View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2077_low_3 (Length: 372)
Name: NF2077_low_3
Description: NF2077
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2077_low_3 |
 |  |
|
| [»] scaffold0009 (2 HSPs) |
 |  |  |
|
Alignment Details
Target: chr4 (Bit Score: 254; Significance: 1e-141; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 3 - 341
Target Start/End: Complemental strand, 22990586 - 22990246
Alignment:
| Q |
3 |
tggaggatcagagaacaacaaatccgaagcnnnnnnncaacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcgttaagggat |
102 |
Q |
| |
|
|||||||| || |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
22990586 |
tggaggataagtgaacaacaaatccgaagcaaaaaaacaaaataagtgaaccaaaaatacgagcataattatcacacaacataagctttcattaagggat |
22990487 |
T |
 |
| Q |
103 |
agaaacattacataagttactggtacttcataagagtacttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataacagtact |
202 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22990486 |
agaaacattacataagttactggtacttcataagagtacttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataacagtact |
22990387 |
T |
 |
| Q |
203 |
tcatagttacaggtacttcctagattacttcttaatttaaagacaacggaacattacaacattaaagactaaacataacaatacttcatag-tac--atc |
299 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| || |
|
|
| T |
22990386 |
tcatagttacaggtacttcctagattacttcttaatttaaagacaacggaacattacaacattaaagactaaacataacagtacttcatagttactaata |
22990287 |
T |
 |
| Q |
300 |
ctagcttagattacttcttaattcatagtacttcctagctta |
341 |
Q |
| |
|
|| | ||||||||||||||||||||||||| ||||| |||| |
|
|
| T |
22990286 |
ct-tcctagattacttcttaattcatagtacatcctatctta |
22990246 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 3 - 341
Target Start/End: Original strand, 22714639 - 22714979
Alignment:
| Q |
3 |
tggaggatcagagaacaacaaatccgaagcnnnnnnncaacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcgttaagggat |
102 |
Q |
| |
|
|||||||| || |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
22714639 |
tggaggataagtgaacaacaaatccgaagcaaaaaaacaaaataagtgaaccaaaaatacgagcataattatcacacaacataagctttcattaagggat |
22714738 |
T |
 |
| Q |
103 |
agaaacattacataagttactggtacttcataagagtacttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataacagtact |
202 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22714739 |
agaaacattacataagttactggtacttcataagagtacttcatagttactagcactttttagattacttcctaattgaaaggcaaaacataacagtact |
22714838 |
T |
 |
| Q |
203 |
tcatagttacaggtacttcctagattacttcttaatttaaagacaacggaacattacaacattaaagactaaacataacaatacttcatag-tac--atc |
299 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| || |
|
|
| T |
22714839 |
tcatagttacaggtacttcctagattacttcttaatttaaagacaacggaacattacaacattaaagactaaacataacagtacttcatagttactaata |
22714938 |
T |
 |
| Q |
300 |
ctagcttagattacttcttaattcatagtacttcctagctta |
341 |
Q |
| |
|
|| | ||||||||||||||||||||||||| ||||| |||| |
|
|
| T |
22714939 |
ct-tcctagattacttcttaattcatagtacatcctatctta |
22714979 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 4 - 341
Target Start/End: Original strand, 28948897 - 28949236
Alignment:
| Q |
4 |
ggaggatcagagaacaacaaatccgaagcnnnnnnncaacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcgttaagggata |
103 |
Q |
| |
|
||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
28948897 |
ggaggataagtgaacaacaaatccgaagcaaaaaaacaacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcattaagggata |
28948996 |
T |
 |
| Q |
104 |
gaaacattacataagttactggtacttcataagagtacttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataacagtactt |
203 |
Q |
| |
|
|||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28948997 |
gaaacattacataagttatttgtacttcataagagtacttcatagttactagcactttttagattacttcctaattgaaaggcaaaacataacagtactt |
28949096 |
T |
 |
| Q |
204 |
catagttacaggtacttcctagattacttcttaatttaaagacaacggaacattacaacattaaagactaaacataacaatacttcatagtacatccta- |
302 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | || |
|
|
| T |
28949097 |
catagttacaggtacttcctagattacttcttaatttaaagacaacggaacattacaacattaaagactaaacataacagtacttcatagttactattac |
28949196 |
T |
 |
| Q |
303 |
