View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20783_low_131 (Length: 211)
Name: NF20783_low_131
Description: NF20783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20783_low_131 |
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Alignment Details
Target: chr3 (Bit Score: 139; Significance: 6e-73; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 29 - 194
Target Start/End: Original strand, 41580339 - 41580505
Alignment:
| Q |
29 |
cgttttgttctcacattttcaccattaatggtgaatattttatttagaactttaatgcaattcaagtccaactctaaaatttacaaac-aaaaataataa |
127 |
Q |
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| T |
41580339 |
cgttttgttctcacatttccaccattaatggtgaatattttatttaaaacttttatgcaattcaagtccaagtctaaaatttacaaacaaaaaataataa |
41580438 |
T |
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| Q |
128 |
ttaaattcctcttgttccattctttccaaatcattcaccgaacttcaacatattaacacagaaaaac |
194 |
Q |
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| T |
41580439 |
ttaaattcctcttgttccattctttccaaatcattcactgaacttcaacatattaacacagaaaaac |
41580505 |
T |
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