View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20783_high_111 (Length: 238)

Name: NF20783_high_111
Description: NF20783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20783_high_111
NF20783_high_111
[»] chr7 (43 HSPs)
chr7 (1-221)||(40991746-40991976)
chr7 (19-73)||(23839097-23839151)
chr7 (19-73)||(31485444-31485498)
chr7 (9-73)||(21054963-21055027)
chr7 (9-73)||(25620146-25620210)
chr7 (9-73)||(34027403-34027467)
chr7 (9-73)||(48243071-48243135)
chr7 (9-65)||(48661565-48661621)
chr7 (10-69)||(26028972-26029031)
chr7 (7-73)||(26239924-26239990)
chr7 (20-73)||(43085558-43085611)
chr7 (9-73)||(2544457-2544521)
chr7 (9-73)||(4886339-4886403)
chr7 (9-73)||(10903095-10903159)
chr7 (9-73)||(29469615-29469679)
chr7 (9-73)||(31257041-31257105)
chr7 (21-73)||(43075332-43075384)
chr7 (21-73)||(43089230-43089282)
chr7 (9-73)||(47710453-47710517)
chr7 (9-73)||(47722109-47722173)
chr7 (1-73)||(47849581-47849653)
chr7 (7-74)||(1596837-1596904)
chr7 (10-73)||(3038095-3038158)
chr7 (10-73)||(6634865-6634928)
chr7 (10-73)||(15317562-15317625)
chr7 (19-74)||(31485679-31485734)
chr7 (10-73)||(40746508-40746571)
chr7 (10-73)||(42985134-42985197)
chr7 (10-73)||(48243448-48243511)
chr7 (19-73)||(18826508-18826562)
chr7 (19-73)||(20305683-20305737)
chr7 (7-57)||(24432148-24432198)
chr7 (7-73)||(30727126-30727192)
chr7 (19-73)||(34027637-34027691)
chr7 (9-73)||(17202189-17202253)
chr7 (9-73)||(21861539-21861603)
chr7 (9-73)||(26562083-26562147)
chr7 (9-73)||(29469850-29469914)
chr7 (9-73)||(32278895-32278959)
chr7 (9-73)||(36277236-36277300)
chr7 (10-54)||(36993085-36993129)
chr7 (9-73)||(44874356-44874420)
chr7 (20-64)||(46452652-46452696)
[»] chr5 (41 HSPs)
chr5 (4-73)||(18333470-18333539)
chr5 (20-73)||(24487666-24487719)
chr5 (9-73)||(24346747-24346811)
chr5 (7-73)||(24346509-24346575)
chr5 (4-73)||(7369734-7369803)
chr5 (9-73)||(15480332-15480396)
chr5 (17-73)||(24270123-24270179)
chr5 (9-73)||(41666767-41666831)
chr5 (9-73)||(41667003-41667067)
chr5 (7-86)||(60085-60163)
chr5 (10-73)||(24528550-24528613)
chr5 (19-73)||(170571-170625)
chr5 (9-73)||(13296902-13296966)
chr5 (9-73)||(17352445-17352509)
chr5 (4-64)||(18333704-18333764)
chr5 (9-73)||(21306897-21306961)
chr5 (9-73)||(21314735-21314799)
chr5 (7-63)||(24269879-24269935)
chr5 (9-65)||(25258104-25258160)
chr5 (9-65)||(25321894-25321950)
chr5 (17-73)||(26137127-26137183)
chr5 (9-73)||(27133003-27133067)
chr5 (10-73)||(9368605-9368668)
chr5 (7-58)||(15480584-15480635)
chr5 (9-87)||(16707035-16707112)
chr5 (20-73)||(24531609-24531662)
chr5 (9-74)||(29909731-29909796)
chr5 (20-73)||(31662670-31662723)
chr5 (9-58)||(38731848-38731897)
chr5 (17-73)||(6413444-6413500)
chr5 (7-63)||(8287821-8287877)
chr5 (9-73)||(12034700-12034764)
chr5 (19-55)||(12151931-12151967)
chr5 (9-73)||(13296683-13296746)
chr5 (9-65)||(18140876-18140932)
chr5 (9-65)||(19522105-19522161)
chr5 (9-53)||(19522350-19522394)
chr5 (9-65)||(25258311-25258367)
chr5 (9-65)||(25322101-25322157)
chr5 (7-63)||(29239932-29239987)
chr5 (9-73)||(37782060-37782124)
[»] chr6 (35 HSPs)
chr6 (7-82)||(20830751-20830826)
chr6 (9-73)||(9705264-9705328)
chr6 (9-73)||(12329954-12330018)
chr6 (7-73)||(27656468-27656534)
chr6 (9-73)||(4868587-4868651)
chr6 (9-73)||(4868823-4868887)
chr6 (9-73)||(8026399-8026463)
chr6 (9-73)||(12330189-12330253)
chr6 (9-73)||(33494549-33494613)
chr6 (10-73)||(2753268-2753331)
chr6 (19-73)||(28867977-28868031)
chr6 (20-73)||(27772956-27773009)
chr6 (9-73)||(6054413-6054477)
chr6 (9-73)||(6542953-6543017)
chr6 (9-65)||(8026622-8026678)
chr6 (9-73)||(11721915-11721979)
chr6 (9-73)||(13353211-13353275)
chr6 (9-73)||(21690732-21690796)
chr6 (9-73)||(30256588-30256652)
chr6 (9-73)||(33796336-33796400)
chr6 (22-73)||(19712724-19712775)
chr6 (19-73)||(7638868-7638922)
chr6 (9-63)||(12330301-12330355)
chr6 (19-73)||(17147680-17147734)
chr6 (19-73)||(25065114-25065168)
chr6 (19-73)||(27772724-27772778)
chr6 (9-63)||(30256832-30256886)
chr6 (7-64)||(6065994-6066051)
chr6 (9-58)||(8566969-8567018)
chr6 (19-63)||(1788969-1789013)
chr6 (9-73)||(6400630-6400694)
chr6 (9-73)||(9705030-9705094)
chr6 (9-73)||(19712962-19713026)
chr6 (9-73)||(27653227-27653291)
chr6 (18-58)||(27993661-27993701)
[»] chr2 (31 HSPs)
chr2 (10-73)||(5509089-5509152)
chr2 (9-73)||(42639624-42639688)
chr2 (9-73)||(2324250-2324314)
chr2 (9-73)||(2324484-2324548)
chr2 (9-73)||(16419512-16419576)
chr2 (17-73)||(16533557-16533613)
chr2 (9-73)||(40379219-40379283)
chr2 (9-73)||(40379454-40379518)
chr2 (19-73)||(32884117-32884171)
chr2 (20-73)||(9927921-9927974)
chr2 (9-73)||(5711449-5711513)
chr2 (9-73)||(17719576-17719640)
chr2 (9-73)||(17854939-17855003)
chr2 (9-73)||(19191620-19191684)
chr2 (9-73)||(28407803-28407867)
chr2 (9-73)||(33606299-33606363)
chr2 (9-73)||(37769953-37770017)
chr2 (7-73)||(17719410-17719476)
chr2 (19-73)||(29718338-29718392)
chr2 (19-72)||(93740-93793)
chr2 (19-64)||(13486353-13486398)
chr2 (28-72)||(93476-93520)
chr2 (9-73)||(1926451-1926515)
chr2 (9-73)||(2029779-2029843)
chr2 (9-73)||(2030014-2030078)
chr2 (9-73)||(14466420-14466484)
chr2 (9-73)||(15124558-15124622)
chr2 (9-73)||(15124793-15124857)
chr2 (9-57)||(27897513-27897561)
chr2 (1-73)||(36352161-36352233)
chr2 (1-73)||(37840347-37840419)
[»] chr1 (34 HSPs)
chr1 (4-86)||(31004442-31004523)
chr1 (4-86)||(31181518-31181599)
chr1 (9-73)||(52907394-52907458)
chr1 (10-65)||(2859638-2859693)
chr1 (10-73)||(52650782-52650845)
chr1 (9-73)||(4113016-4113080)
chr1 (9-73)||(17452689-17452753)
chr1 (9-65)||(25145495-25145551)
chr1 (9-73)||(40079162-40079226)
chr1 (19-73)||(12244982-12245036)
chr1 (19-73)||(15986353-15986407)
chr1 (19-73)||(39348372-39348426)
chr1 (9-73)||(2859402-2859466)
chr1 (9-73)||(3169776-3169840)
chr1 (9-73)||(11924931-11924995)
chr1 (9-73)||(40316060-40316124)
chr1 (9-73)||(51589002-51589066)
chr1 (19-58)||(856006-856045)
chr1 (17-76)||(3170008-3170067)
chr1 (19-73)||(17452848-17452902)
chr1 (9-87)||(29898909-29898986)
chr1 (19-73)||(41035847-41035901)
chr1 (19-73)||(51589236-51589290)
chr1 (9-73)||(4098413-4098476)
chr1 (19-63)||(11525017-11525061)
chr1 (19-63)||(11525232-11525276)
chr1 (9-73)||(26177153-26177217)
chr1 (9-65)||(29265971-29266027)
chr1 (9-73)||(30369845-30369909)
chr1 (9-73)||(35772274-35772338)
chr1 (7-63)||(38080624-38080680)
chr1 (9-73)||(51589816-51589880)
chr1 (19-63)||(52127740-52127784)
chr1 (21-73)||(52676295-52676347)
[»] chr8 (45 HSPs)
chr8 (9-73)||(18939307-18939371)
chr8 (7-73)||(4828303-4828369)
chr8 (4-73)||(38475757-38475826)
chr8 (1-73)||(6559451-6559523)
chr8 (9-73)||(8084137-8084201)
chr8 (9-73)||(17469828-17469892)
chr8 (9-73)||(17477075-17477139)
chr8 (9-73)||(19256596-19256660)
chr8 (9-73)||(19256830-19256894)
chr8 (9-73)||(24075316-24075380)
chr8 (7-65)||(5590376-5590434)
chr8 (19-73)||(8084372-8084426)
chr8 (19-73)||(38447447-38447501)
chr8 (19-73)||(39052949-39053003)
chr8 (4-73)||(8929027-8929096)
chr8 (9-73)||(4828078-4828142)
chr8 (9-73)||(5931959-5932023)
chr8 (4-64)||(6541934-6541994)
chr8 (9-73)||(7267475-7267539)
chr8 (9-73)||(11232204-11232268)
chr8 (9-73)||(11232439-11232503)
chr8 (9-73)||(20301271-20301335)
chr8 (9-73)||(21087903-21087967)
chr8 (7-71)||(26800520-26800584)
chr8 (9-73)||(28069367-28069431)
chr8 (17-73)||(34843127-34843183)
chr8 (9-73)||(35682791-35682855)
chr8 (10-73)||(24532432-24532495)
chr8 (9-72)||(27204975-27205038)
chr8 (9-72)||(27205073-27205136)
chr8 (9-72)||(27205171-27205234)
chr8 (31-86)||(37868615-37868669)
chr8 (9-64)||(39960211-39960266)
chr8 (7-73)||(8466732-8466798)
chr8 (19-73)||(38476287-38476341)
chr8 (23-73)||(42049711-42049761)
chr8 (20-73)||(39984824-39984877)
chr8 (9-58)||(42846615-42846664)
chr8 (9-73)||(5932194-5932258)
chr8 (9-73)||(10614949-10615013)
chr8 (9-73)||(12317056-12317120)
chr8 (9-73)||(36917449-36917513)
chr8 (9-65)||(37001244-37001300)
chr8 (9-73)||(37001474-37001538)
chr8 (9-73)||(39743539-39743603)
[»] chr4 (58 HSPs)
chr4 (9-73)||(22845457-22845521)
chr4 (9-73)||(39902573-39902637)
chr4 (7-73)||(400573-400639)
chr4 (12-70)||(12005482-12005540)
chr4 (20-73)||(35796763-35796816)
chr4 (9-73)||(21498805-21498869)
chr4 (1-73)||(21646267-21646339)
chr4 (9-73)||(22231318-22231382)
chr4 (9-73)||(25052862-25052926)
chr4 (18-73)||(6666219-6666274)
chr4 (18-73)||(44118878-44118933)
chr4 (19-73)||(11783812-11783866)
chr4 (9-71)||(23210069-23210131)
chr4 (19-73)||(28245546-28245600)
chr4 (4-73)||(21041361-21041430)
chr4 (9-73)||(6218214-6218278)
chr4 (9-73)||(9685408-9685472)
chr4 (9-73)||(9685642-9685706)
chr4 (9-73)||(16066075-16066139)
chr4 (9-73)||(21498364-21498428)
chr4 (9-73)||(22827548-22827612)
chr4 (9-73)||(22863484-22863548)
chr4 (7-55)||(28073189-28073237)
chr4 (9-73)||(35788669-35788733)
chr4 (9-73)||(35788904-35788968)
chr4 (9-73)||(36685885-36685949)
chr4 (9-73)||(53814684-53814748)
chr4 (2-73)||(21750045-21750116)
chr4 (6-73)||(35485237-35485304)
chr4 (10-73)||(35609722-35609785)
chr4 (10-73)||(52559577-52559640)
chr4 (19-73)||(1518174-1518228)
chr4 (7-73)||(11036519-11036585)
chr4 (19-73)||(12869049-12869103)
chr4 (19-73)||(17222672-17222726)
chr4 (1-59)||(21750279-21750337)
chr4 (19-73)||(34358050-34358104)
chr4 (9-71)||(50543340-50543402)
chr4 (9-71)||(50543577-50543639)
chr4 (7-73)||(53828531-53828597)
chr4 (8-73)||(19125729-19125794)
chr4 (4-73)||(22822360-22822429)
chr4 (24-73)||(28246110-28246159)
chr4 (20-73)||(35796998-35797051)
chr4 (32-73)||(50816535-50816576)
chr4 (20-73)||(53814950-53815003)
chr4 (19-71)||(2463818-2463870)
chr4 (19-63)||(5398496-5398540)
chr4 (9-73)||(5846156-5846220)
chr4 (1-73)||(11036748-11036820)
chr4 (9-73)||(14783197-14783261)
chr4 (9-65)||(18528467-18528523)
chr4 (31-63)||(19395252-19395284)
chr4 (9-73)||(20821983-20822047)
chr4 (4-64)||(22445471-22445531)
chr4 (9-73)||(35609500-35609564)
chr4 (9-65)||(35819138-35819194)
chr4 (9-73)||(40717451-40717515)
[»] chr3 (48 HSPs)
chr3 (8-73)||(1800225-1800290)
chr3 (9-73)||(1723086-1723150)
chr3 (9-73)||(9273205-9273269)
chr3 (9-73)||(11589795-11589859)
chr3 (9-73)||(20327624-20327688)
chr3 (9-73)||(35038204-35038268)
chr3 (9-73)||(35038438-35038502)
chr3 (9-73)||(54368526-54368590)
chr3 (9-73)||(54567902-54567966)
chr3 (10-73)||(20327860-20327923)
chr3 (7-73)||(8018978-8019044)
chr3 (7-73)||(13574929-13574995)
chr3 (7-65)||(22729118-22729176)
chr3 (23-73)||(23691216-23691266)
chr3 (23-73)||(23708016-23708066)
chr3 (19-73)||(23708244-23708298)
chr3 (23-73)||(23726472-23726522)
chr3 (19-73)||(23726700-23726754)
chr3 (23-73)||(23744928-23744978)
chr3 (19-73)||(23745156-23745210)
chr3 (23-73)||(24063453-24063503)
chr3 (19-73)||(24063681-24063735)
chr3 (19-73)||(45828029-45828083)
chr3 (19-72)||(7697418-7697471)
chr3 (20-73)||(16926970-16927023)
chr3 (7-64)||(34610580-34610637)
chr3 (9-70)||(45138981-45139042)
chr3 (9-73)||(4155334-4155398)
chr3 (9-73)||(20303074-20303138)
chr3 (9-73)||(45138812-45138876)
chr3 (22-73)||(8142430-8142481)
chr3 (7-58)||(13741109-13741160)
chr3 (7-58)||(26272332-26272383)
chr3 (19-73)||(472080-472134)
chr3 (9-63)||(17638254-17638308)
chr3 (7-73)||(20479018-20479084)
chr3 (19-73)||(23610391-23610445)
chr3 (19-73)||(23691444-23691498)
chr3 (20-73)||(1681715-1681768)
chr3 (20-73)||(9272971-9273024)
chr3 (9-58)||(24866222-24866271)
chr3 (9-73)||(6487343-6487407)
chr3 (9-73)||(16239601-16239665)
chr3 (9-73)||(27670402-27670466)
chr3 (10-86)||(45828244-45828319)
chr3 (17-73)||(49629615-49629671)
chr3 (10-73)||(50083091-50083155)
chr3 (17-73)||(50930712-50930768)
[»] scaffold0092 (1 HSPs)
scaffold0092 (9-73)||(5665-5729)
[»] scaffold0334 (1 HSPs)
scaffold0334 (10-73)||(4440-4503)
[»] scaffold0400 (1 HSPs)
scaffold0400 (7-64)||(3864-3921)
[»] scaffold0365 (1 HSPs)
scaffold0365 (7-64)||(4508-4565)
[»] scaffold0766 (1 HSPs)
scaffold0766 (9-73)||(6284-6348)
[»] scaffold0519 (2 HSPs)
scaffold0519 (9-73)||(1926-1990)
scaffold0519 (9-73)||(2161-2225)
[»] scaffold0181 (1 HSPs)
scaffold0181 (20-61)||(20961-21002)
[»] scaffold0692 (1 HSPs)
scaffold0692 (9-73)||(5764-5828)
[»] scaffold0481 (1 HSPs)
scaffold0481 (17-73)||(3489-3545)
[»] scaffold0129 (1 HSPs)
scaffold0129 (9-73)||(14313-14377)
[»] scaffold0048 (1 HSPs)
scaffold0048 (7-71)||(82088-82152)
[»] scaffold0047 (1 HSPs)
scaffold0047 (1-65)||(12665-12729)
[»] scaffold0005 (2 HSPs)
scaffold0005 (9-73)||(56469-56533)
scaffold0005 (10-58)||(288668-288716)


