View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20783_high_90 (Length: 253)
Name: NF20783_high_90
Description: NF20783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20783_high_90 |
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Alignment Details
Target: chr2 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 14878527 - 14878295
Alignment:
| Q |
1 |
aattttgtgcacgacacacaatacttgaatgataaacgtccaatgaatctaatctatattcaatgcagtggattttcttctgatccattccaaatttcac |
100 |
Q |
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| T |
14878527 |
aattttgtgtacgacacacaatacttgaatgataaacgtccaatgaatctaatctatattcaatgcactggattttcttctgatccattccaaatttcac |
14878428 |
T |
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| Q |
101 |
atattttcctgactcattgatatacgatcaccgctcccaaaacatgtctgctttataacttttttggcagtgttatcgacatgattttatcagttttcat |
200 |
Q |
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|||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
14878427 |
atattttcgtgactctttgatatacgatcaccgctcccaaaacatgtcttctttataacttttttggcagtgttatcgacattattttatcagttttcat |
14878328 |
T |
|
| Q |
201 |
ctcttggttggagcacaatgaggtgttgttctt |
233 |
Q |
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|||||| |||||||||||||||||||||||||| |
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| T |
14878327 |
ctcttgtttggagcacaatgaggtgttgttctt |
14878295 |
T |
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