View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20783_low_72 (Length: 283)
Name: NF20783_low_72
Description: NF20783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20783_low_72 |
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| [»] scaffold0059 (1 HSPs) |
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| [»] scaffold0039 (1 HSPs) |
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| [»] scaffold0290 (1 HSPs) |
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| [»] scaffold0167 (1 HSPs) |
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| [»] scaffold0027 (1 HSPs) |
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| [»] scaffold0001 (1 HSPs) |
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| [»] scaffold1922 (1 HSPs) |
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| [»] scaffold0473 (1 HSPs) |
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| [»] scaffold0320 (1 HSPs) |
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| [»] scaffold0150 (1 HSPs) |
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| [»] scaffold0085 (1 HSPs) |
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| [»] scaffold0050 (1 HSPs) |
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| [»] scaffold0028 (1 HSPs) |
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| [»] scaffold0016 (1 HSPs) |
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| [»] scaffold0054 (1 HSPs) |
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| [»] scaffold0351 (1 HSPs) |
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| [»] scaffold0253 (2 HSPs) |
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| [»] scaffold0046 (1 HSPs) |
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| [»] scaffold0029 (1 HSPs) |
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| [»] scaffold0306 (1 HSPs) |
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| [»] scaffold0328 (1 HSPs) |
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| [»] scaffold0630 (1 HSPs) |
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| [»] scaffold0755 (1 HSPs) |
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| [»] scaffold0505 (1 HSPs) |
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| [»] scaffold0441 (1 HSPs) |
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| [»] scaffold0378 (3 HSPs) |
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| [»] scaffold0094 (1 HSPs) |
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| [»] scaffold0068 (2 HSPs) |
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| [»] scaffold0101 (1 HSPs) |
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| [»] scaffold0104 (1 HSPs) |
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| [»] scaffold0098 (1 HSPs) |
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| [»] scaffold0014 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 113; Significance: 3e-57; HSPs: 14)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 4 - 208
Target Start/End: Original strand, 24899823 - 24900027
Alignment:
| Q |
4 |
ctttcttagacctttgctactttatccattaagtctttgtcatgggattcttccccttgtagttattgttgtaagcatacttattctactcaaaggcaat |
103 |
Q |
| |
|
||||||||||||| || ||| || |||||| |||| |||||||||||||||| ||||||||||| ||| | ||||||||||| ||| ||||||||| | | |
|
|
| T |
24899823 |
ctttcttagacctctggtaccttctccattgagtccttgtcatgggattctttcccttgtagttgttgctataagcatactttttcaactcaaaggtagt |
24899922 |
T |
|
| Q |
104 |
accatttttgttgttatccacaatattggtgcttcttttcatcacattgttcttcccatgttacacattcttatgggtcgaccgaacccatttctggttg |
203 |
Q |
| |
|
|| ||||||||||||||| |||| | || |||||||||||| |||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||| |
|
|
| T |
24899923 |
acaatttttgttgttatcaacaacactgatgcttcttttcaccacattgttcttcccatgttgcacattcttatgggtagactgaacccatttctggttg |
24900022 |
T |
|
| Q |
204 |
ggtgc |
208 |
Q |
| |
|
||||| |
|
|
| T |
24900023 |
ggtgc |
24900027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 91 - 208
Target Start/End: Original strand, 22261413 - 22261530
Alignment:
| Q |
91 |
actcaaaggcaataccatttttgttgttatccacaatattggtgcttcttttcatcacattgttcttcccatgttacacattcttatgggtcgaccgaac |
190 |
Q |
| |
|
|||| |||||| |||||||||||||||| ||||||| ||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||| |||| |
|
|
| T |
22261413 |
actcgaaggcagtaccatttttgttgttctccacaacattggtgtttcttttcaccacattgtttttcccatgttgcacattcttatgggtcgactgaac |
22261512 |
T |
|
| Q |
191 |
ccatttctggttgggtgc |
208 |
Q |
| |
|
|||||| ||||| ||||| |
|
|
| T |
22261513 |
ccatttttggtttggtgc |
22261530 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 14891927 - 14891862
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| ||||||||||||||| | ||||||||| |
|
|
| T |
14891927 |
tgtcataccccaatttttgacctaaggccccactgacacatgtcacttgactctgatcgatctctg |
14891862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 22163052 - 22162987
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| ||||||||||| |||||||||| ||||||||||||||| | ||||||||| |
|
|
| T |
22163052 |
tgtcataccccaatttttgacctaagggcccactgacacatgtcacttgactctgatcgatctctg |
22162987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 274
Target Start/End: Original strand, 20733159 - 20733225
Alignment:
| Q |
208 |
ctgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
|||||||||||||||| |||||||||||||||| ||||| |||||||||||||| | ||||||||| |
|
|
| T |
20733159 |
ctgtcataccccaatttttgacctaaggccccattgacacgtgtcacttgactctgatcgatctctg |
20733225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 274
Target Start/End: Complemental strand, 22157044 - 22156978
Alignment:
| Q |
208 |
ctgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||| ||| ||||||||||||||| | ||||||||| |
|
|
| T |
22157044 |
ctgtcataccccaatttttgacctaagggcccactaacacatgtcacttgactctgatcgatctctg |
22156978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 15061401 - 15061336
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| |||||||| ||||| | ||||||||| |
|
|
| T |
15061401 |
tgtcataccccaatttttgacctaaggccccactgacacgtgtcacttaactctgatcgatctctg |
15061336 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 25859340 - 25859275
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| || |||||||| |||||| | ||||||||| |
|
|
| T |
25859340 |
tgtcataccccaatttttgacctaaggccccactgtcacatgtcactcgactctgatcgatctctg |
25859275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 32025719 - 32025654
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| |||||||||| ||||||||||| |||||||| || ||| | ||||||||| |
|
|
| T |
32025719 |
tgtcataccccaatttttgacctaagaccccactgacacatgtcactcgattctgatcgatctctg |
32025654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 274
Target Start/End: Original strand, 20725197 - 20725263
Alignment:
| Q |
208 |
ctgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||| |||| || ||||||||||| ||| ||| |||||||||||||| | ||||||||| |
|
|
| T |
20725197 |
ctgtcatacccaaattttttacctaaggcccgactaacacgtgtcacttgactctgatcgatctctg |
20725263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 274
Target Start/End: Original strand, 20738095 - 20738161
Alignment:
| Q |
208 |
ctgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||| |||| || ||||||||||| ||| ||| |||||||||||||| | ||||||||| |
|
|
| T |
20738095 |
ctgtcatacccaaattttttacctaaggcccgactaacacgtgtcacttgactctgatcgatctctg |
20738161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 24487981 - 24487931
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgac |
259 |
Q |
| |
|
||||||||||||||| ||||||||||| ||||||||| |||||| ||||| |
|
|
| T |
24487981 |
tgtcataccccaatttttgacctaaggtcccactgacgcatgtcatttgac |
24487931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 273
Target Start/End: Complemental strand, 25853096 - 25853031
Alignment:
| Q |
208 |
ctgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctct |
273 |
Q |
| |
|
|||||||||| ||||| || |||| ||||||||||||| |||||||| |||||| | |||||||| |
|
|
| T |
25853096 |
