View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20786_low_4 (Length: 201)

Name: NF20786_low_4
Description: NF20786
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20786_low_4
NF20786_low_4
[»] chr2 (54 HSPs)
chr2 (9-162)||(39664745-39664898)
chr2 (11-156)||(44709744-44709889)
chr2 (12-156)||(16763076-16763220)
chr2 (12-156)||(19908246-19908391)
chr2 (9-161)||(2766929-2767081)
chr2 (9-156)||(40560223-40560370)
chr2 (31-156)||(24208061-24208186)
chr2 (9-153)||(17696209-17696353)
chr2 (9-156)||(14389081-14389228)
chr2 (31-156)||(6786000-6786125)
chr2 (9-152)||(42519202-42519346)
chr2 (9-156)||(37020508-37020655)
chr2 (67-161)||(24205593-24205687)
chr2 (67-156)||(14387349-14387438)
chr2 (67-156)||(16764611-16764700)
chr2 (9-156)||(39455169-39455316)
chr2 (67-156)||(37022185-37022274)
chr2 (9-157)||(6797506-6797654)
chr2 (67-162)||(2577480-2577575)
chr2 (12-107)||(16377197-16377292)
chr2 (67-156)||(40561878-40561967)
chr2 (67-156)||(6783364-6783453)
chr2 (67-156)||(16376736-16376825)
chr2 (32-146)||(11315335-11315449)
chr2 (67-157)||(39663153-39663243)
chr2 (74-153)||(19906685-19906764)
chr2 (50-156)||(19581414-19581520)
chr2 (87-157)||(34400313-34400383)
chr2 (33-142)||(37417287-37417396)
chr2 (9-153)||(37645490-37645634)
chr2 (33-107)||(29909661-29909735)
chr2 (67-162)||(39456780-39456875)
chr2 (19-109)||(17946141-17946231)
chr2 (19-100)||(7744099-7744180)
chr2 (115-156)||(42517558-42517599)
chr2 (33-93)||(39398-39458)
chr2 (34-110)||(26584819-26584895)
chr2 (33-119)||(39593-39679)
chr2 (95-153)||(6799436-6799494)
chr2 (19-73)||(13999890-13999944)
chr2 (37-91)||(15372564-15372618)
chr2 (33-146)||(25619670-25619783)
chr2 (37-110)||(41706585-41706658)
chr2 (26-78)||(62814-62866)
chr2 (19-119)||(11023000-11023100)
chr2 (44-91)||(10716893-10716940)
chr2 (50-100)||(4046352-4046402)
chr2 (20-106)||(15432378-15432464)
chr2 (33-87)||(42879424-42879478)
chr2 (33-110)||(92348-92425)
chr2 (33-146)||(361455-361568)
chr2 (16-81)||(15807903-15807968)
chr2 (16-81)||(32608051-32608116)
chr2 (19-119)||(28246700-28246800)
[»] chr5 (47 HSPs)
chr5 (12-156)||(17574318-17574462)
chr5 (9-157)||(36057590-36057738)
chr5 (9-156)||(2854304-2854450)
chr5 (12-158)||(7267841-7267987)
chr5 (12-156)||(2179787-2179931)
chr5 (9-156)||(24541188-24541336)
chr5 (9-156)||(34327635-34327782)
chr5 (9-156)||(29621758-29621905)
chr5 (31-160)||(42473606-42473735)
chr5 (12-157)||(30468260-30468405)
chr5 (31-153)||(40780553-40780675)
chr5 (9-153)||(18624985-18625129)
chr5 (13-156)||(8539675-8539818)
chr5 (67-156)||(40782211-40782300)
chr5 (67-162)||(7269446-7269541)
chr5 (67-156)||(29620138-29620227)
chr5 (67-156)||(2852886-2852975)
chr5 (67-156)||(21842992-21843081)
chr5 (67-156)||(12738736-12738825)
chr5 (67-156)||(12801559-12801648)
chr5 (67-156)||(30463900-30463989)
chr5 (67-156)||(42471548-42471637)
chr5 (67-159)||(8541271-8541363)
chr5 (67-154)||(17577935-17578022)
chr5 (33-146)||(18728603-18728716)
chr5 (33-110)||(32087560-32087637)
chr5 (33-146)||(35395343-35395456)
chr5 (33-146)||(43318061-43318174)
chr5 (67-156)||(28813765-28813856)
chr5 (44-146)||(38596878-38596980)
chr5 (88-153)||(28822111-28822176)
chr5 (95-156)||(34328855-34328916)
chr5 (65-146)||(43492131-43492212)
chr5 (21-93)||(35292371-35292443)
chr5 (27-146)||(15459184-15459303)
chr5 (37-100)||(27075876-27075939)
chr5 (32-92)||(24496807-24496867)
chr5 (9-52)||(28819391-28819434)
chr5 (67-156)||(32134231-32134320)
chr5 (33-146)||(33256410-33256523)
chr5 (34-106)||(38178095-38178167)
chr5 (34-106)||(38205319-38205391)
chr5 (33-89)||(38597012-38597068)
chr5 (69-153)||(41493847-41493931)
chr5 (33-110)||(19997164-19997241)
chr5 (31-100)||(27349212-27349281)
chr5 (116-156)||(28819348-28819388)
[»] chr3 (75 HSPs)
chr3 (12-156)||(53190759-53190903)
chr3 (12-156)||(27899081-27899225)
chr3 (12-156)||(41977750-41977894)
chr3 (9-156)||(21348723-21348870)
chr3 (12-156)||(2226152-2226296)
chr3 (9-156)||(51684610-51684757)
chr3 (9-162)||(3152215-3152368)
chr3 (19-156)||(54898437-54898574)
chr3 (30-150)||(2660218-2660338)
chr3 (9-157)||(30599915-30600063)
chr3 (9-156)||(44794208-44794354)
chr3 (9-154)||(43765139-43765284)
chr3 (9-156)||(17515310-17515457)
chr3 (9-156)||(23293167-23293314)
chr3 (12-143)||(35905712-35905843)
chr3 (9-153)||(42279510-42279654)
chr3 (12-156)||(46112487-46112631)
chr3 (67-157)||(41979352-41979442)
chr3 (67-156)||(38193510-38193599)
chr3 (67-156)||(46308807-46308896)
chr3 (67-156)||(53094273-53094362)
chr3 (67-156)||(3150252-3150341)
chr3 (67-156)||(54900074-54900163)
chr3 (12-153)||(2377032-2377173)
chr3 (67-156)||(38191895-38191984)
chr3 (67-156)||(44795890-44795979)
chr3 (67-156)||(46310436-46310525)
chr3 (67-156)||(53187742-53187831)
chr3 (67-156)||(46609149-46609238)
chr3 (67-156)||(46611303-46611392)
chr3 (67-162)||(35903819-35903914)
chr3 (67-156)||(28626411-28626500)
chr3 (67-156)||(53092623-53092712)
chr3 (67-151)||(2661908-2661992)
chr3 (9-113)||(19987591-19987695)
chr3 (67-156)||(7883328-7883417)
chr3 (12-78)||(7884873-7884939)
chr3 (67-156)||(611222-611311)
chr3 (67-156)||(23291570-23291659)
chr3 (9-110)||(46197766-46197867)
chr3 (9-102)||(48830803-48830896)
chr3 (9-81)||(44276193-44276265)
chr3 (67-155)||(2378983-2379071)
chr3 (40-146)||(23774162-23774268)
chr3 (32-146)||(23888772-23888886)
chr3 (33-146)||(48633887-48634000)
chr3 (87-156)||(30598337-30598406)
chr3 (87-161)||(44267976-44268050)
chr3 (95-156)||(7884927-7884988)
chr3 (33-146)||(40508912-40509025)
chr3 (33-146)||(45898349-45898462)
chr3 (67-153)||(42282473-42282559)
chr3 (86-156)||(51686413-51686483)
chr3 (33-146)||(2977330-2977443)
chr3 (12-60)||(600805-600853)
chr3 (33-100)||(25535250-25535317)
chr3 (36-106)||(33113184-33113254)
chr3 (75-157)||(48829355-48829437)
chr3 (33-146)||(18430272-18430385)
chr3 (33-98)||(23876979-23877044)
chr3 (33-146)||(31887453-31887566)
chr3 (33-92)||(24382894-24382953)
chr3 (33-91)||(1845849-1845907)
chr3 (67-153)||(54412547-54412633)
chr3 (37-146)||(41021008-41021117)
chr3 (117-156)||(600725-600764)
chr3 (19-78)||(5133074-5133133)
chr3 (87-146)||(17516993-17517052)
chr3 (20-91)||(45257208-45257279)
chr3 (27-78)||(54092764-54092815)
chr3 (67-156)||(46114105-46114195)
chr3 (87-156)||(21350625-21350694)
chr3 (33-106)||(33852671-33852744)
chr3 (33-146)||(51454251-51454364)
chr3 (66-146)||(41944586-41944666)
[»] chr1 (56 HSPs)
chr1 (12-156)||(4855946-4856090)
chr1 (12-156)||(34778118-34778262)
chr1 (9-156)||(46583533-46583680)
chr1 (9-156)||(2869579-2869726)
chr1 (12-156)||(6818658-6818802)
chr1 (12-156)||(25278348-25278492)
chr1 (12-156)||(31238475-31238619)
chr1 (9-153)||(33602621-33602765)
chr1 (12-159)||(37344339-37344486)
chr1 (9-156)||(27087283-27087430)
chr1 (9-156)||(9121645-9121792)
chr1 (31-156)||(47013081-47013206)
chr1 (13-156)||(50556078-50556221)
chr1 (9-156)||(51896129-51896276)
chr1 (9-156)||(3013447-3013600)
chr1 (9-110)||(15104487-15104588)
chr1 (67-156)||(34776569-34776658)
chr1 (67-156)||(8169568-8169657)
chr1 (67-156)||(26223587-26223676)
chr1 (67-156)||(46582010-46582099)
chr1 (69-156)||(8167942-8168029)
chr1 (67-158)||(37345962-37346053)
chr1 (67-156)||(9120039-9120128)
chr1 (67-156)||(25276742-25276831)
chr1 (67-156)||(27089279-27089368)
chr1 (54-163)||(25278975-25279084)
chr1 (67-156)||(47011456-47011545)
chr1 (67-157)||(4854409-4854499)
chr1 (67-156)||(1444181-1444270)
chr1 (9-153)||(52643597-52643736)
chr1 (67-156)||(31236819-31236908)
chr1 (67-145)||(33599229-33599307)
chr1 (86-156)||(52641888-52641958)
chr1 (87-156)||(2871096-2871165)
chr1 (33-146)||(42134492-42134605)
chr1 (95-156)||(33599187-33599248)
chr1 (87-156)||(37088156-37088225)
chr1 (95-155)||(1442551-1442611)
chr1 (95-155)||(6816866-6816926)
chr1 (95-155)||(50554164-50554224)
chr1 (67-153)||(3011858-3011944)
chr1 (76-156)||(25278854-25278934)
chr1 (33-110)||(36895511-36895588)
chr1 (33-119)||(46638808-46638894)
chr1 (30-100)||(51121961-51122031)
chr1 (67-156)||(23577636-23577725)
chr1 (37-110)||(27940654-27940727)
chr1 (33-110)||(31801679-31801756)
chr1 (96-156)||(45044949-45045009)
chr1 (67-153)||(51894570-51894656)
chr1 (19-93)||(5783427-5783501)
chr1 (49-106)||(18183960-18184017)
chr1 (33-146)||(35479976-35480089)
chr1 (33-106)||(45380985-45381058)
chr1 (31-78)||(1442599-1442646)
chr1 (37-146)||(47269461-47269570)
[»] chr8 (61 HSPs)
chr8 (9-156)||(13282478-13282625)
chr8 (12-156)||(8609787-8609931)
chr8 (12-156)||(13108336-13108480)
chr8 (9-160)||(27691150-27691301)
chr8 (12-156)||(38547228-38547372)
chr8 (9-156)||(41042581-41042728)
chr8 (9-153)||(26242311-26242455)
chr8 (9-156)||(13486096-13486243)
chr8 (9-153)||(41825641-41825785)
chr8 (9-153)||(42941777-42941921)
chr8 (9-156)||(7745109-7745256)
chr8 (9-163)||(33708801-33708954)
chr8 (67-156)||(601704-601793)
chr8 (9-158)||(22272332-22272483)
chr8 (67-161)||(33762713-33762807)
chr8 (67-156)||(29237151-29237240)
chr8 (67-156)||(29239187-29239276)
chr8 (31-159)||(27406916-27407044)
chr8 (67-156)||(27692837-27692926)
chr8 (67-156)||(38548831-38548920)
chr8 (67-155)||(33707207-33707295)
chr8 (67-164)||(8608229-8608327)
chr8 (67-156)||(13106804-13106893)
chr8 (67-156)||(15308261-15308350)
chr8 (67-156)||(15488630-15488719)
chr8 (67-156)||(33761069-33761158)
chr8 (67-156)||(35509214-35509303)
chr8 (32-155)||(5036446-5036569)
chr8 (31-138)||(15305815-15305922)
chr8 (31-138)||(15486184-15486291)
chr8 (9-143)||(9673162-9673296)
chr8 (67-156)||(35510819-35510908)
chr8 (67-153)||(13283995-13284081)
chr8 (67-156)||(42943426-42943515)
chr8 (67-153)||(27404213-27404299)
chr8 (75-157)||(34681074-34681156)
chr8 (75-156)||(26238726-26238807)
chr8 (9-92)||(40339677-40339760)
chr8 (19-93)||(9184446-9184520)
chr8 (67-156)||(22273891-22273980)
chr8 (33-146)||(31821428-31821541)
chr8 (75-156)||(41823890-41823971)
chr8 (97-157)||(600759-600819)
chr8 (33-146)||(42897775-42897888)
chr8 (88-156)||(13484545-13484613)
chr8 (33-93)||(37526024-37526084)
chr8 (33-120)||(33750385-33750472)
chr8 (67-156)||(5038062-5038150)
chr8 (33-146)||(32822371-32822484)
chr8 (75-156)||(43262145-43262226)
chr8 (30-146)||(28433714-28433830)
chr8 (39-146)||(33160155-33160262)
chr8 (37-119)||(31201148-31201230)
chr8 (33-146)||(462371-462484)
chr8 (33-110)||(11788367-11788444)
chr8 (19-110)||(40020622-40020713)
chr8 (95-156)||(41040720-41040781)
chr8 (33-91)||(1320682-1320740)
chr8 (32-81)||(37801541-37801590)
chr8 (33-146)||(38882798-38882911)
chr8 (33-73)||(8654582-8654622)
[»] chr6 (40 HSPs)
chr6 (9-156)||(13613559-13613706)
chr6 (9-153)||(7372935-7373079)
chr6 (12-156)||(32439071-32439215)
chr6 (9-155)||(20523367-20523513)
chr6 (31-157)||(32455890-32456016)
chr6 (12-156)||(32516877-32517021)
chr6 (31-138)||(3456766-3456873)
chr6 (9-152)||(10568403-10568546)
chr6 (12-155)||(11355223-11355366)
chr6 (9-156)||(6899485-6899632)
chr6 (67-156)||(32518497-32518586)
chr6 (67-156)||(3480657-3480746)
chr6 (67-156)||(32454248-32454337)
chr6 (9-103)||(9398713-9398807)
chr6 (9-85)||(7049828-7049904)
chr6 (9-141)||(14338452-14338584)
chr6 (67-156)||(18645104-18645192)
chr6 (75-156)||(13610690-13610771)
chr6 (67-156)||(9400035-9400124)
chr6 (88-156)||(32437140-32437208)
chr6 (67-162)||(11357194-11357289)
chr6 (33-119)||(3018433-3018519)
chr6 (87-156)||(7371175-7371244)
chr6 (75-156)||(10569927-10570008)
chr6 (95-156)||(8605353-8605414)
chr6 (90-168)||(6902920-6902996)
chr6 (95-165)||(20525362-20525432)
chr6 (37-110)||(2968185-2968258)
chr6 (19-119)||(17952029-17952129)
chr6 (30-146)||(35175861-35175977)
chr6 (37-119)||(4641392-4641474)
chr6 (19-81)||(30891199-30891261)
chr6 (95-152)||(7049790-7049847)
chr6 (20-77)||(25172097-25172154)
chr6 (37-146)||(29077338-29077447)
chr6 (118-153)||(21091109-21091144)
chr6 (75-153)||(21068628-21068706)
chr6 (37-107)||(29112349-29112419)
chr6 (85-162)||(7051263-7051340)
chr6 (16-81)||(11163875-11163940)
[»] chr4 (55 HSPs)
chr4 (9-157)||(43519423-43519571)
chr4 (9-153)||(41761723-41761867)
chr4 (9-155)||(49523125-49523271)
chr4 (9-165)||(41781530-41781686)
chr4 (12-156)||(51011926-51012070)
chr4 (67-157)||(4173740-4173830)
chr4 (67-156)||(43507167-43507256)
chr4 (67-156)||(43508653-43508742)
chr4 (12-156)||(35404425-35404569)
chr4 (9-157)||(48813786-48813934)
chr4 (67-156)||(319273-319362)
chr4 (67-156)||(5437811-5437900)
chr4 (67-157)||(33266010-33266100)
chr4 (67-156)||(833223-833312)
chr4 (67-156)||(5439647-5439736)
chr4 (67-156)||(33264382-33264471)
chr4 (67-156)||(51013886-51013975)
chr4 (9-137)||(48646724-48646852)
chr4 (70-156)||(320903-320989)
chr4 (9-107)||(42980684-42980782)
chr4 (67-156)||(4169686-4169775)
chr4 (37-156)||(835012-835131)
chr4 (67-156)||(35401749-35401838)
chr4 (9-153)||(11601674-11601817)
chr4 (67-156)||(49524733-49524822)
chr4 (12-137)||(52868129-52868254)
chr4 (9-153)||(2693230-2693373)
chr4 (67-146)||(39345574-39345653)
chr4 (67-151)||(43521109-43521193)
chr4 (67-156)||(20493827-20493916)
chr4 (33-146)||(44558494-44558607)
chr4 (75-156)||(48645255-48645336)
chr4 (27-110)||(13450975-13451058)
chr4 (33-110)||(35996109-35996186)
chr4 (37-110)||(44794765-44794838)
chr4 (19-119)||(39083676-39083776)
chr4 (33-92)||(2827468-2827527)
chr4 (87-162)||(11254113-11254188)
chr4 (37-146)||(10372711-10372820)
chr4 (37-110)||(47941857-47941930)
