View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20783_low_20 (Length: 441)
Name: NF20783_low_20
Description: NF20783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20783_low_20 |
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Alignment Details
Target: chr8 (Bit Score: 399; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 399; E-Value: 0
Query Start/End: Original strand, 17 - 427
Target Start/End: Original strand, 7195918 - 7196328
Alignment:
| Q |
17 |
agtgagtatgatcaaggaagtgatgaaacttctattgctgattttttcattgactttgatcatcaagatcaattgatggttggtgatgatgagtctaatt |
116 |
Q |
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| T |
7195918 |
agtgagtatgatcaaggaagtgatgaaacttctattgctgattttttcattgactttgatcatcaagatcaattgatggttggtgatgatgagtctaatt |
7196017 |
T |
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| Q |
117 |
caaagattccacaaatggaagatcacaaggtgagttcaacaaatagtactcatagttcatcaccaccttctgatcattgtcatcttttagcagagaaatt |
216 |
Q |
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| T |
7196018 |
caaagattccacaaatggaagatcacaaggtgagttcaacaaatagtactcatagttcatcatcaccttctgatcattgtcatcttttagcagagaaatt |
7196117 |
T |
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| Q |
217 |
tgatcctcaagagatccttttggatgtggagcttaagaagatggcttcctttcttggacttgaaaatgattgaagtgatttattccaatgatgggaccaa |
316 |
Q |
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| T |
7196118 |
tgaccctcaagagatccttttggatgtggagcttaagaagatggcttcctttcttggacttgaaaatgattgaagtgatttattccaatgaggggaccaa |
7196217 |
T |
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| Q |
317 |
gagaaaaaggtcaagtgaattgggaatcatatagcctttgctatatgccatttttatatgtatttcctaactaaacatgtaactagatgaacaagttctt |
416 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7196218 |
gagaaaaaggtcaagtgaattgggaatcatatagcctttgctatatgccatttttatatgtatttcctaactaaacatgtaactagatgaacaagttctt |
7196317 |
T |
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| Q |
417 |
ggcttcttctt |
427 |
Q |
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| T |
7196318 |
ggcttcttctt |
7196328 |
T |
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