ctgtcatacctcaattttttgcctacggccccactgacacatgtcactcgactctgatcgatctct |
25853031 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 245
Target Start/End: Original strand, 45469474 - 45469510
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgac |
245 |
Q |
| |
|
||||||||||||||| ||||||||||||| ||||||| |
|
|
| T |
45469474 |
tgtcataccccaatttttgacctaaggcctcactgac |
45469510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 95; Significance: 2e-46; HSPs: 17)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 2 - 208
Target Start/End: Original strand, 22803990 - 22804196
Alignment:
| Q |
2 |
gcctttcttagacctttgctactttatccattaagtctttgtcatgggattcttccccttgtagttattgttgtaagcatacttattctactcaaaggca |
101 |
Q |
| |
|
|||||| || ||||| || ||| || |||||| |||| |||||||||| ||||| || |||||||| ||||||||||||||||| || ||||||||||| |
|
|
| T |
22803990 |
gccttttttggacctctggtaccttctccattgagtccttgtcatggggttctttcctttgtagttgttgttgtaagcatacttctttgactcaaaggca |
22804089 |
T |
|
| Q |
102 |
ataccatttttgttgttatccacaatattggtgcttcttttcatcacattgttcttcccatgttacacattcttatgggtcgaccgaacccatttctggt |
201 |
Q |
| |
|
||||||||||||||| | | | | || | |||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |
|
|
| T |
22804090 |
gtaccatttttgttgtcaacaatagtactattgcttcttttcaccacattgttcttcccatgttgcacattcttatgggtcgactgaacccatttctggt |
22804189 |
T |
|
| Q |
202 |
tgggtgc |
208 |
Q |
| |
|
| ||||| |
|
|
| T |
22804190 |
taggtgc |
22804196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 274
Target Start/End: Complemental strand, 20092819 - 20092753
Alignment:
| Q |
208 |
ctgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||| ||||||||||||||| | ||||||||| |
|
|
| T |
20092819 |
ctgtcataccccaatttttgacctaaggccccactgacacatgtcacttgactctgatcgatctctg |
20092753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 274
Target Start/End: Original strand, 36448249 - 36448314
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| ||||||||||||||| | ||||||||| |
|
|
| T |
36448249 |
tgtcataccccaatttttgacctaaggccccactgacacatgtcacttgactctgatcgatctctg |
36448314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 208 - 274
Target Start/End: Complemental strand, 20639929 - 20639863
Alignment:
| Q |
208 |
ctgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||| |||||||| |||||| | ||||||||| |
|
|
| T |
20639929 |
ctgtcataccccaatttttgacctaaggccccactgacacatgtcactcgactctgatcgatctctg |
20639863 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 20099715 - 20099650
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| ||| ||||||||||||||| | ||||||||| |
|
|
| T |
20099715 |
tgtcataccccaatttttgacctaaggccccactaacacatgtcacttgactctgatcgatctctg |
20099650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 23378366 - 23378301
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||| ||||| |||||||||||||||||||||| ||||||||||||||| | ||||||||| |
|
|
| T |
23378366 |
tgtcatacctcaatttttgacctaaggccccactgacacatgtcacttgactctgatcgatctctg |
23378301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 211 - 274
Target Start/End: Complemental strand, 26186712 - 26186649
Alignment:
| Q |
211 |
tcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| |||||||| |||||| | ||||||||| |
|
|
| T |
26186712 |
tcataccccaatttttgacctaaggccccactgacacatgtcactcgactctgatcgatctctg |
26186649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 274
Target Start/End: Original strand, 25526187 - 25526253
Alignment:
| Q |
208 |
ctgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||| |||||||| || ||| | ||||||||| |
|
|
| T |
25526187 |
ctgtcataccccaatttttgacctaaggccccactgacacatgtcactcgaatctgatcgatctctg |
25526253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 274
Target Start/End: Original strand, 25532867 - 25532933
Alignment:
| Q |
208 |
ctgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
|||||||| ||||||| |||||||||||||||||||||| |||||||| |||||| | ||||||||| |
|
|
| T |
25532867 |
ctgtcatatcccaatttttgacctaaggccccactgacacatgtcactcgactctgatcgatctctg |
25532933 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 274
Target Start/End: Original strand, 36454626 - 36454692
Alignment:
| Q |
208 |
ctgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
|||||||||||||||| ||||||||||||| ||| |||| ||||||||||||||| | ||||||||| |
|
|
| T |
36454626 |
ctgtcataccccaatttttgacctaaggcctcacggacacatgtcacttgactctgatcgatctctg |
36454692 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 15957047 - 15956982
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| ||||||||||| ||||||||| ||||||||||||||| | ||||||||| |
|
|
| T |
15957047 |
tgtcataccccaatttttgacctaaggttccactgacacatgtcacttgactctgatcgatctctg |
15956982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 209 - 274
Target Start/End: Original strand, 40014876 - 40014941
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| ||||| ||||| |||||||||| ||||||||||||||| | ||||||||| |
|
|
| T |
40014876 |
tgtcataccccaatttttgacttaaggtcccactgacacatgtcacttgactctgatcgatctctg |
40014941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 37048342 - 37048409
Alignment:
| Q |
207 |
gctgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
|||||||||||| |||| |||||||||| |||||||||| |||||||||||||| | ||||||||| |
|
|
| T |
37048342 |
gctgtcatacccaaatttttgacctaagatcccactgacacgtgtcacttgactctgatcgatctctg |
37048409 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 246
Target Start/End: Original strand, 21696071 - 21696109
Alignment:
| Q |
208 |
ctgtcataccccaattgttgacctaaggccccactgaca |
246 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
21696071 |
ctgtcataccccaatttttgacctaaggtcccactgaca |
21696109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 246
Target Start/End: Complemental strand, 26553332 - 26553294
Alignment:
| Q |
208 |
ctgtcataccccaattgttgacctaaggccccactgaca |
246 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
26553332 |
ctgtcataccccaatttttgacctaaggtcccactgaca |
26553294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 246
Target Start/End: Original strand, 29901228 - 29901266
Alignment:
| Q |
208 |
ctgtcataccccaattgttgacctaaggccccactgaca |
246 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
29901228 |
ctgtcataccccaatttttgacctaaggtcccactgaca |
29901266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 21688153 - 21688190
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgaca |
246 |
Q |
| |
|
||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
21688153 |
tgtcataccccaatttttgacctaaggtcccactgaca |
21688190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 77; Significance: 9e-36; HSPs: 17)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 40 - 208
Target Start/End: Complemental strand, 18217894 - 18217726
Alignment:
| Q |
40 |
ttgtcatgggattcttccccttgtagttattgttgtaagcatacttattctactcaaaggcaataccatttttgttgttatccacaatattggtgcttct |
139 |
Q |
| |
|
||||||| ||||| || ||||||||||| | | ||||||||||| ||| ||||||||||| |||||||||||||||||||||||| | | ||| ||| |
|
|
| T |
18217894 |
ttgtcataggattatttcccttgtagtttcttctataagcatacttcttcgactcaaaggcagtaccatttttgttgttatccacaacacttgtgtttcc |
18217795 |
T |
|
| Q |
140 |
tttcatcacattgttcttcccatgttacacattcttatgggtcgaccgaacccatttctggttgggtgc |
208 |
Q |
| |
|
||||| || ||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||| ||||| |
|
|
| T |
18217794 |
tttcaccatattgttcttcccatgttgcacattcttgtgggtcgactgaacccatttttggtttggtgc |
18217726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 103 - 208
Target Start/End: Complemental strand, 21312340 - 21312235
Alignment:
| Q |
103 |
taccatttttgttgttatccacaatattggtgcttcttttcatcacattgttcttcccatgttacacattcttatgggtcgaccgaacccatttctggtt |
202 |
Q |
| |
|
|||||||||||||||||||||||| | | ||| ||||||||| |||||||||||||||||| | ||||||||||||||||||| |||||||||| ||||| |
|
|
| T |
21312340 |
taccatttttgttgttatccacaacacttgtgtttcttttcaccacattgttcttcccatgctgcacattcttatgggtcgactgaacccatttttggtt |
21312241 |
T |
|
| Q |
203 |
gggtgc |
208 |
Q |
| |
|
|||||| |
|
|
| T |
21312240 |
gggtgc |