-gcttagattacttcttaattcatagtacttcctagctta |
341 |
Q |
| |
|
| ||||||||||||||||||||||||| |||||||||| |
|
|
| T |
28949197 |
ttcctagattacttcttaattcatagtacatcctagctta |
28949236 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 40 - 346
Target Start/End: Complemental strand, 22697172 - 22696864
Alignment:
| Q |
40 |
caacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcgttaagggatagaaacattacataagttactggtacttcataagagt |
139 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
22697172 |
caacataagtgaaccataaatacgagcataattatcacacaacataagtcttcattaagggatagaaacattacataagttactagtacttcataagagt |
22697073 |
T |
 |
| Q |
140 |
acttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacaggtacttcctagattacttcttaatt |
239 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||| |
|
|
| T |
22697072 |
acttcatagttactaccacttcttagattacttcctaattgaaaggaaaaacataacagtacttcaaagttaccggtacttcctagattacttcttaatt |
22696973 |
T |
 |
| Q |
240 |
taaagacaacggaacattacaacattaaagactaaacataacaatacttcatagtacatccta--gcttagattacttcttaattcatagtacttcctag |
337 |
Q |
| |
|
|||||||||| || |||||||||||||||||||||||| || | ||||||||||| | || | |||||||||||||||||||||||||||||||| |
|
|
| T |
22696972 |
taaagacaacagagcattacaacattaaagactaaacaaaatagtacttcatagttactagtacttcgtagattacttcttaattcatagtacttcctag |
22696873 |
T |
 |
| Q |
338 |
cttacttcc |
346 |
Q |
| |
|
||| |||| |
|
|
| T |
22696872 |
gttaattcc |
22696864 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 40 - 361
Target Start/End: Complemental strand, 46956859 - 46956533
Alignment:
| Q |
40 |
caacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcgttaagggatagaaacattacataagttactggtacttcataagagt |
139 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||||| ||||||||||| ||| |
|
|
| T |
46956859 |
caacataagtgaacaaaaaatacaagcataattatcacacaacataagccttcattaaggtatagaaacattacataagttactagtacttcataatagt |
46956760 |
T |
 |
| Q |
140 |
acttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacaggtacttcctagattacttcttaatt |
239 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |
|
|
| T |
46956759 |
acttcatagttactagcacttcttagattacttcctaattaaaaggcaaaacataacagtacttgatagttactagtacttcctagattacttcttaatt |
46956660 |
T |
 |
| Q |
240 |
taaagacaacggaacattacaacattaaagacta---aacataacaatacttcatagtacatccta--gcttagattacttcttaattcatagtacttcc |
334 |
Q |
| |
|
|||||| || |||||||||||||||||||||||| || |||||| | ||||||||| | || | ||||||||||||||||||||||||||| | |
|
|
| T |
46956659 |
taaagataatggaacattacaacattaaagactaaataatataacagtgcttcatagttactagtacttcctagattacttcttaattcatagtactttc |
46956560 |
T |
 |
| Q |
335 |
tagcttacttcctagtcacacaggttc |
361 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
46956559 |
tagcttacttcctagtcacacaggttc |
46956533 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 287 - 361
Target Start/End: Original strand, 28949216 - 28949290
Alignment:
| Q |
287 |
ttcatagtacatcctagcttagattacttcttaattcatagtacttcctagcttacttcctagtcacacaggttc |
361 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
28949216 |
ttcatagtacatcctagcttagattgcttcttaactcatagtacttcctagcttacttcctagtcacataggttc |
28949290 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 287 - 361
Target Start/End: Original strand, 22714959 - 22715033
Alignment:
| Q |
287 |
ttcatagtacatcctagcttagattacttcttaattcatagtacttcctagcttacttcctagtcacacaggttc |
361 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||| |
|
|
| T |
22714959 |
ttcatagtacatcctatcttagattacttcttaattcatagtacttcctaacttacttcctaatcacagaggttc |
22715033 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 287 - 361
Target Start/End: Complemental strand, 22990266 - 22990192
Alignment:
| Q |
287 |
ttcatagtacatcctagcttagattacttcttaattcatagtacttcctagcttacttcctagtcacacaggttc |
361 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||| |
|
|
| T |
22990266 |
ttcatagtacatcctatcttagattacttcttaattcatagtacttcctaacttacttcctaatcacagaggttc |
22990192 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0009 (Bit Score: 224; Significance: 1e-123; HSPs: 2)
Name: scaffold0009
Description:
Target: scaffold0009; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 3 - 341