chr4 (19-119)||(5484577-5484677)
chr4 (19-119)||(39921531-39921631)
chr4 (19-119)||(43779854-43779954)
chr4 (37-146)||(10762591-10762700)
chr4 (44-93)||(27624869-27624918)
chr4 (30-119)||(39189419-39189508)
chr4 (66-162)||(2691368-2691463)
chr4 (19-119)||(32652136-32652236)
chr4 (19-119)||(44994274-44994374)
chr4 (19-78)||(44972489-44972548)
chr4 (19-78)||(50131240-50131299)
chr4 (33-107)||(2350508-2350582)
chr4 (66-155)||(20819986-20820075)
chr4 (87-156)||(42982472-42982541)
chr4 (33-146)||(51041932-51042044)
[»] scaffold0058 (3 HSPs)
scaffold0058 (9-156)||(3294-3441)
scaffold0058 (9-156)||(4466-4613)
scaffold0058 (67-156)||(14343-14432)
[»] chr7 (66 HSPs)
chr7 (12-156)||(39859209-39859353)
chr7 (9-156)||(56330-56477)
chr7 (9-156)||(27666042-27666189)
chr7 (9-163)||(24228386-24228540)
chr7 (12-162)||(29996494-29996644)
chr7 (12-157)||(6602334-6602479)
chr7 (9-156)||(20478042-20478189)
chr7 (9-156)||(37115503-37115650)
chr7 (9-156)||(38474120-38474267)
chr7 (9-157)||(30940402-30940550)
chr7 (12-153)||(34776895-34777036)
chr7 (12-157)||(45359335-45359480)
chr7 (9-156)||(47386186-47386333)
chr7 (67-156)||(20479719-20479808)
chr7 (67-156)||(35401969-35402058)
chr7 (67-156)||(35403619-35403708)
chr7 (12-134)||(13168142-13168267)
chr7 (21-153)||(37796170-37796302)
chr7 (67-157)||(78014-78104)
chr7 (67-153)||(27664433-27664519)
chr7 (67-156)||(13169683-13169772)
chr7 (9-110)||(35693347-35693450)
chr7 (67-156)||(47384294-47384383)
chr7 (96-155)||(29994907-29994966)
chr7 (67-153)||(39857648-39857734)
chr7 (33-146)||(33038798-33038911)
chr7 (9-100)||(48852324-48852415)
chr7 (67-161)||(37113936-37114030)
chr7 (12-85)||(23906241-23906314)
chr7 (33-146)||(46996703-46996816)
chr7 (87-155)||(24226582-24226650)
chr7 (67-157)||(23904582-23904672)
chr7 (21-106)||(2167529-2167614)
chr7 (85-157)||(38549546-38549618)
chr7 (67-153)||(6605397-6605483)
chr7 (33-153)||(13018036-13018158)
chr7 (33-107)||(366747-366821)
chr7 (95-157)||(23906295-23906357)
chr7 (20-146)||(27955380-27955506)
chr7 (67-153)||(48227941-48228027)
chr7 (67-156)||(22155847-22155936)
chr7 (67-156)||(22211762-22211851)
chr7 (33-146)||(23953815-23953928)
chr7 (87-156)||(46437107-46437176)
chr7 (19-119)||(45463707-45463807)
chr7 (50-100)||(7401949-7401999)
chr7 (19-100)||(1546343-1546424)
chr7 (37-110)||(35344295-35344368)
chr7 (87-152)||(35691431-35691496)
chr7 (33-146)||(47341687-47341800)
chr7 (33-92)||(19712264-19712323)
chr7 (37-107)||(8423286-8423356)
chr7 (66-147)||(13039641-13039722)
chr7 (67-156)||(34774998-34775087)
chr7 (49-146)||(38613498-38613595)
chr7 (32-93)||(40784409-40784470)
chr7 (95-156)||(45361304-45361365)
chr7 (33-146)||(46812583-46812696)
chr7 (19-78)||(6056844-6056903)
chr7 (125-156)||(35693434-35693465)
chr7 (19-93)||(4322559-4322633)
chr7 (36-106)||(38614916-38614985)
chr7 (12-109)||(11682828-11682925)
chr7 (9-46)||(46439507-46439544)
chr7 (30-91)||(48303647-48303708)
chr7 (34-78)||(31915040-31915084)
[»] scaffold1454 (1 HSPs)
scaffold1454 (12-153)||(1266-1407)
[»] scaffold1712 (1 HSPs)
scaffold1712 (67-156)||(982-1071)
[»] scaffold0081 (1 HSPs)
scaffold0081 (67-156)||(54258-54347)
[»] scaffold0564 (1 HSPs)
scaffold0564 (12-154)||(8264-8404)
[»] scaffold0345 (1 HSPs)
scaffold0345 (67-162)||(1555-1650)
[»] scaffold0024 (1 HSPs)
scaffold0024 (11-85)||(37275-37349)
[»] scaffold0477 (1 HSPs)
scaffold0477 (37-119)||(6639-6721)
[»] scaffold0092 (1 HSPs)
scaffold0092 (16-81)||(36834-36899)
[»] scaffold0002 (1 HSPs)
scaffold0002 (85-149)||(436272-436336)


Alignment Details
Target: chr2 (Bit Score: 118; Significance: 2e-60; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 9 - 162
Target Start/End: Original strand, 39664745 - 39664898
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||| ||||||    
T  39664745 acatcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgtaaaattcggggacg 39664844  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtccttttt 162  Q
    || || |||||||||| ||||||||||||||||||||||||||||||| |||||    
T  39664845 aatttggccgattttttaaaattcaaggacgaatttgaggtattagtcattttt 39664898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 11 - 156
Target Start/End: Original strand, 44709744 - 44709889
Alignment:
Q  11 atcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 110  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||| ||||||||||| ||||    
T  44709744 atcatcaccactaacgaagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagttatttcgcaaaattcagggccgaa 44709843  T
Q  111 atttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
     || |||| ||||| |||||||||||||||||||||||||||||||    
T  44709844 tttggccggttttttaaaattcaaggacgaatttgaggtattagtc 44709889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 12 - 156
Target Start/End: Complemental strand, 16763220 - 16763076
Alignment:
Q  12 tcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 111  Q
    ||||| |||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||     
T  16763220 tcatcgccactaacagagattttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaat 16763121  T
Q  112 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||  ||||||||| |||||||||||||||||||||||||||||||    
T  16763120 ttgaccgatttttaaaaattcaaggacgaatttgaggtattagtc 16763076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 156
Target Start/End: Original strand, 19908246 - 19908391
Alignment:
Q  12 tcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 111  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| | ||||||||| ||||||||||||| ||     
T  19908246 tcatcaccactaacggagcttttggacggagggaccattttgacggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggactaat 19908345  T
Q  112 tttgccga-tttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    || ||||| ||||| |||||||||||||||||||||||||||||||    
T  19908346 ttggccgatttttttaaaattcaaggacgaatttgaggtattagtc 19908391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 9 - 161
Target Start/End: Complemental strand, 2767081 - 2766929
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| | ||||||||| |||||||| |||||    
T  2767081 acatcatcaccactaacggagcttttggacagagggaccattttgatagacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacg 2766982  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcctttt 161  Q
    |  ||  ||||||||| |||||||||||||||||||||| |||||||| ||||    
T  2766981 agtttgaccgatttttaaaaattcaaggacgaatttgagctattagtcatttt 2766929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 9 - 156
Target Start/End: Complemental strand, 40560370 - 40560223
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    ||||||||||||||||  || ||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||    
T  40560370 acatcatcaccactaacagaacttttggacggagggactattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacg 40560271  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    || || || ||||||| ||||||||| ||||||||||| |||||||||    
T  40560270 aatttggctgattttttaaaattcaaagacgaatttgaagtattagtc 40560223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 31 - 156
Target Start/End: Original strand, 24208061 - 24208186
Alignment:
Q  31 ttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaat 130  Q
    ||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  24208061 ttttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaataattcagggacgaaattggccgatttttcaaaat 24208160  T
Q  131 tcaaggacgaatttgaggtattagtc 156  Q
    |||||||  | |||||||||||||||    
T  24208161 tcaaggagtattttgaggtattagtc 24208186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 153
Target Start/End: Complemental strand, 17696353 - 17696209
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||| | |||||||   |||||||||||| |    
T  17696353 acatcatcaccactaacggagcttttggacggagtgaccattttgattgacgtttgtaaaattcagggactaaatagatattttccaaaattcagggatg 17696254  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 153  Q
    || || |||||||||| ||||||||||||||||||||||||||||    
T  17696253 aatttggccgatttttgaaaattcaaggacgaatttgaggtatta 17696209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 9 - 156
Target Start/End: Original strand, 14389081 - 14389228
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||| ||||| | | |||||||||||||||||||||||||||||| | || |||||||||||||||| | ||||||||| ||||||||||||||    
T  14389081 acatcatcactactaacgaaacttttggacggagggaccattttgatggacatttggaaaattcagggactaaatagatatttcgcaaaattcagggacg 14389180  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    || || |||||||||| ||||||||| |||||||||||||||||||||    
T  14389181 aatttggccgatttttgaaaattcaatgacgaatttgaggtattagtc 14389228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 31 - 156
Target Start/End: Original strand, 6786000 - 6786125
Alignment:
Q  31 ttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaat 130  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||| ||||||||||||||||    
T  6786000 ttttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcaaataattaagggacgaaattggccgatttttcaaaat 6786099  T
Q  131 tcaaggacgaatttgaggtattagtc 156  Q
    |||||||| | |||||||||||||||    
T  6786100 tcaaggactattttgaggtattagtc 6786125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 152
Target Start/End: Original strand, 42519202 - 42519346
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcg-aaaaattcagggac 107  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||| | ||||||||| ||||    
T  42519202 acatcatcaccactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaaattcaaggac 42519301  T
Q  108 gaaatttgccgatttttcaaaattcaaggacgaatttgaggtatt 152  Q
     || ||   | |||||| |||||||||||||||||||||||||||    
T  42519302 taatttgatcaattttttaaaattcaaggacgaatttgaggtatt 42519346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 9 - 156
Target Start/End: Complemental strand, 37020655 - 37020508
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||| | ||| |||  ||||||||||||||||   ||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||     
T  37020655 acatcatcactattaacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcaaaaaattcaaggaca 37020556  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    |||||  ||||||||||||||||||||||| | |||||||||||||||    
T  37020555 aaattgaccgatttttcaaaattcaaggactattttgaggtattagtc 37020508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 67 - 161
Target Start/End: Complemental strand, 24205687 - 24205593
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcctttt 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||    
T  24205687 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtcctttt 24205593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 14387438 - 14387349
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  14387438 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 14387349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 16764611 - 16764700
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  16764611 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttctcaaaattcaaggacgaatttgaggtattagtc 16764700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 9 - 156
Target Start/End: Complemental strand, 39455316 - 39455169
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||| ||||||| |||||||||| |||||| |||||||||||||||||||||||||||||| ||||||| | ||||||| | ||||||||||   |    
T  39455316 acatcatcgccactaacggagcttttgaacggagagaccattttgatggacgtctgtaaaattcatggactaaatagatattttgcaaaattcaggactg 39455217  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    || ||  ||||||||| ||||||||||||| |||||||| ||||||||    
T  39455216 aatttaaccgattttttaaaattcaaggacaaatttgagatattagtc 39455169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 37022185 - 37022274
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| | |||||||||||||||    
T  37022185 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattggtcgatttttcaaaattcaaggactattttgaggtattagtc 37022274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 9 - 157
Target Start/End: Complemental strand, 6797654 - 6797506
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||||  |||  ||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||| | ||||||||| |||||||||| |||    
T  6797654 acatcatcacccgtaacagagcttttggacggaggaaccattttgatagacgtctgtaaaattaagggactaaatagatatttcgcaaaattcaggaacg 6797555  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 157  Q
    || || ||| |||||| |||||||||  | |||||| ||||||||||||    
T  6797554 aatttagccaattttttaaaattcaaatatgaatttaaggtattagtcc 6797506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 67 - 162
Target Start/End: Original strand, 2577480 - 2577575
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtccttttt 162  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||| | ||||||||||||||| |||||    
T  2577480 aaattcagggactaatttgatatttcaaaaaattcagggacgaaattggacgatttttcaaaattcaaggactattttgaggtattagtcattttt 2577575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 12 - 107
Target Start/End: Original strand, 16377197 - 16377292
Alignment:
Q  12 tcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggac 107  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| | ||||||| | |||||||||||||    
T  16377197 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtatgtaaaattcaaggactaaatagatattttgcaaaattcagggac 16377292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 40561878 - 40561967