Alignment Details
Target: chr7 (Bit Score: 180; Significance: 2e-97; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 40991746 - 40991976
Alignment:
Q  1 taaaatttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaaacacgtgttcaggttccaatgtggcaa 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  40991746 taaaatttgtggttgagtctaacacaacctcacaaaaccagattgtgagatgaggattacccccacttataaaacacgtgttcaggttccaatgtggcaa 40991845  T
Q  101 tcttaacactacgtaac----------acccacgtttcgataaaagttgtgtccctcatcgacgcatgtaacatttgattattctatttcctcaaattat 190  Q
    |||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  40991846 tcttaacactacgtaacacccacgtttacccacgtttcgataaaagttgtgtccctcatcgacgcatgtaacatttgattattctattttctcaaattat 40991945  T
Q  191 tacgagacataacagtatcatgtctgtgtca 221  Q
    |||||||||||||||||||||||||||||||    
T  40991946 tacgagacataacagtatcatgtctgtgtca 40991976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 23839097 - 23839151
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||||||||||||||| | |||||||||||||||| |||||| |||||||    
T  23839097 ctaacacaacctcacaaaaccggcttgtgaggtgaggatttcccccacttataaa 23839151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 31485444 - 31485498
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||||||||||||||||| |||||| ||||||||| |||||| |||||||    
T  31485444 ctaacacaacctcacaaaaccagtttgtgatgtgaggattgcccccacttataaa 31485498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 21054963 - 21055027
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  21054963 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 21055027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 25620210 - 25620146
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  25620210 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 25620146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 34027467 - 34027403
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  34027467 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 34027403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 48243071 - 48243135
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  48243071 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 48243135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 48661565 - 48661621
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattaccccca 65  Q
    ||||||| ||||||||||| ||||||||||| | |||||||||||||||| ||||||    
T  48661565 gtggttgggtctaacacaatctcacaaaaccggcttgtgaggtgaggattgccccca 48661621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 26028972 - 26029031
Alignment:
Q  10 tggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccattta 69  Q
    |||||| ||||||||||||||||||||| | | |||||||||||||||| | ||||||||    
T  26028972 tggttgggtctaacacaacctcacaaaatcggcttgtgaggtgaggattgctcccattta 26029031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 26239924 - 26239990
Alignment:
Q  7 ttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||| ||||||||||||| ||||| |||   |||||||||||||||| |||||| |||||||    
T  26239924 ttgtggttgggtctaacacaaccccacaataccgacttgtgaggtgaggattgcccccacttataaa 26239990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 43085558 - 43085611
Alignment:
Q  20 taacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||||||| ||||||||||  |||||||||||||||| |||||| |||||||    
T  43085558 taacacaaccccacaaaaccaacttgtgaggtgaggattgcccccacttataaa 43085611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 2544457 - 2544521
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| |||||||||   |||||||||||||||| |||||| |||||||    
T  2544457 gtggttgggcctaacacaaccccacaaaaccgacttgtgaggtgaggattgcccccacttataaa 2544521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 4886403 - 4886339
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||||| | ||||| | |||||||||||||||| |||||||| |||||    
T  4886403 gtggttgggcctaacacaacctcgccaaaccggcttgtgaggtgaggattgcccccattaataaa 4886339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 10903159 - 10903095
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||  ||||||||| | ||||||||||||||||||||| | |||||||    
T  10903159 gtggttggggctaacacaactccacaaaaccggcttgtgaggtgaggattacccctacttataaa 10903095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 29469679 - 29469615
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | |||| ||||||||||| |||||| |||||||    
T  29469679 gtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaa 29469615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 31257041 - 31257105
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| ||||||||||||| ||||||||  | ||||||||||| |||| |||||| |||||||    
T  31257041 gtggttgagtctaacacaaccccacaaaactggtttgtgaggtgaagattgcccccacttataaa 31257105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 43075332 - 43075384
Alignment:
Q  21 aacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||| ||||||||||  |||||||||||||||| |||||| |||||||    
T  43075332 aacacaaccccacaaaaccaacttgtgaggtgaggattgcccccacttataaa 43075384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 43089230 - 43089282
Alignment:
Q  21 aacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||| ||||||||||  |||||||||||||||| |||||| |||||||    
T  43089230 aacacaaccccacaaaaccaacttgtgaggtgaggattgcccccacttataaa 43089282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 47710517 - 47710453
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||  | |||||||||||||||| |||||| |||||||    
T  47710517 gtggttgggcctaacacaaccccacaaaactggcttgtgaggtgaggattgcccccacttataaa 47710453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 47722173 - 47722109
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||  | |||||||||||||||| |||||| |||||||    
T  47722173 gtggttgggcctaacacaaccccacaaaactggcttgtgaggtgaggattgcccccacttataaa 47722109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 47849653 - 47849581
Alignment:
Q  1 taaaatttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||| |||||||||| | ||||||||| | ||||||||| | |||||||||||||||| |||| | |||||||    
T  47849653 taaactttgtggttgagcctaacacaagcccacaaaaccgggttgtgaggtgaggattgccccaacttataaa 47849581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 1596904 - 1596837
Alignment:
Q  7 ttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaaa 74  Q
    ||||||||| | |||||||||||  |||||||| | |||| ||||||||||| |||||| ||||||||    
T  1596904 ttgtggttgggcctaacacaaccctacaaaaccggcttgtaaggtgaggattgcccccacttataaaa 1596837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 3038095 - 3038158
Alignment:
Q  10 tggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||| | ||||||||||| ||||||||| | |||||| ||||||||| |||||| |||||||    
T  3038095 tggttgggcctaacacaaccccacaaaaccggcttgtgacgtgaggattgcccccacttataaa 3038158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 6634928 - 6634865
Alignment:
Q  10 tggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||| | ||||||||||| |||||||| || || ||||||||||||| |||||| |||||||    
T  6634928 tggttgggcctaacacaaccccacaaaactagcttatgaggtgaggattgcccccacttataaa 6634865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 15317625 - 15317562
Alignment:
Q  10 tggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||| | ||||||||||  |||||||| || |||||||||||||||| |||||| |||||||    
T  15317625 tggttgggcctaacacaacaccacaaaactagtttgtgaggtgaggattgcccccacttataaa 15317562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 31485679 - 31485734
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaaa 74  Q
    |||||||||| |||||||||| | |||| ||||||||||| |||||| ||||||||    
T  31485679 ctaacacaacttcacaaaaccggcttgtcaggtgaggattgcccccacttataaaa 31485734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 40746571 - 40746508
Alignment:
Q  10 tggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||| | ||||||||||||||||||||  | |||||||||| ||||| |||||| |||||||    
T  40746571 tggttgggcctaacacaacctcacaaaactggcttgtgaggtgtggatttcccccacttataaa 40746508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 42985134 - 42985197
Alignment:
Q  10 tggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||| ||||||||||||||||||||| |   |||||||||||||||| || ||| |||||||    
T  42985134 tggttgagtctaacacaacctcacaaaatcgacttgtgaggtgaggattgcctccacttataaa 42985197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 48243448 - 48243511
Alignment:
Q  10 tggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||| ||||||||||||| ||||||||| | |||| || |||||||| |||||| |||||||    
T  48243448 tggttgggtctaacacaaccccacaaaaccggcttgtaagatgaggattgcccccacttataaa 48243511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 18826508 - 18826562
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||||| ||||||| ||| ||||||| |||| |||||||||| |||||||    
T  18826508 ctaacacaaccccacaaaatcagcttgtgagttgagaattacccccacttataaa 18826562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 20305683 - 20305737
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||||| |||||||  || |||||||||||||||| |||||| |||||||    
T  20305683 ctaacacaaccccacaaaataagtttgtgaggtgaggattgcccccacttataaa 20305737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 24432198 - 24432148
Alignment:
Q  7 ttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggat 57  Q
    ||||||||| |||||| |||||||||||||| ||| ||||||| |||||||    
T  24432198 ttgtggttgagtctaatacaacctcacaaaatcagcttgtgagatgaggat 24432148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 30727126 - 30727192
Alignment:
Q  7 ttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||| | |||||  ||||  |||||||||| |||||||||||||||| |||||| |||||||    
T  30727126 ttgtggttgggcctaacttaaccgtacaaaaccagcttgtgaggtgaggattgcccccacttataaa 30727192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 34027691 - 34027637
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||||| ||||||||| | |||||| ||||||||| |||||| |||||||    
T  34027691 ctaacacaaccccacaaaaccggcttgtgaagtgaggattgcccccacttataaa 34027637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 17202253 - 17202189
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | ||||||| |||| ||| |||||| |||||||    
T  17202253 gtggttgggcctaacacaaccccacaaaaccggcttgtgagatgagaattgcccccacttataaa 17202189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 21861603 - 21861539
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||| | | |||| ||||||||||| |||||| |||||||    
T  21861603 gtggttgggcctaacacaaccccacaaaatcggcttgtaaggtgaggattgcccccacttataaa 21861539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 26562083 - 26562147
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | |||||| |||| ||||||||| | ||||||||||| |||| |||||| |||||||    
T  26562083 gtggttgagcctaacataaccccacaaaaccggcttgtgaggtgaagattgcccccacttataaa 26562147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 29469914 - 29469850
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||  ||||||||| | |||| ||||||||||| |||||| |||||||    
T  29469914 gtggttgggcctaacacaactccacaaaaccggcttgtaaggtgaggattgcccccacttataaa 29469850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 32278895 - 32278959
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||||||||||||| | || |||||||| ||||  ||||| |||||||    
T  32278895 gtggttgagcctaacacaacctcacaaaaccggcttatgaggtgacgattgtccccacttataaa 32278959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 36277236 - 36277300
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||| |   |||||||||||||||| |||||| |||||||    
T  36277236 gtggttgggactaacacaaccccacaaaatcgacttgtgaggtgaggattgcccccacttataaa 36277300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 36993085 - 36993129
Alignment:
Q  10 tggttgtgtctaacacaacctcacaaaaccagattgtgaggtgag 54  Q
    |||||| | ||||||||||| ||||||||||| ||||||||||||    
T  36993085 tggttgggcctaacacaaccccacaaaaccagcttgtgaggtgag 36993129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 44874356 - 44874420
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | |||||||||||  |||||| | | |||||||||||||||| |||||| |||||||    
T  44874356 gtggttgggcctaacacaaccatacaaaatcggtttgtgaggtgaggatttcccccacttataaa 44874420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 46452696 - 46452652
Alignment:
Q  20 taacacaacctcacaaaaccagattgtgaggtgaggattaccccc 64  Q
    |||||||||| ||||||||||  |||||||||||||||| |||||    
T  46452696 taacacaaccccacaaaaccaacttgtgaggtgaggattgccccc 46452652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 2e-17; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 18333470 - 18333539
Alignment:
Q  4 aatttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||||||||| | ||||||||||| ||||||||| | ||||||||||||||||||||||| |||||||    
T  18333470 aatttgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattacccccacttataaa 18333539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 24487666 - 24487719
Alignment:
Q  20 taacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||||||||||||||||| | ||||||||||||||||||||||| |||||||    
T  24487666 taacacaacctcacaaaaccggcttgtgaggtgaggattacccccacttataaa 24487719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 24346747 - 24346811
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| ||||||||||||| ||||||||| | |||||||||||| |||||||||| |||||||    
T  24346747 gtggttgggtctaacacaaccccacaaaaccggcttgtgaggtgagtattacccccacttataaa 24346811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 24346509 - 24346575
Alignment:
Q  7 ttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||| | ||||||||||| || |||||| | ||||||||||||||||||||||| |||||||    
T  24346509 ttgtggttgagcctaacacaaccccataaaaccggcttgtgaggtgaggattacccccacttataaa 24346575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 7369803 - 7369734
Alignment:
Q  4 aatttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||||||||| | ||||||||||| ||||||||| | |||||||||||||| | |||||| |||||||    
T  7369803 aatttgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggactgcccccacttataaa 7369734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 15480396 - 15480332
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | |||||| |||| ||||||||||| |||||||||||||||| |||||| |||||||    
T  15480396 gtggttgggcctaacagaaccccacaaaaccagcttgtgaggtgaggattgcccccacttataaa 15480332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 24270123 - 24270179
Alignment:
Q  17 gtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||||||| ||||||||| | |||||||||||| |||||||||| |||||||    
T  24270123 gtctaacacaaccccacaaaaccggcttgtgaggtgagtattacccccacttataaa 24270179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 41666767 - 41666831
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  41666767 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 41666831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 41667003 - 41667067
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  41667003 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 41667067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 60163 - 60085
