View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20783_high_89 (Length: 254)
Name: NF20783_high_89
Description: NF20783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20783_high_89 |
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Alignment Details
Target: chr3 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 13 - 237
Target Start/End: Original strand, 360388 - 360612
Alignment:
| Q |
13 |
aaaatacgataaggaaatgttggaatcacctgatagcttccaataacatgaaagaaaaccatcaagttagcaatagcgataacccatggaggacgttcga |
112 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
360388 |
aaaatacgataaggaaatgttagaatcacctgatagcttccaataacatgaaagaaaaccatcaagttagcaatagcgataacccatggaggacgttcga |
360487 |
T |
|
| Q |
113 |
gtgagacgagtacatcatcttctaccaaatctccaaatgcccaaaaaccggatacagcaacggtgagatagcaaagaataacaatggtgtatgcaacaac |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
360488 |
gtgagacgagtacatcatcttctaccaaatctccaaatgcccaaaaaccggatacagcaacggtgagatagcaaagaataacaatggtgtatgcaacaac |
360587 |
T |
|
| Q |
213 |
aacacctctccacattggtactttg |
237 |
Q |
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||||||||||||||||||||||||| |
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| T |
360588 |
aacacctctccacattggtactttg |
360612 |
T |
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