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||||||| ||||||  ||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  40561878 aaattcagggactaatttgctatttcacaaaattcagagacgaaattggccgatttttcaaaattcaaagacgaatttgaggtattagtc 40561967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 6783453 - 6783364
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||  ||||||||| ||||||||||||| | |||||||||||||||    
T  6783453 aaattcagggactaatttgatattttgaataattcagggacgaaattgaccgattttttaaaattcaaggactattttgaggtattagtc 6783364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 16376825 - 16376736
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||| | | ||||||| |||||||||||||||| ||  ||||||||| ||||||||| |||||||||||||||||||||    
T  16376825 aaattcagggactaaatagctatttcgtaaaattcagggacgaatttgaccgattttttaaaattcaaagacgaatttgaggtattagtc 16376736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 32 - 146
Target Start/End: Original strand, 11315335 - 11315449
Alignment:
Q  32 tttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaatt 131  Q
    |||||||||||||||||||||||||||||||||  ||||||||| |||| ||||||||||||  |||||  || ||||| || |||||||  | ||||||    
T  11315335 tttggacggagggaccattttgatggacgtctgacaaattcaggaactattttgatatttcgttaaattagggaacgaatttggccgattcataaaaatt 11315434  T
Q  132 caaggacgaatttga 146  Q
     ||||||||| ||||    
T  11315435 taaggacgaagttga 11315449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 67 - 157
Target Start/End: Complemental strand, 39663243 - 39663153
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 157  Q
    ||||||||||||||| | | ||||| | |||||||||||||||| ||  ||||||||| ||||||||||||||||||| ||||||||||||    
T  39663243 aaattcagggactaaatagctattttgcaaaattcagggacgaatttgaccgatttttaaaaattcaaggacgaattttaggtattagtcc 39663153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 74 - 153
Target Start/End: Complemental strand, 19906764 - 19906685
Alignment:
Q  74 gggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 153  Q
    |||||||| | ||||||||| |||||||||||||||| ||  ||||||||| ||||||||||||||||||| ||||||||    
T  19906764 gggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttaaggtatta 19906685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 50 - 156
Target Start/End: Complemental strand, 19581520 - 19581414
Alignment:
Q  50 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggt 149  Q
    |||||||||| | ||  ||||||  ||||||| | ||||||||| ||||||||||||| || || || ||||||| |||||| |||||||||||||||||    
T  19581520 tttgatggacatttggtaaattcgaggactaaatagatatttcgcaaaattcagggacaaatttggctgatttttaaaaatttaaggacgaatttgaggt 19581421  T
Q  150 attagtc 156  Q
    |||||||    
T  19581420 attagtc 19581414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 87 - 157
Target Start/End: Complemental strand, 34400383 - 34400313
Alignment:
Q  87 tatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 157  Q
    ||||||| |||||||||||| ||| || |||||||||| |||||||||||| |||||||||||||||||||    
T  34400383 tatttcgcaaaattcagggatgaatttggccgatttttgaaaattcaaggatgaatttgaggtattagtcc 34400313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 142
Target Start/End: Complemental strand, 37417396 - 37417287
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattc 132  Q
    ||||||| ||||||| ||||||||||||||||  ||||||||||||||| ||||||||||| | |||| ||||| ||| || |||||    | |||||||    
T  37417396 ttggacgaagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggccgacccatgaaaattc 37417297  T
Q  133 aaggacgaat 142  Q
    ||||||||||    
T  37417296 aaggacgaat 37417287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 9 - 153
Target Start/End: Complemental strand, 37645634 - 37645490
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    ||||||||| || |||  |||||| ||||||||||||| ||||||||  || |||| |||||||| ||||||| | ||||||||  |||||| | |||||    
T  37645634 acatcatcatcaataacagagcttatggacggagggacaattttgataaacatctgcaaaattcaaggactaaatagatatttcctaaaatttaaggacg 37645535  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 153  Q
    || |   | ||||||| |||||||||||||||| ||| |||||||    
T  37645534 aattcgactgatttttaaaaattcaaggacgaagttggggtatta 37645490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 29909661 - 29909735
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggac 107  Q
    ||||||||||||||| ||||||||||||||||  ||||| ||||||||| ||||||||||| | |||| ||||||    
T  29909661 ttggacggagggacctttttgatggacgtctgacaaattaagggactaaattgatatttcgcataattgagggac 29909735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 67 - 162
Target Start/End: Original strand, 39456780 - 39456875
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtccttttt 162  Q
    ||||||||||||||| | | ||||| | |||||||| ||||||| ||  || |||||| |||||||||||| |||||||| ||||||||| |||||    
T  39456780 aaattcagggactaaatagctattttgcaaaattcatggacgaatttaaccaattttttaaaattcaaggatgaatttgaagtattagtcgttttt 39456875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 17946231 - 17946141
Alignment:
Q  19 cactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacga 109  Q
    |||||| ||| |||||||||||||||||||||||||||||| |  |  |||||||||||| || ||||||||| | |||||| | ||||||    
T  17946231 cactaacggaccttttggacggagggaccattttgatggacatgagagaaattcagggacaaaattgatattttgcaaaatttaaggacga 17946141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 7744180 - 7744099
Alignment:
Q  19 cactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaatt 100  Q
    |||||| ||| |||||||| ||||||||||||||||||||| |  |  |||||||||||| || ||||||||||| ||||||    
T  7744180 cactaacggaccttttggatggagggaccattttgatggacatgagagaaattcagggacgaaattgatatttcgcaaaatt 7744099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 115 - 156
Target Start/End: Complemental strand, 42517599 - 42517558
Alignment:
Q  115 gccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  42517599 gccgatttttaaaaattcaaggacgaatttgaggtattagtc 42517558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 39398 - 39458
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcg 93  Q
    |||||||| |||||| |||||||| |||||||  ||||||||||||||| |||||||||||    
T  39398 ttggacggggggacctttttgatgaacgtctgacaaattcagggactaagttgatatttcg 39458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 26584819 - 26584895
Alignment:
Q  34 tggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 110  Q
    ||||||||||||  | |||||||||||||| | ||||| ||||| ||||||||||||| ||||| || |||||||||    
T  26584819 tggacggagggatgaatttgatggacgtctattaaattgagggattaatttgatattttgaaaacttgagggacgaa 26584895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 33 - 119
Target Start/End: Complemental strand, 39679 - 39593
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 119  Q
    ||||||||||||||| |||| || |||| |||  ||||||||||| ||| ||||||||||| | |||| ||||||||| || |||||    
T  39679 ttggacggagggacctttttaatcgacgcctgataaattcagggattaaattgatatttcgcataattgagggacgaatttggccga 39593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 95 - 153
Target Start/End: Original strand, 6799436 - 6799494
Alignment:
Q  95 aaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 153  Q
    |||||||| ||||||| ||  ||||||||| |||||||||||||||||||||| |||||    
T  6799436 aaaattcatggacgaatttgtccgatttttaaaaattcaaggacgaatttgagatatta 6799494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 13999944 - 13999890
Alignment:
Q  19 cactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattca 73  Q
    |||||||||||| |||||||||| |||| |||||||||||||| ||| |||||||    
T  13999944 cactaatggagcatttggacggaaggactattttgatggacgtttgttaaattca 13999890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 37 - 91
Target Start/End: Complemental strand, 15372618 - 15372564
Alignment:
Q  37 acggagggaccattttgatggacgtctgtaaaattcagggactaatttgatattt 91  Q
    ||||||||||| ||||||||||||||||  ||||||||||| ||| |||||||||    
T  15372618 acggagggacctttttgatggacgtctgataaattcagggattaaattgatattt 15372564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 25619783 - 25619670
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattc 132  Q
    ||||| ||||||||| ||||||||||| | ||  ||||||||||||||| ||||||||| | | |||| ||||| ||| ||  ||||    | |||||||    
T  25619783 ttggatggagggacctttttgatggacatatgacaaattcagggactaagttgatattttgcataattgagggatgaatttgaccgacccataaaaattc 25619684  T
Q  133 aaggacgaatttga 146  Q
    ||||||||||||||    
T  25619683 aaggacgaatttga 25619670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 110
Target Start/End: Complemental strand, 41706658 - 41706585
Alignment:
Q  37 acggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 110  Q
    ||||||||||| |||||||||||||  |  ||||||||||| ||| ||||||||||| | |||| |||||||||    
T  41706658 acggagggacctttttgatggacgttcgataaattcagggattaaattgatatttcgcataattgagggacgaa 41706585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 62814 - 62866
Alignment:
Q  26 ggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggac 78  Q
    ||||| |||||||||| |||| |||||||||||||| ||| ||||||||||||    
T  62814 ggagcatttggacggaaggactattttgatggacgtttgttaaattcagggac 62866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 11023000 - 11023100
Alignment:
Q  19 cactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccg 118  Q
    |||||| ||| |||||||||||||||||    ||||||||||||    |||||||||||||| ||||||||||||  |||||  |||||||| || ||||    
T  11023000 cactaacggaccttttggacggagggacggaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaattgggggacgaatttggccg 11023099  T
Q  119 a 119  Q
    |    
T  11023100 a 11023100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 44 - 91
Target Start/End: Original strand, 10716893 - 10716940
Alignment:
Q  44 gaccattttgatggacgtctgtaaaattcagggactaatttgatattt 91  Q
    ||||||||||||||||||||| |||||| | |||||| ||||||||||    
T  10716893 gaccattttgatggacgtctgaaaaatttaaggactattttgatattt 10716940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 4046402 - 4046352
Alignment:
Q  50 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaatt 100  Q
    ||||||||||| |||| ||||| || ||||||||||||||||| |||||||    
T  4046402 tttgatggacgactgttaaatttagagactaatttgatatttcaaaaaatt 4046352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 15432464 - 15432378
Alignment:
Q  20 actaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcaggga 106  Q
    |||||| ||||  ||||||| | | ||| ||||||||||||||||  |||||||| |||||| ||||||||||| | |||| |||||    
T  15432464 actaatagagcacttggacgaatgaacctttttgatggacgtctgacaaattcagagactaaattgatatttcgcataattgaggga 15432378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 87
Target Start/End: Complemental strand, 42879478 - 42879424
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgat 87  Q
    ||||||||||||||| ||||||||||||||||  |||||||  |||||| |||||    
T  42879478 ttggacggagggacctttttgatggacgtctgacaaattcatagactaagttgat 42879424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 110
Target Start/End: Original strand, 92348 - 92425
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 110  Q
    |||||| |||||||| |||||||| |||||||  |||||||  |||||| ||||||||||| | |||| ||| |||||    
T  92348 ttggactgagggacctttttgatgaacgtctgacaaattcaaagactaagttgatatttcgcataattgaggtacgaa 92425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 361568 - 361455
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattc 132  Q
    |||||| ||||||| |  ||||||||||||||   ||||||  |||||||||||||||||  | |||| ||||| ||  || |||||||  | |||||||    
T  361568 ttggacagagggactaaattgatggacgtctgacgaattcaatgactaatttgatatttcacataattgagggatgattttggccgattcatgaaaattc 361469  T
Q  133 aaggacgaatttga 146  Q
    ||||||||| ||||    
T  361468 aaggacgaagttga 361455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 15807903 - 15807968
Alignment:
Q  16 caccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaa 81  Q
    ||||||||| || || |||||||||| |||| | |||||| ||||| ||| |||||||||||||||    
T  15807903 caccactaacggtgcatttggacggaaggactaatttgattgacgtttgttaaattcagggactaa 15807968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 32608051 - 32608116
Alignment:
Q  16 caccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaa 81  Q
    ||||||||| || || |||||||||| |||| | |||||| ||||| ||| |||||||||||||||    
T  32608051 caccactaacggtgcatttggacggaaggactaatttgattgacgtttgttaaattcagggactaa 32608116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 28246800 - 28246700
Alignment:
Q  19 cactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccg 118  Q
    |||||| ||| ||||||||| ||||||| |  ||||||||||||    ||||||||| |||| ||||||||||||  |||||  |||||||| || ||||    
T  28246800 cactaacggaccttttggacagagggacgaaattgatggacgtcaaacaaattcaggaactattttgatatttcgttaaatttggggacgaatttggccg 28246701  T
Q  119 a 119  Q
    |    
T  28246700 a 28246700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 117; Significance: 8e-60; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 12 - 156
Target Start/End: Complemental strand, 17574462 - 17574318
Alignment:
Q  12 tcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 111  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||     
T  17574462 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaat 17574363  T
Q  112 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    || |||||||||| |||||||||||||||||||||||||||||||    