Alignment:
Q  7 ttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaaacacgtgttcagg 86  Q
    ||||| ||| |||||||| |||| ||||||||| | |||||||||||||||| |||||| |||| |||||| ||||||||    
T  60163 ttgtgattgggtctaacataaccccacaaaaccggcttgtgaggtgaggattgcccccacttat-aaacacatgttcagg 60085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 24528613 - 24528550
Alignment:
Q  10 tggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||| | ||||||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  24528613 tggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 24528550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 170571 - 170625
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||||||||||||||| | |||||||||||||| | |||||| |||||||    
T  170571 ctaacacaacctcacaaaaccggcttgtgaggtgaggactgcccccacttataaa 170625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 13296966 - 13296902
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| ||||||||||| | ||||||||| | ||||||||||||| || |||||| |||||||    
T  13296966 gtggttgggtctaacacaatcccacaaaaccggtttgtgaggtgagggttgcccccacttataaa 13296902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 17352445 - 17352509
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||| ||||||||||||||| | ||||||||||| |||| |||||| |||||||    
T  17352445 gtggttgagcctaacgcaacctcacaaaaccggcttgtgaggtgatgattgcccccacttataaa 17352509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 18333704 - 18333764
Alignment:
Q  4 aatttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattaccccc 64  Q
    |||| ||||||| | ||||||||||| ||||||||| | ||||||||||| ||||||||||    
T  18333704 aattcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgacgattaccccc 18333764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 21306961 - 21306897
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| ||||||||||| | ||||| ||| | |||||||||||||||| |||||| |||||||    
T  21306961 gtggttgggtctaacacaatcccacaataccggcttgtgaggtgaggattgcccccacttataaa 21306897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 21314799 - 21314735
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| ||||||||||| | ||||| ||| | |||||||||||||||| |||||| |||||||    
T  21314799 gtggttgggtctaacacaatcccacaataccggcttgtgaggtgaggattgcccccacttataaa 21314735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 24269879 - 24269935
Alignment:
Q  7 ttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccc 63  Q
    ||||||||| | ||||||||||| || |||||| | |||||||||||||||||||||    
T  24269879 ttgtggttgagcctaacacaaccccataaaaccggcttgtgaggtgaggattacccc 24269935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 25258104 - 25258160
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattaccccca 65  Q
    ||||||| | ||||||||||| ||||||||| | |||||||||||||||| ||||||    
T  25258104 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccccca 25258160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 25321894 - 25321950
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattaccccca 65  Q
    ||||||| | ||||||||||| ||||||||| | |||||||||||||||| ||||||    
T  25321894 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccccca 25321950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 26137127 - 26137183
Alignment:
Q  17 gtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||||| |||| ||||||||| | ||||||| |||||||| ||||||||||||||    
T  26137127 gtctaacataaccccacaaaaccggtttgtgagatgaggattgcccccatttataaa 26137183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 27133003 - 27133067
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | |||||||||||||||| ||| || |||||||    
T  27133003 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccctcacttataaa 27133067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 9368668 - 9368605
Alignment:
Q  10 tggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||| | ||||||||||| ||||||||| | |||||||||||||||| || ||| |||||||    
T  9368668 tggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcctccacttataaa 9368605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 15480635 - 15480584
Alignment:
Q  7 ttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggatt 58  Q
    ||||||||| | ||||||||||| ||||||||| | ||||||||||||||||    
T  15480635 ttgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatt 15480584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 16707035 - 16707112
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaaacacgtgttcaggt 87  Q
    ||||||| | |||||||||||   ||||||||| ||||||||| |||||| |||||| |||| |||||| |||||||||    
T  16707035 gtggttgggcctaacacaaccctgcaaaaccagcttgtgaggttaggattgcccccacttat-aaacacatgttcaggt 16707112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 24531662 - 24531609
Alignment:
Q  20 taacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||||||| ||||||| | | |||||||||||||||| |||||| |||||||    
T  24531662 taacacaaccccacaaaatcggcttgtgaggtgaggattgcccccacttataaa 24531609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 29909731 - 29909796
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaaa 74  Q
    ||||||| | ||||||||||  ||||||||| | |||||||||||||||| || ||| ||||||||    
T  29909731 gtggttgggcctaacacaactccacaaaaccggcttgtgaggtgaggattgcctccacttataaaa 29909796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 31662670 - 31662723
Alignment:
Q  20 taacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||||||||||||||||| | |||||||| ||||||  | ||||||||||||    
T  31662670 taacacaacctcacaaaaccggtttgtgaggcgaggatagcacccatttataaa 31662723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 38731848 - 38731897
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggatt 58  Q
    ||||||||| ||||||||||||||||||| |   ||||||||||||||||    
T  38731848 gtggttgtgcctaacacaacctcacaaaatcgacttgtgaggtgaggatt 38731897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 6413444 - 6413500
Alignment:
Q  17 gtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||||||| ||||||| | | || ||||||||||||| |||||| |||||||    
T  6413444 gtctaacacaaccccacaaaatcggcttatgaggtgaggattgcccccacttataaa 6413500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 8287877 - 8287821
Alignment:
Q  7 ttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccc 63  Q
    ||||||||| | ||||||||||| ||||||||| | |||||||||| ||||| ||||    
T  8287877 ttgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtggggattgcccc 8287821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 12034764 - 12034700
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||| |  |||||||  | |||||||||||||||| ||||||||||||||    
T  12034764 gtggttgggcctaacacaatcctacaaaactggcttgtgaggtgaggatttcccccatttataaa 12034700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 12151931 - 12151967
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgagg 55  Q
    ||||||||||||||||||||| | |||||||||||||    
T  12151931 ctaacacaacctcacaaaaccggcttgtgaggtgagg 12151967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 13296746 - 13296683
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||  | |||||||||||||||| |||||| |||||||    
T  13296746 gtggttgggcctaacacaacc-cacaaaactggcttgtgaggtgaggattgcccccacttataaa 13296683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 18140932 - 18140876
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattaccccca 65  Q
    ||||||| |||||| |||| | || |||||||| |||||| ||||||||||||||||    
T  18140932 gtggttgggtctaatacaatcccataaaaccagtttgtgaagtgaggattaccccca 18140876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 19522161 - 19522105
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattaccccca 65  Q
    ||||||| ||| || |||||| ||||||||| | |||||||||||||||| ||||||    
T  19522161 gtggttgggtcaaatacaaccccacaaaaccggcttgtgaggtgaggattgccccca 19522105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 19522394 - 19522350
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtga 53  Q
    ||||||||||||||||||||| ||||||| | | |||||||||||    
T  19522394 gtggttgtgtctaacacaaccccacaaaatcggcttgtgaggtga 19522350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 25258311 - 25258367
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattaccccca 65  Q
    ||||||| || |||||||||| |||||||||   |||||||||||||||| ||||||    
T  25258311 gtggttgagtttaacacaaccccacaaaaccgacttgtgaggtgaggattgccccca 25258367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 25322101 - 25322157
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattaccccca 65  Q
    ||||||| || |||||||||| |||||||||   |||||||||||||||| ||||||    
T  25322101 gtggttgagtttaacacaaccccacaaaaccgacttgtgaggtgaggattgccccca 25322157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 29239987 - 29239932
Alignment:
Q  7 ttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccc 63  Q
    ||||||||| ||||||||||| | ||||||||||  ||||||||||| |||||||||    
T  29239987 ttgtggttgggtctaacacaaacccacaaaacca-tttgtgaggtgatgattacccc 29239932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 37782060 - 37782124
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||| ||||  ||||||||||| ||||||||||| |||| |||||| |||||||    
T  37782060 gtggttgggcctaactcaactccacaaaaccagcttgtgaggtgatgattgcccccacttataaa 37782124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 4e-16; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 82
Target Start/End: Complemental strand, 20830826 - 20830751
Alignment:
Q  7 ttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaaacacgtgtt 82  Q
    ||||| ||| ||||||||||||||||||||| ||| ||||||||||| |||| |||||| ||||||||||| ||||    
T  20830826 ttgtgattgagtctaacacaacctcacaaaatcagtttgtgaggtgatgattgcccccacttataaaacacatgtt 20830751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 9705328 - 9705264
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| ||||||||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  9705328 gtggttgggtctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 9705264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 12329954 - 12330018
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||||||||||| ||| |||||||||||||||| |||||| |||||||    
T  12329954 gtggttgggcctaacacaacctcacaaaatcagcttgtgaggtgaggattgcccccacttataaa 12330018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 27656534 - 27656468
Alignment:
Q  7 ttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||| | ||||||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  27656534 ttgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatttcccccacttataaa 27656468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 4868587 - 4868651
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  4868587 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 4868651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 4868823 - 4868887
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  4868823 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 4868887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 8026463 - 8026399
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  8026463 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 8026399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 12330189 - 12330253
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||||||||||||| | ||||||||||||| || |||||| |||||||    
T  12330189 gtggttgggcctaacacaacctcacaaaaccggcttgtgaggtgagggttgcccccacttataaa 12330253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 33494613 - 33494549
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  33494613 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 33494549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 2753331 - 2753268
Alignment:
Q  10 tggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||| | ||||||||||| |||||||||   ||||||||||||||||||||||| |||||||    
T  2753331 tggttgggcctaacacaaccccacaaaaccgccttgtgaggtgaggattacccccacttataaa 2753268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 28867977 - 28868031
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  28867977 ctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 28868031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 27773009 - 27772956
Alignment:
Q  20 taacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||||| | ||||||||||| |||||||||||||||| |||||| |||||||    
T  27773009 taacacaatcccacaaaaccagcttgtgaggtgaggattgcccccacttataaa 27772956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 6054477 - 6054413
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| |||||||||||||  |||||| | | |||||||||||||||| |||||| |||||||    
T  6054477 gtggttgggtctaacacaaccctacaaaatcggtttgtgaggtgaggattgcccccacttataaa 6054413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 6542953 - 6543017
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| ||||||||||||| ||||||||| | || |||||||| |||| |||||| |||||||    
T  6542953 gtggttgggtctaacacaaccccacaaaaccggcttctgaggtgatgattgcccccacttataaa 6543017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 8026678 - 8026622
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattaccccca 65  Q
    ||||||| | ||||||||||| ||||||||| | |||||||||||||||| ||||||    
T  8026678 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccccca 8026622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 11721979 - 11721915
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | || ||||||||||||| |||||| |||||||    
T  11721979 gtggttgggcctaacacaaccccacaaaaccggcttatgaggtgaggattgcccccacttataaa 11721915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 13353275 - 13353211
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | |||| ||||||||||| |||||| |||||||    
T  13353275 gtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaa 13353211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 21690796 - 21690732
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||| | | |||||||||||||||| |||||| |||||||    
T  21690796 gtggttgagcctaacacaaccccacaaaatcggcttgtgaggtgaggattgcccccacttataaa 21690732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 30256652 - 30256588
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | ||||||| |||||||| |||||| |||||||    
T  30256652 gtggttgggcctaacacaaccccacaaaaccggtttgtgagttgaggattgcccccagttataaa 30256588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 33796400 - 33796336
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | |||| ||||||||||| |||||| |||||||    
T  33796400 gtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaa 33796336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 19712775 - 19712724
Alignment:
Q  22 acacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  19712775 acacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 19712724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 7638868 - 7638922
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||||| ||||||||||| ||||||||||| ||||  || ||||||||||    
