||||        | || |||| ||||||||   |  |||||||||||||  |||||| |||||||  | |||||||| ||||| |||||    
T  34582685 gtccctgacgttaaataattatatcaactgatcatgtggcaaaggttttatgctgacaagaggtatgaggtgtcacatgaactaaagtaaaagtagaaaa 34582586  T
Q  754 tggccactttggtccctgaatcgaaaatcgatatc 788  Q
    || ||||||| ||||||||||  |||||| |||||    
T  34582585 tgtccactttagtccctgaataaaaaatcaatatc 34582551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 588 - 668
Target Start/End: Original strand, 14704048 - 14704128
Alignment:
Q  588 catagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaa 668  Q
    ||||| ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||| |||||||    
T  14704048 cataggtccctgactcaggattaaatacaaataagtccctcactctgcacttccgttatcactttagtccctgacgttaaa 14704128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 543 - 793
Target Start/End: Complemental strand, 14887626 - 14887374
Alignment:
Q  543 tttgagtaaat--tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttc 640  Q
    |||||||||||  ||||||| |||||  ||| ||||||||||||||||  || ||||||||||||||||||| | |||  |  | |||| | |||| |||    
T  14887626 tttgagtaaatggtcactttggtcccaaactctgcacctcgctgtcacgaaggtccctgactcaggattaaacataaagtataccctgaatgtgcaattc 14887527  T
Q  641 cgttatcactttagtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaag 740  Q
    | |  |||||||| |||||  |||||||       ||||| |||||||||| ||  ||  ||||||| ||||||||||||| ||||||| ||||||||||    
T  14887526 catcgtcactttaatctctagcgttaaataattttgttaactgatgatgtgacaaatgttttatgctaacaaggagtatgaggtgtcacagggactaaag 14887427  T
Q  741 tgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatcttcaa 793  Q
    ||||||| |||||||| || | ||||||||||||  |||||| ||||| ||||    
T  14887426 tgaaagtagaaaatggtcaatatggtccctgaattaaaaatcaatatcctcaa 14887374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 554 - 668
Target Start/End: Complemental strand, 39016496 - 39016384
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccct--gactcaggattaaatacaaataagtctctgactctgcacttccgttatcactt 651  Q
    ||||||||||| |||| | |||| |||||||||||||| ||| ||  ||||||||||||||||||||||||||    |||||||||||||||||||||||    
T  39016496 tcactttagtctctgattctgcagctcgctgtcacatacatctctctgactcaggattaaatacaaataagtc----actctgcacttccgttatcactt 39016401  T
Q  652 tagtctctgtcgttaaa 668  Q
    ||||||||| |||||||    
T  39016400 tagtctctgacgttaaa 39016384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 582 - 667
Target Start/End: Original strand, 7073675 - 7073760
Alignment:
Q  582 ctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaa 667  Q
    ||||| ||||| || |||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||    
T  7073675 ctgtcgcataggtctctgattcgggattaaatacaaataagtctctgattctgcacttccgttatcactttagtccctgacgttaa 7073760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 554 - 649
Target Start/End: Complemental strand, 5915107 - 5915012
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcac 649  Q
    |||||||||||| ||||| ||||||||||| ||| |||| ||  |||||||| |||||||||||| ||||| || |||||||||||||||||||||    
T  5915107 tcactttagtccatgactctgcacctcgctttcaaataggtctttgactcagaattaaatacaaagaagtcactaactctgcacttccgttatcac 5915012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 438 - 509
Target Start/End: Original strand, 7888572 - 7888643
Alignment:
Q  438 gaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaagt 509  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| || ||| ||||||| |||||||    
T  7888572 gaacataaatagaaataatttcttgaaaaatggtgaaaagtgttgaatttaattttataaaagtaaaaaagt 7888643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 576 - 770
Target Start/End: Original strand, 7412122 - 7412316
Alignment:
Q  576 acctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnn 675  Q
    |||||| ||||||||||||| |||||||| ||||||||| ||| ||||| ||||   |||||||||||||||||||||||| ||  | |||||           
T  7412122 acctcgttgtcacatagatctctgactcaagattaaatataaagaagtcactgatagtgcacttccgttatcactttagtccctaacattaaataattat 7412221  T
Q  676 gttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccct 770  Q
    ||||||||||||  || ||| ||  ||| | ||||| ||  ||||| |||||||  |||||||||||||| | |||||||| ||||||| |||||    
T  7412222 gttaagtgatgacatgacacatgttttacgatgacatggcatatgatgtgtcacaaggactaaagtgaaaatagaaaatggtcactttgttccct 7412316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 555 - 656
Target Start/End: Complemental strand, 38985103 - 38985002
Alignment:
Q  555 cactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttag 654  Q
    |||||||| |||| ||| |||||||| |||||||| ||||   |||||| | |||||||||||| |||||  ||||||||||||||||||||||||||||    
T  38985103 cactttagcccctaactttgcacctcactgtcacaaagatttatgactcggaattaaatacaaagaagtccttgactctgcacttccgttatcactttag 38985004  T
Q  655 tc 656  Q
    ||    
T  38985003 tc 38985002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 425 - 501
Target Start/End: Complemental strand, 10824334 - 10824259
Alignment:
Q  425 cattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagt 501  Q
    ||||||||||||| |||||||||| ||||||||| ||| ||| ||||||||||||||||||| ||||||||||||||    
T  10824334 cattggttaagag-aacataaataaaaataatttgttggaaagtggtgaaaaatgttgaatttaactttctaaaagt 10824259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 554 - 782
Target Start/End: Original strand, 38853763 - 38853991
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    ||||||| |||||||||| | ||| ||  ||||| | || || ||||||||||||||||||||||  |||| || | | |||||||||||||||| ||||    
T  38853763 tcactttggtccctgactctacacttcattgtcataaaggtctctgactcaggattaaatacaaagtagtccctaaatgtgcacttccgttatcaattta 38853862  T
Q  654 gtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaa 753  Q
    ||| ||| |||||||       ||||| | |||| ||| ||   |  ||||||| ||||||||||||| ||||||| ||||||||| ||||||| || ||    
T  38853863 gtcactgacgttaaataattatgttaactcatgacgtgacaaaagttttatgctaacaaggagtatgaggtgtcacagggactaaattgaaagtagataa 38853962  T
Q  754 tggccactttggtccctgaatcgaaaatc 782  Q
    | | | | ||||||| |||| ||||||||    
T  38853963 tagtcgccttggtccttgaaccgaaaatc 38853991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 635 - 781
Target Start/End: Original strand, 26585167 - 26585310
Alignment:
Q  635 cacttccgttatcactttagtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacgggga 734  Q
    |||||| ||||||||||||||||||  |||||||       ||||| |||||||||| ||  |   ||||| ||||||||||||||| ||||||| ||||    
T  26585167 cacttctgttatcactttagtctctagcgttaaataattatgttaattgatgatgtgacatatt--ttatgttgacaaggagtatgaggtgtcacaggga 26585264  T
Q  735 ctaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaat 781  Q
    ||||||||||| | | |||||| |||||||||||||||| |||||||    
T  26585265 ctaaagtgaaaatag-aaatggtcactttggtccctgaaccgaaaat 26585310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 540 - 755
Target Start/End: Complemental strand, 12746332 - 12746115
Alignment:
Q  540 tagtttgagtaaat--tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcac 637  Q
    ||||||||||||||  ||||||| || | ||||| |||||||||| |||  | || | |||||||||||||||||||||||  |||  |||| | ||| |    
T  12746332 tagtttgagtaaatggtcactttggttcttgactctgcacctcgcagtcttaaaggttcctgactcaggattaaatacaaagtagttcctgaatgtgccc 12746233  T
Q  638 ttccgttatcactttagtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggacta 737  Q
    |||||||||||||||||||  |   ||||||         |||||||| ||||| ||   |  |||||||||||| |||||||| ||||||| |||||||    
T  12746232 ttccgttatcactttagtccataatgttaaataattctagtaagtgattatgtgacaaaagttttatgctgacaaagagtatgaggtgtcacagggacta 12746133  T
Q  738 aagtgaaagtcgaaaatg 755  Q
    |||||||||| |||||||    
T  12746132 aagtgaaagtagaaaatg 12746115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 407 - 499
Target Start/End: Original strand, 803889 - 803980
Alignment:
Q  407 taaagagtgtcctttgtgcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaa 499  Q
    ||||||||| | || | |||||||||||||| |||||||||| ||||||||| ||||||| ||||||||| | |||||||||| |||||||||    
T  803889 taaagagtgccattggagcattggttaagag-aacataaataaaaataatttgttgaaaagtggtgaaaagtattgaattcaaatttctaaaa 803980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 598 - 690
Target Start/End: Original strand, 17466093 - 17466185
Alignment:
Q  598 tgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaagtgatgatgt 690  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||| ||||||||||| ||| ||| |||       |||||||||||||||    
T  17466093 tgactcaggattaaatacaaagatatctctgactctgcacttccgttttcactttagtccctgacgtgaaacaattatgttaagtgatgatgt 17466185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 573 - 655
Target Start/End: Complemental strand, 2911587 - 2911505
Alignment:
Q  573 tgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagt 655  Q
    |||| ||||||||||||||   || |||||||   ||||||| |||||||||||||||| |||||||||||||||||||||||    
T  2911587 tgcagctcgctgtcacataaggccatgactcaaagttaaatataaataagtctctgactttgcacttccgttatcactttagt 2911505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 577 - 720
Target Start/End: Complemental strand, 15442063 - 15441920
Alignment:
Q  577 cctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnng 676  Q
    ||||||||||||| |||| |||||||||||||||||||||||  ||||  ||| | |||||||   |||||||||||||||||   ||||||       |    
T  15442063 cctcgctgtcacaaagattcctgactcaggattaaatacaaagtagtccttgaatgtgcacttttattatcactttagtctctagtgttaaataattttg 15441964  T
Q  677 ttaagtgatgatgtggcacttggcttatgctgacaaggagtatg 720  Q
    |||| |||||||||||||  ||  |||||||||||| |||||||    
T  15441963 ttaactgatgatgtggcaaatgttttatgctgacaaagagtatg 15441920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 717 - 793
Target Start/End: Original strand, 24458211 - 24458287
Alignment:
Q  717 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatcttcaa 793  Q
    ||||| ||||||| ||||| ||||||||||| |||||||| ||||||||||||| |||| |||||| ||||| ||||    
T  24458211 tatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctcaatcaaaaatcaatatcctcaa 24458287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 597 - 668
Target Start/End: Complemental strand, 26586367 - 26586296
Alignment:
Q  597 ctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaa 668  Q
    |||||||| ||||||||| |||  ||||| ||| | |||||||||||||||||||||||||||| |||||||    
T  26586367 ctgactcaagattaaatataaagtagtctttgaatgtgcacttccgttatcactttagtctctggcgttaaa 26586296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 597 - 656
Target Start/End: Complemental strand, 31814416 - 31814357
Alignment:
Q  597 ctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtc 656  Q
    ||||||||| |||||||| ||| |||| | ||||||||||||||||||||||||||||||    
T  31814416 ctgactcagaattaaatataaagaagtttttgactctgcacttccgttatcactttagtc 31814357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 565 - 655
Target Start/End: Original strand, 21732131 - 21732216
Alignment:
Q  565 cctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagt 655  Q
    ||||||| ||||||||| | ||||| || |||  |||||||||||||||||||||||||   |||||||| ||||||||||| ||||||||    
T  21732131 cctgactttgcacctcgttatcacaaaggtcc--gactcaggattaaatacaaataagt---tgactctgtacttccgttattactttagt 21732216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 566 - 654
Target Start/End: Original strand, 5914324 - 5914412
Alignment:
Q  566 ctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttag 654  Q
    |||||| ||||||||| ||| | |||| || ||||||||  |||||||||||| |||||  ||||| |||||| |||||||||||||||    
T  5914324 ctgactttgcacctcgttgtgatataggtctctgactcacaattaaatacaaagaagtcagtgactttgcactcccgttatcactttag 5914412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 701 - 773
Target Start/End: Complemental strand, 18676791 - 18676719
Alignment:
Q  701 ttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaa 773  Q
    |||||| ||||||||||||||  |||||  | |||||||| |||||| |||||||| ||||||||||||||||    
T  18676791 ttatgccgacaaggagtatgaaatgtcaaagagactaaagcgaaagtagaaaatggtcactttggtccctgaa 18676719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 725 - 773
Target Start/End: Original strand, 21732274 - 21732322
Alignment:
Q  725 gtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaa 773  Q
    ||||| ||||||||||||||||| |||||||| ||||||||||||||||    
T  21732274 gtcaccgggactaaagtgaaagtagaaaatggtcactttggtccctgaa 21732322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 717 - 788
Target Start/End: Complemental strand, 17330191 - 17330120
Alignment:
Q  717 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatc 788  Q
    ||||| ||||||| | |||||||||||||||  ||||||| |||||||||||||||| | |||||| |||||    
T  17330191 tatgaggtgtcacagagactaaagtgaaagtaaaaaatggtcactttggtccctgaacccaaaatcaatatc 17330120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 717 - 788
Target Start/End: Original strand, 32765088 - 32765159
Alignment:
Q  717 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatc 788  Q
    ||||| ||||||  ||||||||||||||||| |||||||| | |||||||||||||| | |||||| |||||    
T  32765088 tatgaggtgtcatagggactaaagtgaaagtagaaaatggtcgctttggtccctgaaccaaaaatcaatatc 32765159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 717 - 788
Target Start/End: Original strand, 43380738 - 43380809
Alignment:
Q  717 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatc 788  Q
    ||||| |||||||  | |||||||||||||| |||||||| |||||||||||||||| | |||||| |||||    
T  43380738 tatgaggtgtcacatgaactaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatc 43380809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 463 - 509
Target Start/End: Complemental strand, 445648 - 445602
Alignment:
Q  463 aaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaagt 509  Q
    |||||||||||||| ||||||||||||||| |||||||| |||||||    
T  445648 aaaaatggtgaaaagtgttgaattcaacttcctaaaagtcaaaaagt 445602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 554 - 656
Target Start/End: Original strand, 8420021 - 8420123
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    ||||||| |||||||||| ||||  |||| |||||| |  ||||||| ||| |||||||||||||  |||| |||| | |||||||| ||||||| ||||    
T  8420021 tcactttggtccctgactctgcatttcgcggtcacaaatgtccctgagtcaagattaaatacaaagtagtccctgaatgtgcacttctgttatcagttta 8420120  T
Q  654 gtc 656  Q
    |||    
T  8420121 gtc 8420123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 578 - 656
Target Start/End: Original strand, 33161799 - 33161877
Alignment:
Q  578 ctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtc 656  Q
    |||| ||||||| || || ||| || |||||||||| |||| ||||||| |||| || |||||||||||||||||||||    
T  33161799 ctcgttgtcacaaaggtctctgccttaggattaaatgcaaagaagtctcagactatgtacttccgttatcactttagtc 33161877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 633 - 788
Target Start/End: Original strand, 37607189 - 37607344
Alignment:
Q  633 tgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggg 732  Q
    |||||||||||||||||||||||| ||| ||||| |       ||||| |||||| ||| ||   |  ||||||| ||||| |||||||  ||||||  |    
T  37607189 tgcacttccgttatcactttagtccctgacgttatataattatgttaactgatgacgtgacaaaggttttatgctaacaagaagtatgagatgtcacaag 37607288  T
Q  733 gactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatc 788  Q
    |||||||||||| || |||||| | |||||||||| ||||| | |||||| |||||    
T  37607289 gactaaagtgaacgtagaaaatagtcactttggtctctgaaccaaaaatcaatatc 37607344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 701 - 782
Target Start/End: Original strand, 38854944 - 38855025
Alignment:
Q  701 ttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatc 782  Q
    ||||||| ||||||||||||| ||||||| ||| ||||| ||||||| || ||| | ||| ||||||| |||| ||||||||    
T  38854944 ttatgctaacaaggagtatgaggtgtcacaggggctaaattgaaagtagataatagtcaccttggtccttgaaccgaaaatc 38855025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 425 - 509
Target Start/End: Original strand, 6975837 - 6975919
Alignment:
Q  425 cattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaagt 509  Q
    |||||| |||||| |||| ||||| ||||||| | ||||||  |||||||||||||||||||||||| |||| ||||| ||||||    
T  6975837 cattggctaagag-aacaaaaataaaaataatatgttgaaag-tggtgaaaaatgttgaattcaactctctagaagtttaaaagt 6975919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 732 - 788
Target Start/End: Original strand, 31442517 - 31442573
Alignment:
Q  732 ggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatc 788  Q
    ||||||||||||||||| ||||||  ||| |||||||||||| |||||||| |||||    
T  31442517 ggactaaagtgaaagtcaaaaatgaacacattggtccctgaaccgaaaatcaatatc 31442573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 554 - 665
Target Start/End: Complemental strand, 33163574 - 33163462
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataa-gtctctgactctgcacttccgttatcacttt 652  Q
    |||||||||||  ||||| | |||| || |||| || || || ||||||||  |||||||||||| || || | ||||| |||| |||||||||||||||    
T  33163574 tcactttagtctttgactctacaccacgttgtcgcaaagttctctgactcataattaaatacaaaaaaagtatttgactatgcatttccgttatcacttt 33163475  T
Q  653 agtctctgtcgtt 665  Q
    |||||||| ||||    
T  33163474 agtctctgacgtt 33163462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 717 - 788
Target Start/End: Original strand, 14704156 - 14704227
Alignment:
Q  717 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatc 788  Q
    ||||| ||||||| ||||| ||||||||||| |||||| | ||||||||||| |||| | |||||| |||||    
T  14704156 tatgaggtgtcacagggaccaaagtgaaagtagaaaatagtcactttggtccatgaaccaaaaatcaatatc 14704227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 726 - 773
Target Start/End: Original strand, 31090317 - 31090364
Alignment:
Q  726 tcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaa 773  Q
    |||| ||||| ||||||||||| |||||||||| ||||||||||||||    
T  31090317 tcacagggaccaaagtgaaagtagaaaatggccgctttggtccctgaa 31090364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 718 - 789
Target Start/End: Complemental strand, 31443196 - 31443125
Alignment:
Q  718 atgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatct 789  Q
    |||| ||||||| | ||||||||||||||| |||||| | || |||||| |||||| |||||||| ||||||    
T  31443196 atgaggtgtcacagtgactaaagtgaaagtagaaaattgtcattttggttcctgaaccgaaaatcaatatct 31443125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 717 - 787
Target Start/End: Complemental strand, 24459426 - 24459356
Alignment:
Q  717 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 787  Q
    ||||| ||||||  ||||| ||||||||||| |||||||| ||||||| |||||||| | |||||| ||||    
T  24459426 tatgaggtgtcatagggaccaaagtgaaagtagaaaatggtcactttgatccctgaaccaaaaatcaatat 24459356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 460 - 506
Target Start/End: Complemental strand, 33726451 - 33726405
Alignment:
Q  460 ttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaa 506  Q
    |||||||||||||||||||  | |||| |||||||||||||||||||    
T  33726451 ttgaaaaatggtgaaaaataataaatttaactttctaaaagttaaaa 33726405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 717 - 787
Target Start/End: Original strand, 39015156 - 39015226
Alignment:
Q  717 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 787  Q
    ||||| ||||||| ||||| ||||||||||| |||||||| || |||||||| |||| | |||||| ||||    
T  39015156 tatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcagtttggtccttgaaccaaaaatcaatat 39015226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 717 - 787
Target Start/End: Complemental strand, 39016355 - 39016285
Alignment:
Q  717 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 787  Q
    ||||| |||||||  |||| ||||||||||| |||||| | |||||||||||||||| | |||||| ||||    
T  39016355 tatgaggtgtcacatggaccaaagtgaaagtagaaaattgtcactttggtccctgaaccaaaaatcaatat 39016285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 461 - 506
Target Start/End: Complemental strand, 2239652 - 2239607
Alignment:
Q  461 tgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaa 506  Q
    ||||||||||| ||||||| |||||| |||||| ||||||||||||    
T  2239652 tgaaaaatggtaaaaaatgatgaatttaactttttaaaagttaaaa 2239607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 791 - 824
Target Start/End: Original strand, 2910420 - 2910453
Alignment:
Q  791 caacttactgttaggtccctgactgtgcatactt 824  Q
    |||| |||||||||||||||||||||||||||||    
T  2910420 caacctactgttaggtccctgactgtgcatactt 2910453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 791 - 824
Target Start/End: Complemental strand, 2911291 - 2911258
Alignment:
Q  791 caacttactgttaggtccctgactgtgcatactt 824  Q
    ||||||||||||||||| ||||||||||||||||    
T  2911291 caacttactgttaggtctctgactgtgcatactt 2911258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 575 - 656
Target Start/End: Original strand, 11985720 - 11985801
Alignment:
Q  575 cacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtc 656  Q
    ||||||||||| | | || || ||||||||||||||||||||||  |||||||||   |||| || |||||||| |||||||    
T  11985720 cacctcgctgttataaaggtctctgactcaggattaaatacaaagtagtctctgaaggtgcattttcgttatcagtttagtc 11985801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 791 - 824
Target Start/End: Original strand, 32765257 - 32765290
Alignment:
Q  791 caacttactgttaggtccctgactgtgcatactt 824  Q
    |||| |||||||||||||||||||||||||||||    
T  32765257 caacctactgttaggtccctgactgtgcatactt 32765290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 3e-44; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 554 - 754
Target Start/End: Original strand, 3671047 - 3671246
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||| ||| ||||| |||||||| || ||||| || || ||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||    
T  3671047 tcacttta-tccttgactttgcacctctctatcacaaaggtctctgactcagaattaaatacaaataagtctatgactctccacttccgttatcacttta 3671145  T
Q  654 gtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaa 753  Q
     || ||| |||||||       |||||||||||||||| ||| ||  |||||||||||||| ||||||| |||||||||||||||||||||||| |||||    
T  3671146 atccctgccgttaaaaaattatgttaagtgatgatgtgacacatgttttatgctgacaaggggtatgacatgtcacggggactaaagtgaaagtagaaaa 3671245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 554 - 668
Target Start/End: Original strand, 17700526 - 17700640
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||||||  ||||| ||||||||| |||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17700526 tcactttagtctttgactctgcacctcgttgtcacataggttcctgactcaggattaaatacaaataagtccctgactctgcacttccgttatcacttta 17700625  T
Q  654 gtctctgtcgttaaa 668  Q
    ||| ||| |||||||    
T  17700626 gtccctgacgttaaa 17700640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 554 - 656
Target Start/End: Original strand, 48572993 - 48573095
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    ||||||| |||||||||| ||||||||| | |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  48572993 tcactttggtccctgactctgcacctcgttatcacataggtccctgactcaggattaaatacaaataagcctctgactctgcacttccgttatcacttta 48573092  T
Q  654 gtc 656  Q
    |||    
T  48573093 gtc 48573095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 554 - 668
Target Start/End: Complemental strand, 17702034 - 17701920
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    ||||||||||| |||| | |||| |||||||||| |||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17702034 tcactttagtctctgattctgcagctcgctgtcatataggtccctgactcaagattaaatacaaataagtccctgactctgcacttccgttatcacttta 17701935  T
Q  654 gtctctgtcgttaaa 668  Q
    ||| ||| |||||||    
T  17701934 gtccctgacgttaaa 17701920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 554 - 668
Target Start/End: Original strand, 36278960 - 36279074
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||||||||||| | | || |||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  36278960 tcactttagtccctgattatacagctcgttgtcacataggtccctgattcaggattaaatacaaataagtctctgactctgcacttccgttatcatttta 36279059  T
Q  654 gtctctgtcgttaaa 668  Q
    ||| ||| |||||||    