T  17574362 ttggccgattttttaaaattcaaggacgaatttgaggtattagtc 17574318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 9 - 157
Target Start/End: Original strand, 36057590 - 36057738
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||| ||||||||||||||    
T  36057590 acatcatcaccattaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggtctaaatagatatttcgcaaaattcagggacg 36057689  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 157  Q
    || || |||||||||| ||||||||||||||||||||||||||||||||    
T  36057690 aatttggccgatttttgaaaattcaaggacgaatttgaggtattagtcc 36057738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 9 - 156
Target Start/End: Original strand, 2854304 - 2854450
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||| | ||||||| ||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  2854304 acatcatcactattaatggaccttttggacggagggacgaatttgttggacgtctgtaaaattcagggactaatttgat-tttcgaaaaattcagggacg 2854402  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    |||||  |||||||||||||||||||||||||||||||||||||||||    
T  2854403 aaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 2854450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 12 - 158
Target Start/End: Complemental strand, 7267987 - 7267841
Alignment:
Q  12 tcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 111  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||| ||||||     
T  7267987 tcatcaccactaacggagcttttggacggagggatcattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagtgacgaat 7267888  T
Q  112 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtcct 158  Q
    || | |||||||| |||||||||||||||||||||||||||||||||    
T  7267887 ttggacgattttttaaaattcaaggacgaatttgaggtattagtcct 7267841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 12 - 156
Target Start/End: Complemental strand, 2179931 - 2179787
Alignment:
Q  12 tcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| | ||||||||  ||||||||||||||||     
T  2179931 tcatcaccactaatggagcttttggacggagggaccattttgatggatgtctgtaaaattcagggattaaatagatatttcacaaaattcagggacgaat 2179832  T
Q  112 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||  ||||||||| ||||||||||||| |||||||||||||||||    
T  2179831 ttgaccgattttttaaaattcaaggacaaatttgaggtattagtc 2179787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 9 - 156
Target Start/End: Original strand, 24541188 - 24541336
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagg-gaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggac 107  Q
    |||||||||| | |||| || |||||||||||||| ||  | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  24541188 acatcatcactattaatagaccttttggacggaggagatgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggac 24541287  T
Q  108 gaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||    
T  24541288 gaaattggccgatttttcaaaattcaatgacgaatttgaggtattagtc 24541336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 9 - 156
Target Start/End: Complemental strand, 34327782 - 34327635
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    ||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||| ||||    
T  34327782 acatcatcaccactaacagagcttttggacggagagaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagcgacg 34327683  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    || || ||| |||||  |||||||||||||||||||||||||||||||    
T  34327682 aatttggccaattttagaaaattcaaggacgaatttgaggtattagtc 34327635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 9 - 156
Target Start/End: Original strand, 29621758 - 29621905
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||| | ||| |||  ||||||||||||||||   ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  29621758 acatcatcactattaacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcagggacg 29621857  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||| |||||||||||||||||||| ||| | |||||||||||||||    
T  29621858 aaattggccgatttttcaaaattcaatgactattttgaggtattagtc 29621905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 31 - 160
Target Start/End: Original strand, 42473606 - 42473735
Alignment:
Q  31 ttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaat 130  Q
    ||||||||||| ||||   ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  42473606 ttttggacggaaggactgatttgatggacgtctgtaaaattcagggactattttgatatttcgaataattcagggacgaaattggccgatttttcaaaat 42473705  T
Q  131 tcaaggacgaatttgaggtattagtccttt 160  Q
    |||||||| | |||||||||||||||||||    
T  42473706 tcaaggactattttgaggtattagtccttt 42473735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 30468260 - 30468405
Alignment:
Q  12 tcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 111  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||| |||||| || ||||||     
T  30468260 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattgagagacgaat 30468359  T
Q  112 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 157  Q
    ||  || |||||| |||||||||||||||| ||||||||| |||||    
T  30468360 ttgaccaattttttaaaattcaaggacgaaattgaggtatcagtcc 30468405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 87; E-Value: 6e-42
Query Start/End: Original strand, 31 - 153
Target Start/End: Complemental strand, 40780675 - 40780553
Alignment:
Q  31 ttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaat 130  Q
    ||||||||||||||||   |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  40780675 ttttggacggagggactgatttgatggacgtttgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaaattgtccgatttttcaaaat 40780576  T
Q  131 tcaaggacgaatttgaggtatta 153  Q
    |||||||| | ||||||||||||    
T  40780575 tcaaggactattttgaggtatta 40780553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 9 - 153
Target Start/End: Original strand, 18624985 - 18625129
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||| ||||| |||||||||||||||| ||||||||||||||||||  ||||||||||||||||||| | ||||||||  ||||||||||||||    
T  18624985 acatcatcactactaacggagcttttggacggaaggaccattttgatggacgagtgtaaaattcagggactaaatagatatttcacaaaattcagggacg 18625084  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 153  Q
    || || || |||   | ||||||||||||||||||||||||||||    
T  18625085 aatttagctgatcagtgaaaattcaaggacgaatttgaggtatta 18625129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 8539818 - 8539675
Alignment:
Q  13 catcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaat 112  Q
    ||||| |||||| |||||||||||| |||| ||| |||||||||||||| ||||||||||||||||||| | ||||||||| |||||||| | ||||| |    
T  8539818 catcaacactaacggagcttttggatggagcgactattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcaagaacgaatt 8539719  T
Q  113 ttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    |    |||||||||||||||||||||||||||||||||||||||    
T  8539718 tgattgatttttcaaaattcaaggacgaatttgaggtattagtc 8539675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 40782211 - 40782300
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  40782211 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 40782300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 67 - 162
Target Start/End: Original strand, 7269446 - 7269541
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtccttttt 162  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||| |||||    
T  7269446 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattagccgattttttaaaattcaaagacgaatttgaggtattagtcattttt 7269541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 29620227 - 29620138
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  29620227 aaattcagagactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 29620138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 2852975 - 2852886
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||    
T  2852975 aaattcaggaactaatttgatatttcgcaaaattcagggacgaaattgaccgattttttaaaattcaaggacgaatttgaggtattagtc 2852886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 21842992 - 21843081
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||||||||||||||| |||||||| |||| |||||  |||||||||||||||||||||||||||||||||||||||||    
T  21842992 aaattcagggactaatttgatatttcgcaaaattcatggacaaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 21843081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 12738736 - 12738825
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||| | ||||||||| |||||||||| ||||| || |||||||||| |||||||||||||||||||||||||||||||    
T  12738736 aaattcagggactaaatagatatttcgcaaaattcaggtacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 12738825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 12801559 - 12801648
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||| | ||||||||| |||||||||| ||||| || |||||||||| |||||||||||||||||||||||||||||||    
T  12801559 aaattcagggactaaatagatatttcgcaaaattcaggtacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 12801648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 30463989 - 30463900
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||| | ||||||||| |||||||||||||||| ||  ||||||||| |||||||||||||||||||||||||||||||    
T  30463989 aaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 30463900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 42471637 - 42471548
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||| | |||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  42471637 aaattcatgtactattttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 42471548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 67 - 159
Target Start/End: Original strand, 8541271 - 8541363
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcctt 159  Q
    ||||||| ||||||| | ||||||||| |||||||||||||||| || |||||||||| ||||||||| ||||||||||||||||||||||||    
T  8541271 aaattcaaggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaatgacgaatttgaggtattagtcctt 8541363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 67 - 154
Target Start/End: Original strand, 17577935 - 17578022
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattag 154  Q
    ||||||| | ||||||||||||||| | |||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||    
T  17577935 aaattcatgaactaatttgatattttgcaaaattcagggaagaaatgggccgatttttcaaaattcaaggacgaatttgaggtattag 17578022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 18728603 - 18728716
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattc 132  Q
    ||||||||||||||| ||||||||||||||||  ||||||||||||||| ||||||||||| | |||| ||||||||| || |||||    | |||||||    
T  18728603 ttggacggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattaagggacgaagttggccgacaagtgaaaattc 18728702  T
Q  133 aaggacgaatttga 146  Q
    | ||||||||||||    
T  18728703 agggacgaatttga 18728716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 33 - 110
Target Start/End: Complemental strand, 32087637 - 32087560
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 110  Q
    ||||||||||||||| |||||||||||||||| |||||| ||||||||| ||||||||||| | |||| |||||||||    
T  32087637 ttggacggagggacctttttgatggacgtctgaaaaattaagggactaagttgatatttcgcataattaagggacgaa 32087560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 35395456 - 35395343
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattc 132  Q
    ||||||||||||||| |||||||||||||||   ||||||||| ||||| ||||||||||| | |||| ||||||||| || |||||  | | |||||||    
T  35395456 ttggacggagggacctttttgatggacgtctaacaaattcaggaactaaattgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattc 35395357  T
Q  133 aaggacgaatttga 146  Q
    | ||| ||||||||    
T  35395356 agggatgaatttga 35395343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 43318061 - 43318174
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattc 132  Q
    ||||||||||||||| |||| |||||||||||  ||||||||||||||| ||||||||||| | |||| ||||| ||  || |||||    | |||||||    
T  43318061 ttggacggagggaccttttttatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgattttggccgacccataaaaattc 43318160  T
Q  133 aaggacgaatttga 146  Q
    ||||||||||||||    
T  43318161 aaggacgaatttga 43318174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 28813765 - 28813856
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga--tttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||| | ||||||||| |||||||| ||||||| || ||| |  |||||  ||||||||||||||||||||||||||||||    
T  28813765 aaattcagggactaaatagatatttcgcaaaattcaaggacgaatttggccaatttttttttaaattcaaggacgaatttgaggtattagtc 28813856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 44 - 146
Target Start/End: Complemental strand, 38596980 - 38596878
Alignment:
Q  44 gaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatt 143  Q
    |||| |||||||||||||||   ||||||||||||||| ||||||||||| | |||| ||||||||| || |||||    | ||||||||||||||||||    
T  38596980 gacctttttgatggacgtctaacaaattcagggactaagttgatatttcgcataattgagggacgaatttggccgacccataaaaattcaaggacgaatt 38596881  T
Q  144 tga 146  Q
    |||    
T  38596880 tga 38596878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 88 - 153
Target Start/End: Original strand, 28822111 - 28822176
Alignment:
Q  88 atttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 153  Q
    |||||| |||||||||||||||| ||  || |||||| ||||||||||||||||||||||||||||    
T  28822111 atttcgcaaaattcagggacgaatttgacctatttttaaaaattcaaggacgaatttgaggtatta 28822176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 95 - 156