21312235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 193
Target Start/End: Original strand, 17019923 - 17020085
Alignment:
| Q |
28 |
tccattaagtctttgtcatgggattcttccccttgtagttattgttgtaagcatacttattctactcaaaggcaataccatttttgttgttatccacaat |
127 |
Q |
| |
|
|||||| |||| |||||||||| ||||||||||||| || ||||||||||| |||| || || |||||||| |||||||||||| ||| ||||| |
|
|
| T |
17019923 |
tccattgagtccttgtcatgggggtcttccccttgtaattgctgttgtaagcaaacttctttgacgcaaaggcatcaccatttttgtt---atcaacaat |
17020019 |
T |
|
| Q |
128 |
attggtgcttcttttcatcacattgttcttcccatgttacacattcttatgggtcgaccgaaccca |
193 |
Q |
| |
|
||||| ||| ||||| ||||||||| |||||||||| ||||||||||||||||||| ||||||| |
|
|
| T |
17020020 |
tatggtgtttcatttcaccacattgtttttcccatgttgcacattcttatgggtcgactgaaccca |
17020085 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 274
Target Start/End: Original strand, 19367474 - 19367540
Alignment:
| Q |
208 |
ctgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||| ||||||||||||||| | ||||||||| |
|
|
| T |
19367474 |
ctgtcataccccaatttttgacctaaggccccactgacacatgtcacttgactctgatcgatctctg |
19367540 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 274
Target Start/End: Original strand, 35070035 - 35070100
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| ||||||||||||||| | ||||||||| |
|
|
| T |
35070035 |
tgtcataccccaatttttgacctaaggccccactgacacatgtcacttgactctgatcgatctctg |
35070100 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 208 - 259
Target Start/End: Complemental strand, 2336123 - 2336072
Alignment:
| Q |
208 |
ctgtcataccccaattgttgacctaaggccccactgacatatgtcacttgac |
259 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||| |||||||||||| |
|
|
| T |
2336123 |
ctgtcataccccaatttttgacctaaggccccactgacacatgtcacttgac |
2336072 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 274
Target Start/End: Original strand, 1961637 - 1961703
Alignment:
| Q |
208 |
ctgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||| || ||||||||||| | ||||||||| |
|
|
| T |
1961637 |
ctgtcataccccaatttttgacctaaggccccactgacacataacacttgactctgatcgatctctg |
1961703 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 209 - 274
Target Start/End: Original strand, 18098375 - 18098440
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| || ||||||||||||||| ||| ||||||||||||||| | ||||||||| |
|
|
| T |
18098375 |
tgtcataccccaatttttaacctaaggccccactaacacatgtcacttgactctgatcgatctctg |
18098440 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 209 - 274
Target Start/End: Original strand, 20429353 - 20429418
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| ||||||||||| |||||||||| |||||||||||||| | ||||||||| |
|
|
| T |
20429353 |
tgtcataccccaatttttgacctaaggtcccactgacacttgtcacttgactctgatcgatctctg |
20429418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 22116416 - 22116351
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| |||||||| ||||| | ||||||||| |
|
|
| T |
22116416 |
tgtcataccccaatttttgacctaaggccccactgacacatgtcactcaactctgatcgatctctg |
22116351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 16884518 - 16884555
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgaca |
246 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
16884518 |
tgtcataccccaatttttgacctaaggccccactgaca |
16884555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 44832621 - 44832556
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||| ||||||| || ||||||||| |||||||| ||||||||||||||| | ||||||||| |
|
|
| T |
44832621 |
tgtcatatcccaatttttaacctaaggcttcactgacacatgtcacttgactctgatcgatctctg |
44832556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 21307628 - 21307569
Alignment:
| Q |
140 |
tttcatcacattgttcttcccatgttacacattcttatgggtcgaccgaacccatttctg |
199 |
Q |
| |
|
||||| ||||||||||||| ||| || ||||| ||||||||||||||| |||||||||| |
|
|
| T |
21307628 |
tttcaccacattgttcttcgcatattggacatttttatgggtcgaccgagcccatttctg |
21307569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 274
Target Start/End: Original strand, 1955829 - 1955883
Alignment:
| Q |
220 |
aattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
|||| |||||||||||||||||||||| | |||||||||||| | ||||||||| |
|
|
| T |
1955829 |
aatttttgacctaaggccccactgacacgtatcacttgactctgatcgatctctg |
1955883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 22840214 - 22840177
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgaca |
246 |
Q |
| |
|
||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
22840214 |
tgtcataccccaatttttgacctaaggtcccactgaca |
22840177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 274
Target Start/End: Original strand, 47108373 - 47108438
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||| || |||| || |||||||| |||||| ||| ||||||||||||||| | ||||||||| |
|
|
| T |
47108373 |
tgtcatatcctaatttttaacctaaggtcccacttacacatgtcacttgactctgatcgatctctg |
47108438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 22616398 - 22616342
Alignment:
| Q |
141 |
ttcatcacattgttcttcccatgttacacattcttatgggtcgaccgaacccatttc |
197 |
Q |
| |
|
|||| ||||||||||||||||| | ||||||||||||||||| ||||||||||| |
|
|
| T |
22616398 |
ttcaccacattgttcttcccatactgaacattcttatgggtcgaatgaacccatttc |
22616342 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 74; Significance: 5e-34; HSPs: 12)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 3 - 208
Target Start/End: Original strand, 2284480 - 2284685
Alignment:
| Q |
3 |
cctttcttagacctttgctactttatccattaagtctttgtcatgggattcttccccttgtagttattgttgtaagcatacttattctactcaaaggcaa |
102 |
Q |
| |
|
|||||||||||||| || || || ||| ||| || ||||||| |||| ||| ||| ||||||| ||| | |||||| |||| ||| ||||||||| | |
|
|
| T |
2284480 |
cctttcttagacctctggaaccttctccgttatgttcttgtcattggatactttcccatgtagttgttgctataagcaaacttcttcaactcaaaggtag |
2284579 |
T |
|
| Q |
103 |
taccatttttgttgttatccacaatattggtgcttcttttcatcacattgttcttcccatgttacacattcttatgggtcgaccgaacccatttctggtt |
202 |
Q |
| |
|
||| |||||| ||||||||||||| | ||||| ||||||||| |||||||||||||||||||| ||||| ||||||||| ||| ||||||| || ||||| |
|
|
| T |
2284580 |
tacgatttttattgttatccacaacactggtgtttcttttcaccacattgttcttcccatgttgcacatacttatgggttgactgaacccaattttggtt |
2284679 |
T |
|
| Q |
203 |
gggtgc |
208 |
Q |
| |
|
|||||| |
|
|
| T |
2284680 |
gggtgc |
2284685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 274
Target Start/End: Complemental strand, 34132888 - 34132822
Alignment:
| Q |
208 |
ctgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||| ||||||||||||||| | ||||||||| |
|
|
| T |
34132888 |
ctgtcataccccaatttttgacctaaggccccactgacacatgtcacttgactctgatcgatctctg |
34132822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 274
Target Start/End: Original strand, 22346867 - 22346932
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| ||| |||||||||||||||||| ||||||||||||||| | ||||||||| |
|
|
| T |
22346867 |
tgtcataccccaatttttgtcctaaggccccactgacacatgtcacttgactctgatcgatctctg |
22346932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 18779130 - 18779065
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| ||||||||||||||| |||||| |||||||| |||||| | ||||||||| |
|
|
| T |
18779130 |
tgtcataccccaatttttgacctaaggccccgctgacacatgtcactcgactctaatcgatctctg |
18779065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 34139199 - 34139134
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| |||| ||||||| ||||||||| ||||||||||||||| | ||||||||| |
|
|
| T |
34139199 |
tgtcataccccaatttttgatctaaggctccactgacacatgtcacttgactctgatcgatctctg |
34139134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 206 - 258
Target Start/End: Original strand, 43906096 - 43906148
Alignment:
| Q |
206 |
tgctgtcataccccaattgttgacctaaggccccactgacatatgtcacttga |
258 |
Q |
| |
|
|||| ||||||||||||| |||||||||||||||||||||| ||||||||||| |
|
|
| T |
43906096 |
tgctatcataccccaatttttgacctaaggccccactgacacatgtcacttga |
43906148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 260
Target Start/End: Complemental strand, 1858632 - 1858581
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgact |
