View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2077_low_6 (Length: 265)
Name: NF2077_low_6
Description: NF2077
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2077_low_6 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 35269543 - 35269796
Alignment:
| Q |
12 |
atgaacaattatgcagttatgcggctcttccaatataccctcaaaaaatggttcatccttacagataaaactacttcagaattttatatcagtgatcaat |
111 |
Q |
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| T |
35269543 |
atgaacagttatgcagttatgcggctcttccaatataccctcaaaaaatggttcatccttactgataaaactacttcagaattttatatcagtgatcaat |
35269642 |
T |
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| Q |
112 |
gctcttaattttttcaaagtttactgaaggtatgatcaaacataatccaaaaactgatactctcctataatagaacgaatgagtatatttttacttgatt |
211 |
Q |
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| T |
35269643 |
gctcttaattttttcaaagtttactgaaggtatgatcaaacataatccaaaaactgatactctcctataatagaacgaatgagtacatttttatttgatt |
35269742 |
T |
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| Q |
212 |
acatcataatttcatgaacatttgcctcaagaaactaacacatttttatttgat |
265 |
Q |
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| T |
35269743 |
acatcataatttcatgaacatttgcctcaagaaactaacacatttttatttgat |
35269796 |
T |
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