T  36279060 gtccctgacgttaaa 36279074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 554 - 668
Target Start/End: Complemental strand, 52318432 - 52318318
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    ||||||| ||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||| ||||||    
T  52318432 tcactttggtctctgactctgcacttcgctgtcacatagatccctgactcaggattaaatacaaataagtccctgactctgcacttctgatattacttta 52318333  T
Q  654 gtctctgtcgttaaa 668  Q
    ||| ||| |||||||    
T  52318332 gtccctgacgttaaa 52318318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 578 - 667
Target Start/End: Complemental strand, 11773142 - 11773053
Alignment:
Q  578 ctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaa 667  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||    
T  11773142 ctcgctgtcacataggtccctgactcaggattaaatacaaataagtctctgactctacacttccgttatcactttagtccctggcgttaa 11773053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 554 - 691
Target Start/End: Original strand, 55388081 - 55388218
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||||||||||| | |||| |||||||||| |||| || |||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||    
T  55388081 tcactttagtccctgattctgcagctcgctgtcatataggtctctgactcaggattaaatacaaataagttactgactctgcactcccgttatcacttta 55388180  T
Q  654 gtctctgtcgttaaannnnnnngttaagtgatgatgtg 691  Q
    ||| ||| |||||||       ||||||||||||||||    
T  55388181 gtccctgacgttaaaaaaatttgttaagtgatgatgtg 55388218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 554 - 710
Target Start/End: Original strand, 50753825 - 50753981
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    ||||||||||||||  || |||||||||||||||||||| ||||| | ||||||||||||| ||| |||| ||||||||| |||||| ||||||||||||    
T  50753825 tcactttagtccctagctctgcacctcgctgtcacataggtccctaattcaggattaaatataaacaagtttctgactctacacttctgttatcacttta 50753924  T
Q  654 gtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgac 710  Q
    ||| ||| |||||||       |||||||||||||||||||| || ||||| |||||    
T  50753925 gtccctgccgttaaaaaaatctgttaagtgatgatgtggcacatgtcttatactgac 50753981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 554 - 656
Target Start/End: Original strand, 2591635 - 2591737
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||||||||||| | |||| || |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||||    
T  2591635 tcactttagtccctgattctgcagcttgctgtcacataggtccctgactcaggattaaatacaaacaagtctctgactctgcacttccatgatcacttta 2591734  T
Q  654 gtc 656  Q
    |||    
T  2591735 gtc 2591737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 554 - 656
Target Start/End: Complemental strand, 45601053 - 45600952
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||||||||||||| ||  |||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  45601053 tcactttagtccctgactctgtccctcgctgtcacataggtccctgattcaggattaaatacaaagaagtc-ctgactctgcacttccgttatcacttta 45600955  T
Q  654 gtc 656  Q
    |||    
T  45600954 gtc 45600952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 554 - 668
Target Start/End: Complemental strand, 47118166 - 47118052
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||||||||||||| ||||||||| ||||| |||  |||| ||||||||||||||| |||| |||||||||||||||||||| |||||||||||||    
T  47118166 tcactttagtccctgactctgcacctcgttgtcatataagtccccgactcaggattaaatgcaaagaagtctctgactctgcactttcgttatcacttta 47118067  T
Q  654 gtctctgtcgttaaa 668  Q
    ||| ||| |||||||    
T  47118066 gtccctgacgttaaa 47118052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 578 - 788
Target Start/End: Complemental strand, 36827566 - 36827356
Alignment:
Q  578 ctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngt 677  Q
    |||||||| ||| |||||| ||||||||||||||||| |||  | ||||||| | | ||||||||||||||||||||||||||  ||||||       ||    
T  36827566 ctcgctgtgacaaagatccttgactcaggattaaatataaaataatctctgaatgtacacttccgttatcactttagtctctgatgttaaataattttgt 36827467  T
Q  678 taagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcga 777  Q
    |||||||||||||| ||  ||  ||||||||| ||||||  ||| || |||| ||||||||||||||| | |||||||   | |||||||||||||||||    
T  36827466 taagtgatgatgtgacaaatgttttatgctgagaaggagcgtgaagtatcacagggactaaagtgaaaatagaaaatgattattttggtccctgaatcga 36827367  T
Q  778 aaatcgatatc 788  Q
    ||||| |||||    
T  36827366 aaatcaatatc 36827356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 555 - 788
Target Start/End: Original strand, 20464078 - 20464311
Alignment:
Q  555 cactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttag 654  Q
    |||||||||||| |||| ||||||||| ||||||| || |||||| |||| ||||||||||||| ||||| ||||||||||||||| |||||||||||||    
T  20464078 cactttagtccccgactctgcacctcgttgtcacaaaggtccctggctcatgattaaatacaaagaagtccctgactctgcacttctgttatcactttag 20464177  T
Q  655 tctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaat 754  Q
    ||   | |||||||       |||||||||||||||| ||| ||  ||| | | ||| |   || || || |||| | ||||||| ||||||| ||||||    
T  20464178 tccacgacgttaaataactctgttaagtgatgatgtgacacatgttttacgataacatgacatacgaggtatcacagagactaaaatgaaagtagaaaat 20464277  T
Q  755 ggccactttggtccctgaatcgaaaatcgatatc 788  Q
    || ||||||||||| |||||| |||||| |||||    
T  20464278 ggtcactttggtccatgaatcaaaaatcaatatc 20464311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 585 - 693
Target Start/End: Complemental strand, 36280401 - 36280293
Alignment:
Q  585 tcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaagtga 684  Q
    |||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||       |||||||||    
T  36280401 tcacataggtctctgactcaggattaaatataaataagtctctgactctgcacttccgttatcactttagtccctgacgttaaaaaaatatgttaagtga 36280302  T
Q  685 tgatgtggc 693  Q
    |||||||||    
T  36280301 tgatgtggc 36280293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 554 - 656
Target Start/End: Complemental strand, 2592122 - 2592020
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||||||||| | | |||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||   ||||||||||||||||||    
T  2592122 tcactttagtccctaattctgcagctcgctgtcacataggtccctgactcaggattaaatacaaataagtccctgactcaatacttccgttatcacttta 2592023  T
Q  654 gtc 656  Q
    |||    
T  2592022 gtc 2592020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 554 - 668
Target Start/End: Original strand, 19114541 - 19114655
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||||||||||||| ||||| ||| ||||||| || ||||||||||| ||||||||||||| ||||| || ||| |||||||||||||||||||||    
T  19114541 tcactttagtccctgactctgcacttcgttgtcacagaggtccctgactcaagattaaatacaaagaagtcactaactttgcacttccgttatcacttta 19114640  T
Q  654 gtctctgtcgttaaa 668  Q
    ||||||  |||||||    
T  19114641 gtctcttacgttaaa 19114655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 407 - 519
Target Start/End: Complemental strand, 21814312 - 21814202
Alignment:
Q  407 taaagagtgtcctttgtgcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaa 506  Q
    ||||||||||| |||| |||||||||||||  |||||||||||||||||||| ||||||| ||||||||| |||||||||||| ||||||||||| ||||    
T  21814312 taaagagtgtc-tttgggcattggttaagat-aacataaatagaaataatttgttgaaaagtggtgaaaagtgttgaattcaattttctaaaagtcaaaa 21814215  T
Q  507 agtaataatttcc 519  Q
    ||| |||||||||    
T  21814214 agttataatttcc 21814202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 554 - 653
Target Start/End: Original strand, 34263813 - 34263912
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    ||||||| | |||||||| ||||||||||||||||| || ||| ||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  34263813 tcactttggcccctgactctgcacctcgctgtcacagaggtccttgattcaggattaaatacaaataagtctctgactctacacttccattatcacttta 34263912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 554 - 656
Target Start/End: Complemental strand, 33428550 - 33428448
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    ||||||| |||||||||| ||||||||| |||||||||| |||||||||||| |||||||||||| |||||  |||||||||| ||||||| ||||||||    
T  33428550 tcactttcgtccctgactctgcacctcgttgtcacataggtccctgactcagaattaaatacaaagaagtccttgactctgcatttccgttgtcacttta 33428451  T
Q  654 gtc 656  Q
    |||    
T  33428450 gtc 33428448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 582 - 693
Target Start/End: Complemental strand, 53959187 - 53959076
Alignment:
Q  582 ctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaag 681  Q
    ||||||||||| || |||||||| ||||||||||||||||||   |||||||||||||||||||||||||||||||||| |||||||       ||||||    
T  53959187 ctgtcacataggtctctgactcatgattaaatacaaataagttcatgactctgcacttccgttatcactttagtctctgacgttaaaaaaatttgttaag 53959088  T
Q  682 tgatgatgtggc 693  Q
    ||||||||||||    
T  53959087 tgatgatgtggc 53959076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 407 - 507
Target Start/End: Original strand, 15502622 - 15502721
Alignment:
Q  407 taaagagtgtcctttgtgcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaa 506  Q
    ||||||||||||||    ||||||||||||| |||| ||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||    
T  15502622 taaagagtgtccttgagacattggttaagag-aacaaaaatagaaataatttgttgaaaaatggtaaaaaatgttgaattcaactttttaaaagttaaaa 15502720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 554 - 668
Target Start/End: Complemental strand, 47075466 - 47075352
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||| ||| ||||| ||||||||| |||||||||| ||| | ||||| ||||||||||||| ||  | |||||||| |||||||||||||||||||    
T  47075466 tcactttaatccttgactctgcacctcgttgtcacataggtccgtcactcaagattaaatacaaagaaacccctgactctacacttccgttatcacttta 47075367  T
Q  654 gtctctgtcgttaaa 668  Q
    ||||||| |||||||    
T  47075366 gtctctgacgttaaa 47075352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 554 - 656
Target Start/End: Complemental strand, 55389584 - 55389482
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    ||||||| |||||| ||| |||||||||||||||||||| ||  |||||||  ||||||||||| |||||| |||||||| |||||||||||||||||||    
T  55389584 tcactttggtccctaactctgcacctcgctgtcacataggtcattgactcaaaattaaatacaattaagtccctgactctacacttccgttatcacttta 55389485  T
Q  654 gtc 656  Q
    |||    
T  55389484 gtc 55389482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 554 - 692
Target Start/End: Original strand, 52316987 - 52317125
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    ||||||||||| |||| | |||| |||||||||| |||| || |||||||| |||||||||||||||||||| | ||||||||| |||||||||| ||||    
T  52316987 tcactttagtctctgattctgcagctcgctgtcatataggtctctgactcatgattaaatacaaataagtctttaactctgcacctccgttatcatttta 52317086  T
Q  654 gtctctgtcgttaaannnnnnngttaagtgatgatgtgg 692  Q
    |||  || |||||||       |||||||||||||||||    
T  52317087 gtccatgacgttaaaaaaatctgttaagtgatgatgtgg 52317125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 407 - 506
Target Start/End: Complemental strand, 41999005 - 41998907
Alignment:
Q  407 taaagagtgtcctttgtgcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaa 506  Q
    ||||||||| |||| |  ||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| ||||||||||| ||||||| ||||    
T  41999005 taaagagtgcccttgggacattggttaagag-aacataaatagaaataatttgttgaaaaatggtgaaaagtgttaaattcaactttataaaagtaaaaa 41998907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 425 - 503
Target Start/End: Complemental strand, 1165861 - 1165784
Alignment:
Q  425 cattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagtta 503  Q
    ||||||||| ||| |||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||    
T  1165861 cattggttatgag-aacataaatagaaataatttgttgaaaagtgatgaaaaatgttgaattcaactttctaaaagtta 1165784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 594 - 656
Target Start/End: Complemental strand, 48574534 - 48574472
Alignment:
Q  594 tccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtc 656  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  48574534 tccctgactcaggattaaatacaaataagtccctgactctgcactttcgttatcactttagtc 48574472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 583 - 667
Target Start/End: Complemental strand, 49261620 - 49261539
Alignment:
Q  583 tgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaa 667  Q
    |||||||||| |||||||||||||||||||||||||   |||||| |||||||| ||||||||||||||||||||||| ||||||    
T  49261620 tgtcacataggtccctgactcaggattaaatacaaa---gtctctaactctgcatttccgttatcactttagtctctgacgttaa 49261539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 677 - 774
Target Start/End: Complemental strand, 3694132 - 3694035
Alignment:
Q  677 ttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaat 774  Q
    ||||||||||||||| ||| ||  ||||||||||||||||||||| |||| |||| |||||||||||||||  ||||||| ||||||| |||||||||    
T  3694132 ttaagtgatgatgtgtcacatgttttatgctgacaaggagtatgatgtgtaacggagactaaagtgaaagtacaaaatggtcactttgatccctgaat 3694035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 560 - 656
Target Start/End: Original strand, 48808380 - 48808476
Alignment:
Q  560 tagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtc 656  Q
    |||||||||| | |||| |||||||| | |||| || |||||||||||||||||||||||||||  || |||||||||||||||| |||||||||||    
T  48808380 tagtccctgattctgcagctcgctgttagataggtctctgactcaggattaaatacaaataagttcctaactctgcacttccgttgtcactttagtc 48808476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 425 - 507
Target Start/End: Complemental strand, 15005911 - 15005830
Alignment:
Q  425 cattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaa 507  Q
    ||||||||||||| |||||||| ||||||||||| | |||||||||| |||| |||||||||||||||| |||||||||||||    
T  15005911 cattggttaagag-aacataaacagaaataatttatggaaaaatggtaaaaagtgttgaattcaactttgtaaaagttaaaaa 15005830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 554 - 656
Target Start/End: Complemental strand, 19115261 - 19115160
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||||| | ||||| ||||||||| |||||||||| ||| | ||||||||||||||||||| |||||  |||||||||||||||||| | ||||||    
T  19115261 tcactttagttcgtgactctgcacctcgatgtcacataggtccttcactcaggattaaatacaaagaagtc-atgactctgcacttccgtttttacttta 19115163  T
Q  654 gtc 656  Q
    |||    
T  19115162 gtc 19115160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 422 - 519
Target Start/End: Complemental strand, 3084107 - 3084012
Alignment:
Q  422 gtgcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaagtaataatttcc 519  Q
    |||||||||||||||| |||||||||||| ||||||| |||||||||||| |||| |||||| || |||||||||||| |||||||||  ||||||||    
T  3084107 gtgcattggttaagag-aacataaatagatataatttgttgaaaaatggtaaaaagtgttgagtttaactttctaaaa-ttaaaaagttgtaatttcc 3084012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 407 - 506
Target Start/End: Original strand, 34060751 - 34060850
Alignment:
Q  407 taaagagtgtcctttgtgcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaa 506  Q
    |||||||||||||| ||||||||||||||| ||  | ||||| ||||| | | ||||||||||||||||| || |||||| |||||| ||||||||||||    
T  34060751 taaagagtgtccttggtgcattggttaagaagataaaaaataaaaatattgtattgaaaaatggtgaaaagtgatgaatttaactttttaaaagttaaaa 34060850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 555 - 621
Target Start/End: Original strand, 19331117 - 19331183
Alignment:
Q  555 cactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataa 621  Q
    |||||| || ||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  19331117 cactttcgttcctgactctgcaccttgctgtcacataggtccctgactcaggattaaatacaaataa 19331183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 554 - 641
Target Start/End: Original strand, 53957683 - 53957769
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttcc 641  Q
    |||||||||| | ||| | |||| |||||||| |||||| | ||||||||||||| |||||||||||||||| |||||||||||||||    
T  53957683 tcactttagtacttgattctgcaactcgctgttacataggttcctgactcaggat-aaatacaaataagtctatgactctgcacttcc 53957769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 571 - 645
Target Start/End: Original strand, 47427885 - 47427959
Alignment:
Q  571 tgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgtta 645  Q
    |||||||||||||||||||||| ||| |||||||  |||||||||||| ||||| |||||| ||||||| |||||    
T  47427885 tgtgcacctcgctgtcacataggtccttgactcaaaattaaatacaaagaagtccctgactgtgcacttacgtta 47427959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 717 - 787
Target Start/End: Complemental strand, 55389441 - 55389371
Alignment:
Q  717 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 787  Q
    ||||| ||||||| ||||| ||||||||||| |||||||| |||||||||||||||| |||||||| ||||    
T  55389441 tatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccgaaaatcaatat 55389371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 558 - 782
Target Start/End: Original strand, 40205893 - 40206118
Alignment:
Q  558 tttagtccctgactgtgcacctcgctgtcacatagatccct-gactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtc 656  Q
    ||||||||| |||| || | |||||||||| | || || || |||||| ||||||| |||||  ||||||||| | |||||||||||||||| |||||||    
T  40205893 tttagtcccggactctgtagctcgctgtcataaaggtctcttgactcacgattaaaaacaaagtagtctctgaatgtgcacttccgttatcagtttagtc 40205992  T
Q  657 tctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatgg 756  Q
      || |||||||       ||||| | |||| ||||||  ||  || ||||||||||| |  |||  ||||||  || |||||||||||||  |||||||    
T  40205993 attggcgttaaaaaattatgttaactaatgaggtggcaaatgttttgtgctgacaaggtgcgtgagttgtcacaagggctaaagtgaaagtataaaatgg 40206092  T
Q  757 ccactttggtccctgaatcgaaaatc 782  Q
     ||||||||||| |||| ||||||||    
T  40206093 tcactttggtccttgaaccgaaaatc 40206118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 554 - 657
Target Start/End: Complemental strand, 47428672 - 47428575
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||| ||||||||| |||||||| ||||||||||| ||| ||||||| ||||      ||| |||||  ||||||||||||||||||||||||| |    
T  47428672 tcactttaatccctgactttgcacctctctgtcacataggtccgtgactcaagatt------aaagaagtcattgactctgcacttccgttatcacttca 47428579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 718 - 788
Target Start/End: Original strand, 55388211 - 55388281
Alignment:
Q  718 atgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatc 788  Q
    |||| ||||||| ||||| ||||||||||| |||||||| |||||||||||||||| | |||||| |||||    
T  55388211 atgatgtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatc 55388281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 717 - 789
Target Start/End: Original strand, 2591776 - 2591848
Alignment:
Q  717 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatct 789  Q
    ||||| |||||||  ||||||||||||||||  ||||| |||||||||||||||||| | |||||| ||||||    
T  2591776 tatgaggtgtcacatggactaaagtgaaagtaaaaaattgccactttggtccctgaagcaaaaatcaatatct 2591848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 717 - 773
Target Start/End: Original strand, 17700670 - 17700726
Alignment:
Q  717 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaa 773  Q
    ||||| ||||||| ||||| ||||||||||| |||||||| ||||||||||||||||    
T  17700670 tatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaa 17700726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 717 - 773
Target Start/End: Original strand, 36279103 - 36279159
Alignment:
Q  717 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaa 773  Q
    ||||| ||||||| ||||| ||||||||||| |||||||| ||||||||||||||||    
T  36279103 tatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaa 36279159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 425 - 507
Target Start/End: Original strand, 21195283 - 21195364
Alignment:
Q  425 cattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaa 507  Q
    |||||||||| ||||||| |||||||||||  || ||| ||| || |||||| || ||||||||||||| |||||||||||||    
T  21195283 cattggttaa-aggaacaaaaatagaaatatcttgttggaaagtgatgaaaagtggtgaattcaactttttaaaagttaaaaa 21195364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 585 - 655
Target Start/End: Original strand, 33427791 - 33427860
Alignment:
Q  585 tcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagt 655  Q
    |||||||| ||| ||| |||||||||||||||||| |  | |||||||||||||| |||||||||||||||    
T  33427791 tcacataggtccttgattcaggattaaatacaaattaacc-ctgactctgcactttcgttatcactttagt 33427860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 717 - 787
Target Start/End: Original strand, 48808523 - 48808593
Alignment:
Q  717 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 787  Q
    ||||| ||||||| | ||| ||||||||||| |||||||| |||||||||||||||| | |||||| ||||    
T  48808523 tatgaggtgtcacagagaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatat 48808593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 723 - 788
Target Start/End: Original strand, 19114670 - 19114735
Alignment:
Q  723 gtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatc 788  Q
    |||||||  |||||||||||||||| |||||||| ||||||  |||||||||| |||||| |||||    
T  19114670 gtgtcacaaggactaaagtgaaagtagaaaatggtcactttaatccctgaatcaaaaatcaatatc 19114735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 583 - 668
Target Start/End: Original strand, 39497244 - 39497329
Alignment:
Q  583 tgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaa 668  Q
    ||||||| || ||| |||||||||||||||||||||  |||   ||| | ||||||| |||||||| |||| ||||||||||||||    
T  39497244 tgtcacaaaggtccatgactcaggattaaatacaaaatagttattgaatgtgcactttcgttatcagtttaatctctgtcgttaaa 39497329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 437 - 504
Target Start/End: Original strand, 54143822 - 54143889
Alignment:
Q  437 ggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaa 504  Q
    |||||| |||||||||||  || ||||||| || ||||||||| | ||||||||||| ||||||||||    
T  54143822 ggaacaaaaatagaaatatcttattgaaaagtgatgaaaaatggtaaattcaactttttaaaagttaa 54143889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 448 - 502
Target Start/End: Original strand, 22455369 - 22455423
Alignment:
Q  448 agaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagtt 502  Q
    ||||||||| | || |||| ||||||||||| || ||||||||||||||||||||    
T  22455369 agaaataatgtattaaaaagtggtgaaaaatattaaattcaactttctaaaagtt 22455423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 717 - 787
Target Start/End: Original strand, 48573136 - 48573206
Alignment:
Q  717 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 787  Q
    ||||| ||||||| ||||| ||||||||||| |||||||| ||||||| ||| |||| | |||||| ||||    
T  48573136 tatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttgatccatgaaccaaaaatcaatat 48573206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 626 - 656
Target Start/End: Complemental strand, 48809697 - 48809667
Alignment:
Q  626 ctgactctgcacttccgttatcactttagtc 656  Q
    |||||||||||||||||||||||||||||||    
T  48809697 ctgactctgcacttccgttatcactttagtc 48809667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 791 - 824
Target Start/End: Original strand, 17700838 - 17700871
Alignment:
Q  791 caacttactgttaggtccctgactgtgcatactt 824  Q
    |||||||||||||||||||||||||| |||||||    
T  17700838 caacttactgttaggtccctgactgtacatactt 17700871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 791 - 824
Target Start/End: Complemental strand, 17701731 - 17701698
Alignment:
Q  791 caacttactgttaggtccctgactgtgcatactt 824  Q
    |||| |||||||||||||||||||||||||||||    
T  17701731 caacctactgttaggtccctgactgtgcatactt 17701698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 509
Target Start/End: Complemental strand, 28954302 - 28954253
Alignment:
Q  460 ttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaagt 509  Q
    |||| |||||||| ||| |||||||||||||| |||||||||| ||||||    
T  28954302 ttgataaatggtggaaagtgttgaattcaactgtctaaaagtttaaaagt 28954253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 791 - 824
Target Start/End: Original strand, 36279264 - 36279297
Alignment:
Q  791 caacttactgttaggtccctgactgtgcatactt 824  Q
    |||| |||||||||||||||||||||||||||||    
T  36279264 caacctactgttaggtccctgactgtgcatactt 36279297  T

