View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20783_low_66 (Length: 294)
Name: NF20783_low_66
Description: NF20783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20783_low_66 |
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Alignment Details
Target: chr7 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 19 - 290
Target Start/End: Original strand, 45758864 - 45759134
Alignment:
| Q |
19 |
tctaaactctaaattggaaatcctaacgcatacatgcaaaaacaatttccactctgcaatattcaaagatgatcccaagttcacaacctcaataacaatc |
118 |
Q |
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| T |
45758864 |
tctaaactctaaattggaaatcctaacgcatacatgcaaaaacaatttccaccctgcaatattcaaagatgatcccaagttcacaacctcaataacatt- |
45758962 |
T |
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| Q |
119 |
taataaatctaacaataaaaactaacaacgaggtattaacaaggtgaaaaaagtagatgaaccattatgagataccaactgattatgatagtaattaaca |
218 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45758963 |
taataaatctaacaaaaaaaactaacaacgaggtattaacaaggggaaaaaagtagatgaaccattatgagataccaactgattatgatagtaattaaca |
45759062 |
T |
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| Q |
219 |
tgcatatttcttgttatatagtgaagatgttactgaatacacagtccatagtacaaaattgacattgttcat |
290 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45759063 |
tgcatatttcttgttatatagtgaagatgttactgaatacacagtccatagtacaaaattgacattgttcat |
45759134 |
T |
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