View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20783_low_69 (Length: 291)
Name: NF20783_low_69
Description: NF20783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20783_low_69 |
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Alignment Details
Target: chr3 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 44547394 - 44547671
Alignment:
| Q |
1 |
tcgattttgtttttgttggccgtttgtgttgcttcttaattgaaggatgaacttttttggtaggataatgaagtcaatccaaggaaagtggcagaattta |
100 |
Q |
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| T |
44547394 |
tcgattttgtttttgttggccgtctgtgttgcttcctaattgaaggatgaacttttttggtaggataatgaagtcaatccaaggaaagtggcagaattta |
44547493 |
T |
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| Q |
101 |
gagaaaaactcatgaaagaaattaacaggccttactgtgaggaagaacataagaaactatcaagagaaattaatgctcgaacaccggtccaaaaatacag |
200 |
Q |
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| T |
44547494 |
gagaaaaactcatgaaagaaattaacaggccttactgtgaggaagaacataagaaactatcaagagaaattaatgctcgaacaccggtccaaaaatacag |
44547593 |
T |
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| Q |
201 |
agatctgcgtgggagtagcaaaacctataagggagatcatgatggaaagtcttttcttgatcatcatcttggtaagta |
278 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44547594 |
agatctgcgtgggagtagcaaaacctataagggagatcatgatggaaagtcttttcttgatcatcatcttggtaagta |
44547671 |
T |
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