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Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 791 - 824
Target Start/End: Original strand, 48573307 - 48573340
Alignment:
Q  791 caacttactgttaggtccctgactgtgcatactt 824  Q
    |||||||||||||||||||||||||| |||||||    
T  48573307 caacttactgttaggtccctgactgtacatactt 48573340  T

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Target: chr8 (Bit Score: 90; Significance: 5e-43; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 573 - 824
Target Start/End: Complemental strand, 41754891 - 41754651
Alignment:
Q  573 tgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnn 672  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||  |||||||| |||||||||||| ||||||| | ||| |||||||        
T  41754891 tgcacctcgctgtcacatagatctctgactcaggattaaatacaaacaagttcctgactctacacttccgttattactttagcc-ctgccgttaaaaaaa 41754793  T
Q  673 nnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctga 772  Q
       |||||||||||||||||||| |         ||||||||||||||| ||||||| |||| ||||||||||||  ||||||| ||||||||||| |||    
T  41754792 ct-gttaagtgatgatgtggcacgt---------tgacaaggagtatgatgtgtcacagggattaaagtgaaagtaaaaaatggtcactttggtccatga 41754703  T
Q  773 atcgaaaatcgatatcttcaacttactgttaggtccctgactgtgcatactt 824  Q
    |||||||||| |||||  ||| |||||||||| |||| |||| || ||||||    
T  41754702 atcgaaaatcaatatcaacaatttactgttagatccccgactatgtatactt 41754651  T