T  7638868 ctaacacaaccgcacaaaaccagcttgtgaggtgaagattgtcctcatttataaa 7638922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 12330301 - 12330355
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccc 63  Q
    ||||||| | ||||||||||||||||||||| | ||||||| |||||||| ||||    
T  12330301 gtggttgggcctaacacaacctcacaaaaccggcttgtgagatgaggattgcccc 12330355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 17147680 - 17147734
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||| |||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  17147680 ctaacataaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 17147734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 25065114 - 25065168
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||||| ||||||||| | |||||||||||||||| |||| | |||||||    
T  25065114 ctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccctacttataaa 25065168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 27772778 - 27772724
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||||  ||||||||| | |||||||||||||||| |||||| |||||||    
T  27772778 ctaacacaactccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 27772724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 30256886 - 30256832
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccc 63  Q
    ||||||| | ||||||||||| ||||||||| | |||||||||||||||| ||||    
T  30256886 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccc 30256832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 6066051 - 6065994
Alignment:
Q  7 ttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattaccccc 64  Q
    ||||||||| | ||||||||||| ||||||||||  |||| ||||||||||| |||||    
T  6066051 ttgtggttgggcctaacacaaccccacaaaaccaacttgtcaggtgaggattgccccc 6065994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 8566969 - 8567018
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggatt 58  Q
    ||||||| | ||||||||||| ||||||||| | ||||||||||||||||    
T  8566969 gtggttgggcctaacacaaccccacaaaaccggtttgtgaggtgaggatt 8567018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 1788969 - 1789013
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccc 63  Q
    |||| ||||||||||||||| | |||||||||||| |||||||||    
T  1788969 ctaatacaacctcacaaaacaaaattgtgaggtgaagattacccc 1789013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 6400630 - 6400694
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| ||||||||||||| |||||||||   |||||| ||||||||| || ||| |||||||    
T  6400630 gtggttgggtctaacacaaccccacaaaaccgacttgtgatgtgaggattgcctccacttataaa 6400694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 9705094 - 9705030
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| |||||||||   ||||||||||| |||| |||||| |||||||    
T  9705094 gtggttgggcctaacacaaccccacaaaaccgacttgtgaggtgatgattgcccccacttataaa 9705030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 19713026 - 19712962
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||| | ||||||||| | |||||||||||| ||| |||||| |||||||    
T  19713026 gtggttgggcctaacacaatcccacaaaaccggcttgtgaggtgagaattgcccccacttataaa 19712962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 27653291 - 27653227
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||| | |||||||||   |||||||||||||||| |||||| |||||||    
T  27653291 gtggttgggcctaacacaatcccacaaaaccgacttgtgaggtgaggatttcccccacttataaa 27653227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 27993661 - 27993701
Alignment:
Q  18 tctaacacaacctcacaaaaccagattgtgaggtgaggatt 58  Q
    ||||||||||||||||||||| |  ||||||||||||||||    
T  27993661 tctaacacaacctcacaaaactaagttgtgaggtgaggatt 27993701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 4e-16; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 5509152 - 5509089
Alignment:
Q  10 tggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||| | ||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||    
T  5509152 tggttgggcctaacacaaccccacaaaaccagcttgtgaggtgaggattacccccacttataaa 5509089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 42639624 - 42639688
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| ||||||||||||| ||||||||||| ||||||||||| ||||  |||||||||||||    
T  42639624 gtggttgggtctaacacaaccccacaaaaccagcttgtgaggtgacgattgtccccatttataaa 42639688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 2324314 - 2324250
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  2324314 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 2324250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 2324548 - 2324484
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  2324548 gtggttgagcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 2324484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 16419576 - 16419512
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  16419576 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 16419512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 16533613 - 16533557
Alignment:
Q  17 gtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||||||||||||||||| | |||||| ||||||||| |||||| |||||||    
T  16533613 gtctaacacaacctcacaaaaccggcttgtgaagtgaggattgcccccacttataaa 16533557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 40379219 - 40379283
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  40379219 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 40379283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 40379454 - 40379518
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  40379454 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 40379518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 32884171 - 32884117
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  32884171 ctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 32884117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 9927974 - 9927921
Alignment:
Q  20 taacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||||||| || |||| ||| ||||||||||||||||||||||| |||||||    
T  9927974 taacacaaccccaaaaaatcagcttgtgaggtgaggattacccccacttataaa 9927921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 5711449 - 5711513
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | |||| ||||||||||| |||||| |||||||    
T  5711449 gtggttgggcctaacacaaccccacaaaaccggcttgttaggtgaggattgcccccacttataaa 5711513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 17719640 - 17719576
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | ||||||||| |||||| |||||| |||||||    
T  17719640 gtggttgggcctaacacaaccccacaaaaccggtttgtgaggtcaggattgcccccacttataaa 17719576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 17854939 - 17855003
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| ||||| ||||||| ||||||||| | |||||||||||||||| ||| || |||||||    
T  17854939 gtggttgggtctagcacaaccccacaaaaccggcttgtgaggtgaggattgccctcacttataaa 17855003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 19191620 - 19191684
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | ||||||||||||||||  ||||| |||||||    
T  19191620 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgtccccacttataaa 19191684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 28407803 - 28407867
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||  ||||||||| | |||||||||||||||| |||||| |||||||    
T  28407803 gtggttgggcctaacacaactccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 28407867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 33606299 - 33606363
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||| |||||| |||  ||||||||  | ||||||||||||||||||||||| |||||||    
T  33606299 gtggttgtgcctaacataacgccacaaaactggcttgtgaggtgaggattacccccacttataaa 33606363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 37769953 - 37770017
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| ||||||||||||| ||||||||| | || |||||||| |||| |||||| |||||||    
T  37769953 gtggttgggtctaacacaaccccacaaaaccggcttatgaggtgaagattgcccccacttataaa 37770017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 17719476 - 17719410
Alignment:
Q  7 ttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||| | | |||||||||  |||||||| | |||||||||||||||| |||||| |||||||    
T  17719476 ttgtggttgggccgaacacaacccgacaaaaccggcttgtgaggtgaggattgcccccacttataaa 17719410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 29718392 - 29718338
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||||| ||||||||| | |||||||||||||||| ||| || |||||||    
T  29718392 ctaacacaaccccacaaaaccggcttgtgaggtgaggattgccctcacttataaa 29718338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 93740 - 93793
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataa 72  Q
    ||||| || |||||||||||| | |||||||||||||||| |||||| ||||||    
T  93740 ctaactcatcctcacaaaaccggcttgtgaggtgaggattgcccccacttataa 93793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 13486398 - 13486353
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattaccccc 64  Q
    ||||||||||| ||||||| ||| |||||||||||||||| |||||    
T  13486398 ctaacacaaccccacaaaatcagtttgtgaggtgaggattgccccc 13486353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 93476 - 93520
Alignment:
Q  28 cctcacaaaaccagattgtgaggtgaggattacccccatttataa 72  Q
    |||||||||||| | |||||||||||||||| |||||| ||||||    
T  93476 cctcacaaaaccggcttgtgaggtgaggattgcccccacttataa 93520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 1926451 - 1926515
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||| |  ||||||||   ||||||||||||||||||||||| |||||||    
T  1926451 gtggttgagcctaacacaatcctacaaaaccgatttgtgaggtgaggattacccccacttataaa 1926515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 2029843 - 2029779
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | |||| |||||| ||||||||| | |||||||||||||||| || ||| |||||||    
T  2029843 gtggttgggcctaaaacaaccccacaaaaccggcttgtgaggtgaggattgcctccacttataaa 2029779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 2030078 - 2030014
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | |||| |||||| ||||||||| | |||||||||||||||| || ||| |||||||    
T  2030078 gtggttgggcctaaaacaaccccacaaaaccggcttgtgaggtgaggattgcctccacttataaa 2030014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 14466420 - 14466484
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | |||| ||||||||||| | |||| |||||||    
T  14466420 gtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgctcccacttataaa 14466484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 15124558 - 15124622
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| ||||||||||||| ||||||| | | || ||||||| ||||| |||||| |||||||    
T  15124558 gtggttgggtctaacacaaccccacaaaatcggcttatgaggtggggattgcccccacttataaa 15124622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 15124793 - 15124857
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| ||||||||||||| |||||||||  ||||||| |||| |||| ||| || |||||||    
T  15124793 gtggttgggtctaacacaaccccacaaaaccgaattgtgaagtgaagattgccctcacttataaa 15124857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 27897513 - 27897561
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggat 57  Q
    ||||||| | |||||||||||||| |||||| | |||||||||||||||    
T  27897513 gtggttgagcctaacacaacctcataaaaccggcttgtgaggtgaggat 27897561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 36352161 - 36352233
Alignment:
Q  1 taaaatttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||| |||||||||   ||||||||||| ||||||||| | || |||||||| |||| |||||| |||||||    
T  36352161 taaaaattgtggttgaacctaacacaaccccacaaaaccggcttttgaggtgatgattgcccccacttataaa 36352233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 37840419 - 37840347
Alignment:
Q  1 taaaatttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||| ||||||||| | | ||||||||| ||||||||| | ||||||||||| |||| || ||| |||||||    
T  37840419 taaaaattgtggttgggcccaacacaaccccacaaaaccggcttgtgaggtgatgattgcctccacttataaa 37840347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 31004442 - 31004523
Alignment:
Q  4 aatttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaaacacgtgttcagg 86  Q
    |||||||||||| ||||||| |||||  |||||||||| |||||||||||||||| |||||| |||| |||||| ||||||||    
T  31004442 aatttgtggttgggtctaacgcaacccaacaaaaccagcttgtgaggtgaggattgcccccacttat-aaacacatgttcagg 31004523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 31181518 - 31181599
Alignment:
Q  4 aatttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaaacacgtgttcagg 86  Q
    |||||||||||| | ||||||||||| || |||||||| |||||||||||||||| |||||| |||| |||||| ||||||||    
T  31181518 aatttgtggttgggcctaacacaaccccataaaaccagcttgtgaggtgaggattgcccccacttat-aaacacatgttcagg 31181599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 52907458 - 52907394
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| |||| |||||||| ||||||||||| |||||||||||||||| |||||| |||||||    
T  52907458 gtggttgggtcttacacaaccccacaaaaccagcttgtgaggtgaggattgcccccacttataaa 52907394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 2859638 - 2859693
Alignment:
Q  10 tggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattaccccca 65  Q
    |||||| | ||||||||||||||||||||| | |||||||||||||||||||||||    
T  2859638 tggttggggctaacacaacctcacaaaaccggcttgtgaggtgaggattaccccca 2859693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 52650782 - 52650845
Alignment:
Q  10 tggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||| | ||||||||||| ||||||||||| |||||||||||||||| |||||| |||||||    
T  52650782 tggttgggcctaacacaaccccacaaaaccagcttgtgaggtgaggattgcccccacttataaa 52650845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 4113016 - 4113080
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  4113016 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 4113080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 17452689 - 17452753
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  17452689 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 17452753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 25145495 - 25145551
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattaccccca 65  Q
    ||||||| |||||||||||||||||||||||   |||||||||||||||| ||||||    
T  25145495 gtggttgggtctaacacaacctcacaaaaccgacttgtgaggtgaggattgccccca 25145551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 40079226 - 40079162
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  40079226 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 40079162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 12244982 - 12245036
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  12244982 ctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 12245036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 15986353 - 15986407
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||||| ||||| ||||| |||||||||||||||| |||||| |||||||    
T  15986353 ctaacacaaccccacaataccagcttgtgaggtgaggattgcccccacttataaa 15986407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 39348372 - 39348426