260 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| |||||||| |||| |
|
|
| T |
1858632 |
tgtcataccccaatttttgacctaaggccccactgacacatgtcactcgact |
1858581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 274
Target Start/End: Original strand, 28415150 - 28415215
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| || |||||||||||| |||||| |||||||| |||||| | ||||||||| |
|
|
| T |
28415150 |
tgtcataccccaattttttacctaaggccccgctgacacatgtcactcgactctgatcgatctctg |
28415215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 274
Target Start/End: Complemental strand, 13270953 - 13270887
Alignment:
| Q |
208 |
ctgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
|||||||| |||||| |||||||||||||||||||||| |||||||| || ||| | ||||||||| |
|
|
| T |
13270953 |
ctgtcatattccaatttttgacctaaggccccactgacacatgtcactcgagtctgatcgatctctg |
13270887 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 246
Target Start/End: Original strand, 15683151 - 15683189
Alignment:
| Q |
208 |
ctgtcataccccaattgttgacctaaggccccactgaca |
246 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
15683151 |
ctgtcataccccaatttttgacctaaggtcccactgaca |
15683189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 246
Target Start/End: Complemental strand, 42631325 - 42631287
Alignment:
| Q |
208 |
ctgtcataccccaattgttgacctaaggccccactgaca |
246 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
42631325 |
ctgtcataccccaatttttgacctaaggtcccactgaca |
42631287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 273
Target Start/End: Complemental strand, 6852078 - 6852014
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctct |
273 |
Q |
| |
|
||||||||||||||| || |||||||| |||||||||| ||| | || |||||| | |||||||| |
|
|
| T |
6852078 |
tgtcataccccaatttttaacctaaggtcccactgacacatgccgctcgactctgatcgatctct |
6852014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 74; Significance: 5e-34; HSPs: 12)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 43 - 208
Target Start/End: Complemental strand, 24987789 - 24987624
Alignment:
| Q |
43 |
tcatgggattcttccccttgtagttattgttgtaagcatacttattctactcaaaggcaataccatttttgttgttatccacaatattggtgcttctttt |
142 |
Q |
| |
|
|||||||||| || ||||||||||| ||| | |||||| |||| ||| ||||||||| | ||||||||||||| ||||| |||| | ||||| ||||||| |
|
|
| T |
24987789 |
tcatgggattatttcccttgtagttgttgctataagcaaacttcttcgactcaaaggtagtaccatttttgttattatcaacaacactggtggttctttt |
24987690 |
T |
|
| Q |
143 |
catcacattgttcttcccatgttacacattcttatgggtcgaccgaacccatttctggttgggtgc |
208 |
Q |
| |
|
|| | |||||||||| ||||||| ||||||||||||||| || |||||||||| ||||||||||| |
|
|
| T |
24987689 |
caccgcattgttcttaccatgttgcacattcttatgggtagattgaacccatttttggttgggtgc |
24987624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 93 - 208
Target Start/End: Complemental strand, 25566702 - 25566587
Alignment:
| Q |
93 |
tcaaaggcaataccatttttgttgttatccacaatattggtgcttcttttcatcacattgttcttcccatgttacacattcttatgggtcgaccgaaccc |
192 |
Q |
| |
|
||||||| || |||||||||||| |||||||||| | ||||| ||||| ||| || ||||||||||||||||| ||||||||||||||||||| |||||| |
|
|
| T |
25566702 |
tcaaagggaacaccatttttgttattatccacaacactggtgtttcttgtcaccatattgttcttcccatgttgcacattcttatgggtcgactgaaccc |
25566603 |
T |
|
| Q |
193 |
atttctggttgggtgc |
208 |
Q |
| |
|
|||| ||||| ||||| |
|
|
| T |
25566602 |
atttttggttaggtgc |
25566587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 20279397 - 20279332
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| ||||||||||||||| | ||||||||| |
|
|
| T |
20279397 |
tgtcataccccaatttttgacctaaggccccactgacacatgtcacttgactctgatcgatctctg |
20279332 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 18500224 - 18500291
Alignment:
| Q |
207 |
gctgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||| | ||||||||| |
|
|
| T |
18500224 |
gctgtcataccccaatttttgatctaaggccccactgacacatgtcacttgactctgatcgatctctg |
18500291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 18354 - 18289
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||| | ||||||||||||||| | ||||||||| |
|
|
| T |
18354 |
tgtcataccccaatttttgacctaaggccccactgagacatgtcacttgactctgatcgatctctg |
18289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 274
Target Start/End: Original strand, 11873682 - 11873747
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| |||||||||| ||||||||||| ||||||||||||||| | ||||||||| |
|
|
| T |
11873682 |
tgtcataccccaatttttgacctaagaccccactgacacatgtcacttgactctgatcgatctctg |
11873747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 38084533 - 38084468
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| |||||||| |||||| | ||||||||| |
|
|
| T |
38084533 |
tgtcataccccaatttttgacctaaggccccactgacacatgtcactcgactctgatcgatctctg |
38084468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 36735333 - 36735386
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactct |
262 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| |||||||| |||||| |
|
|
| T |
36735333 |
tgtcataccccaatttttgacctaaggccccactgacacatgtcactcgactct |
36735386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 208 - 274
Target Start/End: Complemental strand, 5871177 - 5871111
Alignment:
| Q |
208 |
ctgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||| || ||||| |||||| | ||||||||| |
|
|
| T |
5871177 |
ctgtcataccccaatttttgacctaagggcccactgacacatatcactcgactctgatcgatctctg |
5871111 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 5874317 - 5874252
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| ||||||||||| ||||||||| |||||||| |||||| | ||||||||| |
|
|
| T |
5874317 |
tgtcataccccaatttttgacctaagggtccactgacacatgtcactcgactctgatcgatctctg |
5874252 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 231 - 274
Target Start/End: Original strand, 29586096 - 29586139
Alignment:
| Q |
231 |
taaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| | ||||||||| |
|
|
| T |
29586096 |
taaggccccactgacacatgtcacttgactctgatcgatctctg |
29586139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 22519028 - 22518991
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgaca |
246 |
Q |
| |
|
||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
22519028 |
tgtcataccccaatttttgacctaaggtcccactgaca |
22518991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 73; Significance: 2e-33; HSPs: 25)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 40 - 208
Target Start/End: Original strand, 16922451 - 16922619
Alignment:
| Q |
40 |
ttgtcatgggattcttccccttgtagttattgttgtaagcatacttattctactcaaaggcaataccatttttgttgttatccacaatattggtgcttct |
139 |
Q |
| |
|
||||||||||||| || |||||||||| |||| | || | |||| || ||||||||||| |||||||||||||||||||||||| | ||||| |||| |
|
|
| T |
16922451 |
ttgtcatgggattatttaccttgtagttgttgtaatgagaaaacttcctcgactcaaaggcagtaccatttttgttgttatccacaacactggtgtttct |
16922550 |
T |
|
| Q |
140 |
tttcatcacattgttcttcccatgttacacattcttatgggtcgaccgaacccatttctggttgggtgc |
208 |
Q |
| |
|
||||| || ||||||||||||||||| ||||||||| |||||||| |||||||||| ||||| ||||| |
|
|
| T |
16922551 |
tttcaccatattgttcttcccatgttgcacattcttgtgggtcgattgaacccatttttggtttggtgc |
16922619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 273
Target Start/End: Complemental strand, 4313661 - 4313596
Alignment:
| Q |
208 |
ctgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctct |
273 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||| ||||||||||||||| | |||||||| |
|
|
| T |
4313661 |
ctgtcataccccaatttttgacctaaggccccactgacacatgtcacttgactctgatcgatctct |
4313596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 13111852 - 13111787
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| ||||||||||||||| | ||||||||| |
|
|
| T |
13111852 |
tgtcataccccaatttttgacctaaggccccactgacacatgtcacttgactctgatcgatctctg |
13111787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 14893211 - 14893146
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| ||||||||||||||| | ||||||||| |
|
|
| T |
14893211 |
tgtcataccccaatttttgacctaaggccccactgacacatgtcacttgactctgatcgatctctg |