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Target: chr8; HSP #2
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 554 - 693
Target Start/End: Complemental strand, 32898560 - 32898421
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||||||||||||| |||| ||| ||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  32898560 tcactttagtccctgactctgcaactcactgtcacataggtccctgacttaggattaaatacaaataagtccctgactctgcacttccgttatcacttta 32898461  T
Q  654 gtctctgtcgttaaannnnnnngttaagtgatgatgtggc 693  Q
    ||| ||| |||||||       ||||||||||||||||||    
T  32898460 gtccctgacgttaaaaaaatctgttaagtgatgatgtggc 32898421  T

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Target: chr8; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 602 - 787
Target Start/End: Original strand, 45476218 - 45476403
Alignment:
Q  602 tcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggct 701  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||       |||||||||||||||||| | ||  |    
T  45476218 tcagaattaaatacaaataagtctctgactctgcacttctgttatcactttagtctctcccgttaaaaaaatctgttaagtgatgatgtggcgcatgtgt 45476317  T
Q  702 tatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 787  Q
    ||||||||| |||| || || ||||||| | ||| ||||||||||| |||||| | |||||||||||||||| | |||||| ||||    
T  45476318 tatgctgacgaggattaagaggtgtcacagagaccaaagtgaaagtagaaaattgtcactttggtccctgaaccaaaaatcaatat 45476403  T

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Target: chr8; HSP #4
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 558 - 693
Target Start/End: Original strand, 35177407 - 35177542
Alignment:
Q  558 tttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtct 657  Q
    |||||||||| | | |||| ||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||     
T  35177407 tttagtccctaattctgcagctcgctgtcacataggtccctgactccggattaaatacaaataagtccctgactctgcacttccgttatcactttagtcc 35177506  T
Q  658 ctgtcgttaaannnnnnngttaagtgatgatgtggc 693  Q
    ||| |||||||       ||||||||||||||||||    
T  35177507 ctgacgttaaaataatctgttaagtgatgatgtggc 35177542  T

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Target: chr8; HSP #5
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 554 - 668
Target Start/End: Complemental strand, 35178919 - 35178805
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    ||||||| |||||||||| ||||| ||||||||| || | ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  35178919 tcactttggtccctgactctgcacatcgctgtcatattggtccctgactcaggattaaatacaaataagtccctgattctgcacttccgttatcacttta 35178820  T
Q  654 gtctctgtcgttaaa 668  Q
    ||| ||| |||||||    
T  35178819 gtccctgacgttaaa 35178805  T

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Target: chr8; HSP #6
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 616 - 787
Target Start/End: Complemental strand, 45476616 - 45476445
Alignment:
Q  616 aaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaagga 715  Q
    ||||||||| |||||||||||||||  ||||||||||||||||||||||||||       |||||||||||||||||| | || |||||||||||||| |    
T  45476616 aaataagtcgctgactctgcacttctcttatcactttagtctctgtcgttaaaaaaatatgttaagtgatgatgtggcgcatgtcttatgctgacaagaa 45476517  T
Q  716 gtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 787  Q
    |||||| ||||||   |||| ||||| ||||| |||||||| |||||| ||||||||| | |||||| ||||    
T  45476516 gtatgatgtgtcatatggaccaaagtaaaagtagaaaatggtcactttagtccctgaaccaaaaatcaatat 45476445  T

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Target: chr8; HSP #7
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 556 - 772
Target Start/End: Original strand, 31074004 - 31074220
Alignment:
Q  556 actttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagt 655  Q
    |||||| ||||||||| |||| || ||||||||| |  || ||||||| ||||||||| ||||  ||| ||||| | |||||||| ||||||||||||||    
T  31074004 actttaatccctgactctgcatcttgctgtcacaaaagtctctgactctggattaaatgcaaagtagtttctgaatgtgcacttctgttatcactttagt 31074103  T
Q  656 ctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatg 755  Q
    |||||   |||||       ||||| |||||||||||||  ||  ||||||| |||||| |||||| ||||||||||||||||||||||| | |||||||    
T  31074104 ctctggaattaaataattttgttaactgatgatgtggcaaatgttttatgctaacaaggggtatgaggtgtcacggggactaaagtgaaaatagaaaatg 31074203  T
Q  756 gccactttggtccctga 772  Q
      |||||||||||||||    
T  31074204 atcactttggtccctga 31074220  T