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  39348372 ctaacacaaccccacaaaaccggtttgtgaggtgaggattgcccccacttataaa 39348426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 2859402 - 2859466
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | |||||||||||||||| |||| | ||||||||| |||||| |||||| |||||||    
T  2859402 gtggttgggcctaacacaacctcacagaaccggcttgtgaggtaaggattgcccccacttataaa 2859466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 3169840 - 3169776
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | ||||||||||| |||| |||||| |||||||    
T  3169840 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaagattgcccccacttataaa 3169776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 11924995 - 11924931
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||||||||||||| | |||| ||||||| | |||||||| |||||||    
T  11924995 gtggttgggcctaacacaacctcacaaaaccggtttgtaaggtgagaaatacccccacttataaa 11924931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 40316060 - 40316124
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||||  |||||||||||||||||||||| | || |||||||||||||  ||||| |||||||    
T  40316060 gtggttggatctaacacaacctcacaaaaccggcttatgaggtgaggattgaccccacttataaa 40316124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 51589066 - 51589002
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | |||||||||||||||| ||| || |||||||    
T  51589066 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccctcacttataaa 51589002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 58
Target Start/End: Complemental strand, 856045 - 856006
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggatt 58  Q
    ||||||||| ||||||||||||| ||||||||||||||||    
T  856045 ctaacacaatctcacaaaaccagcttgtgaggtgaggatt 856006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 3170067 - 3170008
Alignment:
Q  17 gtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaaaca 76  Q
    ||||||||||||| ||||||||| | ||||||||| |||||| ||| || ||||||||||    
T  3170067 gtctaacacaaccccacaaaaccggcttgtgaggtaaggattgccctcacttataaaaca 3170008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 17452848 - 17452902
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||||| ||||||||| | ||||||||||| |||| |||||| |||||||    
T  17452848 ctaacacaaccccacaaaaccggcttgtgaggtgaagattgcccccacttataaa 17452902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 29898986 - 29898909
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaaacacgtgttcaggt 87  Q
    ||||||| | ||| ||||||||||||||||| | ||||| |||||| ||| ||| || |||| ||||||||||||||||    
T  29898986 gtggttgggcctagcacaacctcacaaaaccggcttgtgtggtgagaattgccctcacttat-aaacacgtgttcaggt 29898909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 41035847 - 41035901
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||| | ||||||||| | |||||||||||||||| |||||| |||||||    
T  41035847 ctaacacaatcccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 41035901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 51589290 - 51589236
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||||| ||||||||| | |||||||||||||||| ||| || |||||||    
T  51589290 ctaacacaaccccacaaaaccggcttgtgaggtgaggattgccctcacttataaa 51589236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 4098413 - 4098476
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||||  |||| ||||||||||| |||||| |||||||    
T  4098413 gtggttgggcctaacacaacc-cacaaaaccaacttgtaaggtgaggattgcccccacttataaa 4098476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 11525061 - 11525017
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccc 63  Q
    ||||||||||||||||||||| ||||||| |||||| ||| ||||    
T  11525061 ctaacacaacctcacaaaaccggattgtggggtgagcattgcccc 11525017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 11525276 - 11525232
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccc 63  Q
    ||||||||||||||||||||| ||||||| |||||| ||| ||||    
T  11525276 ctaacacaacctcacaaaaccggattgtggggtgagcattgcccc 11525232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 26177217 - 26177153
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||  | || ||||||||||||| |||||| |||||||    
T  26177217 gtggttgggcctaacacaaccccacaaaactggtttttgaggtgaggattgcccccacttataaa 26177153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 29266027 - 29265971
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattaccccca 65  Q
    ||||||| | ||||||||||| ||||||||||| |||| ||||||| ||| ||||||    
T  29266027 gtggttgggcctaacacaaccccacaaaaccagcttgtaaggtgagtattgccccca 29265971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 30369909 - 30369845
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| |||||||| |  |||||||||||||||| |||| | |||||||    
T  30369909 gtggttgggcctaacacaaccccacaaaactatcttgtgaggtgaggattgcccctacttataaa 30369845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 35772338 - 35772274
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | || |||||| |||||| |||||| |||||||    
T  35772338 gtggttgggcctaacacaaccccacaaaaccggcttctgaggtaaggattgcccccacttataaa 35772274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 38080680 - 38080624
Alignment:
Q  7 ttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccc 63  Q
    ||||||||| | ||||||||||| ||||||||  | |||||||||||||||| ||||    
T  38080680 ttgtggttgggcctaacacaaccccacaaaactggcttgtgaggtgaggattgcccc 38080624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 51589880 - 51589816
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||| | | |||||||||||||||| ||| || |||||||    
T  51589880 gtggttgggcctaacacaaccccacaaaatcggcttgtgaggtgaggattgccctcacttataaa 51589816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 52127784 - 52127740
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccc 63  Q
    ||||||||||| ||||||| ||| |||||||||||||||| ||||    
T  52127784 ctaacacaaccccacaaaagcagcttgtgaggtgaggattgcccc 52127740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 52676295 - 52676347
Alignment:
Q  21 aacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||||||||||||| | || |||||| | ||||||||||| |||||||    
T  52676295 aacacaacctcacaaaaccggtttttgaggtcatgattacccccacttataaa 52676347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 18939307 - 18939371
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||||||||||| ||| |||||||||||||||| |||||| |||||||    
T  18939307 gtggttgggcctaacacaacctcacaaaatcagcttgtgaggtgaggattgcccccacttataaa 18939371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 4828369 - 4828303
Alignment:
Q  7 ttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||| | ||||||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  4828369 ttgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 4828303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 38475826 - 38475757
Alignment:
Q  4 aatttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||||||||| | |||||||||||  |||||||| | |||||||||||||||| |||||| |||||||    
T  38475826 aatttgtggttgggcctaacacaaccctacaaaaccggcttgtgaggtgaggattgcccccacttataaa 38475757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 6559451 - 6559523
Alignment:
Q  1 taaaatttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||||||||| | | |||| |||||||||||||| | |||| ||||||||||| |||||| |||||||    
T  6559451 taaaatttgtggttgggacgaacataacctcacaaaaccggcttgtaaggtgaggattgcccccacttataaa 6559523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 8084201 - 8084137
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| ||||||||||||  | ||||||||| |||||||||||||||| |||||| |||||||    
T  8084201 gtggttgggtctaacacaactccgcaaaaccagcttgtgaggtgaggattgcccccacttataaa 8084137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 17469892 - 17469828
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  17469892 gtggttgagcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 17469828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 17477139 - 17477075
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  17477139 gtggttgagcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 17477075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 19256596 - 19256660
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  19256596 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 19256660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 19256830 - 19256894
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  19256830 gtggttgggcctaacacaaccccacaaaacctgcttgtgaggtgaggattgcccccacttataaa 19256894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 24075316 - 24075380
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  24075316 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 24075380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 5590376 - 5590434
Alignment:
Q  7 ttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattaccccca 65  Q
    ||||||||| | ||||||||||||||||||||| | |||||| ||||||||| ||||||    
T  5590376 ttgtggttgggcctaacacaacctcacaaaaccggcttgtgaagtgaggattgccccca 5590434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 8084426 - 8084372
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||||||||||||||  | ||||||||||||| ||||||||| |||||||    
T  8084426 ctaacacaacctcacaaaactggtttgtgaggtgaggtttacccccacttataaa 8084372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 38447447 - 38447501
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  38447447 ctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 38447501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 39052949 - 39053003
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  39052949 ctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 39053003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 8929096 - 8929027
Alignment:
Q  4 aatttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||| ||||||| | ||||||||||| ||||||||| | |||||||||| ||||| |||||| |||||||    
T  8929096 aattcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgcggattgcccccagttataaa 8929027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 4828142 - 4828078
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | ||||||||||||||||  ||||| |||||||    
T  4828142 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgtccccacttataaa 4828078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 5931959 - 5932023
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | |||||| |||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  5931959 gtggttgggcctaacataaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 5932023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 6541994 - 6541934
Alignment:
Q  4 aatttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattaccccc 64  Q
    |||||| ||||| | ||||||||| | ||||||||| | ||||||||||||||||||||||    
T  6541994 aatttgcggttgggcctaacacaaacccacaaaaccggcttgtgaggtgaggattaccccc 6541934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 7267475 - 7267539
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| |||||||||||||  |||||||| | ||||||||||| |||| |||||| |||||||    
T  7267475 gtggttgggtctaacacaaccctacaaaaccggcttgtgaggtgatgattgcccccacttataaa 7267539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 11232204 - 11232268
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | |||| ||||||||||| |||||| |||||||    
T  11232204 gtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaa 11232268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 11232439 - 11232503
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | |||| ||||||||||| |||||| |||||||    
T  11232439 gtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaa 11232503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 20301335 - 20301271
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||||||||||||  | ||||||||| |||||| |||||| |||||||    
T  20301335 gtggttgggcctaacacaacctcacaaaacgggcttgtgaggttaggattgcccccacttataaa 20301271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 21087967 - 21087903
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||||||||||||  | ||||||||| |||||| |||||| |||||||    
T  21087967 gtggttgggcctaacacaacctcacaaaacgggcttgtgaggttaggattgcccccacttataaa 21087903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 26800520 - 26800584
Alignment:
Q  7 ttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttata 71  Q
    ||||||||| | ||||||||||| ||||||||| | ||||| |||||||||| |||||| |||||    
T  26800520 ttgtggttgggcctaacacaaccccacaaaaccggcttgtgtggtgaggattgcccccacttata 26800584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 28069367 - 28069431
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||||  |||||||||||  ||||||| ||| |||||||||||||||| |||||| |||||||    
T  28069367 gtggttggatctaacacaactccacaaaatcagtttgtgaggtgaggattgcccccacttataaa 28069431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 34843183 - 34843127
Alignment:
Q  17 gtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||||||| ||||||||| | |||||||||||||||| | |||| |||||||    
T  34843183 gtctaacacaaccccacaaaaccggcttgtgaggtgaggattgctcccacttataaa 34843127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 35682791 - 35682855
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | ||| |||||||||||| |||||| |||||||    
T  35682791 gtggttgggcctaacacaaccccacaaaaccggcttgcgaggtgaggattgcccccacttataaa 35682855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 24532432 - 24532495
Alignment:
Q  10 tggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||| | ||||||||||| ||||||||| | ||||||||||| |||| |||||| |||||||    
T  24532432 tggttgggcctaacacaaccccacaaaaccggcttgtgaggtgatgattgcccccacttataaa 24532495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 27205038 - 27204975
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataa 72  Q
    ||||||| | ||||||||||| ||||||||| | || ||||||||||||| |||||| ||||||    
T  27205038 gtggttgggcctaacacaaccccacaaaaccggcttatgaggtgaggattgcccccacttataa 27204975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 27205136 - 27205073
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataa 72  Q
    ||||||| | ||||||||||| ||||||||| | || ||||||||||||| |||||| ||||||    
T  27205136 gtggttgggcctaacacaaccccacaaaaccggcttatgaggtgaggattgcccccacttataa 27205073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 27205234 - 27205171
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataa 72  Q
    ||||||| | ||||||||||| ||||||||| | || ||||||||||||| |||||| ||||||    
T  27205234 gtggttgggcctaacacaaccccacaaaaccggcttatgaggtgaggattgcccccacttataa 27205171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 86
Target Start/End: Original strand, 37868615 - 37868669
Alignment:
Q  31 cacaaaaccagattgtgaggtgaggattacccccatttataaaacacgtgttcagg 86  Q
    ||||||||||| |||||||||||||||| |||||||| || |||||| ||||||||    
T  37868615 cacaaaaccagcttgtgaggtgaggattgcccccattaat-aaacacatgttcagg 37868669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 39960266 - 39960211