14893146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 16031324 - 16031259
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| ||||||||||||||| | ||||||||| |
|
|
| T |
16031324 |
tgtcataccccaatttttgacctaaggccccactgacacatgtcacttgactctgatcgatctctg |
16031259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 21638626 - 21638561
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| ||||||||||||||| | ||||||||| |
|
|
| T |
21638626 |
tgtcataccccaatttttgacctaaggccccactgacacatgtcacttgactctgatcgatctctg |
21638561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 209 - 271
Target Start/End: Original strand, 261364 - 261426
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatct |
271 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| ||||||||||||||| | |||||| |
|
|
| T |
261364 |
tgtcataccccaatttttgacctaaggccccactgacacatgtcacttgactctgatcgatct |
261426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 208 - 274
Target Start/End: Complemental strand, 13105705 - 13105639
Alignment:
| Q |
208 |
ctgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||| |||| |||||||||||||||||||||| ||||||||||||||| | ||||||||| |
|
|
| T |
13105705 |
ctgtcataccctaatttttgacctaaggccccactgacacatgtcacttgactctgatcgatctctg |
13105639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 208 - 274
Target Start/End: Complemental strand, 14881381 - 14881315
Alignment:
| Q |
208 |
ctgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| |||| ||||||||||||||| | ||||||||| |
|
|
| T |
14881381 |
ctgtcataccccaatttttgacctaaggccccaccgacacatgtcacttgactctgatcgatctctg |
14881315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 14888106 - 14888041
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| |||||||||||| ||||||||| ||||||||||||||| | ||||||||| |
|
|
| T |
14888106 |
tgtcataccccaatttttgacctaaggctccactgacacatgtcacttgactctgatcgatctctg |
14888041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 23288187 - 23288122
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| ||| ||||||||||||||| | ||||||||| |
|
|
| T |
23288187 |
tgtcataccccaatttttgacctaaggccccacttacacatgtcacttgactctgatcgatctctg |
23288122 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 209 - 274
Target Start/End: Original strand, 11180760 - 11180825
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| || ||||||||||||||||||| |||||||| |||||| | ||||||||| |
|
|
| T |
11180760 |
tgtcataccccaatttttaacctaaggccccactgacacatgtcactcgactctgatcgatctctg |
11180825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 209 - 262
Target Start/End: Complemental strand, 48060795 - 48060742
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactct |
262 |
Q |
| |
|
||||||||||||||| ||||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
48060795 |
tgtcataccccaatttttgacctaaggcctcactgacacatgtcacttgactct |
48060742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 271
Target Start/End: Original strand, 74237 - 74300
Alignment:
| Q |
208 |
ctgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatct |
271 |
Q |
| |
|
|||||||||||||||| ||||||||| ||||||||| || ||||||||||||||| | |||||| |
|
|
| T |
74237 |
ctgtcataccccaatttttgacctaacgccccactggcacatgtcacttgactctgatcgatct |
74300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 209 - 271
Target Start/End: Original strand, 68145 - 68207
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatct |
271 |
Q |
| |
|
||||||||||||||| ||||||||| ||||||||| || ||||||||||||||| | |||||| |
|
|
| T |
68145 |
tgtcataccccaatttttgacctaacgccccactggcacatgtcacttgactctgatcgatct |
68207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 208 - 274
Target Start/End: Complemental strand, 30102518 - 30102452
Alignment:
| Q |
208 |
ctgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
|||||||| ||||||| ||||| |||||||||||||| | ||||||||||||||| | ||||||||| |
|
|
| T |
30102518 |
ctgtcatatcccaatttttgacttaaggccccactgatacatgtcacttgactctgatcgatctctg |
30102452 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 274
Target Start/End: Original strand, 3404752 - 3404817
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| || ||||||||||||||||||| |||||| | |||||| | ||||||||| |
|
|
| T |
3404752 |
tgtcataccccaattttttacctaaggccccactgacacatgtcattcgactctaatcgatctctg |
3404817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 12550412 - 12550476
Alignment:
| Q |
210 |
gtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
|||||||||||||| |||||||||||||||| ||||| |||||||| ||||| | ||||||||| |
|
|
| T |
12550412 |
gtcataccccaatttttgacctaaggccccagtgacacatgtcactcgactccgatcgatctctg |
12550476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 274
Target Start/End: Original strand, 8612621 - 8612687
Alignment:
| Q |
208 |
ctgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
|||||||||||||||| |||||||||| |||||||| | |||||||| |||||| | ||||||||| |
|
|
| T |
8612621 |
ctgtcataccccaatttttgacctaagagcccactgagacatgtcactcgactctgatcgatctctg |
8612687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 49967354 - 49967404
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgac |
259 |
Q |
| |
|
|||||||||| |||| |||||||||||||||||||||| ||||||||||| |
|
|
| T |
49967354 |
tgtcataccctaatttttgacctaaggccccactgacacgtgtcacttgac |
49967404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 274
Target Start/End: Original strand, 8606162 - 8606227
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| |||||||||| |||||||| | |||||||| |||||| | ||||||||| |
|
|
| T |
8606162 |
tgtcataccccaatttttgacctaagagcccactgaaacatgtcactcgactctaatcgatctctg |
8606227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 37470141 - 37470189
Alignment:
| Q |
211 |
tcataccccaattgttgacctaaggccccactgacatatgtcacttgac |
259 |
Q |
| |
|
||||||||||||| |||||||||||||||||| ||| ||||||||||| |
|
|
| T |
37470141 |
tcataccccaatttttgacctaaggccccactaacacgtgtcacttgac |
37470189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 13086554 - 13086604
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgac |
259 |
Q |
| |
|
||||||||||||||| ||||||||||| |||||| ||| |||||| ||||| |
|
|
| T |
13086554 |
tgtcataccccaatttttgacctaaggtcccactaacacatgtcatttgac |
13086604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 18706267 - 18706304
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgaca |
246 |
Q |
| |
|
||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
18706267 |
tgtcataccccaatttttgacctaaggtcccactgaca |
18706304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 245
Target Start/End: Complemental strand, 15610554 - 15610518
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgac |
245 |
Q |
| |
|
||||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
15610554 |
tgtcataccccaatttttgacctaaggtcccactgac |
15610518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0059 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0059
Description:
Target: scaffold0059; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 196
Target Start/End: Original strand, 35181 - 35329
Alignment:
| Q |
40 |
ttgtcatgggattcttccccttgtagttattgttgtaagcatacttattctactcaaaggcaataccatttttgttgttatccacaatattggtgcttct |
139 |
Q |
| |
|
|||||||||| |||||||||||||| || ||||||||||||||||| || |||||||||||||||||| |||| ||| || |||||||| |
|
|
| T |
35181 |
ttgtcatggggttcttccccttgtaattgttgttgtaagcatacttctttgactcaaaggcaataccat--------ttataaacagtactggtgctttc |
35272 |
T |
|
| Q |
140 |
tttcatcacattgttcttcccatgttacacattcttatgggtcgaccgaacccattt |
196 |
Q |
| |
|
||||| |||||| || |||||||||| |||||||||||| |||||| |||||||||| |
|
|
| T |
35273 |
tttcaccacattatttttcccatgttgcacattcttatgagtcgactgaacccattt |
35329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0039 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0039
Description:
Target: scaffold0039; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 211 - 274
Target Start/End: Complemental strand, 89937 - 89874
Alignment:
| Q |
211 |
tcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||| |
|
|
| T |
89937 |
tcataccccaatttttgacctaaggccccactgacatatgtcacttgactcttatcgatctctg |
