View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20783_low_113 (Length: 237)

Name: NF20783_low_113
Description: NF20783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20783_low_113
NF20783_low_113
[»] chr8 (3 HSPs)
chr8 (16-203)||(35294176-35294363)
chr8 (21-223)||(26348659-26348861)
chr8 (22-190)||(44201982-44202150)
[»] chr7 (7 HSPs)
chr7 (30-217)||(17994284-17994471)
chr7 (30-217)||(34525719-34525906)
chr7 (30-217)||(45570793-45570980)
chr7 (22-192)||(25227860-25228030)
chr7 (22-192)||(25237692-25237862)
chr7 (33-188)||(48430621-48430776)
chr7 (22-190)||(48509466-48509634)
[»] chr3 (2 HSPs)
chr3 (30-217)||(35024925-35025112)
chr3 (22-190)||(38323725-38323893)
[»] scaffold0044 (1 HSPs)
scaffold0044 (20-188)||(79372-79540)
[»] chr5 (4 HSPs)
chr5 (21-227)||(24530272-24530478)
chr5 (22-190)||(36666610-36666778)
chr5 (22-190)||(36674997-36675165)
chr5 (33-122)||(36396054-36396143)
[»] scaffold0057 (1 HSPs)
scaffold0057 (33-178)||(53831-53976)
[»] chr1 (3 HSPs)
chr1 (22-192)||(29890925-29891095)
chr1 (33-122)||(52662460-52662549)
chr1 (22-190)||(52605077-52605245)
[»] scaffold0014 (2 HSPs)
scaffold0014 (22-190)||(163454-163622)
scaffold0014 (22-190)||(172756-172924)
[»] chr6 (1 HSPs)
chr6 (22-190)||(29655862-29656030)
[»] chr2 (3 HSPs)
chr2 (22-190)||(12508807-12508975)
chr2 (22-190)||(14676951-14677119)
chr2 (22-190)||(39591247-39591415)
[»] chr4 (1 HSPs)
chr4 (33-122)||(20030595-20030684)