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattaccccc 64  Q
    ||||||| | ||||||||||| ||||||||| | |||||||||||||||| |||||    
T  39960266 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccccc 39960211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 8466732 - 8466798
Alignment:
Q  7 ttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||| |||  |||||||| || |||||||| ||||||||||||||||  ||||| |||||||    
T  8466732 ttgtggttgggtcgtacacaaccccataaaaccagcttgtgaggtgaggattgtccccacttataaa 8466798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 38476341 - 38476287
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||||| ||||||| | | |||||||||||||||| |||||| |||||||    
T  38476341 ctaacacaaccccacaaaatcggcttgtgaggtgaggatttcccccacttataaa 38476287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 42049711 - 42049761
Alignment:
Q  23 cacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||||||||||| | ||||| |||||||||| |||||| |||||||    
T  42049711 cacaacctcacaaaaccggcttgtggggtgaggattgcccccacttataaa 42049761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 39984877 - 39984824
Alignment:
Q  20 taacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||||||| ||||||||  | |||||||||||||||| |||||| |||||||    
T  39984877 taacacaaccccacaaaactggcttgtgaggtgaggattgcccccacttataaa 39984824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 42846615 - 42846664
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggatt 58  Q
    ||||||| | ||||||||||| ||||||||| | ||||||||||||||||    
T  42846615 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatt 42846664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 5932194 - 5932258
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||  | ||||||||||||| || |||||| |||||||    
T  5932194 gtggttgggcctaacacaaccccacaaaacaggcttgtgaggtgaggcttgcccccacttataaa 5932258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 10614949 - 10615013
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | |||| |||||| ||||||| | | ||||||||||| |||||||||||||| ||||    
T  10614949 gtggttgagcctaatacaaccccacaaaatcggcttgtgaggtgaagattacccccatttgtaaa 10615013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 12317120 - 12317056
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||| | ||||||| ||| || ||||||||||||| |||||| |||||||    
T  12317120 gtggttgggcctaacacaatcccacaaaatcagcttatgaggtgaggattgcccccacttataaa 12317056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 36917449 - 36917513
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||||||  |||||||||| ||||||||    |||||| |||||||||||||||| |||||||    
T  36917449 gtggttgtgcttaacacaaccccacaaaactgacttgtgatgtgaggattacccccacttataaa 36917513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 37001300 - 37001244
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattaccccca 65  Q
    ||||||| | ||||||||||  ||||||||| | |||||||||||||||| ||||||    
T  37001300 gtggttgggcctaacacaactccacaaaaccggcttgtgaggtgaggattgccccca 37001244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 37001538 - 37001474
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | |||||| |||||||||  ||||| |||||||    
T  37001538 gtggttgggcctaacacaaccccacaaaaccggcttgtgatgtgaggattgtccccacttataaa 37001474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 39743603 - 39743539
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||| | | |||||||||||||||| |||| | |||||||    
T  39743603 gtggttgggcctaacacaaccccacaaaatcggcttgtgaggtgaggattgccccaacttataaa 39743539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 22845457 - 22845521
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | ||||||||||||||||||||||| |||||||    
T  22845457 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattacccccacttataaa 22845521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 39902573 - 39902637
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||||| |||||||||||||||| |||||| |||||||    
T  39902573 gtggttgggcctaacacaaccccacaaaaccagcttgtgaggtgaggattgcccccacttataaa 39902637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 400573 - 400639
Alignment:
Q  7 ttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||| |  |||||||||||||||||||| | |||||||||||||||| |||||| |||||||    
T  400573 ttgtggttgagcttaacacaacctcacaaaaccggcttgtgaggtgaggatttcccccacttataaa 400639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 12005482 - 12005540
Alignment:
Q  12 gttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttat 70  Q
    |||| ||||||||||||||||||||||| | |||||||||||||||| |||||| ||||    
T  12005482 gttgggtctaacacaacctcacaaaaccggcttgtgaggtgaggattgcccccacttat 12005540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 35796763 - 35796816
Alignment:
Q  20 taacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||||||||||||||||| | |||||||||||||||| |||||| |||||||    
T  35796763 taacacaacctcacaaaaccggcttgtgaggtgaggattgcccccacttataaa 35796816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 21498869 - 21498805
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  21498869 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 21498805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 21646267 - 21646339
Alignment:
Q  1 taaaatttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||| ||||||||  |||||||||||| |||||||||  | |||| ||||||||||| ||||||||||||||    
T  21646267 taaaaattgtggttaggtctaacacaacatcacaaaactggcttgtaaggtgaggattgcccccatttataaa 21646339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 22231318 - 22231382
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  22231318 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 22231382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 25052926 - 25052862
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | |||||||||| |||||||||||| |||||||    
T  25052926 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgcggattacccccacttataaa 25052862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 6666219 - 6666274
Alignment:
Q  18 tctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  6666219 tctaacacaaccccacaaaacctgtttgtgaggtgaggattgcccccaattataaa 6666274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 44118878 - 44118933
Alignment:
Q  18 tctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||||||||| ||||||||  | ||||||||||||||||||||||| |||||||    
T  44118878 tctaacacaaccccacaaaacgggcttgtgaggtgaggattacccccacttataaa 44118933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 11783812 - 11783866
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||||| ||||||||||  ||||||||||||||||||||| | |||||||    
T  11783812 ctaacacaaccccacaaaaccaatttgtgaggtgaggattacccctacttataaa 11783866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 23210131 - 23210069
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttata 71  Q
    |||||| ||||||||| ||| |||||||||| | |||||||||||| |||||||||| |||||    
T  23210131 gtggttatgtctaacataacatcacaaaaccggcttgtgaggtgagaattacccccacttata 23210069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 28245546 - 28245600
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  28245546 ctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 28245600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 21041430 - 21041361
Alignment:
Q  4 aatttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||||||||||| |||||| ||| || ||||||| | ||||||||||||||||  ||||| |||||||    
T  21041430 aatttgtggttgtgcctaacataacttcgcaaaaccggtttgtgaggtgaggattttccccacttataaa 21041361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 6218278 - 6218214
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||||||||||||||  |||||||||   ||||||||||| |||| |||||| |||||||    
T  6218278 gtggttgtgtctaacacaactccacaaaaccgtcttgtgaggtgaagattgcccccacttataaa 6218214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 9685472 - 9685408
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | |||||||||||||||||||||   ||||||||||||||||  ||||| |||||||    
T  9685472 gtggttgggcctaacacaacctcacaaaaccgacttgtgaggtgaggattggccccacttataaa 9685408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 9685706 - 9685642
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| || |||||| | |||||||||||||||| |||||| |||||||    
T  9685706 gtggttgggcctaacacaaccccataaaaccggcttgtgaggtgaggattgcccccacttataaa 9685642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 16066139 - 16066075
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||| |  |||||||||| |||||||||||||||| |||||| |||||||    
T  16066139 gtggttgggcctaacacaatcctacaaaaccagtttgtgaggtgaggattgcccccacttataaa 16066075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 21498428 - 21498364
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | |||||| |||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  21498428 gtggttgggcctaacataaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 21498364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 22827612 - 22827548
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | |||||||||||  |||||||| | |||||||||||||||| |||||| |||||||    
T  22827612 gtggttgggcctaacacaacccgacaaaaccggcttgtgaggtgaggattgcccccacttataaa 22827548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 22863548 - 22863484
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | ||||| |||||||||| |||||| |||||||    
T  22863548 gtggttgggcctaacacaaccccacaaaaccggcttgtggggtgaggattgcccccacttataaa 22863484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 28073189 - 28073237
Alignment:
Q  7 ttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgagg 55  Q
    ||||||||| | ||||||||||| ||||||||||| |||||||||||||    
T  28073189 ttgtggttgggcctaacacaaccccacaaaaccagcttgtgaggtgagg 28073237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 35788733 - 35788669
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| || |||||| | |||||||||||||||| |||||| |||||||    
T  35788733 gtggttgggcctaacacaaccccataaaaccggcttgtgaggtgaggattgcccccacttataaa 35788669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 35788968 - 35788904
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | ||||||| |||||||| |||||| |||||||    
T  35788968 gtggttgggcctaacacaaccccacaaaaccggcttgtgagatgaggattgcccccacttataaa 35788904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 36685885 - 36685949
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| |||||| |||||| ||||||||    ||||||||||||||| |||||||||||||||    
T  36685885 gtggttgggtctaatacaaccccacaaaactgacttgtgaggtgaggataacccccatttataaa 36685949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 53814684 - 53814748
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||| | ||||||||| | ||||||||||||||||| ||||| |||||||    
T  53814684 gtggttgggcctaacacaatcccacaaaaccggcttgtgaggtgaggattatccccacttataaa 53814748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 21750045 - 21750116
Alignment:
Q  2 aaaatttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||| ||||||||| |||||||| |||| ||||||||| | |||||||||||||| | | |||| |||||||    
T  21750045 aaaaattgtggttgagtctaacataaccccacaaaaccggcttgtgaggtgaggaatgctcccacttataaa 21750116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 73
Target Start/End: Complemental strand, 35485304 - 35485237
Alignment:
Q  6 tttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||| |||| ||||||||||||| |||||||||||  ||| ||||||||| | |||||| |||||||    
T  35485304 tttgtagttgggtctaacacaaccccacaaaaccagcgtgtaaggtgaggactgcccccacttataaa 35485237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 35609722 - 35609785
Alignment:
Q  10 tggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||| |||| |||||||| ||||||||| | ||||||||||||||||  ||||| |||||||    
T  35609722 tggttgggtcttacacaaccccacaaaaccggcttgtgaggtgaggattggccccacttataaa 35609785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 52559640 - 52559577
Alignment:
Q  10 tggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||| | ||||||||||| ||||||||| | ||||||||||| |||| |||||| |||||||    
T  52559640 tggttgggcctaacacaaccccacaaaaccggcttgtgaggtgatgattgcccccacttataaa 52559577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 1518228 - 1518174
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||||| ||||||||| | ||||||| |||||||| |||||| |||||||    
T  1518228 ctaacacaaccccacaaaaccggcttgtgagctgaggattgcccccacttataaa 1518174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 11036519 - 11036585
Alignment:
Q  7 ttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||| ||||||||||||| | ||||||| | ||||||||||| |||| |||| | |||||||    
T  11036519 ttgtggttgggtctaacacaaccccgcaaaaccggcttgtgaggtgatgattgccccaacttataaa 11036585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 12869049 - 12869103
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||||| ||||||||| | ||||||||||| |||| |||||| |||||||    
T  12869049 ctaacacaaccccacaaaaccggcttgtgaggtgatgattgcccccacttataaa 12869103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 17222672 - 17222726
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||||| ||| |||||||| | |||||||||||||||| |||||| |||||||    
T  17222672 ctaacacatccttacaaaaccggcttgtgaggtgaggattgcccccacttataaa 17222726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 21750279 - 21750337
Alignment:
Q  1 taaaatttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggatta 59  Q
    ||||||| ||| ||| ||||||||||||||||||||||  | |||||||||||| ||||    
T  21750279 taaaattcgtgattgggtctaacacaacctcacaaaactggtttgtgaggtgagaatta 21750337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 34358050 - 34358104
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||||| ||||||||| | || ||| ||||||||| ||||||||||||||    
T  34358050 ctaacacaaccccacaaaaccggcttctgatgtgaggattgcccccatttataaa 34358104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 50543340 - 50543402
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttata 71  Q
    ||||||| | ||||||||||| ||||||||| | ||||| |||||||||| |||||| |||||    
T  50543340 gtggttgggcctaacacaaccccacaaaaccggcttgtggggtgaggattgcccccacttata 50543402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 50543577 - 50543639
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttata 71  Q
    ||||||| | ||||||||||  ||||||||| | |||||||||||||||| |||||| |||||    
T  50543577 gtggttgggcctaacacaactccacaaaaccggcttgtgaggtgaggattgcccccacttata 50543639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 53828531 - 53828597
Alignment:
Q  7 ttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||| | ||||||||||| ||||||| | | || ||||||||||||| |||||| |||||||    
T  53828531 ttgtggttgggcctaacacaaccccacaaaatcggcttatgaggtgaggattgcccccacttataaa 53828597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 19125794 - 19125729
Alignment:
Q  8 tgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||||| |||| |||||||||||||||||| | || | |||||| ||||||  |||||||||||    