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Target: chr8; HSP #8
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 705 - 824
Target Start/End: Original strand, 41754127 - 41754246
Alignment:
Q  705 gctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatcttcaacttactgttag 804  Q
    ||||||||||||||||||||||||  |||||||||||||||||  ||||| | ||||||||||||||||||||||||| ||||| |||| ||||||||||    
T  41754127 gctgacaaggagtatgacgtgtcatagggactaaagtgaaagtaaaaaatagtcactttggtccctgaatcgaaaatcaatatcctcaatttactgttag 41754226  T
Q  805 gtccctgactgtgcatactt 824  Q
     | |||||||||| ||||||    
T  41754227 atacctgactgtgtatactt 41754246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 554 - 693
Target Start/End: Complemental strand, 1953084 - 1952946
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||||||||||| | |||| |||| ||||| ||||||| |||||| ||||||| |||||||||||||| |||||||| ||||||||||||||||||    
T  1953084 tcactttagtccctgattctgcagctcgttgtcatatagatctctgact-aggattacatacaaataagtctatgactctgtacttccgttatcacttta 1952986  T
Q  654 gtctctgtcgttaaannnnnnngttaagtgatgatgtggc 693  Q
    ||||||| |||||||       ||||||||||||||||||    
T  1952985 gtctctgacgttaaataaatctgttaagtgatgatgtggc 1952946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 575 - 668
Target Start/End: Complemental strand, 5965536 - 5965443
Alignment:
Q  575 cacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaa 668  Q
    ||||||| ||||||| |  ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||    
T  5965536 cacctcgttgtcacaaatgtccctgactcaggattaaatacaaagaagtctttgactctgcacttccgttatcactttagtctctgacgttaaa 5965443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 554 - 788
Target Start/End: Complemental strand, 5738138 - 5737904
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||||| ||||||| ||||  ||| ||| |||||| ||| ||||||| ||||||||||||| ||||   |||||||| |||||||||||||||| |    
T  5738138 tcactttagttcctgactttgcatatcgttgtgacataggtccatgactcaagattaaatacaaagaagttattgactctgtacttccgttatcacttca 5738039  T
Q  654 gtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaa 753  Q
    |||| || |||||||       |||||||||||||||  ||| |||  |||| ||||| |   ||||| |||||||  |||||||||| |||||  ||||    
T  5738038 gtctttggcgttaaataattctgttaagtgatgatgtaacacatggtatatgatgacatgacatatgaggtgtcacatggactaaagtaaaagtaaaaaa 5737939  T
Q  754 tggccactttggtccctgaatcgaaaatcgatatc 788  Q
    ||| |||||||||| || |||| |||||| |||||    
T  5737938 tggtcactttggtctctaaatcaaaaatcaatatc 5737904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 557 - 781
Target Start/End: Original strand, 33314872 - 33315093
Alignment:
Q  557 ctttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtc 656  Q
    |||| |||||| ||| |||||||||||||| || || || |||||||| |||||||||||||||||||   || |||  ||||| ||||||||||||||     
T  33314872 ctttggtcccttactttgcacctcgctgtctcaaaggtctctgactcaagattaaatacaaataagtcatcgattctatacttcggttatcactttagtt 33314971  T
Q  657 tctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatgg 756  Q
     ||||   ||||       |||||||||||| ||| ||| ||  || |||||||||||||||||| |||||||  |||| ||||||||||| |||||| |    
T  33314972 gctgt---taaaaaattctgttaagtgatgaagtgacacatgttttttgctgacaaggagtatgaggtgtcacatggaccaaagtgaaagtagaaaatag 33315068  T
Q  757 ccactttggtccctgaatcgaaaat 781  Q
     ||||||||||| ||||| ||||||    
T  33315069 tcactttggtccgtgaattgaaaat 33315093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 425 - 518
Target Start/End: Complemental strand, 43819643 - 43819551
Alignment:
Q  425 cattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaagtaataatttc 518  Q
    ||||||||||||| ||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||  |||||||    
T  43819643 cattggttaagag-aacatgaatagaaataatttgttgaaaaatgatgaaaaatgttgaattcaactttctaaaagtcaaaaagttgtaatttc 43819551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 427 - 545
Target Start/End: Complemental strand, 7207310 - 7207194
Alignment:
Q  427 ttggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaagtaataatttccgggtgca 526  Q
    ||||||||||| |||||||||| ||||||||| |||||||||| |||||| |||||||||||| |||||||||||||||||||  ||| ||||   ||||    
T  7207310 ttggttaagag-aacataaatataaataatttgttgaaaaatgatgaaaagtgttgaattcaaatttctaaaagttaaaaagttgtaa-ttcccaatgca 7207213  T
Q  527 aaattattacttttagttt 545  Q
    |||||| ||||||||||||    
T  7207212 aaattactacttttagttt 7207194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 407 - 509
Target Start/End: Complemental strand, 24067074 - 24066973
Alignment:
Q  407 taaagagtgtcctttgtgcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaa 506  Q
    |||||||||||||| | ||||| |||||||  |||||||||| ||||||||| |||  |||||||||||| ||||||||||||| |||||||||||||||    
T  24067074 taaagagtgtccttggggcatttgttaagaa-aacataaatataaataatttgttgggaaatggtgaaaagtgttgaattcaaccttctaaaagttaaaa 24066976  T
Q  507 agt 509  Q
    |||    
T  24066975 agt 24066973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 554 - 768
Target Start/End: Original strand, 30134574 - 30134788
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||||||| | ||| ||||||||||||||||| || ||||  ||||| ||||||||||||| |||| | |||||||||||||| ||||||||||||    
T  30134574 tcactttagtccttaactctgcacctcgctgtcacaaaggtcccctactcatgattaaatacaaagaagtgtgtgactctgcacttctgttatcacttta 30134673  T
Q  654 gtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaa 753  Q
     | |||  ||||| |       |||| ||||||||||| ||| ||  ||| | ||||| |   | ||| ||||||| | ||||||||||||||| |||||    
T  30134674 atatctaacgttatataattatgttaggtgatgatgtgacacatgttttacgatgacatgtcatttgatgtgtcacagagactaaagtgaaagtagaaaa 30134773  T
Q  754 tggccactttggtcc 768  Q
    | | |||||||||||    
T  30134774 ttgtcactttggtcc 30134788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 554 - 645
Target Start/End: Original strand, 41754006 - 41754097
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgtta 645  Q
    |||||||||||||||  | ||||||| |||||||||||| ||||||||||||||||||||| ||| ||||| |||||||| ||||| |||||    
T  41754006 tcactttagtccctggttctgcaccttgctgtcacataggtccctgactcaggattaaatataaacaagtccctgactctacactttcgtta 41754097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 598 - 788
Target Start/End: Original strand, 28524810 - 28525000
Alignment:
Q  598 tgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaagtgatgatgtggcactt 697  Q
    |||||||||||||||||||||  | ||  ||| | |||||||||||||||| ||||||||||| |||||||       ||||| |||||||||||||       
T  28524810 tgactcaggattaaatacaaagtaatccttgaatgtgcacttccgttatcattttagtctctgacgttaaataattttgttaactgatgatgtggcaaag 28524909  T
Q  698 ggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatc 788  Q
       ||||| |||||| |||||||| ||||||   ||||||||||||||||  ||||| | || |||||||| |||| |||||||| |||||    
T  28524910 attttatgttgacaaagagtatgaagtgtcagatggactaaagtgaaagtaaaaaattgtcattttggtccgtgaaccgaaaatcaatatc 28525000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 554 - 691
Target Start/End: Complemental strand, 10407699 - 10407562
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    ||||||||||| |||| | |||| ||| ||||||||||| ||  ||||| ||||||||| |||||||||||  | ||| |||||||||||||||||||||    
T  10407699 tcactttagtctctgattctgcagctcactgtcacataggtcattgacttaggattaaacacaaataagtccataactttgcacttccgttatcacttta 10407600  T
Q  654 gtctctgtcgttaaannnnnnngttaagtgatgatgtg 691  Q
    ||  ||| |||||||       ||||||||||||||||    
T  10407599 gttcctgacgttaaaaaaatctgttaagtgatgatgtg 10407562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 407 - 501
Target Start/End: Complemental strand, 617617 - 617525
Alignment:
Q  407 taaagagtgtcctttgtgcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagt 501  Q
    |||||||||||||| |  |||| |||||||| |||||||||| ||||||||| || ||||||||||| ||||||| |||||||||||||||||||    
T  617617 taaagagtgtccttggaacattcgttaagag-aacataaataaaaataatttgttaaaaaatggtgagaaatgtt-aattcaactttctaaaagt 617525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 407 - 501
Target Start/End: Complemental strand, 624010 - 623918
Alignment:
Q  407 taaagagtgtcctttgtgcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagt 501  Q
    |||||||||||||| |  |||| |||||||| |||||||||| ||||||||| || ||||||||||| ||||||| |||||||||||||||||||    
T  624010 taaagagtgtccttggaacattcgttaagag-aacataaataaaaataatttgttaaaaaatggtgagaaatgtt-aattcaactttctaaaagt 623918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 585 - 775
Target Start/End: Original strand, 28619028 - 28619219
Alignment:
Q  585 tcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaagtga 684  Q
    ||||| || |||||||| || ||||||||||||| || ||  ||||||||||||| |||||||||||||||||| | |||||||       |||||||||    
T  28619028 tcacaaaggtccctgacccatgattaaatacaaagaaatcattgactctgcactttcgttatcactttagtctcggccgttaaataattttgttaagtga 28619127  T
Q  685 tgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcg-aaaatggccactttggtccctgaatc 775  Q
    ||||||| ||| ||  ||| | ||||| ||  | ||| || |||  |||||||||||||| || | ||||||| ||||||||||||| ||||    
T  28619128 tgatgtgtcacatgttttacgatgacatggcatttgatgtatcatagggactaaagtgaatgtagaaaaatggtcactttggtccctcaatc 28619219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 407 - 509
Target Start/End: Complemental strand, 42543095 - 42542994
Alignment:
Q  407 taaagagtgtcctttgtgcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaa 506  Q
    ||||||||| |||| | ||||||||||| | ||||||||||| ||| ||||| || |||||| ||||||| |||||||||||||| ||||||||| ||||    
T  42543095 taaagagtgcccttggggcattggttaa-atgaacataaataaaaacaatttgtttaaaaatagtgaaaagtgttgaattcaactctctaaaagtaaaaa 42542997  T
Q  507 agt 509  Q
    |||    
T  42542996 agt 42542994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 594 - 660
Target Start/End: Complemental strand, 28619620 - 28619554
Alignment:
Q  594 tccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctg 660  Q
    ||||||||||||||||||||||||| | |||  ||||||||||||||  ||||||||||||||||||    
T  28619620 tccctgactcaggattaaatacaaagaggtcattgactctgcacttctattatcactttagtctctg 28619554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 573 - 649
Target Start/End: Original strand, 1951970 - 1952045
Alignment:
Q  573 tgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcac 649  Q
    ||||||| ||| | |||||||||| |||||||||||||||||||||||||| |||||||||||| || | |||||||    
T  1951970 tgcaccttgctattacatagatcc-tgactcaggattaaatacaaataagtttctgactctgcattttcattatcac 1952045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 578 - 780
Target Start/End: Original strand, 24198966 - 24199164
Alignment:
Q  578 ctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngt 677  Q
    |||||||||||| || ||  ||| |||||||||||||||||  | ||  ||| | ||||||||||||||||||||||||| | ||||| ||       ||    
T  24198966 ctcgctgtcacaaaggtctttgattcaggattaaatacaaagtaatcattgaatgtgcacttccgttatcactttagtctttttcgttgaataattatgt 24199065  T
Q  678 taagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcga 777  Q
    |    ||||| || |||  ||  |||||||||||||| |||||| ||||||| |  ||||||||||||||  ||||||  || |||||||||||||||||    
T  24199066 t----gatgacgtagcaaatgttttatgctgacaaggggtatgaggtgtcacagatactaaagtgaaagtaaaaaatgatcattttggtccctgaatcga 24199161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 407 - 494
Target Start/End: Original strand, 589913 - 589998
Alignment:
Q  407 taaagagtgtcctttgtgcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttc 494  Q
    |||||||||||||| |  |||| |||||||| |||||||||| ||||||||| || ||||||||||| ||||||| ||||||||||||    
T  589913 taaagagtgtccttggaacattcgttaagag-aacataaataaaaataatttgttaaaaaatggtgagaaatgtt-aattcaactttc 589998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 583 - 691
Target Start/End: Original strand, 5736879 - 5736987
Alignment:
Q  583 tgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaagt 682  Q
    ||||||||| ||| |||| |||| |||||||||||| || ||||| ||||| ||||| |||||||||||||||| ||  |||||||       |||||||    
T  5736879 tgtcacataaatctctgattcagaattaaatacaaagaaatctctaactctacactttcgttatcactttagtccctcacgttaaataattttgttaagt 5736978  T
Q  683 gatgatgtg 691  Q
    |||||||||    
T  5736979 gatgatgtg 5736987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 594 - 782
Target Start/End: Complemental strand, 12637833 - 12637648
Alignment:
Q  594 tccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaagtgatgatgtggc 693  Q
    ||||| |||||||||| ||||||||  |||  |||| | |||||||||||||||||||||||| | | | |||||        | || ||||||||||||    
T  12637833 tccctaactcaggattgaatacaaagtagttcctgaatgtgcacttccgttatcactttagtccccgacattaaatattt---tcaactgatgatgtggc 12637737  T
Q  694 acttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatc 782  Q
    |   |  |||| || ||||||||||||| |||||||  |||||||||||||||| ||| |||  ||||||||||||||||  |||||||    
T  12637736 aaaggttttatactaacaaggagtatgatgtgtcacatggactaaagtgaaagtagaatatgatcactttggtccctgaactgaaaatc 12637648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 764 - 814
Target Start/End: Complemental strand, 41754639 - 41754589
Alignment:
Q  764 ggtccctgaatcgaaaatcgatatcttcaacttactgttaggtccctgact 814  Q
    ||||||||||||||||||| ||||| |||||||||| ||||||||||||||    
T  41754639 ggtccctgaatcgaaaatcaatatcctcaacttacttttaggtccctgact 41754589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 566 - 788
Target Start/End: Complemental strand, 31075392 - 31075172
Alignment:
Q  566 ctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgtt 665  Q
    |||||| ||||||||| ||| ||| || | | || ||||| ||||||||||||  |||| |||| | || ||| ||||||||||||||||| ||| ||||    
T  31075392 ctgactctgcacctcgttgttacaaaggttcttggctcagcattaaatacaaaatagtc-ctgaatatgtactcccgttatcactttagtcactgacgtt 31075294  T
Q  666 aaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttgg 765  Q
    |||        |||| |||||| ||| ||   |  ||||| |||||||||||| || |||||||  |||||||| ||||||| |||| ||| ||||||||    
T  31075293 aaataattatattaactgatgacgtgacaaaggttttatggtgacaaggagtacgaggtgtcacaaggactaaa-tgaaagtagaaagtggtcactttgg 31075195  T
Q  766 tccctgaatcgaaaatcgatatc 788  Q
    ||||||||  ||||||| |||||    
T  31075194 tccctgaactgaaaatcaatatc 31075172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 701 - 781
Target Start/End: Complemental strand, 9626429 - 9626349
Alignment:
Q  701 ttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaat 781  Q
    |||||||||||| |||||||| |||||||  | |||||||||||||| |||| || |||||||  |||||||| |||||||    
T  9626429 ttatgctgacaaagagtatgaggtgtcacatgaactaaagtgaaagtagaaattgaccactttaatccctgaaccgaaaat 9626349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 562 - 618
Target Start/End: Original strand, 28005359 - 28005415
Alignment:
Q  562 gtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaa 618  Q
    |||||||||| | ||||||| ||||||| |||||||||||||||||| |||||||||    
T  28005359 gtccctgactctacacctcgttgtcacaaagatccctgactcaggatcaaatacaaa 28005415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 562 - 618
Target Start/End: Original strand, 28062662 - 28062718
Alignment:
Q  562 gtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaa 618  Q
    |||||||||| | ||||||| ||||||| |||||||||||||||||| |||||||||    
T  28062662 gtccctgactctacacctcgttgtcacaaagatccctgactcaggatcaaatacaaa 28062718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 717 - 793
Target Start/End: Complemental strand, 32898417 - 32898341
Alignment:
Q  717 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatcttcaa 793  Q
    ||||| |||||||  |||| ||||||||||| |||||||| |||||||||||||||| | |||||| ||||| ||||    
T  32898417 tatgaggtgtcacaaggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatcctcaa 32898341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 609 - 693
Target Start/End: Original strand, 10406269 - 10406353
Alignment:
Q  609 taaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaagtgatgatgtggc 693  Q
    |||||| ||| |||||||||||||||||||||  |||||||||||||| |||  ||||||       ||||||||||||||||||    
T  10406269 taaataaaaacaagtctctgactctgcacttctattatcactttagtccctggtgttaaaaaaatctgttaagtgatgatgtggc 10406353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 701 - 764
Target Start/End: Complemental strand, 39138632 - 39138569
Alignment:
Q  701 ttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttg 764  Q
    |||||||||||| | |||||| |||||||  |||||||||||||||| |||||||| |||||||    
T  39138632 ttatgctgacaaagtgtatgaggtgtcacaaggactaaagtgaaagtagaaaatggtcactttg 39138569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 717 - 787
Target Start/End: Complemental strand, 1952942 - 1952872
Alignment:
Q  717 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 787  Q
    ||||| ||||||  ||||| ||||||||||| |||||||| |||||||||||||||| | |||||| ||||    
T  1952942 tatgaggtgtcatagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatat 1952872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 12221068 - 12221022
Alignment:
Q  471 tgaaaaatgttgaattcaactttctaaaagttaaaaagtaataattt 517  Q
    ||||||||||||||||||||||| |||||||| |||||| |||||||    
T  12221068 tgaaaaatgttgaattcaactttttaaaagtttaaaagttataattt 12221022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 597 - 651
Target Start/End: Original strand, 41121160 - 41121214
Alignment:
Q  597 ctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactt 651  Q
    |||||||| ||||||||||||| |||||||||||| ||||||||  |||||||||    
T  41121160 ctgactcatgattaaatacaaagaagtctctgactatgcacttctattatcactt 41121214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 544 - 618
Target Start/End: Original strand, 59548 - 59624
Alignment:
Q  544 ttgagtaaat--tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaa 618  Q
    ||||||||||  |||||||||||||||||| | |||||||||||||| |   ||||||||||||||| || ||||||    
T  59548 ttgagtaaatagtcactttagtccctgactttacacctcgctgtcactttagtccctgactcaggataaactacaaa 59624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 407 - 507
Target Start/End: Original strand, 27737704 - 27737803
Alignment:
Q  407 taaagagtgtcctttgtgcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaa 506  Q
    ||||||||||| || |  |||| |||||||| ||||||| |||||||||| | || ||||||  | |||| ||||||||| |||||||||||||| ||||    
T  27737704 taaagagtgtctttggaacattagttaagag-aacataattagaaataatatgttaaaaaataattaaaagtgttgaatttaactttctaaaagtcaaaa 27737802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 701 - 773
Target Start/End: Complemental strand, 28006564 - 28006492
Alignment:
Q  701 ttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaa 773  Q
    ||||||||||| ||||||||| || ||||  |||||||||||||| | |||| ||| |||||||||| |||||    
T  28006564 ttatgctgacagggagtatgatgtatcacaaggactaaagtgaaaatagaaagtggtcactttggtcactgaa 28006492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 701 - 773
Target Start/End: Complemental strand, 28063867 - 28063795
Alignment:
Q  701 ttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaa 773  Q
    ||||||||||| ||||||||| || ||||  |||||||||||||| | |||| ||| |||||||||| |||||    
T  28063867 ttatgctgacagggagtatgatgtatcacaaggactaaagtgaaaatagaaagtggtcactttggtcactgaa 28063795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 468 - 507
Target Start/End: Complemental strand, 8210213 - 8210174
Alignment:
Q  468 tggtgaaaaatgttgaattcaactttctaaaagttaaaaa 507  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  8210213 tggtgaaaaatgatgaattcaactttttaaaagttaaaaa 8210174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 460 - 506
Target Start/End: Complemental strand, 4308880 - 4308834
Alignment:
Q  460 ttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaa 506  Q
    |||||||||||| ||||||| |||||| |||||| ||||||||||||    
T  4308880 ttgaaaaatggtaaaaaatgatgaatttaactttataaaagttaaaa 4308834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 709 - 787
Target Start/End: Original strand, 36032869 - 36032947
Alignment:
Q  709 acaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 787  Q
    |||||| |||||| ||||||| ||||| ||||||||||| |||||| | || || ||||||||||  |||||| |||||    
T  36032869 acaaggggtatgaggtgtcacagggacgaaagtgaaagtagaaaattgtcaattaggtccctgaagagaaaattgatat 36032947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 575 - 668
Target Start/End: Original strand, 8569437 - 8569530
Alignment:
Q  575 cacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaa 668  Q
    ||||||||| ||||| || ||  ||||||| |||||||||||||  ||| | ||| | ||||||| |||||||| ||||||| ||| |||||||    
T  8569437 cacctcgctctcacaaaggtctttgactcatgattaaatacaaagtagtttatgaatgtgcactttcgttatcagtttagtccctgacgttaaa 8569530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 736 - 793
Target Start/End: Original strand, 9625380 - 9625437
Alignment:
Q  736 taaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatcttcaa 793  Q
    |||||||||||| |||||||| |||||| || | ||||||||||||| ||||| ||||    
T  9625380 taaagtgaaagtagaaaatggtcactttagttcgtgaatcgaaaatcaatatcctcaa 9625437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 791 - 824
Target Start/End: Original strand, 10406510 - 10406543
Alignment:
Q  791 caacttactgttaggtccctgactgtgcatactt 824  Q
    ||||||| ||||||||||||||||||||||||||    
T  10406510 caacttattgttaggtccctgactgtgcatactt 10406543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 5e-40; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 562 - 695
Target Start/End: Complemental strand, 7945661 - 7945528
Alignment:
Q  562 gtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgt 661  Q
    |||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||     
T  7945661 gtccctgactctgcacctcgctgtcacataggttcctgactcaggattaaatacaaataagtctctgactatgcacttccgttatcactttagtccctga 7945562  T
Q  662 cgttaaannnnnnngttaagtgatgatgtggcac 695  Q
    |||||||       | ||||||||||||||||||    
T  7945561 cgttaaaaaaatatgctaagtgatgatgtggcac 7945528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 554 - 693
Target Start/End: Complemental strand, 32665885 - 32665746
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||||||||||| | |||| ||||||||||||||| || |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  32665885 tcactttagtccctgattctgcagctcgctgtcacataggtctctgactcatgattaaatacaaataagtctttgactctgcacttccgttatcacttta 32665786  T
Q  654 gtctctgtcgttaaannnnnnngttaagtgatgatgtggc 693  Q
    ||| ||| ||||| |       ||||||||||||||||||    
T  32665785 gtccctggcgttacaaaaatctgttaagtgatgatgtggc 32665746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 558 - 668
Target Start/End: Original strand, 5782426 - 5782536
Alignment:
Q  558 tttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtct 657  Q
    |||||||||||||| |||||||||||||||||||| || |||||||| ||||||||||||| |||||||||| | ||||||||| |||||||||||||||    
T  5782426 tttagtccctgactctgcacctcgctgtcacataggtctctgactcatgattaaatacaaagaagtctctgattatgcacttcccttatcactttagtct 5782525  T
Q  658 ctgtcgttaaa 668  Q
    ||| |||||||    
T  5782526 ctgacgttaaa 5782536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 557 - 693
Target Start/End: Original strand, 9339657 - 9339793
Alignment:
Q  557 ctttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtc 656  Q
    ||||||||||||| | |||| |||| ||| |||||| |||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||    
T  9339657 ctttagtccctgattctgcagctcgttgttacataggtccctgactcaggattaaatacaaataaatccccgactctgcacttccgttatcactttagtc 9339756  T
Q  657 tctgtcgttaaannnnnnngttaagtgatgatgtggc 693  Q
     ||| |||||||       ||||||||||||||||||    
T  9339757 cctgacgttaaaaaaatctgttaagtgatgatgtggc 9339793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 573 - 693
Target Start/End: Complemental strand, 10333282 - 10333162
Alignment:
Q  573 tgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnn 672  Q
    |||| |||||||| |||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||        
T  10333282 tgcagctcgctgttacataggtctctgactcaagattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctagcgttaaaaaaa 10333183  T
Q  673 nnngttaagtgatgatgtggc 693  Q
       ||||||||||||||||||    
T  10333182 tctgttaagtgatgatgtggc 10333162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 554 - 769
Target Start/End: Original strand, 8975167 - 8975382
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    ||||||| |||||| ||| ||||||| | ||||||| || ||||||||||| ||||||||| |||  ||||  ||| | ||||||| |||||||||||||    
T  8975167 tcactttggtccctaactttgcaccttgttgtcacaaaggtccctgactcaagattaaatataaagtagtccatgaatatgcactttcgttatcacttta 8975266  T