Alignment Details
Target: chr8 (Bit Score: 172; Significance: 1e-92; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 16 - 203
Target Start/End: Original strand, 35294176 - 35294363
Alignment:
Q  16 tgcaactcacaggattctgtgatgctgactgggcatctgatccagatgatagaagaagcacttctggtgcctgtattttcttaggtcccaacctcatctc 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  35294176 tgcaactcacaggattctgtgatgctgactgggcatctgatccagatgatagaagaagcacttcaggtgcctgtattttcttaggtcccaacctcatctc 35294275  T
Q  116 ttggtgggctaagaaacaaactcttgctgctaggtcaagtgcagaggctgagtacagaagtctagctcaagcttctgttgaaatctta 203  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  35294276 ttggtgggctaagaaacaaactcttgttgctaggtcaagtgcagaggctgagtacagaagtctagcttaagcttctgctgaaatctta 35294363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 21 - 223
Target Start/End: Complemental strand, 26348861 - 26348659
Alignment:
Q  21 ctcacaggattctgtgatgctgactgggcatctgatccagatgatagaagaagcacttctggtgcctgtattttcttaggtcccaacctcatctcttggt 120  Q
    |||||||| || ||||||||||| ||||| ||||| |||||||| ||||||||||| || ||||| ||||||||||| || || || ||||| || ||||    
T  26348861 ctcacaggtttttgtgatgctgattgggcctctgacccagatgacagaagaagcacctcaggtgcttgtattttcttgggccctaatctcatttcctggt 26348762  T
Q  121 gggctaagaaacaaactcttgctgctaggtcaagtgcagaggctgagtacagaagtctagctcaagcttctgttgaaatcttatggccacaatctctcct 220  Q
    |||||||||||||  |||||| |||||| || |||||||| || || ||||| ||||| || ||||| |||| ||||||  | |||| |||||| |||||    
T  26348761 gggctaagaaacagcctcttgttgctagatccagtgcagaagcagaatacaggagtcttgcacaagcctctgctgaaattctgtggctacaatcgctcct 26348662  T
Q  221 aca 223  Q
    |||    
T  26348661 aca 26348659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 190
Target Start/End: Original strand, 44201982 - 44202150
Alignment:
Q  22 tcacaggattctgtgatgctgactgggcatctgatccagatgatagaagaagcacttctggtgcctgtattttcttaggtcccaacctcatctcttggtg 121  Q
    |||| ||||| ||||||||||||||||| || ||||| ||||| ||||||||||| || || ||||| || ||  | || ||||| ||  | || |||||    
T  44201982 tcaccggattttgtgatgctgactgggcttcagatcctgatgacagaagaagcacatcaggagcctgcatatttctgggccccaatctagtttcctggtg 44202081  T
Q  122 ggctaagaaacaaactcttgctgctaggtcaagtgcagaggctgagtacagaagtctagctcaagcttc 190  Q
    ||| | |||||| || ||||  ||||| || |||||||||||||| || ||||| || || ||||||||    
T  44202082 ggcaaggaaacagacccttgtagctagatctagtgcagaggctgaatatagaagccttgcacaagcttc 44202150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 3e-35; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 30 - 217
Target Start/End: Original strand, 17994284 - 17994471
Alignment:
Q  30 ttctgtgatgctgactgggcatctgatccagatgatagaagaagcacttctggtgcctgtattttcttaggtcccaacctcatctcttggtgggctaaga 129  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||| || |||||||||||  | || || || || ||||| ||||||||||| ||||    
T  17994284 ttctgtgatgctgactgggcttctgacccagatgatagaagaagcacctcaggtgcctgtatacttttggggccaaatctcatatcttggtgggcaaaga 17994383  T
Q  130 aacaaactcttgctgctaggtcaagtgcagaggctgagtacagaagtctagctcaagcttctgttgaaatcttatggccacaatctct 217  Q
    ||||||| || | ||| ||||| ||||| || ||||| ||||||||||| ||||||||||||| | || | ||||||  |||||||||    
T  17994384 aacaaacactggttgcaaggtccagtgctgaagctgaatacagaagtctggctcaagcttctgcttaagttttatggatacaatctct 17994471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 30 - 217
Target Start/End: Complemental strand, 34525906 - 34525719
Alignment:
Q  30 ttctgtgatgctgactgggcatctgatccagatgatagaagaagcacttctggtgcctgtattttcttaggtcccaacctcatctcttggtgggctaaga 129  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||| || |||||||||||  |  | || || || ||||| ||||||||||| ||||    
T  34525906 ttctgtgatgctgactgggcttctgacccagatgatagaagaagcacctcaggtgcctgtatacttctggggccaaatctcatatcttggtgggcaaaga 34525807  T
Q  130 aacaaactcttgctgctaggtcaagtgcagaggctgagtacagaagtctagctcaagcttctgttgaaatcttatggccacaatctct 217  Q
    ||||||| || | ||| ||||| ||||| || ||||| ||||||||||| ||||||||||||| |||| | ||||||  |||||||||    
T  34525806 aacaaacactggttgcaaggtccagtgctgaagctgaatacagaagtctggctcaagcttctgctgaagttttatggatacaatctct 34525719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 30 - 217
Target Start/End: Complemental strand, 45570980 - 45570793
Alignment:
Q  30 ttctgtgatgctgactgggcatctgatccagatgatagaagaagcacttctggtgcctgtattttcttaggtcccaacctcatctcttggtgggctaaga 129  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||| || |||||||||||  |  | || || || ||||| ||||||||||| ||||    
T  45570980 ttctgtgatgctgactgggcttctgacccagatgatagaagaagcacctcaggtgcctgtatacttctggggccaaatctcatatcttggtgggcaaaga 45570881  T
Q  130 aacaaactcttgctgctaggtcaagtgcagaggctgagtacagaagtctagctcaagcttctgttgaaatcttatggccacaatctct 217  Q
    ||||||| || | ||| ||||| ||||| || ||||| ||||||||||| ||||||||||||| |||| | ||||||  |||||||||    
T  45570880 aacaaacactggttgcaaggtccagtgctgaagctgaatacagaagtctggctcaagcttctgctgaagttttatggatacaatctct 45570793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 22 - 192
Target Start/End: Complemental strand, 25228030 - 25227860
Alignment:
Q  22 tcacaggattctgtgatgctgactgggcatctgatccagatgatagaagaagcacttctggtgcctgtattttcttaggtcccaacctcatctcttggtg 121  Q
    |||| ||||| |||||||| || ||||||||||||||||||||||||||||||||||| ||||| || |||| ||| || || || ||  | || |||||    
T  25228030 tcactggattttgtgatgcagattgggcatctgatccagatgatagaagaagcacttcaggtgcttgcatttacttgggacctaatcttgtttcatggtg 25227931  T
Q  122 ggctaagaaacaaactcttgctgctaggtcaagtgcagaggctgagtacagaagtctagctcaagcttctg 192  Q
    ||| ||||| |||||||||| ||| || |||||||| ||||| ||||| |||||| |||||||||| ||||    
T  25227930 ggcaaagaagcaaactcttgttgccagatcaagtgctgaggcagagtatagaagtttagctcaagcatctg 25227860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 22 - 192
Target Start/End: Complemental strand, 25237862 - 25237692
Alignment:
Q  22 tcacaggattctgtgatgctgactgggcatctgatccagatgatagaagaagcacttctggtgcctgtattttcttaggtcccaacctcatctcttggtg 121  Q
    |||| ||||| |||||||| || ||||||||||||||||||||||||||||||||||| ||||| || |||| ||| || || || ||  | || |||||    
T  25237862 tcactggattttgtgatgcagattgggcatctgatccagatgatagaagaagcacttcaggtgcttgcatttacttgggacctaatcttgtttcatggtg 25237763  T
Q  122 ggctaagaaacaaactcttgctgctaggtcaagtgcagaggctgagtacagaagtctagctcaagcttctg 192  Q
    ||| ||||| |||||||||| ||| || |||||||| ||||| ||||| |||||| |||||||||| ||||    
T  25237762 ggcaaagaagcaaactcttgttgccagatcaagtgctgaggcagagtatagaagtttagctcaagcatctg 25237692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 33 - 188
Target Start/End: Original strand, 48430621 - 48430776
Alignment:
Q  33 tgtgatgctgactgggcatctgatccagatgatagaagaagcacttctggtgcctgtattttcttaggtcccaacctcatctcttggtgggctaagaaac 132  Q
    |||||||| || ||||| |||||||||||||||||||||||||||| |||||| ||||| |  || || |||||||| || ||||||||||||||||| |    
T  48430621 tgtgatgcagattgggcttctgatccagatgatagaagaagcacttatggtgcttgtatatatttgggacccaaccttatttcttggtgggctaagaagc 48430720  T
Q  133 aaactcttgctgctaggtcaagtgcagaggctgagtacagaagtctagctcaagct 188  Q
    | || |||| ||| || |||||||| |||||||| ||||||||  | |||||||||    
T  48430721 agacacttgttgccagatcaagtgctgaggctgaatacagaagcttggctcaagct 48430776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 190
Target Start/End: Complemental strand, 48509634 - 48509466
Alignment:
Q  22 tcacaggattctgtgatgctgactgggcatctgatccagatgatagaagaagcacttctggtgcctgtattttcttaggtcccaacctcatctcttggtg 121  Q
    |||| ||||| ||||||||||||||||| || ||||| ||||| ||||||||||| || || ||||| || ||  | || ||||| ||  | || |||||    
T  48509634 tcaccggattttgtgatgctgactgggcttcagatcctgatgacagaagaagcacatcaggagcctgcatatttctgggccccaatctagtttcctggtg 48509535  T
Q  122 ggctaagaaacaaactcttgctgctaggtcaagtgcagaggctgagtacagaagtctagctcaagcttc 190  Q
    ||| | |||||| || ||||  ||||| || |||||||||||||| || ||||| || || ||||||||    
T  48509534 ggcaaggaaacagacccttgtagctagatctagtgcagaggctgaatatagaagccttgcacaagcttc 48509466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 30 - 217
Target Start/End: Complemental strand, 35025112 - 35024925
Alignment:
Q  30 ttctgtgatgctgactgggcatctgatccagatgatagaagaagcacttctggtgcctgtattttcttaggtcccaacctcatctcttggtgggctaaga 129  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||| || |||||||||||  |  | || || || ||||| ||||||||||| ||||    
T  35025112 ttctgtgatgctgactgggcttctgacccagatgatagaagaagcacctcaggtgcctgtatacttctggggccaaatctcatatcttggtgggcaaaga 35025013  T
Q  130 aacaaactcttgctgctaggtcaagtgcagaggctgagtacagaagtctagctcaagcttctgttgaaatcttatggccacaatctct 217  Q
    ||||||| || | ||| ||||| ||||| || ||||| ||||||||||| ||||||||||||| |||| | ||||||  |||||||||    
T  35025012 aacaaacactggttgcaaggtccagtgctgaagctgaatacagaagtctggctcaagcttctgctgaagttttatggatacaatctct 35024925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 190