Target Start/End: Original strand, 34328855 - 34328916
Alignment:
Q  95 aaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    |||||||| ||||||| ||  ||||||||| |||||||||||||||||||||||||||||||    
T  34328855 aaaattcatggacgaatttgaccgatttttgaaaattcaaggacgaatttgaggtattagtc 34328916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 65 - 146
Target Start/End: Original strand, 43492131 - 43492212
Alignment:
Q  65 taaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 146  Q
    ||||||||||||||||| | ||||||||| |||||||||||| ||| || || ||||||| |||||| ||| ||||||||||    
T  43492131 taaaattcagggactaaatagatatttcgcaaaattcagggatgaacttggctgatttttgaaaatttaagtacgaatttga 43492212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 35292371 - 35292443
Alignment:
Q  21 ctaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcg 93  Q
    |||| ||||| |||||||||||| ||| |||| |||||||||||  ||||||||||||||| |||||||||||    
T  35292371 ctaacggagcatttggacggaggaaccttttttatggacgtctgacaaattcagggactaagttgatatttcg 35292443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 27 - 146
Target Start/End: Original strand, 15459184 - 15459303
Alignment:
Q  27 gagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttca 126  Q
    |||| |||||||| ||||||||||||||||||||||||| ||||||||| || || | |  ||||||| |||||  |||||||  ||  |||||  ||      
T  15459184 gagcatttggacgaagggaccattttgatggacgtctgttaaattcaggaacaaaatagccatttcgataaattgggggacgattttgtccgatccttgc 15459283  T
Q  127 aaattcaaggacgaatttga 146  Q
    ||||||||||||||||||||    
T  15459284 aaattcaaggacgaatttga 15459303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 37 - 100
Target Start/End: Complemental strand, 27075939 - 27075876
Alignment:
Q  37 acggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaatt 100  Q
    |||||||||  | |||||||||||||||| ||||||||| ||||||||||||||| ||||||||    
T  27075939 acggagggatgaatttgatggacgtctgttaaattcaggaactaatttgatattttgaaaaatt 27075876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 24496867 - 24496807
Alignment:
Q  32 tttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttc 92  Q
    |||||||||| |||||||||||||| ||||||   ||||||||||| ||||||||||||||    
T  24496867 tttggacggatggaccattttgatgaacgtctcacaaattcagggattaatttgatatttc 24496807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 28819434 - 28819391
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccatttt 52  Q
    ||||||||| |||||| |||||||||||||||||||||||||||    
T  28819434 acatcatcatcactaacggagcttttggacggagggaccatttt 28819391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 32134320 - 32134231
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||| | |||||||   ||||||||  |||||| || |  ||||||| ||||||||| ||| |||||||||||||||||    
T  32134320 aaattcagggactaaatagatattttacaaaattcaaagacgaatttggttgatttttgaaaattcaatgacaaatttgaggtattagtc 32134231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 33256523 - 33256410
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattc 132  Q
    ||||||||||||||  ||||||||||||||||  |||||||  || ||| ||||||||||| | |||| | ||| ||| || |||||  | | |||||||    
T  33256523 ttggacggagggacttttttgatggacgtctgacaaattcaaagattaagttgatatttcgcataattgaaggatgaagttggccgacgtgtaaaaattc 33256424  T
Q  133 aaggacgaatttga 146  Q
    | ||||||||||||    
T  33256423 agggacgaatttga 33256410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 106
Target Start/End: Original strand, 38178095 - 38178167
Alignment:
Q  34 tggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcaggga 106  Q
    |||||| ||||||| ||||||||||||||||  ||||||||  ||||| ||||||||||| | |||| |||||    
T  38178095 tggacgaagggacctttttgatggacgtctgacaaattcagatactaaattgatatttcgcataattgaggga 38178167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 106
Target Start/End: Original strand, 38205319 - 38205391
Alignment:
Q  34 tggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcaggga 106  Q
    |||||| ||||||| ||||||||||||||||  ||||||||  ||||| ||||||||||| | |||| |||||    
T  38205319 tggacgaagggacctttttgatggacgtctgacaaattcagatactaaattgatatttcgcataattgaggga 38205391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 38597068 - 38597012
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatat 89  Q
    |||||| |||||||| ||||||||||||||||  ||||| ||||||||| |||||||    
T  38597068 ttggacagagggacctttttgatggacgtctgacaaattaagggactaagttgatat 38597012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 153
Target Start/End: Complemental strand, 41493931 - 41493847
Alignment:
Q  69 attcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 153  Q
    ||||| ||||||| | ||||||||  ||||||   ||||||| || || ||||||| |||||||||||||||| |||||||||||    
T  41493931 attcatggactaaatagatatttcacaaaatttgaggacgaatttggctgatttttgaaaattcaaggacgaagttgaggtatta 41493847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 110
Target Start/End: Complemental strand, 19997241 - 19997164
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 110  Q
    ||||||||| |||  | ||||||| | |||||| ||||||||| | ||||||||||||| ||||||||  ||||||||    
T  19997241 ttggacggaaggatgaatttgatgaatgtctgttaaattcaggaagtaatttgatattttgaaaaatttggggacgaa 19997164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 100
Target Start/End: Complemental strand, 27349281 - 27349212
Alignment:
Q  31 ttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaatt 100  Q
    ||||||||||||||||||||||||| |||||  |  ||||||| |||| || | ||||||||| ||||||    
T  27349281 ttttggacggagggaccattttgatagacgtgagagaaattcaaggacaaaatcgatatttcgcaaaatt 27349212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 156
Target Start/End: Complemental strand, 28819388 - 28819348
Alignment:
Q  116 ccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||| |||||||||||| |||||||| |||||||||    
T  28819388 ccgatttttaaaaattcaaggaggaatttgatgtattagtc 28819348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 117; Significance: 8e-60; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 12 - 156
Target Start/End: Original strand, 53190759 - 53190903
Alignment:
Q  12 tcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 111  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||     
T  53190759 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaat 53190858  T
Q  112 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    || |||||||||| |||||||||||||||||||||||||||||||    
T  53190859 ttggccgattttttaaaattcaaggacgaatttgaggtattagtc 53190903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 12 - 156
Target Start/End: Original strand, 27899081 - 27899225
Alignment:
Q  12 tcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 111  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||| |||||||| |||||||     
T  27899081 tcatcaccactaacggagcttttggacggagggaccatttttatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaat 27899180  T
Q  112 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    || |||||||||| |||||||||||||||||||||||||||||||    
T  27899181 ttggccgattttttaaaattcaaggacgaatttgaggtattagtc 27899225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 12 - 156
Target Start/End: Complemental strand, 41977894 - 41977750
Alignment:
Q  12 tcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 111  Q
    ||||||||| ||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||| |     
T  41977894 tcatcaccattaacgaagcttttggacggagggaccattttgacggacgtctgtaaaattcagggactaatttgatatttcgccaaattcagggacgtat 41977795  T
Q  112 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    || |||||||||| |||||||||||||||||||||||||||||||    
T  41977794 ttggccgattttttaaaattcaaggacgaatttgaggtattagtc 41977750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 9 - 156
Target Start/End: Complemental strand, 21348870 - 21348723
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||| |||||    
T  21348870 acattatcaccactaacagagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacg 21348771  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    || || |||||||||| ||||||||||||| |||||||||||||||||    
T  21348770 aatttggccgattttttaaaattcaaggacaaatttgaggtattagtc 21348723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 12 - 156
Target Start/End: Original strand, 2226152 - 2226296
Alignment:
Q  12 tcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 111  Q
    |||||||||||||  ||| ||||||||||||||| |||||||||| |||||||||||||||||||||||| | ||||||||| ||||||||||||||||     
T  2226152 tcatcaccactaacagagtttttggacggagggaacattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaat 2226251  T
Q  112 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    || |||||||||| |||||||||||||||||||||||||||||||    
T  2226252 ttggccgattttttaaaattcaaggacgaatttgaggtattagtc 2226296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 9 - 156
Target Start/End: Complemental strand, 51684757 - 51684610
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||| | |||||||||||| |    
T  51684757 acatcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatattttgcaaaattcagggatg 51684658  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    || || || ||||||| |||||||||||||||||||||| ||||||||    
T  51684657 aatttggctgatttttgaaaattcaaggacgaatttgagatattagtc 51684610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 9 - 162
Target Start/End: Original strand, 3152215 - 3152368
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||| | ||| ||| |||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  3152215 acatcatcactattaacggaccttttggacggagggacggatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggatg 3152314  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtccttttt 162  Q
    ||||| ||||||||||||||||| |||||  ||||||||||||||||| |||||    
T  3152315 aaattggccgatttttcaaaatttaaggataaatttgaggtattagtcgttttt 3152368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 156
Target Start/End: Complemental strand, 54898574 - 54898437
Alignment:
Q  19 cactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccg 118  Q
    |||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| | ||||||||| |||||||||||||||| ||  |||    
T  54898574 cactaacggagcttttggacggagagaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccg 54898475  T
Q  119 atttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    |||||| |||||||||||||||||||||||||||||||    
T  54898474 attttttaaaattcaaggacgaatttgaggtattagtc 54898437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 30 - 150
Target Start/End: Complemental strand, 2660338 - 2660218
Alignment:
Q  30 cttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaa 129  Q
    ||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| | |||||||||||||    
T  2660338 cttttggacggagggacgaatttgatggacgtctgtaaaattcaaggactaatttgatatttcgcaaaattcagggacgaaattggtcgatttttcaaaa 2660239  T
Q  130 ttcaaggacgaatttgaggta 150  Q
    |||||||||||||||||||||    
T  2660238 ttcaaggacgaatttgaggta 2660218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 9 - 157
Target Start/End: Original strand, 30599915 - 30600063
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| | ||||||||| |||||||||||||     
T  30599915 acatcatcaccactaacagagcttttggacggagggaccattttgatcgacgtctctaaaattcagggactaaatagatatttcgcaaaattcagggaca 30600014  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 157  Q
    || || |||||||| | |||||| |||||||||||||||||||||||||    
T  30600015 aatttggccgatttgtaaaaatttaaggacgaatttgaggtattagtcc 30600063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 9 - 156
Target Start/End: Complemental strand, 44794354 - 44794208
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||| | ||| ||| ||||||||||||||||| | |||||||||| |||| |||||||||||||||||||||||||||| |||||||||||| |    
T  44794354 acatcatcactattaacggaccttttggacggagggacgaatttgatggacttctgcaaaattcagggactaatttgatatttcgcaaaattcagggatg 44794255  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  44794254 aaattggccga-ttttcaaaattcaaggacgaatttgaggtattagtc 44794208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 43765284 - 43765139
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||  ||||| | ||||||||| ||||||| || |||    
T  43765284 acatcatcaccactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcagaaactaaatagatatttcgcaaaattccggaacg 43765185  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattag 154  Q
    || ||  ||||||||| |||||||||||||||||||||||||||||    
T  43765184 aatttgaccgatttttgaaaattcaaggacgaatttgaggtattag 43765139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 156
Target Start/End: Complemental strand, 17515457 - 17515310
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||||||||| || | |||||||| |||||||||||||||||||||| ||||||||||||||||||| | ||||||||| ||||||||| || |    
T  17515457 acatcatcaccactaacggtgattttggacagagggaccattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcagcgatg 17515358  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    || || ||| |||||| |||||||||||| ||||||||||||||||||    
T  17515357 aatttggccaatttttaaaaattcaaggaagaatttgaggtattagtc 17515310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 156
Target Start/End: Original strand, 23293167 - 23293314
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||| | ||||||||| |||||||| || ||    
