View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20783_high_56 (Length: 315)
Name: NF20783_high_56
Description: NF20783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20783_high_56 |
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Alignment Details
Target: chr2 (Bit Score: 292; Significance: 1e-164; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 1 - 304
Target Start/End: Original strand, 14880084 - 14880387
Alignment:
| Q |
1 |
tatgaatattaggtgaaaacagaatggaaaatatgcaatatcatataacctttatattcataaacctccatattcaagtagtattggaatgacatataaa |
100 |
Q |
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| T |
14880084 |
tatgaatattaggtgaaaacagaatggaaaatatgcaatatcatataacctttatattcataaagctccatattcaagtagtattggaatgacatataaa |
14880183 |
T |
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| Q |
101 |
ttgaaatactacaataactaaataaaatcaagaacagaaacattaaacaaaagccagtaaaaatcaatgttatttaaagccactttttcatcaatccaaa |
200 |
Q |
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| T |
14880184 |
ttgaaatactacaataactaaataaaatcaagaacagaaacattaaacaaaagccagtaaaaatcaatgttatttaaagccactttctcatcaatccaaa |
14880283 |
T |
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| Q |
201 |
ggagaaataatttcagttgtacgaatccatcttcatcttgtcaaactccacttttttgttcttggatacatgtagaagaagatcacatacttgccttgat |
300 |
Q |
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| T |
14880284 |
ggagaaataatttcagttgtacgaatccatcttcatcttgtcaaactccacttttttgttctaggatacatgtagaagaagatcacatacttgccttgat |
14880383 |
T |
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| Q |
301 |
gatg |
304 |
Q |
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|||| |
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| T |
14880384 |
gatg |
14880387 |
T |
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