Target Start/End: Complemental strand, 38323893 - 38323725
Alignment:
Q  22 tcacaggattctgtgatgctgactgggcatctgatccagatgatagaagaagcacttctggtgcctgtattttcttaggtcccaacctcatctcttggtg 121  Q
    |||| ||||| ||||||||||||||||| || ||||| ||||| ||||||||||| || || ||||| || ||  | || ||||| ||  | || |||||    
T  38323893 tcaccggattttgtgatgctgactgggcttcagatcctgatgacagaagaagcacatcaggagcctgcatatttctgggccccaatctagtttcctggtg 38323794  T
Q  122 ggctaagaaacaaactcttgctgctaggtcaagtgcagaggctgagtacagaagtctagctcaagcttc 190  Q
    ||| | |||||| || ||||  ||||| || |||||||||||||| || ||||| || || ||||||||    
T  38323793 ggcaaggaaacagacccttgtagctagatctagtgcagaggctgaatatagaagccttgcacaagcttc 38323725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 79372 - 79540
Alignment:
Q  20 actcacaggattctgtgatgctgactgggcatctgatccagatgatagaagaagcacttctggtgcctgtattttcttaggtcccaacctcatctcttgg 119  Q
    |||||| || || ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||| |  || || |||||||| || ||||||    
T  79372 actcactggtttttgtgatgctgattgggcttctgatccagatgatagaagaagcacttctggtgcttgtatatatttgggacccaaccttatttcttgg 79471  T
Q  120 tgggctaagaaacaaactcttgctgctaggtcaagtgcagaggctgagtacagaagtctagctcaagct 188  Q
    ||||||||||| |  || |||| ||| || || ||||| |||||||| ||||||||  | |||||||||    
T  79472 tgggctaagaagccgacacttgttgccagatccagtgctgaggctgaatacagaagcttggctcaagct 79540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 2e-27; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 227
Target Start/End: Original strand, 24530272 - 24530478
Alignment:
Q  21 ctcacaggattctgtgatgctgactgggcatctgatccagatgatagaagaagcacttctggtgcctgtattttcttaggtcccaacctcatctcttggt 120  Q
    |||||||| || ||||||||||| ||||| ||||| | |||||| ||||||| ||| || ||||| |||||||||||||| || || ||||| || ||||    
T  24530272 ctcacaggtttttgtgatgctgattgggcttctgacctagatgacagaagaaacacctcaggtgcttgtattttcttaggccctaatctcatttcctggt 24530371  T
Q  121 gggctaagaaacaaactcttgctgctaggtcaagtgcagaggctgagtacagaagtctagctcaagcttctgttgaaatcttatggccacaatctctcct 220  Q
    |||||||||||||  |||||| |||||| || |||||||| |  || ||||  ||||| || ||||| |||| |||||| || |||| ||| | ||||||    
T  24530372 gggctaagaaacagcctcttgttgctagatccagtgcagaagtagaatacatgagtcttgcacaagcctctgctgaaattttgtggctacagtttctcct 24530471  T
Q  221 acaggaa 227  Q
    |||||||    
T  24530472 acaggaa 24530478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 190
Target Start/End: Original strand, 36666610 - 36666778
Alignment:
Q  22 tcacaggattctgtgatgctgactgggcatctgatccagatgatagaagaagcacttctggtgcctgtattttcttaggtcccaacctcatctcttggtg 121  Q
    |||| ||||| ||||||||||||||||| || ||||| ||||| ||||||||||| || || ||||| || ||  | || ||||| ||  | || |||||    
T  36666610 tcaccggattttgtgatgctgactgggcttcagatcctgatgacagaagaagcacatcaggagcctgcatatttctgggccccaatctagtttcctggtg 36666709  T
Q  122 ggctaagaaacaaactcttgctgctaggtcaagtgcagaggctgagtacagaagtctagctcaagcttc 190  Q
    ||| | |||||| || ||||  ||||| || |||||||||||||| || ||||| || || ||||||||    
T  36666710 ggcaaggaaacagacccttgtagctagatctagtgcagaggctgaatatagaagccttgcacaagcttc 36666778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 190
Target Start/End: Complemental strand, 36675165 - 36674997
Alignment:
Q  22 tcacaggattctgtgatgctgactgggcatctgatccagatgatagaagaagcacttctggtgcctgtattttcttaggtcccaacctcatctcttggtg 121  Q
    |||| ||||| ||||||||||||||||| || ||||| ||||| ||||||||||| || || ||||| || ||  | || ||||| ||  | || |||||    
T  36675165 tcaccggattttgtgatgctgactgggcttcagatcctgatgacagaagaagcacatcaggagcctgcatatttctgggccccaatctagtttcctggtg 36675066  T
Q  122 ggctaagaaacaaactcttgctgctaggtcaagtgcagaggctgagtacagaagtctagctcaagcttc 190  Q
    ||| | |||||| || ||||  ||||| || |||||||||||||| || ||||| || || ||||||||    
T  36675065 ggcaaggaaacagacccttgtagctagatctagtgcagaggctgaatatagaagccttgcacaagcttc 36674997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 122
Target Start/End: Complemental strand, 36396143 - 36396054
Alignment:
Q  33 tgtgatgctgactgggcatctgatccagatgatagaagaagcacttctggtgcctgtattttcttaggtcccaacctcatctcttggtgg 122  Q
    ||||||||||||| |||  ||||||||||||| ||||||  ||||| ||||||    |||||||| |||||||| ||||| || ||||||    
T  36396143 tgtgatgctgactaggctgctgatccagatgacagaagatccacttttggtgctgcaattttctttggtcccaatctcatttcatggtgg 36396054  T