T  23293167 acatcatcaccactaacggagcttttggacggagggactattttgatggacgtttgtaaaattcatggactaaatagatatttcgcaaaattcaagggcg 23293266  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    || || || |||||||| ||||||||| || |||||||||||||||||    
T  23293267 aatttggctgatttttcgaaattcaagaacaaatttgaggtattagtc 23293314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 35905712 - 35905843
Alignment:
Q  12 tcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 111  Q
    ||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||| ||||||||||||||||     
T  35905712 tcatcaccactaccggagcttttggacggagggaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaat 35905811  T
Q  112 tttgccgatttttcaaaattcaaggacgaatt 143  Q
    ||  ||||||||| |||||||||||| |||||    
T  35905812 ttgaccgattttttaaaattcaaggatgaatt 35905843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 153
Target Start/End: Complemental strand, 42279654 - 42279510
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||| | ||||||| | ||||    
T  42279654 acatcatcaccactaacagagcttttggacggagggaccattttgatagacgtctgtaaaattcagggactaaatagatattttgcaaaattctgagacg 42279555  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 153  Q
    || |  || ||||||| ||||||||| ||||||||||||||||||    
T  42279554 aattgagctgatttttgaaaattcaatgacgaatttgaggtatta 42279510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 12 - 156
Target Start/End: Complemental strand, 46112631 - 46112487
Alignment:
Q  12 tcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 111  Q
    |||||||||||||   |||||||| ||||||||||||||||||||||||||||||||||||| ||||||| | ||||||| | ||||||||   |||||     
T  46112631 tcatcaccactaacatagcttttgaacggagggaccattttgatggacgtctgtaaaattcatggactaaatagatattttgcaaaattcaataacgaat 46112532  T
Q  112 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    || |||||||||| |||||||||||||||||||||||||||||||    
T  46112531 ttggccgattttttaaaattcaaggacgaatttgaggtattagtc 46112487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 67 - 157
Target Start/End: Original strand, 41979352 - 41979442
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 157  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  41979352 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcc 41979442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 38193510 - 38193599
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  38193510 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 38193599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 46308896 - 46308807
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  46308896 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 46308807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 53094273 - 53094362
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  53094273 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 53094362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 3150341 - 3150252
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  3150341 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 3150252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 54900074 - 54900163
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  54900074 aaattcagggacaaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 54900163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 12 - 153
Target Start/End: Complemental strand, 2377173 - 2377032
Alignment:
Q  12 tcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 111  Q
    ||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||| |||||| |  || ||| | ||||||||||||||||     
T  2377173 tcatcaccactaacggagcttttagacggaggaaccattttgatggacgtctgtaaaattcagagactaaatatattttttgcaaaattcagggacgaat 2377074  T
Q  112 tttgccgatttttcaaaattcaaggacgaatttgaggtatta 153  Q
    || | | |||||| |||||||||  |||||||||||||||||    
T  2377073 ttggtcaatttttgaaaattcaaaaacgaatttgaggtatta 2377032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 38191984 - 38191895
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||    
T  38191984 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccaatttttcaaaatttaaggacgaatttgaggtattagtc 38191895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 44795890 - 44795979
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||| ||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  44795890 aaattcatggactaatttgatatttcgcaaaattcaggaacgaaattagccgatttttcaaaattcaaggacgaatttgaggtattagtc 44795979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 46310436 - 46310525
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||    
T  46310436 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaagacgaatttgaggtattagtc 46310525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 53187831 - 53187742
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||    
T  53187831 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacaaatttgaggtattagtc 53187742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 46609238 - 46609149
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||    
T  46609238 aaattcagggactaatttgatatttcacaaaattcagggacgaaattggccgatttttcaaaattcaagaacgaatttgagatattagtc 46609149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 46611303 - 46611392
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||  |  ||||||||||||||||||||||||||||||||||||||    
T  46611303 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgacaaatttttcaaaattcaaggacgaatttgaggtattagtc 46611392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 67 - 162
Target Start/End: Complemental strand, 35903914 - 35903819
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtccttttt 162  Q
    ||||||||||||||||||||||||| | |||||||||||| |||||| || ||||||||||||||||||||| ||||||||||||||||| |||||    
T  35903914 aaattcagggactaatttgatattttgcaaaattcagggatgaaattggctgatttttcaaaattcaaggacaaatttgaggtattagtcgttttt 35903819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 28626500 - 28626411
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||  ||||||||||||||||||||||| | |||||||||||||||    
T  28626500 aaattcagggactattttgatatttcgaataattcagggacgaaattgaccgatttttcaaaattcaaggactattttgaggtattagtc 28626411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 53092712 - 53092623
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||| ||| ||||||||||||| || |||||||||||||||||||||    
T  53092712 aaattcagggattaatttgatatttcgcaaaattcagggacgaaattggccaatttttcaaaatttaaagacgaatttgaggtattagtc 53092623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 67 - 151
Target Start/End: Original strand, 2661908 - 2661992
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtat 151  Q
    ||||||| ||||||||||||||||||| |||||||| |||||||||| | |||||||||||||||||||||||||||||||||||    
T  2661908 aaattcatggactaatttgatatttcgcaaaattcacggacgaaattggtcgatttttcaaaattcaaggacgaatttgaggtat 2661992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 9 - 113
Target Start/End: Original strand, 19987591 - 19987695
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||| |||||  || |||||||||||||||||   |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||    
T  19987591 acatcatcactactaacagaccttttggacggagggactgatttgatggacgtgtgtaaaatttagggactaatttgatatttcgcaaaattcagggacg 19987690  T
Q  109 aaatt 113  Q
    |||||    
T  19987691 aaatt 19987695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 7883417 - 7883328
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||| ||||||||||||||||  |||||| |||||||||||| |||||||||||||||||||| |||||| ||||||||||||||    
T  7883417 aaattcaggaactaatttgatatttcacaaaatttagggacgaaattggccgatttttcaaaattcaaagacgaaattgaggtattagtc 7883328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 7884873 - 7884939
Alignment:
Q  12 tcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggac 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  7884873 tcatcaccactaacggaacttttggacggagggaccattttgatggacgtctgtaaaattcagggac 7884939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 611222 - 611311
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    |||||||||| |||| | | |||||||||||||||||||||||| || || ||||||| |||||||||||||||||||||||||||||||    
T  611222 aaattcaggggctaaatagctatttcgaaaaattcagggacgaatttggctgattttttaaaattcaaggacgaatttgaggtattagtc 611311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 23291659 - 23291570
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    |||||||| |||||| | ||||||||| |||||||||||||||| || |||||||||| ||||||||||||||||||| |||||||||||    
T  23291659 aaattcagagactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttaaggtattagtc 23291570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 46197867 - 46197766
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    ||||||||| |||||| ||| |||||||||| |||||||||||| |||||||||||||||||||||| ||||| | ||||||| | ||||||||| ||||    
T  46197867 acatcatcatcactaacggaacttttggacgaagggaccattttaatggacgtctgtaaaattcaggaactaaatagatattttgcaaaattcagagacg 46197768  T
Q  109 aa 110  Q
    ||    
T  46197767 aa 46197766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 48830803 - 48830896
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattca 102  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||  |||||| | |||||||||  |||||||    
T  48830803 acatcatcaccactaacagagcttttggacggagggaccattttgatggacgtccgtaaaattcaaagactaaatagatatttcgttaaattca 48830896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 44276193 - 44276265
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaa 81  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  44276193 acatcatcaccactaacagagcttttggacggagggaccattttgatgggcgtctgtaaaattcaaggactaa 44276265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 67 - 155
Target Start/End: Original strand, 2378983 - 2379071
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagt 155  Q
    ||||||| ||||||| | | ||||| | |||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||    
T  2378983 aaattcaaggactaaatagctattttgcaaaattcagggacgaaattgaccgattttttaaaattcaaggacgaatttgaggtattagt 2379071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 40 - 146
Target Start/End: Complemental strand, 23774268 - 23774162
Alignment:
Q  40 gagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacg 139  Q
    |||||||  ||||||||||||||||  ||||||||||||||| ||||||||||| | |||| ||||||||| || ||||| |  | ||||||||||||||    
T  23774268 gagggacttttttgatggacgtctgacaaattcagggactaaattgatatttcgcataattgagggacgaatttggccgactcgtgaaaattcaaggacg 23774169  T
Q  140 aatttga 146  Q
    |||||||    
T  23774168 aatttga 23774162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 32 - 146
Target Start/End: Original strand, 23888772 - 23888886
Alignment:
Q  32 tttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaatt 131  Q
    |||||||||||||||| ||||||||||||| ||  |||||||||||||||  |||||||||| | |||| ||||||||| || |||||  | | ||||||    
T  23888772 tttggacggagggacctttttgatggacgtttgacaaattcagggactaagctgatatttcgcataattgagggacgaagttggccgacgtgtgaaaatt 23888871  T
Q  132 caaggacgaatttga 146  Q
    || ||||||||||||    
T  23888872 cagggacgaatttga 23888886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 48634000 - 48633887
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattc 132  Q
    ||||||||||||||| ||||||||||||||||  ||||||||||||||| ||||||||||| | |||| | ||||||| ||  ||||    | |||||||    
T  48634000 ttggacggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgatggacgaatttgaccgacccgtgaaaattc 48633901  T
Q  133 aaggacgaatttga 146  Q
    ||||||||||||||    
T  48633900 aaggacgaatttga 48633887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 87 - 156
Target Start/End: Complemental strand, 30598406 - 30598337
Alignment:
Q  87 tatttcgaaaaattcagggacgaaatttg-ccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||| ||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  30598406 tatttcgcaaaattcagggac-aaatttgaccgatttttgaaaattcaaggacgaatttgaggtattagtc 30598337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 87 - 161
Target Start/End: Complemental strand, 44268050 - 44267976
Alignment:
Q  87 tatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcctttt 161  Q
    ||||||| ||||||||| || ||| || |||||||||| ||||||||||||||||||||||||||||||| ||||    
T  44268050 tatttcgcaaaattcagagatgaatttggccgatttttgaaaattcaaggacgaatttgaggtattagtcatttt 44267976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 156
Target Start/End: Original strand, 7884927 - 7884988
Alignment:
Q  95 aaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    |||||||||||||| | || |||||||||| |||||||||||||||||||||||||||||||    
T  7884927 aaaattcagggacgtatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 7884988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 40508912 - 40509025
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattc 132  Q
    ||||||||||||||  ||||||||||||||||  ||||||| ||| ||| ||||||||||| | |||| ||||||||| || |||||    | |||||||    
T  40508912 ttggacggagggacatttttgatggacgtctgacaaattcaaggattaagttgatatttcgcataattgagggacgaatttggccgacccgtgaaaattc 40509011  T
Q  133 aaggacgaatttga 146  Q
    ||||||||||||||    
T  40509012 aaggacgaatttga 40509025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 45898349 - 45898462
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattc 132  Q
