View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20783_low_132 (Length: 209)
Name: NF20783_low_132
Description: NF20783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20783_low_132 |
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Alignment Details
Target: chr3 (Bit Score: 173; Significance: 3e-93; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 15 - 191
Target Start/End: Original strand, 48332537 - 48332713
Alignment:
| Q |
15 |
aagaagcaggggagttgaactcacgtatgaatgcgaataagatttagaggtatcaatatgatttcatcacttaccactattatacacatacagatggagt |
114 |
Q |
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| T |
48332537 |
aagaagcaggggagttgaactcacgtatgaatgcgaataagatttagaggtatcaatatgatttcatcacttaccactattatacacatacagatggagt |
48332636 |
T |
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| Q |
115 |
agactcttatgagttatcaatataaggaatcatgcaagtatcagccagggaaacttggcaaggcagtcgataatata |
191 |
Q |
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| T |
48332637 |
ggactcttatgagttatcaatataaggaatcatgcaagtatcagccagggaaacttggcaaggcagtcgataatata |
48332713 |
T |
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