89874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 51; Significance: 3e-20; HSPs: 17)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 274
Target Start/End: Complemental strand, 18961063 - 18960997
Alignment:
| Q |
208 |
ctgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||| ||||||||||||||| | ||||||||| |
|
|
| T |
18961063 |
ctgtcataccccaatttttgacctaaggccccactgacacatgtcacttgactctgatcgatctctg |
18960997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 12667603 - 12667538
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| ||||||||||||||| | ||||||||| |
|
|
| T |
12667603 |
tgtcataccccaatttttgacctaaggccccactgacacatgtcacttgactctgatcgatctctg |
12667538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 28702953 - 28702888
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| ||||||||||||||| | ||||||||| |
|
|
| T |
28702953 |
tgtcataccccaatttttgacctaaggccccactgacacatgtcacttgactctgatcgatctctg |
28702888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 208 - 274
Target Start/End: Complemental strand, 20452724 - 20452658
Alignment:
| Q |
208 |
ctgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
|||||||||||||||| |||||||||||| ||||||||| ||||||||||||||| | ||||||||| |
|
|
| T |
20452724 |
ctgtcataccccaatttttgacctaaggctccactgacacatgtcacttgactctgatcgatctctg |
20452658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 274
Target Start/End: Original strand, 19713680 - 19713745
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| |||||||| |||||| | ||||||||| |
|
|
| T |
19713680 |
tgtcataccccaatttttgacctaaggccccactgacacatgtcactcgactctgatcgatctctg |
19713745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 262
Target Start/End: Original strand, 19719835 - 19719889
Alignment:
| Q |
208 |
ctgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactct |
262 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||| |||||||| |||||| |
|
|
| T |
19719835 |
ctgtcataccccaatttttgacctaaggccccactgacacatgtcactcgactct |
19719889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 209 - 262
Target Start/End: Complemental strand, 20459524 - 20459471
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactct |
262 |
Q |
| |
|
||||||||||||||| |||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
20459524 |
tgtcataccccaatttttgacctaaggccccagtgacacatgtcacttgactct |
20459471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 22779205 - 22779140
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| ||||||||| |||||||||||| |||||||||||||| | ||||||||| |
|
|
| T |
22779205 |
tgtcataccccaatttttgacctaatgccccactgacacgtgtcacttgactctgatcgatctctg |
22779140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 26896467 - 26896520
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactct |
262 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| ||||||||| ||||| |
|
|
| T |
26896467 |
tgtcataccccaatttttgacctaaggccccactgacacatgtcacttaactct |
26896520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 274
Target Start/End: Original strand, 14176931 - 14176988
Alignment:
| Q |
217 |
cccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||| |||||||||||||||||||||| |||||||| |||||| | ||||||||| |
|
|
| T |
14176931 |
cccaatttttgacctaaggccccactgacacatgtcactcgactctgatcgatctctg |
14176988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 17784136 - 17784071
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
|||||||| |||||| |||||||||||| ||||||||| |||||||| |||||| | ||||||||| |
|
|
| T |
17784136 |
tgtcatacaccaatttttgacctaaggctccactgacacatgtcactcgactctgatcgatctctg |
17784071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 262
Target Start/End: Complemental strand, 10985141 - 10985087
Alignment:
| Q |
208 |
ctgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactct |
262 |
Q |
| |
|
|||| ||||||||||| |||||||||| ||||||| ||| ||||||||||||||| |
|
|
| T |
10985141 |
ctgtaataccccaatttttgacctaagaccccactaacacatgtcacttgactct |
10985087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 262
Target Start/End: Original strand, 19898949 - 19899003
Alignment:
| Q |
208 |
ctgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactct |
262 |
Q |
| |
|
||||||||||| |||| ||||||||||||||||||| || |||||||| |||||| |
|
|
| T |
19898949 |
ctgtcatacccaaatttttgacctaaggccccactggcacatgtcactcgactct |
19899003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 246
Target Start/End: Original strand, 19169105 - 19169143
Alignment:
| Q |
208 |
ctgtcataccccaattgttgacctaaggccccactgaca |
246 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
19169105 |
ctgtcataccccaatttttgacctaaggtcccactgaca |
19169143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 246
Target Start/End: Complemental strand, 24143632 - 24143594
Alignment:
| Q |
208 |
ctgtcataccccaattgttgacctaaggccccactgaca |
246 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
24143632 |
ctgtcataccccaatttttgacctaaggtcccactgaca |
24143594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 24150121 - 24150084
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgaca |
246 |
Q |
| |
|
||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
24150121 |
tgtcataccccaatttttgacctaaggtcccactgaca |
24150084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 245
Target Start/End: Complemental strand, 20058903 - 20058867
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgac |
245 |
Q |
| |
|
||||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
20058903 |
tgtcataccccaatttttgacctaaggtcccactgac |
20058867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0290 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0290
Description:
Target: scaffold0290; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 274
Target Start/End: Original strand, 22046 - 22111
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| ||||||||||||||| | ||||||||| |
|
|
| T |
22046 |
tgtcataccccaatttttgacctaaggccccactgacacatgtcacttgactctgatcgatctctg |
22111 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0167 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0167
Description:
Target: scaffold0167; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 274
Target Start/End: Original strand, 7980 - 8045
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| ||||||||||||||| | ||||||||| |
|
|
| T |
7980 |
tgtcataccccaatttttgacctaaggccccactgacacatgtcacttgactctgatcgatctctg |
8045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0027 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0027
Description:
Target: scaffold0027; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 274
Target Start/End: Original strand, 23583 - 23648
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| ||||||||||||||| | ||||||||| |
|
|
| T |
23583 |
tgtcataccccaatttttgacctaaggccccactgacacatgtcacttgactctgatcgatctctg |
23648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 274
Target Start/End: Original strand, 96782 - 96847
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| ||||||||||||||| | ||||||||| |
|
|
| T |
96782 |
tgtcataccccaatttttgacctaaggccccactgacacatgtcacttgactctgatcgatctctg |
96847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 50; Significance: 1e-19; HSPs: 11)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 19738074 - 19738009
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| ||||||||||||||| | ||||||||| |
|
|
| T |
19738074 |
tgtcataccccaatttttgacctaaggccccactgacacatgtcacttgactctgatcgatctctg |
19738009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 274
Target Start/End: Original strand, 20548381 - 20548446
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| ||||||||||||||| | ||||||||| |
|
|
| T |
20548381 |
tgtcataccccaatttttgacctaaggccccactgacacatgtcacttgactctgatcgatctctg |
20548446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 274
Target Start/End: Original strand, 20555005 - 20555070
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| ||||||||||||||| | ||||||||| |