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Target: scaffold0057 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 178
Target Start/End: Complemental strand, 53976 - 53831
Alignment:
Q  33 tgtgatgctgactgggcatctgatccagatgatagaagaagcacttctggtgcctgtattttcttaggtcccaacctcatctcttggtgggctaagaaac 132  Q
    |||||||| || ||||| ||||||||||||||||||||||||||||| ||||| ||||| |   | || || || ||  | || ||||||||||||||||    
T  53976 tgtgatgcagattgggcctctgatccagatgatagaagaagcacttcaggtgcttgtatatatctgggacctaatcttgtttcatggtgggctaagaaac 53877  T
Q  133 aaactcttgctgctaggtcaagtgcagaggctgagtacagaagtct 178  Q
    |||  |||| ||  ||||||||||  ||||| || |||||||||||    
T  53876 aaatccttgttgtcaggtcaagtgttgaggcagaatacagaagtct 53831  T

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Target: chr1 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 192
Target Start/End: Original strand, 29890925 - 29891095
Alignment:
Q  22 tcacaggattctgtgatgctgactgggcatctgatccagatgatagaagaagcacttctggtgcctgtattttcttaggtcccaacctcatctcttggtg 121  Q
    |||| ||||| ||||||||||||||||| || ||||| ||||| ||||||||||| || || ||||| || ||  | || ||||| ||  | || |||||    
T  29890925 tcaccggattttgtgatgctgactgggcttcagatcctgatgacagaagaagcacatcaggagcctgcatatttctgggccccaatctagtttcctggtg 29891024  T
Q  122 ggctaagaaacaaactcttgctgctaggtcaagtgcagaggctgagtacagaagtctagctcaagcttctg 192  Q
    ||| | |||||| || ||||  ||||| || |||||||||||||| || ||||| || || ||||||||||    
T  29891025 ggcaaggaaacagacccttgtagctagatctagtgcagaggctgaatatagaagccttgcacaagcttctg 29891095  T