    ||||||||||||||| ||||||| ||||||||  ||||||| ||||||| ||||||||||| | ||||||||||| || || | |||  | | |||||||    
T  45898349 ttggacggagggacctttttgatagacgtctgacaaattcaaggactaagttgatatttcgcataattcagggacaaagttggtcgacgtgtgaaaattc 45898448  T
Q  133 aaggacgaatttga 146  Q
    | ||||||||||||    
T  45898449 agggacgaatttga 45898462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 42282473 - 42282559
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 153  Q
    ||||||| ||||||| | ||||||||| |||||||||  ||||| ||  | ||||||| ||||||||||||||||||||||||||||    
T  42282473 aaattcaaggactaaatagatatttcgcaaaattcagaaacgaatttgactgatttttgaaaattcaaggacgaatttgaggtatta 42282559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 156
Target Start/End: Original strand, 51686413 - 51686483
Alignment:
Q  86 atatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    |||||||| |||||| ||||||||| || || ||||||| |||||| ||||||||||||||||||||||||    
T  51686413 atatttcgcaaaatttagggacgaatttggctgatttttgaaaatttaaggacgaatttgaggtattagtc 51686483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 2977330 - 2977443
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattc 132  Q
    |||| |||| ||||| ||||||||||||| ||  ||||| ||||||| | ||||||||||| | |||| ||||| ||| || |||||||  | |||||||    
T  2977330 ttgggcggatggacctttttgatggacgtatgacaaatttagggactgaattgatatttcgcataattaagggatgaatttggccgattcgtaaaaattc 2977429  T
Q  133 aaggacgaatttga 146  Q
    ||||||||||||||    
T  2977430 aaggacgaatttga 2977443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 600853 - 600805
Alignment:
Q  12 tcatcaccactaatggagcttttggacggagggaccattttgatggacg 60  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  600853 tcatcaccactaacggagcttttagacggagggaccattttgatggacg 600805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 33 - 100
Target Start/End: Original strand, 25535250 - 25535317
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaatt 100  Q
    |||||||||||||  | |||| ||||||||||| ||||||||||||||| || |||||||||||||||    
T  25535250 ttggacggagggatgaatttggtggacgtctgttaaattcagggactaacttaatatttcgaaaaatt 25535317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 106
Target Start/End: Original strand, 33113184 - 33113254
Alignment:
Q  36 gacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcaggga 106  Q
    |||||||||||| ||||||||||||||||  ||||| ||||||||| ||||||||||| | |||| |||||    
T  33113184 gacggagggacctttttgatggacgtctgacaaatttagggactaagttgatatttcgcataattgaggga 33113254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 75 - 157
Target Start/End: Complemental strand, 48829437 - 48829355
Alignment:
Q  75 ggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 157  Q
    ||||||| | ||||||||| |||||||||| |  || || || || |||| ||||||||||||||||||||||||||||||||    
T  48829437 ggactaaatagatatttcgcaaaattcaggaataaatttggctgaattttgaaaattcaaggacgaatttgaggtattagtcc 48829355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 18430272 - 18430385
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattc 132  Q
    ||||||||||||||| ||||  ||||||||||  | ||||||||||||| ||||||||||| | |||| ||||| ||| || || ||    | |||||||    
T  18430272 ttggacggagggacctttttattggacgtctgacatattcagggactaagttgatatttcgcataattgagggatgaatttggctgacccgttaaaattc 18430371  T
Q  133 aaggacgaatttga 146  Q
    ||||||||||||||    
T  18430372 aaggacgaatttga 18430385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 23876979 - 23877044
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaa 98  Q
    |||||||||||||  | |||||||||||| ||| |||||||| ||||||||||||||||| |||||    
T  23876979 ttggacggagggatgaatttgatggacgtttgttaaattcagagactaatttgatatttcaaaaaa 23877044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 31887453 - 31887566
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattc 132  Q
    ||||||||||||||| ||||||| ||| ||||  ||||||||||||||| ||||||||||| | |||| | ||  ||| ||  |||||   | |||||||    
T  31887453 ttggacggagggacctttttgatagacatctgacaaattcagggactaagttgatatttcgcataattgatggttgaatttgaccgatccgtgaaaattc 31887552  T
Q  133 aaggacgaatttga 146  Q
    ||||||||||||||    
T  31887553 aaggacgaatttga 31887566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 24382894 - 24382953
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttc 92  Q
    ||||||||||||||| ||||||||||||||||  |||| || ||||||| ||||||||||    
T  24382894 ttggacggagggacctttttgatggacgtctgacaaatccatggactaagttgatatttc 24382953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 33 - 91
Target Start/End: Complemental strand, 1845907 - 1845849
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatattt 91  Q
    ||||||||||||||  ||||||||||||||||| |||||||  |||||| |||||||||    
T  1845907 ttggacggagggacgtttttgatggacgtctgtcaaattcaaagactaagttgatattt 1845849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 54412547 - 54412633
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 153  Q
    ||||||||| ||||| | ||||| ||| |||||||| ||||||| ||  || |||||| |||||||| ||||||||||||| |||||    
T  54412547 aaattcaggaactaaatagatatctcgcaaaattcaaggacgaatttgaccaattttttaaaattcacggacgaatttgagatatta 54412633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 146
Target Start/End: Original strand, 41021008 - 41021117
Alignment:
Q  37 acggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 136  Q
    ||||||||||| ||||||||||||||||  |||||||||||  || |||| |||||| | |||| |||||| || || |||||    | |||||||| ||    
T  41021008 acggagggacctttttgatggacgtctgacaaattcagggatgaaattgaaatttcgcataattgagggactaatttggccgacgcgtgaaaattcaggg 41021107  T
Q  137 acgaatttga 146  Q
    ||||||||||    
T  41021108 acgaatttga 41021117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 117 - 156
Target Start/End: Complemental strand, 600764 - 600725
Alignment:
Q  117 cgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    |||||||| |||||||||||| ||||||||||||||||||    
T  600764 cgattttttaaaattcaaggatgaatttgaggtattagtc 600725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 5133133 - 5133074
Alignment:
Q  19 cactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggac 78  Q
    |||||| ||||| |||||||||| |||| |||||||||||||| ||| ||||||| ||||    
T  5133133 cactaacggagcatttggacggaaggactattttgatggacgtttgttaaattcaaggac 5133074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 87 - 146
Target Start/End: Original strand, 17516993 - 17517052
Alignment:
Q  87 tatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 146  Q
    ||||||| |||||||| | ||||| ||  ||||||||| |||||||||||||||||||||    
T  17516993 tatttcgcaaaattcatgaacgaatttgaccgatttttgaaaattcaaggacgaatttga 17517052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 45257208 - 45257279
Alignment:
Q  20 actaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatattt 91  Q
    ||||| |||||  ||||||||||||||  |||| |||||||||||  ||||||||| ||||| |||||||||    
T  45257208 actaacggagcacttggacggagggacattttttatggacgtctgacaaattcaggaactaagttgatattt 45257279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 54092815 - 54092764
Alignment:
Q  27 gagcttttggacggagggaccattttgatggacgtctgtaaaattcagggac 78  Q
    |||| |||||||||| |||| |||||||||||||| ||| ||||||||||||    
T  54092815 gagcatttggacggaaggactattttgatggacgtttgttaaattcagggac 54092764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 46114105 - 46114195
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttc-aaaattcaaggacgaatttgaggtattagtc 156  Q
    |||||||  |||||| | ||||||||| |||||||| |||| || || ||||||||||  ||||||||||||  ||||||||||| |||||    
T  46114105 aaattcaatgactaaatagatatttcgcaaaattcaaggacaaatttggccgatttttttaaaattcaaggataaatttgaggtagtagtc 46114195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 21350625 - 21350694
Alignment:
Q  87 tatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||| |||||||||  ||||| || |||||||||  |||| ||| ||| ||||||||||||||||||    
T  21350625 tatttcgcaaaattcagtaacgaatttggccgattttaaaaaaatcacggatgaatttgaggtattagtc 21350694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 33852671 - 33852744
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcaggga 106  Q
    |||||| |||||||| ||||||||||||||||  ||||||||  | ||| ||||||||||| | |||| |||||    
T  33852671 ttggacagagggacctttttgatggacgtctgataaattcagaaattaaattgatatttcgcataattgaggga 33852744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 51454251 - 51454364
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattc 132  Q
    |||||| |||||||  |||| ||||| || ||  |||||||  |||||||||||||||||| | |||| ||| | ||| || ||||||   | |||||||    
T  51454251 ttggacagagggacattttttatggatgtttgacaaattcaaagactaatttgatatttcgcataattgaggaatgaatttggccgatccgtgaaaattc 51454350  T
Q  133 aaggacgaatttga 146  Q
    ||||||||||||||    
T  51454351 aaggacgaatttga 51454364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 146
Target Start/End: Complemental strand, 41944666 - 41944586
Alignment:
Q  66 aaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 146  Q
    ||||||||||||||| ||||||||||||  |||||  |||||||| || ||||||   | |||||||| ||||||| ||||    
T  41944666 aaaattcagggactattttgatatttcgttaaattgggggacgaatttggccgatccctgaaaattcagggacgaaattga 41944586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 117; Significance: 8e-60; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 12 - 156
Target Start/End: Original strand, 4855946 - 4856090
Alignment:
Q  12 tcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 111  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |     
T  4855946 tcatcaccattaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtat 4856045  T
Q  112 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    || |||||||||| |||||||||||||||||||||||||||||||    
T  4856046 ttggccgattttttaaaattcaaggacgaatttgaggtattagtc 4856090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 12 - 156
Target Start/End: Original strand, 34778118 - 34778262
Alignment:
Q  12 tcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 111  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |     
T  34778118 tcatcaccactaacggagcttttggacggagggaccattttgatggacatctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtat 34778217  T
Q  112 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    || |||||||||| |||||||||||||||||||||||||||||||    
T  34778218 ttggccgattttttaaaattcaaggacgaatttgaggtattagtc 34778262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 9 - 156
Target Start/End: Original strand, 46583533 - 46583680
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||||| ||| ||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||     
T  46583533 acatcatcaccattaacggaccttttggacggagggacaaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggaca 46583632  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    |||||  |||||||||||||||||||||||||||||||||||||||||    
T  46583633 aaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 46583680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 9 - 156
Target Start/End: Complemental strand, 2869726 - 2869579
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| || |||||| | ||||||||| ||||||||||||||    
T  2869726 acatcatcaccactaacagagcttttggacggagggaccattttgatggacgtctgtaaaatttagagactaaatagatatttcgcaaaattcagggacg 2869627  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    || ||  ||||||||| |||||||||||||||||||||||||||||||    
T  2869626 aatttgaccgatttttgaaaattcaaggacgaatttgaggtattagtc 2869579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 12 - 156
Target Start/End: Original strand, 6818658 - 6818802
Alignment:
Q  12 tcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 111  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |  |||| |||||||||      
T  6818658 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgctaaatccagggacgagt 6818757  T
Q  112 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    || |||||||||| |||||||||||||||||||||||||||||||    
T  6818758 ttggccgattttttaaaattcaaggacgaatttgaggtattagtc 6818802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 12 - 156
Target Start/End: Original strand, 25278348 - 25278492
Alignment:
Q  12 tcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 111  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| | | ||||||| ||||||||||||||||     
T  25278348 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtatgtaaaattcaaggactaaataggtatttcgcaaaattcagggacgaat 25278447  T
Q  112 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||  ||||||||| |||||||||||||||||||||||||||||||    
T  25278448 ttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 25278492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 12 - 156
Target Start/End: Original strand, 31238475 - 31238619
Alignment:
Q  12 tcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 111  Q
    ||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||| ||     
T  31238475 tcatcaccactaacggagcttttggacagatggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacaaat 31238574  T
Q  112 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    || |||||||||| ||||||||||||| |||||||||||||||||    
T  31238575 ttggccgattttttaaaattcaaggacaaatttgaggtattagtc 31238619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 9 - 153
Target Start/End: Original strand, 33602621 - 33602765