|
|
| T |
20555005 |
tgtcataccccaatttttgacctaaggccccactgacacatgtcacttgactctgatcgatctctg |
20555070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 50187783 - 50187836
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactct |
262 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
50187783 |
tgtcataccccaatttttgacctaaggccccactgacacatgtcacttgactct |
50187836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 262
Target Start/End: Complemental strand, 3382511 - 3382457
Alignment:
| Q |
208 |
ctgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactct |
262 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||| |||||||| |||||| |
|
|
| T |
3382511 |
ctgtcataccccaatttttgacctaaggccccactgacacatgtcactcgactct |
3382457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 209 - 262
Target Start/End: Complemental strand, 39745486 - 39745433
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactct |
262 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| |||||||| |||||| |
|
|
| T |
39745486 |
tgtcataccccaatttttgacctaaggccccactgacacatgtcactcgactct |
39745433 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 209 - 255
Target Start/End: Complemental strand, 3389258 - 3389212
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcact |
255 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| |||||||| |
|
|
| T |
3389258 |
tgtcataccccaatttttgacctaaggccccactgacacatgtcact |
3389212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 22175903 - 22175853
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgac |
259 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| ||||||||||| |
|
|
| T |
22175903 |
tgtcataccccaatttttgacctaaggccccactgacacgtgtcacttgac |
22175853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 246
Target Start/End: Original strand, 13100669 - 13100707
Alignment:
| Q |
208 |
ctgtcataccccaattgttgacctaaggccccactgaca |
246 |
Q |
| |
|
|||||||||||||| | |||||||||||||||||||||| |
|
|
| T |
13100669 |
ctgtcataccccaaattttgacctaaggccccactgaca |
13100707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 246
Target Start/End: Complemental strand, 15880111 - 15880073
Alignment:
| Q |
208 |
ctgtcataccccaattgttgacctaaggccccactgaca |
246 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
15880111 |
ctgtcataccccaatttttgacctaaggtcccactgaca |
15880073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 55793294 - 55793257
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgaca |
246 |
Q |
| |
|
||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
55793294 |
tgtcataccccaatttttgacctaaggtcccactgaca |
55793257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1922 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold1922
Description:
Target: scaffold1922; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 281 - 216
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| ||||||||| |||||||||||| ||||||||||||||| | ||||||||| |
|
|
| T |
281 |
tgtcataccccaatttttgacctaatgccccactgacacatgtcacttgactctgatcgatctctg |
216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0473 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0473
Description:
Target: scaffold0473; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 9228 - 9163
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| ||||||||||||| |||||||| ||||||||||||||| | ||||||||| |
|
|
| T |
9228 |
tgtcataccccaatttttgacctaaggcctcactgacacatgtcacttgactctgatcgatctctg |
9163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0320 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0320
Description:
Target: scaffold0320; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 6386 - 6321
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| ||| |||||||||||||||||| ||||||||||||||| | ||||||||| |
|
|
| T |
6386 |
tgtcataccccaatttttgtcctaaggccccactgacacatgtcacttgactctgatcgatctctg |
6321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0150 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0150
Description:
Target: scaffold0150; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 38664 - 38599
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| |||||||| |||||| | ||||||||| |
|
|
| T |
38664 |
tgtcataccccaatttttgacctaaggccccactgacacatgtcactcgactctgatcgatctctg |
38599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0085 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0085
Description:
Target: scaffold0085; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 7864 - 7799
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| ||| ||||||||||||||| | ||||||||| |
|
|
| T |
7864 |
tgtcataccccaatttttgacctaaggccccactaacacatgtcacttgactctgatcgatctctg |
7799 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0050 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0050
Description:
Target: scaffold0050; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 27781 - 27716
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| |||||||| |||||| | ||||||||| |
|
|
| T |
27781 |
tgtcataccccaatttttgacctaaggccccactgacacatgtcactcgactctgatcgatctctg |
27716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0028 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0028
Description:
Target: scaffold0028; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 274
Target Start/End: Original strand, 65838 - 65903
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| ||| ||||||||||||||| | ||||||||| |
|
|
| T |
65838 |
tgtcataccccaatttttgacctaaggccccactcacacatgtcacttgactctgatcgatctctg |
65903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0016
Description:
Target: scaffold0016; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 274
Target Start/End: Original strand, 14099 - 14164
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||| ||||| |||||||||||||||||||||| ||||||||||||||| | ||||||||| |
|
|
| T |
14099 |
tgtcatacctcaatttttgacctaaggccccactgacacatgtcacttgactctgatcgatctctg |
14164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0054 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0054
Description:
Target: scaffold0054; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 196
Target Start/End: Complemental strand, 80054 - 79859
Alignment:
| Q |
2 |
gcctttcttagacctttgctactttatccattaagtctttgtcatgggattcttccccttgtagttattgttgtaagcatacttattctactcaaaggca |
101 |
Q |
| |
|
|||||||||||| || | ||| || |||||| ||| |||||||| ||||||| |||||||| || ||| | |||||| |||| || ||||||| | | |
|
|
| T |
80054 |
gcctttcttagatctccggtaccttctccattgagttcttgtcatgtgattctttcccttgtaattgttgctataagcaaacttctttgactcaaatgaa |
79955 |
T |
|
| Q |
102 |
atac-catttttgttgttatccacaatattggtgcttcttttcatcacattgttcttcccatgttacacattcttatgggtcgaccgaacccattt |
196 |
Q |
| |
|
||| |||||||||| |||||||||| ||||||| ||| ||| | ||||||||||||||||| || ||||| || |||||| | |||||||||| |
|
|
| T |
79954 |
gtacacatttttgtttttatccacaacattggtgtttccttttaccacattgttcttcccattttgtacattattttgggtcaattgaacccattt |
79859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0351 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0351
Description:
Target: scaffold0351; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 7706 - 7641
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
|||||||||| |||| |||||||||||||||||||||| |||||||||||||| | ||||||||| |
|
|
| T |
7706 |
tgtcataccctaatttttgacctaaggccccactgacacttgtcacttgactctgatcgatctctg |
7641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0253 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0253
Description:
Target: scaffold0253; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 209 - 274
Target Start/End: Original strand, 10339 - 10404
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| ||||||||||||||| |||||| |||||||| |||||| | ||||||||| |
|
|
| T |
10339 |
tgtcataccccaatttttgacctaaggccccgctgacacatgtcactcgactctgatcgatctctg |
10404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0253; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 209 - 274