T  19125794 tgtggttgggtcttacacaacctcacaaaaccggcttttaaggtgatgattacatccatttataaa 19125729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 22822429 - 22822360
Alignment:
Q  4 aatttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||||||   |||| |||||| ||||||||| | ||||| |||||||||| |||||| |||||||    
T  22822429 aatttgtggttggacctaatacaaccgcacaaaaccggcttgtgtggtgaggatttcccccacttataaa 22822360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 28246110 - 28246159
Alignment:
Q  24 acaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  28246110 acaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 28246159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 35796998 - 35797051
Alignment:
Q  20 taacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||||||| ||||||||  | |||||||||||||||| |||||| |||||||    
T  35796998 taacacaaccccacaaaactggtttgtgaggtgaggattgcccccacttataaa 35797051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 50816535 - 50816576
Alignment:
Q  32 acaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||||||| |||| ||||||||||| ||||||||||||||    
T  50816535 acaaaaccagcttgtaaggtgaggattgcccccatttataaa 50816576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 53814950 - 53815003
Alignment:
Q  20 taacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||||||| |||||||||   |||||||||||||||| |||||| |||||||    
T  53814950 taacacaaccccacaaaaccgacttgtgaggtgaggattgcccccacttataaa 53815003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 2463870 - 2463818
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttata 71  Q
    ||||||||||| ||||||||| | ||||||||| |||||| |||||| |||||    
T  2463870 ctaacacaaccccacaaaaccggcttgtgaggtaaggattgcccccacttata 2463818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 5398496 - 5398540
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccc 63  Q
    ||||||||||| ||||||||| | |||||||||||||||| ||||    
T  5398496 ctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccc 5398540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 5846220 - 5846156
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||| ||||| ||||||||| | || ||||||||||||| |||||| |||||||    
T  5846220 gtggttgagcctaacgcaaccccacaaaaccggcttatgaggtgaggattgcccccacttataaa 5846156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 11036748 - 11036820
Alignment:
Q  1 taaaatttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||| ||||||||  | ||||||||||| |||| || | | |||||||||||||||| |||||| |||||||    
T  11036748 taaaaattgtggttaggcctaacacaaccccacacaatcggcttgtgaggtgaggattgcccccacttataaa 11036820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 14783197 - 14783261
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | ||||||||||| |||| ||| || |||||||    
T  14783197 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgatgattgcccacagttataaa 14783261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 18528467 - 18528523
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattaccccca 65  Q
    ||||||| |||||||| || |||||||||||   |||||||||||||||| ||||||    
T  18528467 gtggttgggtctaacaaaatctcacaaaaccgatttgtgaggtgaggattgccccca 18528523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 63
Target Start/End: Original strand, 19395252 - 19395284
Alignment:
Q  31 cacaaaaccagattgtgaggtgaggattacccc 63  Q
    ||||||||||| |||||||||||||||||||||    
T  19395252 cacaaaaccagcttgtgaggtgaggattacccc 19395284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 20822047 - 20821983
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||| | ||||||||| | |||||||||||| ||| |||||| |||||||    
T  20822047 gtggttgggcctaacacaatcccacaaaaccggcttgtgaggtgagaattgcccccacttataaa 20821983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 22445531 - 22445471
Alignment:
Q  4 aatttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattaccccc 64  Q
    |||||||||||| ||||||||||||| |||||||||   ||||  |||||||||| |||||    
T  22445531 aatttgtggttgggtctaacacaaccccacaaaaccgacttgtagggtgaggattgccccc 22445471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 35609500 - 35609564
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| || | |||||||| |||||||||   |||||||||||||||| |||||| |||||||    
T  35609500 gtggttgggtgttacacaaccccacaaaaccgacttgtgaggtgaggattgcccccacttataaa 35609564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 35819138 - 35819194
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattaccccca 65  Q
    ||||||| | ||||||||||||||||||||  | |||||||| ||||||| ||||||    
T  35819138 gtggttgggcctaacacaacctcacaaaactggcttgtgaggcgaggattgccccca 35819194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 40717451 - 40717515
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| |||||||||   || ||||||||||||| |||||| |||||||    
T  40717451 gtggttgggcctaacacaaccccacaaaaccgacttttgaggtgaggattgcccccacttataaa 40717515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000001; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 1800290 - 1800225
Alignment:
Q  8 tgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||||| |||| |||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  1800290 tgtggttgggtcttacacaaccccacaaaaccggtttgtgaggtgaggattgcccccacttataaa 1800225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 1723086 - 1723150
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  1723086 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 1723150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 9273269 - 9273205
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||||| |||||| ||||||||| |||||| |||||||    
T  9273269 gtggttgagcctaacacaaccccacaaaaccagcttgtgaagtgaggattgcccccacttataaa 9273205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 11589859 - 11589795
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  11589859 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 11589795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 20327624 - 20327688
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  20327624 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 20327688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 35038204 - 35038268
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  35038204 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatttcccccacttataaa 35038268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 35038438 - 35038502
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||||| |||| ||||||||||| |||||| |||||||    
T  35038438 gtggttgggcctaacacaaccccacaaaaccagcttgtcaggtgaggattgcccccacttataaa 35038502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 54368590 - 54368526
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| ||||||||||||| || |||||| | |||||||||||||||| |||||| |||||||    
T  54368590 gtggttgggtctaacacaaccccataaaaccggcttgtgaggtgaggattgcccccacttataaa 54368526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 54567966 - 54567902
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  54567966 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatttcccccacttataaa 54567902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 20327860 - 20327923
Alignment:
Q  10 tggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||| | ||||||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  20327860 tggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 20327923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 8019044 - 8018978
Alignment:
Q  7 ttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||| | ||||||||||| ||||||||| | |||||||||||||||| | |||| |||||||    
T  8019044 ttgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcacccacttataaa 8018978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 13574929 - 13574995
Alignment:
Q  7 ttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||| | ||||||||||| ||||||||  | |||||||||||||||| |||||| |||||||    
T  13574929 ttgtggttgggcctaacacaaccccacaaaactggcttgtgaggtgaggatttcccccacttataaa 13574995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 22729176 - 22729118
Alignment:
Q  7 ttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattaccccca 65  Q
    ||||||||| | ||||||||||||||||||||| | |||||| ||||||||| ||||||    
T  22729176 ttgtggttgggcctaacacaacctcacaaaaccggcttgtgaagtgaggattgccccca 22729118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 23691216 - 23691266
Alignment:
Q  23 cacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||||||||||| | |||||||||||||||| |||||| |||||||    
T  23691216 cacaacctcacaaaaccggcttgtgaggtgaggattgcccccacttataaa 23691266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 23708016 - 23708066
Alignment:
Q  23 cacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||||||||||| | |||||||||||||||| |||||| |||||||    
T  23708016 cacaacctcacaaaaccggcttgtgaggtgaggattgcccccacttataaa 23708066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 23708244 - 23708298
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||| ||||||||||| | |||||||||||||||| |||||| |||||||    
T  23708244 ctaacacaatctcacaaaaccggcttgtgaggtgaggattgcccccacttataaa 23708298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 23726472 - 23726522
Alignment:
Q  23 cacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||||||||||| | |||||||||||||||| |||||| |||||||    
T  23726472 cacaacctcacaaaaccggcttgtgaggtgaggattgcccccacttataaa 23726522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 23726700 - 23726754
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||| ||||||||||| | |||||||||||||||| |||||| |||||||    
T  23726700 ctaacacaatctcacaaaaccggcttgtgaggtgaggattgcccccacttataaa 23726754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 23744928 - 23744978
Alignment:
Q  23 cacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||||||||||| | |||||||||||||||| |||||| |||||||    
T  23744928 cacaacctcacaaaaccggcttgtgaggtgaggattgcccccacttataaa 23744978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 23745156 - 23745210
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||| ||||||||||| | |||||||||||||||| |||||| |||||||    
T  23745156 ctaacacaatctcacaaaaccggcttgtgaggtgaggattgcccccacttataaa 23745210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 24063453 - 24063503
Alignment:
Q  23 cacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||||||||||| | |||||||||||||||| |||||| |||||||    
T  24063453 cacaacctcacaaaaccggcttgtgaggtgaggattgcccccacttataaa 24063503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 24063681 - 24063735
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||| ||||||||||| | |||||||||||||||| |||||| |||||||    
T  24063681 ctaacacaatctcacaaaaccggcttgtgaggtgaggattgcccccacttataaa 24063735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 45828083 - 45828029
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||||||||||||||| | |||||||||||||||| |||| | |||||||    
T  45828083 ctaacacaacctcacaaaaccggcttgtgaggtgaggattgccccaacttataaa 45828029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 7697418 - 7697471
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataa 72  Q
    ||||||||||| ||||||||||| ||||||||||| |||| |||||| ||||||    
T  7697418 ctaacacaaccccacaaaaccagcttgtgaggtgatgattgcccccacttataa 7697471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 16926970 - 16927023
Alignment:
Q  20 taacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||||||| ||||||||| | ||||||| ||||||||||||||| |||||||    
T  16926970 taacacaaccccacaaaaccggcttgtgagatgaggattacccccacttataaa 16927023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 34610637 - 34610580
Alignment:
Q  7 ttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattaccccc 64  Q
    ||||||||| ||||||||||||| |||||||||   |||||||||||||||| |||||    
T  34610637 ttgtggttgggtctaacacaaccccacaaaaccgacttgtgaggtgaggattgccccc 34610580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 45138981 - 45139042
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttat 70  Q
    ||||||| |||| |||||||| ||||||||| | |||||||||||||||| |||||| ||||    
T  45138981 gtggttgggtcttacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttat 45139042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 4155398 - 4155334
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | || ||||||||||||| |||||| |||||||    
T  4155398 gtggttgggcctaacacaaccccacaaaaccggcttttgaggtgaggattgcccccacttataaa 4155334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 20303074 - 20303138
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||| | ||||||||| | |||||||||||||||| |||||| |||||||    
T  20303074 gtggttgagcctaacacaatcccacaaaaccggtttgtgaggtgaggattgcccccacttataaa 20303138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 45138812 - 45138876
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| |||| | |||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  45138812 gtggttgggtctcatacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 45138876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 8142430 - 8142481
Alignment:
Q  22 acacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||||||||||||||| | |||||||||||||||| || | |||||||||    
T  8142430 acacaacctcacaaaaccggcttgtgaggtgaggattgcctctatttataaa 8142481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 13741109 - 13741160
Alignment:
Q  7 ttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggatt 58  Q
    ||||||||| ||||||||||||| || |||||| | ||||||||||||||||    
T  13741109 ttgtggttgggtctaacacaaccccaaaaaaccggcttgtgaggtgaggatt 13741160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 26272332 - 26272383
Alignment:
Q  7 ttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggatt 58  Q
    ||||||||| ||||||||||||| ||||||| ||| ||||||||||| ||||    
T  26272332 ttgtggttgggtctaacacaaccccacaaaatcagcttgtgaggtgacgatt 26272383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 472080 - 472134
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||||| ||||||||| | ||||||||| |||||| |||||| |||||||    
T  472080 ctaacacaaccccacaaaaccggcttgtgaggtaaggattgcccccacttataaa 472134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 17638308 - 17638254
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccc 63  Q
    ||||||| | ||||||||||| | ||||||||| |||||||||||||||| ||||    
T  17638308 gtggttgggcctaacacaacccctcaaaaccagcttgtgaggtgaggattgcccc 17638254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 20479084 - 20479018
Alignment:
Q  7 ttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||| | ||| ||| ||||||||||| | | |||||||||||||||| |||||| |||||||    
T  20479084 ttgtggttgggcctatcaccacctcacaaaaacggcttgtgaggtgaggatttcccccacttataaa 20479018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 23610391 - 23610445
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||||| ||||||||| |  |||||| ||||||||||||||| |||||||    
T  23610391 ctaacacaaccccacaaaaccggcctgtgagttgaggattacccccacttataaa 23610445  T