Q  654 gtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaa 753  Q
    |||| || |||||||       ||||| ||||||| || ||  ||  |||||| ||||||||||||||  |||||| ||||||||||||||||| |||||    
T  8975267 gtctttggcgttaaataattttgttaattgatgatatgacaaatgttttatgccgacaaggagtatgagatgtcacagggactaaagtgaaagtagaaaa 8975366  T
Q  754 tggccactttggtccc 769  Q
    ||| ||||||||||||    
T  8975367 tggtcactttggtccc 8975382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 554 - 788
Target Start/End: Original strand, 6612427 - 6612652
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||||||||||||| ||||||||||||| | | |  || |||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||    
T  6612427 tcactttagtccctgactctgcacctcgctgttataaatgtctctgactcatgattaaatacaaacaagtctctgactctgcacttccattatcacttta 6612526  T
Q  654 gtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaa 753  Q
     || ||| |||||||       |||||||||| ||||| |         ||||||||||||| ||||| ||||||| ||||||||| | ||||| |||||    
T  6612527 atccctgacgttaaataattttgttaagtgattatgtgac---------atgctgacaaggaatatgaggtgtcacagggactaaattcaaagtagaaaa 6612617  T
Q  754 tggccactttggtccctgaatcgaaaatcgatatc 788  Q
    ||  |||||| |||| |||| | |||||| |||||    
T  6612618 tgatcacttttgtccttgaaccaaaaatcaatatc 6612652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 585 - 668
Target Start/End: Complemental strand, 9341109 - 9341026
Alignment:
Q  585 tcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaa 668  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||    
T  9341109 tcacataggtccctgactcaggattaaatacaaataagtctctgactttgcacttctgttatcactttagtctctgacgttaaa 9341026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 566 - 657
Target Start/End: Complemental strand, 52440662 - 52440571
Alignment:
Q  566 ctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtct 657  Q
    |||||| ||||| |||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  52440662 ctgactttgcacatcgctgtcacataggtccctgagtcaggattaaatataaataagtctctgactctgcacttccattatcactttagtct 52440571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 554 - 656
Target Start/End: Original strand, 10332994 - 10333096
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||||||||||||| ||||||||| |||||||||| ||| ||| ||||||||||||| ||||||||| || |||||||||||||||||||| ||||    
T  10332994 tcactttagtccctgactttgcacctcgttgtcacataggtccttgattcaggattaaatataaataagtcccttactctgcacttccgttatcatttta 10333093  T
Q  654 gtc 656  Q
    |||    
T  10333094 gtc 10333096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 554 - 668
Target Start/End: Original strand, 22856688 - 22856802
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    ||||||||||| |||||| |||||| || ||| ||| |||| | ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  22856688 tcactttagtcactgactctgcaccacgttgttacaaagattcttgactcaggattaaatacaaagaagtctctaactctgcacttccgttatcacttta 22856787  T
Q  654 gtctctgtcgttaaa 668  Q
    ||||| | |||||||    
T  22856788 gtctccgacgttaaa 22856802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 425 - 509
Target Start/End: Original strand, 51046645 - 51046728
Alignment:
Q  425 cattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaagt 509  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||| |||||||    
T  51046645 cattggttaagag-aacataaatagaaataatttgttgaaaaatggtgaaaagtgttgaattcaactttttaaaagtcaaaaagt 51046728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 573 - 656
Target Start/End: Complemental strand, 5783205 - 5783122
Alignment:
Q  573 tgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtc 656  Q
    ||||||||||||||||||||||||  ||||||| |||||||||||| |||||  ||||||||||||||||||||||||||||||    
T  5783205 tgcacctcgctgtcacatagatcctcgactcagaattaaatacaaagaagtccatgactctgcacttccgttatcactttagtc 5783122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 560 - 656
Target Start/End: Original strand, 7944169 - 7944265
Alignment:
Q  560 tagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtc 656  Q
    |||||||||| | |||| ||||||||||||||| |||||||||||  ||||||||||||||||||  ||||||||||||| |||||||| |||||||    
T  7944169 tagtccctgattttgcaactcgctgtcacataggtccctgactcaaaattaaatacaaataagtccttgactctgcactttcgttatcaatttagtc 7944265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 554 - 691
Target Start/End: Original strand, 52439487 - 52439620
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    ||||||||| |||||| | |||| ||||||||||||||| || ||| |||||||||||||||| ||||||||    ||||||| ||||||||||||||||    
T  52439487 tcactttagcccctgattctgcagctcgctgtcacataggtctctggctcaggattaaatacagataagtct----ctctgcatttccgttatcacttta 52439582  T
Q  654 gtctctgtcgttaaannnnnnngttaagtgatgatgtg 691  Q
    ||| ||| |||||||       ||||||||||||||||    
T  52439583 gtccctgacgttaaaaaaatctgttaagtgatgatgtg 52439620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 707 - 801
Target Start/End: Complemental strand, 534510 - 534416
Alignment:
Q  707 tgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatcttcaacttactgt 801  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||  ||||||| |||  |||||||||||| ||||| |||| |||||||    
T  534510 tgacaaggagtatgacgtgtcacggggactaaagtgaaagtaaaaaatgatcactttgatccacgaatcgaaaatcaatatcctcaatttactgt 534416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 438 - 507
Target Start/End: Complemental strand, 32268102 - 32268033
Alignment:
Q  438 gaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaa 507  Q
    ||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||    
T  32268102 gaacataaataaaaataatttgttgaaaaatggtgaaaagtgttgaattcaactttctaaaagtcaaaaa 32268033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 597 - 656
Target Start/End: Complemental strand, 6614051 - 6613992
Alignment:
Q  597 ctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtc 656  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  6614051 ctgactcaggattaaatacaaataagtctctgactctgcacttcagttatcattttagtc 6613992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 597 - 781
Target Start/End: Complemental strand, 50107275 - 50107091
Alignment:
Q  597 ctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaagtgatgatgtggcact 696  Q
    |||| |||||||||||||||||  ||||||||| | ||||||||||||||||||||||||  || |||||||       ||||| ||||||  || ||      
T  50107275 ctgattcaggattaaatacaaaatagtctctgaatgtgcacttccgttatcactttagtccttggcgttaaataattatgttaactgatgacatgacaaa 50107176  T
Q  697 tggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaat 781  Q
     |  ||||||||||||||||||||| |||||||  ||||||| |||||||| | | |||| ||||||||||| | || |||||||    
T  50107175 ggttttatgctgacaaggagtatgaggtgtcacatggactaacgtgaaagtaggacatggtcactttggtcctttaaccgaaaat 50107091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 427 - 519
Target Start/End: Complemental strand, 13925191 - 13925101
Alignment:
Q  427 ttggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaagtaataatttcc 519  Q
    ||||||||||| |||||||||||||||||||| ||||||||| ||||||| |||| ||||||||| ||||||||| |||||||  ||||||||    
T  13925191 ttggttaagag-aacataaatagaaataatttgttgaaaaatagtgaaaagtgtt-aattcaactatctaaaagtcaaaaagttgtaatttcc 13925101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 556 - 657
Target Start/End: Original strand, 1001164 - 1001265
Alignment:
Q  556 actttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagt 655  Q
    |||||||||| ||||| ||||||||| || |||| || ||| |||||| ||||||||||||||  ||||||||| | |||||||| ||||||| ||||||    
T  1001164 actttagtccatgactttgcacctcgttgccacaaaggtccatgactcgggattaaatacaaagtagtctctgaatgtgcacttctgttatcagtttagt 1001263  T
Q  656 ct 657  Q
    ||    
T  1001264 ct 1001265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 554 - 788
Target Start/End: Complemental strand, 11060899 - 11060666
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||  ||| ||||| ||||||||||||||||| || ||| |||||||  ||||||||||||  |||| |||| |  |||||| |||||||||||||    
T  11060899 tcactttgatccttgactatgcacctcgctgtcacaaaggtccatgactcaaaattaaatacaaaatagtccctgaatgggcactttcgttatcacttta 11060800  T
Q  654 gtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaa 753  Q
    ||| | | |||||||       ||||| |||||| |||| |   |  |||| ||||||||| |||||| || ||||   ||||||||||||||| |||||    
T  11060799 gtccccgacgttaaataattctgttaactgatgacgtggaaaaggttttattctgacaaggggtatgaggt-tcacaatgactaaagtgaaagtagaaaa 11060701  T
Q  754 tggccactttggtccctgaatcgaaaatcgatatc 788  Q
    | | ||||||| ||||||||  ||||||| |||||    
T  11060700 ttgtcactttgatccctgaacagaaaatcaatatc 11060666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 554 - 788
Target Start/End: Original strand, 44719358 - 44719592
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||  ||| ||||| |||| |||| ||||||| ||||| || ||||||||||||||| |||  ||| | ||| | |||||||||||||||| ||||    
T  44719358 tcactttgatccttgactttgcatctcgttgtcacaaagatctctaactcaggattaaatataaagtagtttatgaatatgcacttccgttatcatttta 44719457  T
Q  654 gtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaa 753  Q
    ||||||||| |||||       ||| | ||||| |||||||   |  ||||||| |||||| |||  | |||||||  | |||||| ||||||| |||||    
T  44719458 gtctctgtctttaaataattttgttcattgatgttgtggcaaaggttttatgctaacaaggggtacaatgtgtcacatgaactaaaatgaaagtagaaaa 44719557  T
Q  754 tggccactttggtccctgaatcgaaaatcgatatc 788  Q
    | | ||||||| ||||||||  ||||||| |||||    
T  44719558 ttgtcactttgctccctgaactgaaaatcaatatc 44719592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 558 - 654
Target Start/End: Original strand, 3117661 - 3117757
Alignment:
Q  558 tttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttag 654  Q
    |||||||||| ||| | ||| ||| | ||||| || || |||||||| ||||||||||||| || ||||||||||| ||||||||||||||||||||    
T  3117661 tttagtccctaactcttcacatcgttatcacaaaggtctctgactcaagattaaatacaaagaaatctctgactctccacttccgttatcactttag 3117757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 556 - 648
Target Start/End: Original strand, 44019996 - 44020088
Alignment:
Q  556 actttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatca 648  Q
    ||||| |||||||||| |||| |||| ||||||| |  || |||||||| ||||||||| ||| |||||||||||||||||||| ||||||||    
T  44019996 actttggtccctgactttgcaactcgttgtcacaaaagtctctgactcaagattaaatataaagaagtctctgactctgcacttacgttatca 44020088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 556 - 755
Target Start/End: Original strand, 51450011 - 51450209
Alignment:
Q  556 actttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagt 655  Q
    ||||||| | |||||| |||||||||| |||||| || | ||| |||||  ||||||| |||| |||| ||||||||||||||| || ||||| ||||||    
T  51450011 actttagccgctgactctgcacctcgccgtcacaaaggttcctaactcataattaaatgcaaagaagtttctgactctgcactttcg-tatcattttagt 51450109  T
Q  656 ctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatg 755  Q
     |||| |||||||       |||||||| ||||||| ||| ||  ||| | ||||| |   ||||| ||||||| ||||||||| ||||||| |||||||    
T  51450110 atctgacgttaaataattttgttaagtggtgatgtgacacatgttttacgatgacatgtcatatgaggtgtcacagggactaaactgaaagtagaaaatg 51450209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 424 - 501
Target Start/End: Original strand, 1107386 - 1107462
Alignment:
Q  424 gcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagt 501  Q
    |||||||||||||| |||||||||| ||||||||| || | ||| |||||||| ||||||||||||||| ||||||||    
T  1107386 gcattggttaagag-aacataaataaaaataatttgttaataaacggtgaaaagtgttgaattcaacttcctaaaagt 1107462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 594 - 655
Target Start/End: Original strand, 25037926 - 25037987
Alignment:
Q  594 tccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagt 655  Q
    ||||||||||| ||||||||||||| ||||| ||||||||| |||| |||||||||||||||    
T  25037926 tccctgactcatgattaaatacaaagaagtcactgactctggacttacgttatcactttagt 25037987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 594 - 655
Target Start/End: Original strand, 25043138 - 25043199
Alignment:
Q  594 tccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagt 655  Q
    ||||||||||| ||||||||||||| ||||| ||||||||| |||| |||||||||||||||    
T  25043138 tccctgactcatgattaaatacaaagaagtcactgactctggacttacgttatcactttagt 25043199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 573 - 653
Target Start/End: Complemental strand, 534653 - 534574
Alignment:
Q  573 tgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    ||||||||||||| |||||| | | ||| ||||||||||||||||| ||||| |||||||| |||||| ||||||||||||    
T  534653 tgcacctcgctgttacataggttcttgattcaggattaaatacaaacaagtc-ctgactctacacttctgttatcacttta 534574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 407 - 501
Target Start/End: Complemental strand, 39421126 - 39421026
Alignment:
Q  407 taaagagtgtcctttgtgcattggttaagaggaacataaatagaaataatttcttgaaaaatgg-------tgaaaaatgttgaattcaactttctaaaa 499  Q
    |||| ||||||||| |  ||||||||||||| |||||||||||||||||||| |||||||| ||       |||||| ||||||||||||||||||||||    
T  39421126 taaacagtgtccttgggacattggttaagag-aacataaatagaaataatttgttgaaaaacggtggaaactgaaaagtgttgaattcaactttctaaaa 39421028  T
Q  500 gt 501  Q
    ||    
T  39421027 gt 39421026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 764 - 824
Target Start/End: Complemental strand, 534382 - 534322
Alignment:
Q  764 ggtccctgaatcgaaaatcgatatcttcaacttactgttaggtccctgactgtgcatactt 824  Q
    ||||||||||||||||||| ||||| |||| ||| |||||||||| |||||||| ||||||    
T  534382 ggtccctgaatcgaaaatcaatatcctcaatttattgttaggtccttgactgtgtatactt 534322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 717 - 773
Target Start/End: Complemental strand, 9340997 - 9340941
Alignment:
Q  717 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaa 773  Q
    ||||| ||||||| ||||| ||||||||||| |||||||| ||||||||||||||||    
T  9340997 tatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaa 9340941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 471 - 519
Target Start/End: Original strand, 12173173 - 12173221
Alignment:
Q  471 tgaaaaatgttgaattcaactttctaaaagttaaaaagtaataatttcc 519  Q
    ||||||||||||||||||||||| ||||||| ||||||| |||||||||    
T  12173173 tgaaaaatgttgaattcaactttgtaaaagtcaaaaagttataatttcc 12173221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 641 - 729
Target Start/End: Original strand, 33342511 - 33342599
Alignment:
Q  641 cgttatcactttagtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcac 729  Q
    |||||||||||||||||||| |||||||       |||||||||||||||| ||   |  ||||||||||||||||||||| |||||||    
T  33342511 cgttatcactttagtctctgacgttaaataattatgttaagtgatgatgtgacaaaagttttatgctgacaaggagtatgaggtgtcac 33342599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 606 - 653
Target Start/End: Complemental strand, 34088532 - 34088485
Alignment:
Q  606 gattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    ||||||||||||| ||||||||||||||||||||||  ||||||||||    
T  34088532 gattaaatacaaagaagtctctgactctgcacttccactatcacttta 34088485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 471 - 545
Target Start/End: Original strand, 46289632 - 46289705
Alignment:
Q  471 tgaaaaatgttgaattcaactttctaaaagttaaaaagtaataatttccgggtgcaaaattattacttttagttt 545  Q
    ||||||||||||||||| ||||| |||||||||||||||  ||||||||   ||||||| || ||||||||||||    
T  46289632 tgaaaaatgttgaattcgactttttaaaagttaaaaagttgtaatttcc-aatgcaaaactactacttttagttt 46289705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 439 - 499
Target Start/End: Complemental strand, 3894861 - 3894800
Alignment:
Q  439 aacataaatagaaataatttctt-gaaaaatggtgaaaaatgttgaattcaactttctaaaa 499  Q
    |||||||||||||||||||| || ||||||| ||||||||||||||||| | |||| |||||    
T  3894861 aacataaatagaaataatttgttagaaaaatagtgaaaaatgttgaatttagctttttaaaa 3894800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 791 - 824
Target Start/End: Complemental strand, 9340844 - 9340811
Alignment:
Q  791 caacttactgttaggtccctgactgtgcatactt 824  Q
    ||||||||||||||||||||||||||||||||||    
T  9340844 caacttactgttaggtccctgactgtgcatactt 9340811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 724 - 788
Target Start/End: Original strand, 9339804 - 9339868
Alignment:
Q  724 tgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatc 788  Q
    |||||| ||||| ||||||||||| |||||||| |||||||||| ||||| | |||||| |||||    
T  9339804 tgtcacagggaccaaagtgaaagtagaaaatggtcactttggtctctgaaccaaaaatcaatatc 9339868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 701 - 781
Target Start/End: Original strand, 11059771 - 11059851
Alignment:
Q  701 ttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaat 781  Q
    ||||| ||||||||||||||| ||||||| |||||||||||| | ||  ||||| | ||||||| ||||| || |||||||    
T  11059771 ttatggtgacaaggagtatgaggtgtcacagggactaaagtggaggtaaaaaattgtcactttgatccctcaaccgaaaat 11059851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 717 - 773
Target Start/End: Complemental strand, 32665742 - 32665686
Alignment:
Q  717 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaa 773  Q
    ||||| |||||||  |||| ||||||||||| |||||||| ||||||||||||||||    
T  32665742 tatgaggtgtcacaaggaccaaagtgaaagtagaaaatggtcactttggtccctgaa 32665686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 407 - 474
Target Start/End: Original strand, 46289579 - 46289645
Alignment:
Q  407 taaagagtgtcctttgtgcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaa 474  Q
    ||||||||||| || | ||||||||||| || || ||||||||||||||||| |||||||||| ||||    
T  46289579 taaagagtgtctttagggcattggttaaaag-aatataaatagaaataatttgttgaaaaatgttgaa 46289645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 461 - 507
Target Start/End: Complemental strand, 27210795 - 27210749
Alignment:
Q  461 tgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaa 507  Q
    ||||||||||||||||||| | |||| |||||| |||||||||||||    
T  27210795 tgaaaaatggtgaaaaatgatcaatttaactttttaaaagttaaaaa 27210749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 444 - 506
Target Start/End: Original strand, 41898878 - 41898940
Alignment:
Q  444 aaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaa 506  Q
    ||||||||||| | | |||||||||||| |||| || |||||| |||||| ||||||||||||    
T  41898878 aaatagaaatattgtattgaaaaatggtaaaaagtgatgaatttaactttttaaaagttaaaa 41898940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 735 - 788
Target Start/End: Original strand, 16249832 - 16249885
Alignment:
Q  735 ctaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatc 788  Q
    ||||||||||||| |||||||| || ||| ||||||||| |||||||| |||||    
T  16249832 ctaaagtgaaagtagaaaatggtcattttagtccctgaaccgaaaatcaatatc 16249885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 4e-34; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 554 - 656
Target Start/End: Complemental strand, 53771164 - 53771062
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||||||||||| ||| | ||||||||||||||||||||||||||||    
T  53771164 tcactttagtccctgactctgcacctcgttgtcacataggtccctgactcagaattaaatacaaagaagcccctgactctgcacttccgttatcacttta 53771065  T
Q  654 gtc 656  Q
    |||    
T  53771064 gtc 53771062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 554 - 787
Target Start/End: Complemental strand, 26173057 - 26172822
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||||||||  ||| |||||||  |||||| | || ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26173057 tcactttagtccccaactatgcaccttactgtcagaaaggtccttgactcaagattaaatacaaataagtctctgactctgcacttccgttatcacttta 26172958  T
Q  654 gtctctgtcgttaaannnnnnngtt--aagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaa 751  Q
    |||  || |||||||       |||  ||||||| ||||||||| ||  |||||   ||||||||||||| |||||||   ||||||||||| ||| |||    
T  26172957 gtccatgccgttaaaaaattatgttaaaagtgataatgtggcacatgttttatgtcaacaaggagtatgaggtgtcacaatgactaaagtgacagtagaa 26172858  T
Q  752 aatggccactttggtccctgaatcgaaaatcgatat 787  Q
    |||   |||||| || |||||||| |||||| ||||    
T  26172857 aataatcactttagttcctgaatcaaaaatcaatat 26172822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 554 - 656
Target Start/End: Complemental strand, 47878599 - 47878497
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||  ||||||||| ||||||||||||| |||||| |||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||    
T  47878599 tcactttgatccctgactctgcacctcgctgttacataggtccctgactctggattaaatacaaataagtccctgactctacacttccgttatcacttta 47878500  T
Q  654 gtc 656  Q
    |||    
T  47878499 gtc 47878497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 554 - 692
Target Start/End: Original strand, 42278057 - 42278195
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||||||| ||| | |||| || |||||||||||| |||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||    
T  42278057 tcactttagtccttgattctgcagcttgctgtcacataggtccctgactcgggattaaatacaaataagttcctgactctgcacttccgttatcacttta 42278156  T
Q  654 gtctctgtcgttaaannnnnnngttaagtgatgatgtgg 692  Q
     || ||| |||||||       |||||||||||||||||    
T  42278157 atccctgacgttaaaaaaatctgttaagtgatgatgtgg 42278195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 543 - 656
Target Start/End: Original strand, 47874559 - 47874674
Alignment:
Q  543 tttgagtaaat--tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttc 640  Q
    |||||||||||  ||||||||||| |||| | |||| |||||| |||||||| ||||||||||| ||||||||||||||||||| |||| ||||||||||    
T  47874559 tttgagtaaatagtcactttagtctctgattctgcagctcgctatcacataggtccctgactcaagattaaatacaaataagtccctgattctgcacttc 47874658  T
Q  641 cgttatcactttagtc 656  Q
    ||||||||||||||||    
T  47874659 cgttatcactttagtc 47874674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 554 - 665
Target Start/End: Original strand, 31844730 - 31844841
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    ||||||||||||||  || |||||||||||||||||||| ||||||||||||||||||||||||| ||||| || ||||| ||||||| ||||||||||     
T  31844730 tcactttagtccctagctctgcacctcgctgtcacataggtccctgactcaggattaaatacaaacaagtccctaactctacacttcccttatcactttg 31844829  T
Q  654 gtctctgtcgtt 665  Q
    ||| ||||||||    
T  31844830 gtcactgtcgtt 31844841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 554 - 668
Target Start/End: Original strand, 53770341 - 53770455
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    ||||||||||| |||||| ||||||||||  |||||||| | |||||||||| |||||||||||| |||||| ||||||||||||||| |||||||| ||    
T  53770341 tcactttagtctctgactctgcacctcgcattcacataggttcctgactcagaattaaatacaaagaagtctatgactctgcacttccattatcactcta 53770440  T
Q  654 gtctctgtcgttaaa 668  Q
    ||||||| |||||||    
T  53770441 gtctctgccgttaaa 53770455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 556 - 691
Target Start/End: Original strand, 39868932 - 39869065
Alignment:
Q  556 actttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagt 655  Q
    ||||||||| |||||| ||||||||||||| ||| || |||||||||||  |||||||||||| |||| || ||||||||||||||||||||||||||||    
T  39868932 actttagtctctgactctgcacctcgctgttacaaaggtccctgactcataattaaatacaaacaagt-tc-gactctgcacttccgttatcactttagt 39869029  T
Q  656 ctctgtcgttaaannnnnnngttaagtgatgatgtg 691  Q
    ||||| |||||||       ||||||||||||||||    
T  39869030 ctctgacgttaaataattatgttaagtgatgatgtg 39869065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 562 - 782
Target Start/End: Complemental strand, 21623224 - 21623004
Alignment:
Q  562 gtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgt 661  Q
    |||| ||||| |||| |||| |||||||  | ||||||| |||||||||||||||||  ||||  ||| | |||||||| ||||||||||||||| | |     
T  21623224 gtccttgactctgcatctcgttgtcacaatgttccctgattcaggattaaatacaaaatagtccttgaatgtgcacttctgttatcactttagtccccga 21623125  T
Q  662 cgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccact 761  Q
    |||||||       ||||| | ||||||||||||  |  |||| |||||||||||||||| ||||||| | ||||||| ||||||| |||||||| ||||    
T  21623124 cgttaaataattatgttaactaatgatgtggcacaagttttatactgacaaggagtatgaggtgtcacagagactaaaatgaaagtagaaaatggtcact 21623025  T
Q  762 ttggtccctgaatcgaaaatc 782  Q
    ||| ||  |||| ||||||||    
T  21623024 ttgctctatgaaccgaaaatc 21623004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 554 - 660
Target Start/End: Complemental strand, 4703332 - 4703226
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    ||||||||||  |||||| | || ||||||||||||||| ||||| |||||| |||||||||||| |||||| ||||| | |||||||||||||||||||    
T  4703332 tcactttagttactgactctacatctcgctgtcacataggtccctaactcagaattaaatacaaagaagtctttgactgtacacttccgttatcacttta 4703233  T
Q  654 gtctctg 660  Q
    |||||||    
T  4703232 gtctctg 4703226  T

