View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20783_low_53 (Length: 319)
Name: NF20783_low_53
Description: NF20783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20783_low_53 |
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Alignment Details
Target: chr7 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 35857192 - 35857493
Alignment:
| Q |
1 |
agcagcaaatcagtaatgatttattttttcgtgtgctaattacggcaatgattgaagaacgttcaagacaatgtttttatataccagacaaatggaaagc |
100 |
Q |
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| T |
35857192 |
agcagcaaatcagtaatgatttattttttcgtgtgctaattacggcaatgattgaagaacgttcaagataatgtttttatatacctaacaaatggaaagc |
35857291 |
T |
|
| Q |
101 |
tctgtttgaaattaacattgcgtttaattttgttggcgaaatgctccacagacaacgtgtcccataacaattcttttactgtaataaggtcagtaatatc |
200 |
Q |
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|| ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35857292 |
tcagtttgaaattaacattgcgtttaattttgttggcgaaatgctccacacacaaggtgtcccataacaattcttttactgtaataaggtcagtaatatc |
35857391 |
T |
|
| Q |
201 |
ataggatgctattaagtcatgaagatattgaataactactataatggtagaattgctagaggtcatgtcaattggtacgacactctgaaaatcgaatgaa |
300 |
Q |
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||||||||||||| ||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||| |
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| T |
35857392 |
ataggatgctattcagtcatgaaaatattgaata---actataatgatagaattgctagaggtcatgtcaattggtacgactctctgaaaattgaatgag |
35857488 |
T |
|
| Q |
301 |
taaca |
305 |
Q |
| |
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||||| |
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| T |
35857489 |
taaca |
35857493 |
T |
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