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Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 122
Target Start/End: Complemental strand, 52662549 - 52662460
Alignment:
Q  33 tgtgatgctgactgggcatctgatccagatgatagaagaagcacttctggtgcctgtattttcttaggtcccaacctcatctcttggtgg 122  Q
    |||||||||||||||||  ||||||||||||| ||||||  ||||||||||||    |||||||| |||||||| ||||| || ||||||    
T  52662549 tgtgatgctgactgggctgctgatccagatgacagaagatccacttctggtgctgccattttctttggtcccaatctcatttcatggtgg 52662460  T

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Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 190
Target Start/End: Complemental strand, 52605245 - 52605077
Alignment:
Q  22 tcacaggattctgtgatgctgactgggcatctgatccagatgatagaagaagcacttctggtgcctgtattttcttaggtcccaacctcatctcttggtg 121  Q
    |||| ||||| ||||||||||||||||| || ||||| ||||| ||||||||||| || || ||||| || ||  | || ||||| ||  | || |||||    
T  52605245 tcaccggattttgtgatgctgactgggcttcagatcctgatgacagaagaagcacatcaggagcctgcatatttctgggccccaatctagtttcctggtg 52605146  T
Q  122 ggctaagaaacaaactcttgctgctaggtcaagtgcagaggctgagtacagaagtctagctcaagcttc 190  Q
    ||| | |||||| || ||||  ||||| || |||||||||||||| || ||||| || || ||||||||    
T  52605145 ggcaaggaaacagacccttgtagctagatctagtgcagaggctgaatatagaagccttgcacaagcttc 52605077  T

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Target: scaffold0014 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 190
Target Start/End: Original strand, 163454 - 163622
Alignment:
Q  22 tcacaggattctgtgatgctgactgggcatctgatccagatgatagaagaagcacttctggtgcctgtattttcttaggtcccaacctcatctcttggtg 121  Q
    |||| ||||| ||||||||||||||||| || ||||| ||||| ||||||||||| || || ||||| || ||  | || ||||| ||  | || |||||    
T  163454 tcaccggattttgtgatgctgactgggcttcagatcctgatgacagaagaagcacatcaggagcctgcatatttctgggccccaatctagtttcctggtg 163553  T
Q  122 ggctaagaaacaaactcttgctgctaggtcaagtgcagaggctgagtacagaagtctagctcaagcttc 190  Q
    ||| | |||||| || ||||  ||||| || |||||||||||||| || ||||| || || ||||||||    
T  163554 ggcaaggaaacagacccttgtagctagatctagtgcagaggctgaatatagaagccttgcacaagcttc 163622  T

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Target: scaffold0014; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 190
Target Start/End: Original strand, 172756 - 172924
Alignment:
Q  22 tcacaggattctgtgatgctgactgggcatctgatccagatgatagaagaagcacttctggtgcctgtattttcttaggtcccaacctcatctcttggtg 121  Q
    |||| ||||| ||||||||||||||||| || ||||| ||||| ||||||||||| || || ||||| || ||  | || ||||| ||  | || |||||    
T  172756 tcaccggattttgtgatgctgactgggcttcagatcctgatgacagaagaagcacatcaggagcctgcatatttctgggccccaatctagtttcctggtg 172855  T
Q  122 ggctaagaaacaaactcttgctgctaggtcaagtgcagaggctgagtacagaagtctagctcaagcttc 190  Q
    ||| | |||||| || ||||  ||||| || |||||||||||||| || ||||| || || ||||||||    
T  172856 ggcaaggaaacagacccttgtagctagatctagtgcagaggctgaatatagaagccttgcacaagcttc 172924  T

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Target: chr6 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 190
Target Start/End: Original strand, 29655862 - 29656030
Alignment:
Q  22 tcacaggattctgtgatgctgactgggcatctgatccagatgatagaagaagcacttctggtgcctgtattttcttaggtcccaacctcatctcttggtg 121  Q
    |||| ||||| ||||||||||||||||| || ||||| ||||| ||||||||||| || || ||||| || ||  | || ||||| ||  | || |||||    
T  29655862 tcaccggattttgtgatgctgactgggcttcagatcctgatgacagaagaagcacatcaggagcctgcatatttctgggccccaatctagtttcctggtg 29655961  T
Q  122 ggctaagaaacaaactcttgctgctaggtcaagtgcagaggctgagtacagaagtctagctcaagcttc 190  Q
    ||| | |||||| || ||||  ||||| || |||||||||||||| || ||||| || || ||||||||    
T  29655962 ggcaaggaaacagacccttgtagctagatctagtgcagaggctgaatatagaagccttgcacaagcttc 29656030  T