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Target: chr4; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 554 - 668
Target Start/End: Complemental strand, 48740135 - 48740021
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||||||| || || ||||||||  |||||| |||||||||||||||  |||||||||||| ||||| |  |||||||||||| ||||||||||||    
T  48740135 tcactttagtccatgtctctgcacctcattgtcacgtagatccctgactcataattaaatacaaagaagtccccaactctgcacttctgttatcacttta 48740036  T
Q  654 gtctctgtcgttaaa 668  Q
    ||| ||| |||||||    
T  48740035 gtccctgacgttaaa 48740021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 558 - 739
Target Start/End: Original strand, 26170652 - 26170833
Alignment:
Q  558 tttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtct 657  Q
    ||||||| |||||| ||||||||| ||| ||| |  |  |||||| | ||||||||||||||||||  || ||||||||||||| ||||||||||||||     
T  26170652 tttagtctctgactttgcacctcgttgttacaaaagtatctgacttaagattaaatacaaataagttccttactctgcacttccattatcactttagtcc 26170751  T
Q  658 ctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaa 739  Q
     ||  ||||||       |||||||||||||||| ||| ||  ||||||||||||||||||||| ||| || ||||| ||||    
T  26170752 atgctgttaaaaaattttgttaagtgatgatgtgacacatgttttatgctgacaaggagtatgaggtgccagggggattaaa 26170833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 573 - 653
Target Start/End: Original strand, 54574452 - 54574532
Alignment:
Q  573 tgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||| ||||||||||||||| || |||||||||||||||||||||||||||   | |||||||||||||||||||||||||    
T  54574452 tgcatctcgctgtcacataggtctctgactcaggattaaatacaaataagttcttaactctgcacttccgttatcacttta 54574532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 424 - 519
Target Start/End: Original strand, 4867772 - 4867866
Alignment:
Q  424 gcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaagtaataatttcc 519  Q
    |||||||||||||| |||||||||| ||||||||| ||||||| ||||||||| |||||||||||| ||| ||||||| |||||||  ||||||||    
T  4867772 gcattggttaagag-aacataaataaaaataatttgttgaaaagtggtgaaaagtgttgaattcaaatttttaaaagtcaaaaagttgtaatttcc 4867866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 606 - 788
Target Start/End: Original strand, 19050298 - 19050478
Alignment:
Q  606 gattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatg 705  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||||||| | |||||||        |||||||||||||||  || ||  ||| |    
T  19050298 gattaaatacaaagaagtctcggactctgcacttccgttatcactttagtctccgacgttaaataattctattaagtgatgatgtg--acatgttttacg 19050395  T
Q  706 ctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatc 788  Q
     ||| | ||  ||||| |||||||  ||||||||||||||||  ||||||  ||||||||||| |||| | |||||| |||||    
T  19050396 atgatatggcatatgaggtgtcacatggactaaagtgaaagtataaaatgatcactttggtccttgaagcaaaaatcaatatc 19050478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 558 - 660
Target Start/End: Complemental strand, 26685528 - 26685431
Alignment:
Q  558 tttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtct 657  Q
    |||||||||||||| |||||||||||||||||||| ||||| |||     ||||||||| | |||||  ||||| |||||||||||||||||||||||||    
T  26685528 tttagtccctgactctgcacctcgctgtcacataggtccctcact-----ttaaatacatagaagtccttgactatgcacttccgttatcactttagtct 26685434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 424 - 509
Target Start/End: Original strand, 45674164 - 45674248
Alignment:
Q  424 gcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaagt 509  Q
    ||||||||||| || || |||||||||| |||||| ||||||||| ||||||| |||||||||||||||||| |||||||||||||    
T  45674164 gcattggttaaaagaaa-ataaatagaattaatttgttgaaaaatagtgaaaagtgttgaattcaactttcttaaagttaaaaagt 45674248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 594 - 773
Target Start/End: Original strand, 21621871 - 21622050
Alignment:
Q  594 tccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaagtgatgatgtggc 693  Q
    |||||||||||||||||||||||||  ||||  ||| | |||||||||||||||||||||||| |||  ||||||       ||||| |||||||||| |    
T  21621871 tccctgactcaggattaaatacaaaatagtcattgaatgtgcacttccgttatcactttagtccctgatgttaaataattatgttaactgatgatgtgac 21621970  T
Q  694 acttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaa 773  Q
    |      ||| |||||| |||||||||| |||||||  | ||||||||||||||  ||||||| ||||||| | ||||||    
T  21621971 aaagattttacgctgacgaggagtatgatgtgtcacaagcactaaagtgaaagtataaaatggtcactttgattcctgaa 21622050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 554 - 668
Target Start/End: Complemental strand, 39870789 - 39870675
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||| || |||||| |||||||||||||||||||  | ||||| ||| ||||||| ||| | || || ||||||||||||||||| |||||||| |    
T  39870789 tcactttaatctctgactctgcacctcgctgtcacataagttcctgagtcaagattaaacacagagaaatcactgactctgcacttccgatatcacttca 39870690  T
Q  654 gtctctgtcgttaaa 668  Q
    ||||| | |||||||    
T  39870689 gtctcaggcgttaaa 39870675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 554 - 647
Target Start/End: Complemental strand, 19051346 - 19051253
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatc 647  Q
    |||||||||||||||||| | ||||||| || |||| || || |||||||  ||||||||||||| |||||||||||||| ||||| |||||||    
T  19051346 tcactttagtccctgactctacacctcgttggcacaaaggtcactgactcgagattaaatacaaagaagtctctgactctacactttcgttatc 19051253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 596 - 781
Target Start/End: Original strand, 6039171 - 6039356
Alignment:
Q  596 cctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaagtgatgatgtggcac 695  Q
    |||||||||  |||||||| ||||||||||||| || |||||||| | ||||| |||||||  || ||||||        ||||| |||||| ||| |||    
T  6039171 cctgactcaaaattaaatataaataagtctctggctatgcacttctggtatcattttagtccgtgccgttaataaaatttgttaaatgatgacgtgacac 6039270  T
Q  696 ttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaat 781  Q
     |   |||||||||||| |||||||| ||||||  ||||| |||||||  || |||||||| ||||||| |||||||| |||||||    
T  6039271 atattttatgctgacaatgagtatgaggtgtcatagggaccaaagtgagtgtagaaaatggtcactttgctccctgaaccgaaaat 6039356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 594 - 691
Target Start/End: Original strand, 50694797 - 50694894
Alignment:
Q  594 tccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaagtgatgatgtg 691  Q
    |||||||||||  |||||||| |||||||| ||||| ||||||||||||||||| |||||||| ||| |||||||       ||||||||||||||||    
T  50694797 tccctgactcaaaattaaatataaataagtttctgattctgcacttccgttatctctttagtccctgacgttaaaaaattctgttaagtgatgatgtg 50694894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 598 - 652
Target Start/End: Complemental strand, 54574876 - 54574822
Alignment:
Q  598 tgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttt 652  Q
    |||||||||||||||||||||||| ||||| |||||||||||| |||||||||||    
T  54574876 tgactcaggattaaatacaaataaatctctaactctgcacttctgttatcacttt 54574822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 597 - 767
Target Start/End: Complemental strand, 31845027 - 31844866
Alignment:
Q  597 ctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnnngttaagtgatgatgtggcact 696  Q
    |||||||||||||||||||||| || | |  |||||| |||||||||||||| ||| |||  ||  ||||||       |||||||||||||||| |||     
T  31845027 ctgactcaggattaaatacaaacaaattttagactctacacttccgttatcattttcgtccttgcagttaaaaaaatatgttaagtgatgatgtgacac- 31844929  T
Q  697 tggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtc 767  Q
            ||| |||||||||||||||||||||  ||||||||||||||||  ||||||| ||||||||||    
T  31844928 --------gctaacaaggagtatgacgtgtcacaaggactaaagtgaaagtaaaaaatggtcactttggtc 31844866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 543 - 624
Target Start/End: Complemental strand, 42392016 - 42391933
Alignment:
Q  543 tttgagtaaat--tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtc 624  Q
    |||||||||||  ||||||||||| ||||||  ||||||| ||||||||||| || |||||||| |||||||||||||| ||||    
T  42392016 tttgagtaaatgatcactttagtctctgactccgcacctcactgtcacataggtctctgactcatgattaaatacaaattagtc 42391933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 575 - 773
Target Start/End: Original strand, 4701794 - 4701990
Alignment:
Q  575 cacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaannnnnn 674  Q
    ||||||||||||||| || ||  ||||| | ||||||||||||| ||||| | |||| |||||||||| ||||||||||||| |||  ||||||          
T  4701794 cacctcgctgtcacaaaggtctatgacttatgattaaatacaaagaagtccccgactatgcacttccgctatcactttagtccctgatgttaaataattc 4701893  T
Q  675 ngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaa 773  Q
     ||||||||||||| |  |||  |  ||| | ||||  |  | |||| |||||||  |||||||||||||||| |||||| | ||||||||||||||||    
T  4701894 tgttaagtgatgatattacacaagttttacgatgac--gtggcatgaagtgtcacatggactaaagtgaaagtagaaaatagtcactttggtccctgaa 4701990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 452 - 509
Target Start/End: Complemental strand, 45684046 - 45683989
Alignment:
Q  452 ataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaagt 509  Q
    ||||||| ||||||| ||||||||| |||||||||||| ||| |||||||||||||||    
T  45684046 ataatttgttgaaaagtggtgaaaagtgttgaattcaaatttataaaagttaaaaagt 45683989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 701 - 788
Target Start/End: Original strand, 32244429 - 32244516
Alignment:
Q  701 ttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatc 788  Q
    |||||||||||| |||||||  ||||||| | |||||||||||||||  ||||||| ||||||| || ||| | |||||||| |||||    
T  32244429 ttatgctgacaaagagtatggggtgtcacagagactaaagtgaaagtaaaaaatggtcactttgatctctgcaccgaaaatcaatatc 32244516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 717 - 788
Target Start/End: Original strand, 42278200 - 42278271
Alignment:
Q  717 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatc 788  Q
    ||||| ||||||| ||||| ||||||||| | |||||||| |||||||||||||||| | |||||| |||||    
T  42278200 tatgaggtgtcacagggaccaaagtgaaactagaaaatggtcactttggtccctgaaccaaaaatcaatatc 42278271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 558 - 633
Target Start/End: Original strand, 44158516 - 44158591
Alignment:
Q  558 tttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactct 633  Q
    ||||| ||| |||| ||||||||| ||| ||| || | ||||||||||||||||||||||| ||||| ||||||||    
T  44158516 tttagcccccgactctgcacctcgttgttacagaggttcctgactcaggattaaatacaaagaagtccctgactct 44158591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 701 - 747
Target Start/End: Complemental strand, 32244656 - 32244610
Alignment:
Q  701 ttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagt 747  Q
    ||||||||||||||||||||| ||||||| | |||||||||||||||    
T  32244656 ttatgctgacaaggagtatgaggtgtcacagtgactaaagtgaaagt 32244610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 717 - 787
Target Start/End: Complemental strand, 47878456 - 47878386
Alignment:
Q  717 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatat 787  Q
    ||||| ||||||  ||||| ||||||||||| |||||||| |||||||||||||||| | |||||| ||||    
T  47878456 tatgaggtgtcatagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatat 47878386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 717 - 773
Target Start/End: Complemental strand, 20599858 - 20599802
Alignment:
Q  717 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaa 773  Q
    ||||| ||||||| ||||||||| |||||||  ||||||| ||||||||||||||||    
T  20599858 tatgaggtgtcacagggactaaaatgaaagtaaaaaatggtcactttggtccctgaa 20599802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 717 - 788
Target Start/End: Original strand, 47874714 - 47874785
Alignment:
Q  717 tatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatc 788  Q
    ||||| ||||||| ||||| |||||||||||  ||||||| ||||||||||| |||| | |||||| |||||    
T  47874714 tatgatgtgtcacagggaccaaagtgaaagtataaaatggtcactttggtccttgaaccaaaaatcaatatc 47874785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 407 - 493
Target Start/End: Original strand, 29722067 - 29722152
Alignment:
Q  407 taaagagtgtcctttgtgcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaacttt 493  Q
    ||||||||| |||| | |||||||||| | |||||| ||||||| ||| | | |||||| ||||||||||||| |||||| ||||||    
T  29722067 taaagagtgcccttagggcattggttagg-ggaacaaaaatagatatattgtgttgaaatatggtgaaaaatgatgaatttaacttt 29722152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 471 - 545
Target Start/End: Complemental strand, 35911224 - 35911151
Alignment:
Q  471 tgaaaaatgttgaattcaactttctaaaagttaaaaagtaataatttccgggtgcaaaattattacttttagttt 545  Q
    |||||| |||||||||||| ||| ||||||| ||||||| ||||||| |   |||||||||| ||||||||||||    
T  35911224 tgaaaagtgttgaattcaaatttttaaaagtcaaaaagttataattttc-aatgcaaaattactacttttagttt 35911151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 723 - 773
Target Start/End: Complemental strand, 42391852 - 42391802
Alignment:
Q  723 gtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaa 773  Q
    |||||||  |||||||||||||||| |||||||| |||||| |||||||||    
T  42391852 gtgtcacatggactaaagtgaaagtagaaaatggtcactttagtccctgaa 42391802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 598 - 655
Target Start/End: Original strand, 2786273 - 2786330
Alignment:
Q  598 tgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagt 655  Q
    |||||||||||||||||||||| | ||  ||| | |||||||||||||||| ||||||    
T  2786273 tgactcaggattaaatacaaattactccttgaatgtgcacttccgttatcattttagt 2786330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 606 - 667
Target Start/End: Complemental strand, 25810476 - 25810415
Alignment:
Q  606 gattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaa 667  Q
    |||||||||||||  || || ||| | |||||||||| ||||||||||||||||| ||||||    
T  25810476 gattaaatacaaagtagcctatgaatgtgcacttccgctatcactttagtctctgacgttaa 25810415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 426 - 507
Target Start/End: Original strand, 45257608 - 45257688
Alignment:
Q  426 attggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaa 507  Q
    |||||||||||| |||| ||||||||||| ||| |||  || || |||||| || ||||||||||||| |||||| ||||||    
T  45257608 attggttaagag-aacaaaaatagaaatattttgttgggaagtgttgaaaagtggtgaattcaactttttaaaagctaaaaa 45257688  T