Target Start/End: Original strand, 200512 - 200862
Alignment:
| Q |
3 |
tggaggatcagagaacaacaaatccgaagcnnnnnnncaacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcgttaagggat |
102 |
Q |
| |
|
|||||||| || |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
200512 |
tggaggataagtgaacaacaaatccgaagcaaaaaaacaaaataagtgaaccaaaaatacgagcataattatcacacaacataagctttcattaagggat |
200611 |
T |
 |
| Q |
103 |
agaaacattacataagttactggtacttcataagagtacttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataac------ |
196 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |
|
|
| T |
200612 |
agaaacattacataagttactggtacttcataagagtacttcatagttactagcacttcttagattaattcctaattgaaaggaaaaacataacagtact |
200711 |
T |
 |
| Q |
197 |
----agtacttcatagttacaggtacttcctagattacttcttaatttaaagacaacggaacattacaacattaaagactaaacataacaatacttcata |
292 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
200712 |
tcatagtacttcatagttacaggtacttcctagattacttcttaatttaaagacaacggaacattacaacattaaagactaaacataacagtacttcata |
200811 |
T |
 |
| Q |
293 |
gtacatccta--gcttagattacttcttaattcatagtacttcctagctta |
341 |
Q |
| |
|
|| | || | ||||||||||||||||||||||||| |||||||||| |
|
|
| T |
200812 |
gttactattacttcctagattacttcttaattcatagtacatcctagctta |
200862 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0009; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 287 - 361
Target Start/End: Original strand, 200842 - 200916
Alignment:
| Q |
287 |
ttcatagtacatcctagcttagattacttcttaattcatagtacttcctagcttacttcctagtcacacaggttc |
361 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |
|
|
| T |
200842 |
ttcatagtacatcctagcttagattacttcttaattcatagtacttcctagcttacttcctaatcacagaggttc |
200916 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 40 - 361
Target Start/End: Complemental strand, 20087908 - 20087585
Alignment:
| Q |
40 |
caacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcgttaagggatagaaacattacataagttactggtacttcataagagt |
139 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||| ||| |
|
|
| T |
20087908 |
caacataagtgaaccaaaaatacaagcataattatcacacaacataagtcttcattaagggatagaaacattacataagttactagtacttcataatagt |
20087809 |
T |
 |
| Q |
140 |
acttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacaggtacttcctagattacttcttaatt |
239 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |
|
|
| T |
20087808 |
acttcatagttactagtacttcttagattacttcctaattaaaaggcaaaacataacagtacttcatagttactagtactttctagattacttcttaatt |
20087709 |
T |
 |
| Q |
240 |
taaagacaacggaacattacaacattaaagactaaacataacaatacttcatagtacatccta--gcttagattacttcttaattcatagtacttcctag |
337 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||| |||||| ||||||||||| | || | ||||||||||||||||||||| ||||||||| |
|
|
| T |
20087708 |
taaagataacggaacattacaacattaaagactaaatataacagtacttcatagttactagtacttcctagattacttcttaattcataagacttcctag |
20087609 |
T |
 |
| Q |
338 |
cttacttcctagtcacacaggttc |
361 |
Q |
| |
|
||||||||||||||||||| |||| |
|
|
| T |
20087608 |
cttacttcctagtcacacaagttc |
20087585 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 40 - 346
Target Start/End: Complemental strand, 19646606 - 19646298
Alignment:
| Q |
40 |
caacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcgttaagggatagaaacattacataagttactggtacttcataagagt |
139 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
19646606 |
caacataagtgaaccaaaaatacaagcataattatcacacaacataagtcttcattaagggatagaaatattacataagttactggtacttcataagagt |
19646507 |
T |
 |
| Q |
140 |
acttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacaggtacttcctagattacttcttaatt |
239 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| |||||||||||||||||||||||||| |
|
|
| T |
19646506 |
acttcatagttactaccacttcttagattacttcctaattgaaaggaaaaacataacaatacttcaaagttaccggtacttcctagattacttcttaatt |
19646407 |
T |
 |
| Q |
240 |
taaagacaacggaacattacaacattaaagactaaacataacaatacttcatagtacatccta--gcttagattacttcttaattcatagtacttcctag |
337 |
Q |
| |
|
|||||||||| |||||||||||||||||||| ||||||||| | ||||||||||| | || | |||||||||||||||||||||||||||||||| |
|
|
| T |
19646406 |
