View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20783_low_122 (Length: 226)
Name: NF20783_low_122
Description: NF20783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20783_low_122 |
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Alignment Details
Target: chr1 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 22091363 - 22091567
Alignment:
| Q |
1 |
caggatcagctaaacttcgatgaagtggcagcgcctcaacctataagaaggctaa-ccccatctgatacctaacctaagatcattgacta-atgcatatt |
98 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||| ||||||||| |
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| T |
22091363 |
caggatcagctaaacttcgatgaagtggcagcgcctcaacctataagagggctaaaccccatctgatatctaacctaagatcattgactacatgcatatt |
22091462 |
T |
|
| Q |
99 |
aatgtctctggtggattttgaagttcaaattatacaagccacaccaggagtagcaatgtaatgttcctatcgaacaacaatgtagccgatagcaactaat |
198 |
Q |
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|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
22091463 |
aatgtctctggtggatttcgaagttcaaattatacaagccacaccaggagtagcaatgtaatgttcctatcgaacaacaatgtagccgatagcaagtaat |
22091562 |
T |
|
| Q |
199 |
tcagc |
203 |
Q |
| |
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||||| |
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| T |
22091563 |
tcagc |
22091567 |
T |
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