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Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 791 - 824
Target Start/End: Original strand, 54574744 - 54574777
Alignment:
Q  791 caacttactgttaggtccctgactgtgcatactt 824  Q
    |||||||||||||||||||| |||||||||||||    
T  54574744 caacttactgttaggtccctaactgtgcatactt 54574777  T

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Target: scaffold0034 (Bit Score: 71; Significance: 1e-31; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 554 - 656
Target Start/End: Original strand, 116063 - 116165
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||||| ||| | | |||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  116063 tcactttagttcctcattctgcagctcgctgtcacataggtccctgactcaggattaaatacaaataagtccctgactatgcacttccgttatcacttta 116162  T
Q  654 gtc 656  Q
    |||    
T  116163 gtc 116165  T

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Target: scaffold0039 (Bit Score: 69; Significance: 2e-30; HSPs: 3)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 558 - 787
Target Start/End: Original strand, 79085 - 79314
Alignment:
Q  558 tttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtct 657  Q
    |||||| ||||||| |||||||||||||||||||| ||| ||||||| ||||||||| ||| |||||  ||||| ||||| |||| ||||||||||||||    
T  79085 tttagttcctgactctgcacctcgctgtcacataggtccttgactcatgattaaataaaaagaagtccttgactttgcacctccgatatcactttagtct 79184  T
Q  658 ctgtcgttaaannnnnnngttaagtgatgatgtggcacttggcttatgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggc 757  Q
     || |||||||       |||||||||||||||| ||| ||  ||| | ||||| |   ||||| || |||| ||||||||| ||||||  |||||||      
T  79185 ttgacgttaaataattttgttaagtgatgatgtgacacatgttttacgatgacatgacatatgaggtctcacagggactaaaatgaaagaagaaaatgat 79284  T
Q  758 cactttggtccctgaatcgaaaatcgatat 787  Q
    |||||||||||||||||  |||||| ||||    
T  79285 cactttggtccctgaataaaaaatcaatat 79314  T

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Target: scaffold0039; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 554 - 668
Target Start/End: Complemental strand, 79798 - 79684
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    |||||||| |||||||||  |||||||| ||| |||||  | ||||||||| ||||||||||||| |||||| |||||||||| |||  |||||| ||||    
T  79798 tcactttaatccctgactcggcacctcgttgttacataagttcctgactcatgattaaatacaaagaagtctttgactctgcatttctattatcatttta 79699  T
Q  654 gtctctgtcgttaaa 668  Q
    |||| || |||||||    
T  79698 gtctttgacgttaaa 79684  T

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Target: scaffold0039; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 558 - 651
Target Start/End: Complemental strand, 74424 - 74331
Alignment:
Q  558 tttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactt 651  Q
    |||||||||||||| |||| ||| ||||||||||| ||||| ||||| ||||||||||||| |||||  ||||||| ||| || | ||||||||    
T  74424 tttagtccctgactctgcaactcactgtcacataggtccctaactcatgattaaatacaaagaagtccttgactctacacctctgatatcactt 74331  T

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Target: scaffold0045 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 426 - 507
Target Start/End: Original strand, 62583 - 62663
Alignment:
Q  426 attggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaa 507  Q
    |||||||||||  |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  62583 attggttaagat-aacataaatagaaataattttttgaaaaatggtgaaaagtgttgaattcaactttctaaaagttaaaaa 62663  T

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Target: scaffold0045; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 426 - 507
Target Start/End: Original strand, 69915 - 69995
Alignment:
Q  426 attggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaa 507  Q
    |||||||||||  |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  69915 attggttaagat-aacataaatagaaataattttttgaaaaatggtgaaaagtgttgaattcaactttctaaaagttaaaaa 69995  T

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Target: scaffold0767 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 554 - 668
Target Start/End: Original strand, 5607 - 5721
Alignment:
Q  554 tcactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcacttta 653  Q
    ||||||||||| || ||| ||||||||| ||| ||| |  || ||||||||| |||||||||||| ||||| |||||||| |||||||||||||||||||    
T  5607 tcactttagtcactcactttgcacctcgttgtgacaaatgtctctgactcagaattaaatacaaagaagtccctgactctacacttccgttatcacttta 5706  T
Q  654 gtctctgtcgttaaa 668  Q
    ||||||| |||||||    
T  5707 gtctctggcgttaaa 5721  T

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Target: scaffold0767; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 558 - 655
Target Start/End: Complemental strand, 6361 - 6264
Alignment:
Q  558 tttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaataagtctctgactctgcacttccgttatcactttagt 655  Q
    |||||||| ||||| ||||| ||||| ||| | || ||| ||| |||| |||||||| ||| || ||  |||| ||| ||||||||||||||||||||    
T  6361 tttagtccttgactctgcacttcgctatcatagaggtccatgattcagaattaaatataaagaaatcgatgacactgtacttccgttatcactttagt 6264  T

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Target: scaffold0169 (Bit Score: 53; Significance: 6e-21; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 439 - 507
Target Start/End: Original strand, 9025 - 9093
Alignment:
Q  439 aacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagttaaaaa 507  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||| |||||    
T  9025 aacataaatagaaataatttgttgaaaaatggtgaaaagtgttgaattcaactttttaaaagtcaaaaa 9093  T

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Target: scaffold0209 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 407 - 501
Target Start/End: Complemental strand, 29441 - 29349
Alignment:
Q  407 taaagagtgtcctttgtgcattggttaagaggaacataaatagaaataatttcttgaaaaatggtgaaaaatgttgaattcaactttctaaaagt 501  Q
    |||||||||||||| |  |||| |||||||| |||||||||| ||||||||| || ||||||||||| ||||||| |||||||||||||||||||    
T  29441 taaagagtgtccttggaacattcgttaagag-aacataaataaaaataatttgttaaaaaatggtgagaaatgtt-aattcaactttctaaaagt 29349  T

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Target: scaffold0237 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 705 - 789
Target Start/End: Original strand, 3106 - 3190
Alignment:
Q  705 gctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatct 789  Q
    |||||||||| | |||| |||||||  ||| ||||||| |||| |||||||| || ||||||| |||||||||||||| ||||||    
T  3106 gctgacaaggtgcatgaggtgtcacaaggattaaagtggaagtagaaaatggtcattttggtctctgaatcgaaaatcaatatct 3190  T

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Target: scaffold0237; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 704 - 789
Target Start/End: Original strand, 1843 - 1928
Alignment:
Q  704 tgctgacaaggagtatgacgtgtcacggggactaaagtgaaagtcgaaaatggccactttggtccctgaatcgaaaatcgatatct 789  Q
    ||||||||||| | |||| ||||| |  | ||||||||| |||| |||||| | || ||||||| |||||||||||||| ||||||    
T  1843 tgctgacaaggtgcatgaggtgtcgcaagaactaaagtggaagtagaaaatagtcattttggtctctgaatcgaaaatcaatatct 1928  T

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Target: scaffold0369 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 604 - 668
Target Start/End: Complemental strand, 9201 - 9137
Alignment:
Q  604 aggattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctgtcgttaaa 668  Q
    |||||||||||||||  ||||||||| | |||||||  ||||||| ||||||||||| |||||||    
T  9201 aggattaaatacaaaatagtctctgaatttgcacttttgttatcagtttagtctctgacgttaaa 9137  T

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Target: scaffold0016 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 543 - 618
Target Start/End: Complemental strand, 36650 - 36574
Alignment:
Q  543 tttgagtaaatt--cactttagtccctgactgtgcacctcgctgtcacatagatccctgactcaggattaaatacaaa 618  Q
    ||||||||||||  ||||||||||||||||  ||||||||| ||||||| || || || |||| ||||||||||||||    
T  36650 tttgagtaaattgtcactttagtccctgaccctgcacctcg-tgtcacaaaggtctctaactcgggattaaatacaaa 36574  T

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