taaagacaacagaacattacaacattaaagattaaacataagagtacttcatagttactagtacttcgtagattacttcttaattcatagtacttcctag |
19646307 |
T |
 |
| Q |
338 |
cttacttcc |
346 |
Q |
| |
|
|||| |||| |
|
|
| T |
19646306 |
cttaattcc |
19646298 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 206; Significance: 1e-112; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 40 - 346
Target Start/End: Complemental strand, 4344518 - 4344211
Alignment:
| Q |
40 |
caacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcgttaagggatagaaacattacataagttactggtacttcataagagt |
139 |
Q |
| |
|
|||||||||||||| |||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
4344518 |
caacataagtgaacaaaaaatacaagcataattatcacacaacataagtcttcattaagggatagaaacattacataagttactagtacttcataagagt |
4344419 |
T |
 |
| Q |
140 |
acttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacaggtacttcctagattacttcttaatt |
239 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| |||||||||||||||||||||||||| |
|
|
| T |
4344418 |
acttcatagttactaccacttcttagattacttcctaattgaaaggaaaaacataacaatacttcaaagttactggtacttcctagattacttcttaatt |
4344319 |
T |
 |
| Q |
240 |
taaagacaacggaacattacaacattaaagactaaacataacaatacttcatagtacatccta--gcttagattacttcttaattcatagtacttcctag |
337 |
Q |
| |
|
||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||| | || | |||||||||||||||||||||||||||||||| |
|
|
| T |
4344318 |
taaagacaacgaaacatta-aacattaaagactaaacataacagtacttcatagttactagtacttcgtagattacttcttaattcatagtacttcctag |
4344220 |
T |
 |
| Q |
338 |
cttacttcc |
346 |
Q |
| |
|
|||| |||| |
|
|
| T |
4344219 |
cttaattcc |
4344211 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 40 - 346
Target Start/End: Complemental strand, 22808392 - 22808084
Alignment:
| Q |
40 |
caacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcgttaagggatagaaacattacataagttactggtacttcataagagt |
139 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
22808392 |
caacataagtgaaccaaaaatacgagcataattatcacacaacataagtcttcattaagggataaaaaaattacataagttactagtacttcataagagt |
22808293 |
T |
 |
| Q |
140 |
acttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacaggtacttcctagattacttcttaatt |
239 |
Q |
| |
|
||||||| ||||||| |||||||||||||||||||||||||||| | |||| |||| |||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
22808292 |
acttcatggttactaccacttcttagattacttcctaattgaaaagaaaaatataatagtacttcatagttactagtacttcctagattacttcttaatt |
22808193 |
T |
 |
| Q |
240 |
taaagacaacggaacattacaacattaaagactaaacataacaatacttcatagtacatccta--gcttagattacttcttaattcatagtacttcctag |
337 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||| | || | ||||||||||||||||| |||||||||||||| |
|
|
| T |
22808192 |
taaagataacggaacattacaacattaaagactaaacataacaatacttcatagttactagtacttcatagattacttcttaatttatagtacttcctag |
22808093 |
T |
 |
| Q |
338 |
cttacttcc |
346 |
Q |
| |
|
|||| |||| |
|
|
| T |
22808092 |
cttaattcc |
22808084 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 40 - 333
Target Start/End: Original strand, 23362369 - 23362651
Alignment:
| Q |
40 |
caacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcgttaagggatagaaacattacataagttactggtacttcataagagt |
139 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||| ||| |
|
|
| T |
23362369 |
caacataagtgaaccaaaaatacgagcataattatcacacaacataagtcttcattaagggataaaaacattacataagttact-------------agt |
23362455 |
T |
 |
| Q |
140 |
acttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacaggtacttcctagattacttcttaatt |
239 |
Q |
| |
|
||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
23362456 |
acttcatggttactaccacttcttagattacttcctaattgaaaggaaaaacataacagtacttcatagttattagtacttcctagattacttcttaatt |
23362555 |
T |
 |
| Q |
240 |
taaagacaacggaacattacaacattaaagactaaacataacaatacttcatagtacatccta--gcttagattacttcttaattcatagtacttc |
333 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | || | |||||||||||||||||||||||||||| |
|
|
| T |
23362556 |
taaagacaacggaacattacaacattaaagactaaacataacaatacttaatagttactagtacttcgtagattacttcttaattcatagtacttc |
23362651 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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