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Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 23691444 - 23691498
Alignment:
Q  19 ctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||| |||||||| || | |||||||||||||||| |||||| |||||||    
T  23691444 ctaacacaatctcacaaatccggcttgtgaggtgaggattgcccccacttataaa 23691498  T

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Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 1681768 - 1681715
Alignment:
Q  20 taacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||||||||||||||||| | ||||| ||||| |||||| |||| |||||||    
T  1681768 taacacaacctcacaaaaccggcttgtggggtgatgattacacccacttataaa 1681715  T

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Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 9273024 - 9272971
Alignment:
Q  20 taacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||||||| ||||||||| | ||||||||||||| || |||||| |||||||    
T  9273024 taacacaaccccacaaaaccggcttgtgaggtgagggttgcccccacttataaa 9272971  T

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Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 24866271 - 24866222
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggatt 58  Q
    ||||||| | ||||||||||| ||||||||| | ||||||||||||||||    
T  24866271 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatt 24866222  T

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Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 6487343 - 6487407
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | |||| |||||| || |||||| | ||||||||||||||||||| ||| |||||||    
T  6487343 gtggttgggcctaaaacaaccccataaaaccggcttgtgaggtgaggattacctccacttataaa 6487407  T

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Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 16239665 - 16239601
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||| | ||||||||| | ||||||||||||| || |||||| |||||||    
T  16239665 gtggttgggcctaacacaatcccacaaaaccggcttgtgaggtgaggtttgcccccacttataaa 16239601  T

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Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 27670402 - 27670466
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| |  | ||||||||||||| |||||| |||||||    
T  27670402 gtggttgggcctaacacaaccccacaaaaccggcctttgaggtgaggattgcccccacttataaa 27670466  T

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Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 45828319 - 45828244
Alignment:
Q  10 tggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaaacacgtgttcagg 86  Q
    |||||| | ||||||||||| ||||||||| | ||||||||||  |||| |||||| |||| |||||| ||||||||    
T  45828319 tggttgggcctaacacaaccccacaaaacctgcttgtgaggtggagattgcccccacttat-aaacacatgttcagg 45828244  T

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Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 49629671 - 49629615
Alignment:
Q  17 gtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||||||| ||||||||| | |||||||||| ||||| || ||| |||||||    
T  49629671 gtctaacacaaccccacaaaaccggtttgtgaggtggggattgccgccacttataaa 49629615  T

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Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 50083091 - 50083155
Alignment:
Q  10 tggttgtgtctaacacaacctc-acaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||| | ||||||||||| | |||||||| | |||||||||||||||| |||||| |||||||    
T  50083091 tggttgggcctaacacaacccccacaaaaccggcttgtgaggtgaggatttcccccacttataaa 50083155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 50930768 - 50930712
Alignment:
Q  17 gtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||| |||||||| |||||||||   |||||||||||||||| |||||| |||||||    
T  50930768 gtcttacacaaccccacaaaaccgttttgtgaggtgaggattgcccccacttataaa 50930712  T

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Target: scaffold0092 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 5729 - 5665
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| ||||||||||||| ||||||||| | |||| || ||||||||||||||| |||||||    
T  5729 gtggttgggtctaacacaaccccacaaaaccggcttgtaagatgaggattacccccacttataaa 5665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 4440 - 4503
Alignment:
Q  10 tggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    |||||| | ||||||||||| ||||||||| | |||||||||||||||| |||||| |||||||    
T  4440 tggttgagcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 4503  T

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Target: scaffold0400 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 3921 - 3864
Alignment:
Q  7 ttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattaccccc 64  Q
    ||||||||||| ||||||||||| ||||||||  | |||||||||||||||| |||||    
T  3921 ttgtggttgtgcctaacacaaccccacaaaactggcttgtgaggtgaggattgccccc 3864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 4565 - 4508
Alignment:
Q  7 ttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattaccccc 64  Q
    ||||||||||| ||||||||||| ||||||||  | |||||||||||||||| |||||    
T  4565 ttgtggttgtgcctaacacaaccccacaaaactggcttgtgaggtgaggattgccccc 4508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0766 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 6348 - 6284
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||| | | |||||||||||||||| |||||| |||||||    
T  6348 gtggttgggcctaacacaaccccacaaaatcggcttgtgaggtgaggattgcccccacttataaa 6284  T

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Target: scaffold0519 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 1990 - 1926
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | |||| ||||||||||| |||||| |||||||    
T  1990 gtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaa 1926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 2225 - 2161
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | |||| ||||||||||| |||||| |||||||    
T  2225 gtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaa 2161  T

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Target: scaffold0181 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 21002 - 20961
Alignment:
Q  20 taacacaacctcacaaaaccagattgtgaggtgaggattacc 61  Q
    |||||||||| ||||||||| | |||||||||||||||||||    
T  21002 taacacaaccccacaaaaccggcttgtgaggtgaggattacc 20961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 5764 - 5828
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| | ||||||| | ||||||| |||||||| |||||| |||||||    
T  5764 gtggttgggcctaacacaaccccgcaaaaccggcttgtgagatgaggattgcccccacttataaa 5828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 3489 - 3545
Alignment:
Q  17 gtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||||||||| ||||||||| | ||||||||||| ||||  ||||| |||||||    
T  3489 gtctaacacaaccccacaaaaccggcttgtgaggtgaagattgtccccacttataaa 3545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 14377 - 14313
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | ||||||||||| ||||  ||||| |||||||    
T  14377 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgatgattgtccccacttataaa 14313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 82152 - 82088
Alignment:
Q  7 ttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttata 71  Q
    ||||||||| | ||||||||||| ||||||||| | |||| |  |||||||| ||||||||||||    
T  82152 ttgtggttgggcctaacacaaccccacaaaaccggtttgtaatttgaggatttcccccatttata 82088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 12729 - 12665
Alignment:
Q  1 taaaatttgtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattaccccca 65  Q
    ||||| ||||||||| | ||||||||||| ||||||| |   |||||||||||||||| ||||||    
T  12729 taaaaattgtggttgggcctaacacaaccacacaaaatcgacttgtgaggtgaggattgccccca 12665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 56533 - 56469
Alignment:
Q  9 gtggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggattacccccatttataaa 73  Q
    ||||||| | ||||||||||| ||||||||| | ||||||||||| |||| ||| || |||||||    
T  56533 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgatgattgcccacagttataaa 56469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 288668 - 288716
Alignment:
Q  10 tggttgtgtctaacacaacctcacaaaaccagattgtgaggtgaggatt 58  Q
    |||||| | ||||||||||  ||||||||||| ||||||||||||||||    
T  288668 tggttgggcctaacacaactccacaaaaccagcttgtgaggtgaggatt 288716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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