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Target: chr2 (Bit Score: 37; Significance: 0.000000000005; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 190
Target Start/End: Original strand, 12508807 - 12508975
Alignment:
Q  22 tcacaggattctgtgatgctgactgggcatctgatccagatgatagaagaagcacttctggtgcctgtattttcttaggtcccaacctcatctcttggtg 121  Q
    |||| ||||| ||||||||||||||||| || ||||| ||||| ||||||||||| || || ||||| || ||  | || ||||| ||  | || |||||    
T  12508807 tcaccggattttgtgatgctgactgggcttcagatcctgatgacagaagaagcacatcaggagcctgcatatttctgggccccaatctagtttcctggtg 12508906  T
Q  122 ggctaagaaacaaactcttgctgctaggtcaagtgcagaggctgagtacagaagtctagctcaagcttc 190  Q
    ||| | |||||| || ||||  ||||| || |||||||||||||| || ||||| || || ||||||||    
T  12508907 ggcaaggaaacagacccttgtagctagatctagtgcagaggctgaatatagaagccttgcacaagcttc 12508975  T

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Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 190
Target Start/End: Complemental strand, 14677119 - 14676951
Alignment:
Q  22 tcacaggattctgtgatgctgactgggcatctgatccagatgatagaagaagcacttctggtgcctgtattttcttaggtcccaacctcatctcttggtg 121  Q
    |||| ||||| ||||||||||||||||| || ||||| ||||| ||||||||||| || || ||||| || ||  | || ||||| ||  | || |||||    
T  14677119 tcaccggattttgtgatgctgactgggcttcagatcctgatgacagaagaagcacatcaggagcctgcatatttctgggccccaatctagtttcctggtg 14677020  T
Q  122 ggctaagaaacaaactcttgctgctaggtcaagtgcagaggctgagtacagaagtctagctcaagcttc 190  Q
    ||| | |||||| || ||||  ||||| || |||||||||||||| || ||||| || || ||||||||    
T  14677019 ggcaaggaaacagacccttgtagctagatctagtgcagaggctgaatatagaagccttgcacaagcttc 14676951  T

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Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 190
Target Start/End: Original strand, 39591247 - 39591415
Alignment:
Q  22 tcacaggattctgtgatgctgactgggcatctgatccagatgatagaagaagcacttctggtgcctgtattttcttaggtcccaacctcatctcttggtg 121  Q
    |||| ||||| ||||||||||||||||| || ||||| ||||| ||||||||||| || || ||||| || ||  | || ||||| ||  | || |||||    
T  39591247 tcaccggattttgtgatgctgactgggcttcagatcctgatgacagaagaagcacatcaggagcctgcatatttctgggccccaatctagtttcctggtg 39591346  T
Q  122 ggctaagaaacaaactcttgctgctaggtcaagtgcagaggctgagtacagaagtctagctcaagcttc 190  Q
    ||| | |||||| || ||||  ||||| || |||||||||||||| || ||||| || || ||||||||    
T  39591347 ggcaaggaaacagacccttgtagctagatctagtgcagaggctgaatatagaagccttgcacaagcttc 39591415  T

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Target: chr4 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 122
Target Start/End: Original strand, 20030595 - 20030684
Alignment:
Q  33 tgtgatgctgactgggcatctgatccagatgatagaagaagcacttctggtgcctgtattttcttaggtcccaacctcatctcttggtgg 122  Q
    |||||||||||||||||| | |||||  |||||||||||  |||||||||| |   ||||||||| ||||| ||  | ||||||||||||    
T  20030595 tgtgatgctgactgggcagcagatcctaatgatagaagatccacttctggttctgctattttctttggtcctaatgttatctcttggtgg 20030684  T

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