Target Start/End: Original strand, 19764 - 19829
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| ||||||||||||||| |||||| |||||||| |||||| | ||||||||| |
|
|
| T |
19764 |
tgtcataccccaatttttgacctaaggccccgctgacacatgtcactcgactctgatcgatctctg |
19829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0046 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0046
Description:
Target: scaffold0046; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 86762 - 86697
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
|||||||||| |||| |||||||||||||||||||||| |||||||| |||||| | ||||||||| |
|
|
| T |
86762 |
tgtcataccctaatttttgacctaaggccccactgacacatgtcactcgactctgatcgatctctg |
86697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0029
Description:
Target: scaffold0029; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 259
Target Start/End: Complemental strand, 38139 - 38088
Alignment:
| Q |
208 |
ctgtcataccccaattgttgacctaaggccccactgacatatgtcacttgac |
259 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||| ||||||||||| |
|
|
| T |
38139 |
ctgtcataccccaatttttgacctaaggccccactgacacgtgtcacttgac |
38088 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0306 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0306
Description:
Target: scaffold0306; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 209 - 271
Target Start/End: Original strand, 15644 - 15706
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatct |
271 |
Q |
| |
|
||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| | |||||| |
|
|
| T |
15644 |
tgtcataccccaatttttgttctaaggccccactgacacatgtcacttgactctgatcgatct |
15706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0328 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0328
Description:
Target: scaffold0328; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 242 - 177
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
||||||||||||||| ||||||||||||| |||||||| ||||||| |||||| | ||||||||| |
|
|
| T |
242 |
tgtcataccccaatttttgacctaaggcctcactgacacttgtcactcgactctgatcgatctctg |
177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0630 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0630
Description:
Target: scaffold0630; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 218 - 274
Target Start/End: Complemental strand, 1434 - 1378
Alignment:
| Q |
218 |
ccaattgttgacctaaggccccactgacatatgtcacttgactctcagcgatctctg |
274 |
Q |
| |
|
|||||| |||||||||||||||||||||| |||||||| |||||| | ||||||||| |
|
|
| T |
1434 |
ccaatttttgacctaaggccccactgacacatgtcactcgactctgatcgatctctg |
1378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0755 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0755
Description:
Target: scaffold0755; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 246
Target Start/End: Original strand, 962 - 1000
Alignment:
| Q |
208 |
ctgtcataccccaattgttgacctaaggccccactgaca |
246 |
Q |
| |
|
|||||||||||||| | |||||||||||||||||||||| |
|
|
| T |
962 |
ctgtcataccccaaattttgacctaaggccccactgaca |
1000 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0505 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0505
Description:
Target: scaffold0505; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 11470 - 11520
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgac |
259 |
Q |
| |
|
||||||||||||||| ||||||||||| |||||| ||| |||||| ||||| |
|
|
| T |
11470 |
tgtcataccccaatttttgacctaaggacccactaacacatgtcatttgac |
11520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0441 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0441
Description:
Target: scaffold0441; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 2471 - 2521
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgacatatgtcacttgac |
259 |
Q |
| |
|
||||||||||||||| ||||||||||| ||||||||| |||||| ||||| |
|
|
| T |
2471 |
tgtcataccccaatttttgacctaaggtcccactgacgcatgtcatttgac |
2521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0378 (Bit Score: 31; Significance: 0.00000002; HSPs: 3)
Name: scaffold0378
Description:
Target: scaffold0378; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 246
Target Start/End: Original strand, 769 - 807
Alignment:
| Q |
208 |
ctgtcataccccaattgttgacctaaggccccactgaca |
246 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
769 |
ctgtcataccccaatttttgacctaaggtcccactgaca |
807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0378; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 3336 - 3373
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgaca |
246 |
Q |
| |
|
||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
3336 |
tgtcataccccaatttttgacctaaggtcccactgaca |
3373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0378; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 15816 - 15853
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgaca |
246 |
Q |
| |
|
||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
15816 |
tgtcataccccaatttttgacctaaggtcccactgaca |
15853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0094 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0094
Description:
Target: scaffold0094; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 246
Target Start/End: Complemental strand, 30766 - 30728
Alignment:
| Q |
208 |
ctgtcataccccaattgttgacctaaggccccactgaca |
246 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
30766 |
ctgtcataccccaatttttgacctaaggtcccactgaca |
30728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0068 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0068
Description:
Target: scaffold0068; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 246
Target Start/End: Complemental strand, 17839 - 17801
Alignment:
| Q |
208 |
ctgtcataccccaattgttgacctaaggccccactgaca |
246 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
17839 |
ctgtcataccccaatttttgacctaaggtcccactgaca |
17801 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0068; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 25757 - 25720
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgaca |
246 |
Q |
| |
|
||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
25757 |
tgtcataccccaatttttgacctaaggtcccactgaca |
25720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0101 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0101
Description:
Target: scaffold0101; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 16603 - 16566
Alignment:
| Q |
209 |
tgtcataccccaattgttgacctaaggccccactgaca |
246 |
Q |
| |
|
||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
16603 |
tgtcataccccaatttttgacctaaggtcccactgaca |
16566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0104 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0104
Description:
Target: scaffold0104; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 246
Target Start/End: Complemental strand, 38607 - 38567
Alignment:
| Q |
206 |
tgctgtcataccccaattgttgacctaaggccccactgaca |
246 |
Q |
| |
|
||||||||||||| |||| ||||||||||| |||||||||| |
|
|
| T |
38607 |
tgctgtcatacccgaatttttgacctaaggtcccactgaca |
38567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0098 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0098
Description:
Target: scaffold0098; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 26996 - 27028
Alignment:
| Q |
202 |
tgggtgctgtcataccccaattgttgacctaag |
234 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| |
|
|
| T |
26996 |
tgggtgctgtcataccccaatttttgacctaag |
27028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0014
Description:
Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 252
Target Start/End: Original strand, 3765 - 3809
Alignment:
| Q |
208 |
ctgtcataccccaattgttgacctaaggccccactgacatatgtc |
252 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||| |||| |||| |
|
|
| T |
3765 |
ctgtcataccccaatttttgacctaagggcccactaacatgtgtc |
3809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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