View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20785_high_7 (Length: 333)

Name: NF20785_high_7
Description: NF20785
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20785_high_7
NF20785_high_7
[»] chr7 (1 HSPs)
chr7 (19-314)||(37032685-37032979)


Alignment Details
Target: chr7 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 19 - 314
Target Start/End: Complemental strand, 37032979 - 37032685
Alignment:
Q  19 cagagagcctaaacaatatcattgatcaaacgcttatgacggttataatgcttttccatgaaaactctagaggcaccttctacagttctacgccatgtct 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37032979 cagagagcctaaacaatatcattgatcaaacgcttatgacggttataatgcttttccatgaaaactctagaggcaccttctacagttctacgccatgtct 37032880  T
Q  119 gcaacaaagtatagtaattaacaaaacaataagaatgtgattcaaaacaattactctcatcgagcgtaattgtatagattaattcgtcgaggtaatttag 218  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||    
T  37032879 gcaacaaagtatagtaattaacaaaacaataagaaagtgattcaaaacaattactctcatcgcacg-aattgtatagattaattcgtcgaggtaatttag 37032781  T
Q  219 atttatttaacggtaagttttatgaaaatgtgtaaaacaaaagactaagaaaaaatgttaattggggtctcaccttgtgaatggttcccaagagtg 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  37032780 atttatttaacggtaagttttatgaaaatgtgtaaaacaaaagactaagaaaaaatgttaattggggtttcaccttgtgaatggttcccaagagtg 37032685  T

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