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||  ||||| ||| ||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  33602621 acatcatcattactaacggaccttttggacggagggactaatttgacggacgtctgtaaaattcagggactaatttgatatttcacaaaattcagggacg 33602720  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 153  Q
    |||||  ||||||||||||||||||||||||||||||||||||||    
T  33602721 aaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 33602765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 12 - 159
Target Start/End: Complemental strand, 37344486 - 37344339
Alignment:
Q  12 tcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 111  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||  |||||| | | ||||||| ||||||||||||||||     
T  37344486 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtatgtaaaattcaaagactaaataggtatttcgcaaaattcagggacgaat 37344387  T
Q  112 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtcctt 159  Q
    ||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  37344386 ttgaccgattttttaaaattcaaggacgaatttgaggtattagtcctt 37344339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 9 - 156
Target Start/End: Complemental strand, 27087430 - 27087283
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||||||||| |||||||||||||||| || |||||||||||||||| ||||||||||||||||||| | ||||||||| |||||||||||||     
T  27087430 acatcatcaccactaacggagcttttggacggatgggccattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcagggac- 27087332  T
Q  109 aaatttg-ccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  27087331 aaatttgaccgattttttaaaatttaaggacgaatttgaggtattagtc 27087283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 9 - 156
Target Start/End: Original strand, 9121645 - 9121792
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||| | ||| |||  ||||||||||||||||   ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  9121645 acatcatcactattaacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaatttagggacg 9121744  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||| |||||||||||||||||||||||| | |||||||||||||||    
T  9121745 aaattggccgatttttcaaaattcaaggactattttgaggtattagtc 9121792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 31 - 156
Target Start/End: Original strand, 47013081 - 47013206
Alignment:
Q  31 ttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaat 130  Q
    ||||||||||||||||   |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  47013081 ttttggacggagggactgatttgatggacgtttgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaaattgtccgatttttcaaaat 47013180  T
Q  131 tcaaggacgaatttgaggtattagtc 156  Q
    |||||||| | |||||||||||||||    
T  47013181 tcaaggactattttgaggtattagtc 47013206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 50556078 - 50556221
Alignment:
Q  13 catcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaat 112  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| | ||||||||| ||||||||| |||||| |    
T  50556078 catcaccactaacggagcttttggacggagggaccattttgatagacgtctgtaaaatttagggactaaatagatatttcgcaaaattcagagacgaatt 50556177  T
Q  113 ttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    |  | ||||||| ||||||||| |||||||||||| ||||||||    
T  50556178 tgactgattttttaaaattcaaagacgaatttgagatattagtc 50556221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 156
Target Start/End: Original strand, 51896129 - 51896276
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    ||||||||||||||||  |||||||||||||||||||| |||||||||||| ||||||||||||||||||||| | ||||||||| |||||||||||||     
T  51896129 acatcatcaccactaacagagcttttggacggagggactattttgatggacatctgtaaaattcagggactaaatagatatttcgcaaaattcagggac- 51896227  T
Q  109 aaatttg-ccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||| | ||||||| |||||| ||||||| ||||||||||| ||||    
T  51896228 aaatttgactgattttttaaaatttaaggacggatttgaggtatcagtc 51896276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 9 - 156
Target Start/End: Original strand, 3013447 - 3013600
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatg------gacgtctgtaaaattcagggactaatttgatatttcgaaaaattca 102  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||      ||||||||||||||||||||||||| | ||||||||| ||||||||    
T  3013447 acatcatcaccactaacggagcttttggacggagggactattttgatgtccatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattca 3013546  T
Q  103 gggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
     ||||||| ||  | ||| ||| |||||||||||||||||||||||||||||||    
T  3013547 tggacgaatttgactgatgttttaaaattcaaggacgaatttgaggtattagtc 3013600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 15104588 - 15104487
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||| |||    
T  15104588 acatcatcaccactaatggagcttttggacggaaggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaggaacg 15104489  T
Q  109 aa 110  Q
    ||    
T  15104488 aa 15104487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 34776658 - 34776569
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  34776658 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 34776569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 8169568 - 8169657
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  8169568 aaattcagggactaatttgatattttgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 8169657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 26223676 - 26223587
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  26223676 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 26223587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 46582099 - 46582010
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  46582099 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacaaatttgaggtattagtc 46582010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 8168029 - 8167942
Alignment:
Q  69 attcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  8168029 attcagggactaatttgatatttcgcaaaattcagagacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 8167942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 67 - 158
Target Start/End: Original strand, 37345962 - 37346053
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcct 158  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  37345962 aaattcagggactaatttgatatttcgcaaaattcagggatgaaattggtcgatttttcaaaattcaaggacgaatttgaggtattagtcct 37346053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 9120128 - 9120039
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| | |||||||||||||||    
T  9120128 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaaggactattttgaggtattagtc 9120039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 25276831 - 25276742
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||||||||||||||| |||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  25276831 aaattcagggactaatttgatatttcgcaaaattcaaggatgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 25276742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 27089279 - 27089368
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||| ||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27089279 aaattcagggattaatttgatatttcacaaaattcaaggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 27089368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 54 - 163
Target Start/End: Original strand, 25278975 - 25279084
Alignment:
Q  54 atggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 153  Q
    |||||||||||||||||||||||||||| | ||||||||| |||||| ||| ||||| || || ||||||| ||||||||||||||||||||||||||||    
T  25278975 atggacgtctgtaaaattcagggactaaatagatatttcgcaaaatttaggaacgaatttggctgatttttgaaaattcaaggacgaatttgaggtatta 25279074  T
Q  154 gtccttttta 163  Q
    ||| ||||||    
T  25279075 gtcattttta 25279084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 47011545 - 47011456
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||| | |||||||||||||||    
T  47011545 aaattcagggactaatttgatatttcgaaaaattcatggacgaaattgtccgatttttcaaaattcaaggactattttgaggtattagtc 47011456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 67 - 157
Target Start/End: Complemental strand, 4854499 - 4854409
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 157  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||   |||||||||||||||||||||||||||||| ||||||||||    
T  4854499 aaattcagggactaatttgatctttcgcaaaattcagggacgaaattgaacgatttttcaaaattcaaggacgaatttgaagtattagtcc 4854409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 1444181 - 1444270
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||| |||||| | |||||||||||||||    
T  1444181 aaattcagggactaatttgatattttgaaaaattcagggacaaaattggccgatttttcaaaatttaaggactattttgaggtattagtc 1444270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 9 - 153
Target Start/End: Original strand, 52643597 - 52643736
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||||||||| ||||||||||||||||| |||||| |     ||||| | ||||||||||||||||| |  |||||||| ||||||||||||||    
T  52643597 acatcatcaccactaacggagcttttggacggagagaccatct-----gacgtttataaaattcagggactaaataaatatttcgcaaaattcagggacg 52643691  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 153  Q
    || ||  | ||||||| |||||| |||||||||||||||||||||    
T  52643692 aatttaactgatttttaaaaatttaaggacgaatttgaggtatta 52643736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 31236908 - 31236819
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttg-ccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||| ||||| | ||||||||| ||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  31236908 aaattcaggaactaaatagatatttcgcaaaattcagggac-aaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 31236819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 67 - 145
Target Start/End: Complemental strand, 33599307 - 33599229
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttg 145  Q
    |||||||| || ||||||||||||||| |||||||| ||||||| ||  ||||||||||||||||||||||||||||||    
T  33599307 aaattcagagattaatttgatatttcgcaaaattcatggacgaatttgaccgatttttcaaaattcaaggacgaatttg 33599229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 86 - 156
Target Start/End: Complemental strand, 52641958 - 52641888
Alignment:
Q  86 atatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    |||||||| |||||||||||||||| || || ||||||| |||||||||||||||||||||||||||||||    
T  52641958 atatttcgcaaaattcagggacgaatttggctgatttttgaaaattcaaggacgaatttgaggtattagtc 52641888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 2871096 - 2871165
Alignment:
Q  87 tatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||| |||||||||||||||| || |||||||||| |||||||||||||||||||||| ||||||||    
T  2871096 tatttcgcaaaattcagggacgaatttagccgatttttaaaaattcaaggacgaatttgagatattagtc 2871165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 42134605 - 42134492
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattc 132  Q
    ||||||||||||||| ||||||||||||||||  ||||||||||||||| ||||||||||| | |||| ||||| ||  || |||||    | |||||||    
T  42134605 ttggacggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgattttggccgacccgtaaaaattc 42134506  T
Q  133 aaggacgaatttga 146  Q
    ||||||||||||||    
T  42134505 aaggacgaatttga 42134492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 156
Target Start/End: Complemental strand, 33599248 - 33599187
Alignment:
Q  95 aaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    |||||||| ||||||| ||  |||||||||||||||||||||||||||||||||||||||||    
T  33599248 aaaattcaaggacgaatttgcccgatttttcaaaattcaaggacgaatttgaggtattagtc 33599187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 37088156 - 37088225
Alignment:
Q  87 tatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||| |||||||||| ||||| || |||||||||| |||||||||||| ||||||||||||||||||    
T  37088156 tatttcgcaaaattcaggaacgaatttggccgattttttaaaattcaaggaagaatttgaggtattagtc 37088225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 95 - 155
Target Start/End: Complemental strand, 1442611 - 1442551
Alignment:
Q  95 aaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagt 155  Q
    ||||||||||||||||||| |||||||||||||||||||||||| | | ||||||||||||    
T  1442611 aaaattcagggacgaaattggccgatttttcaaaattcaaggactattgtgaggtattagt 1442551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 95 - 155
Target Start/End: Complemental strand, 6816926 - 6816866
Alignment:
Q  95 aaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagt 155  Q
    |||||||||||||||| ||  ||||||||| ||||||||||||||||||||||||||||||    
T  6816926 aaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagt 6816866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 95 - 155
Target Start/End: Complemental strand, 50554224 - 50554164
Alignment:
Q  95 aaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagt 155  Q
    |||||||||||||||| ||  ||||||||| ||||||||||||||||||||||||||||||    
T  50554224 aaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagt 50554164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 3011944 - 3011858
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 153  Q
    |||||||| |||||| | ||||||||| |||||||||| ||||| ||  | ||||||| |||||| |||||||||||||||||||||    
T  3011944 aaattcagagactaaatagatatttcgcaaaattcaggaacgaatttgactgattttttaaaatttaaggacgaatttgaggtatta 3011858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 76 - 156
Target Start/End: Complemental strand, 25278934 - 25278854
Alignment:
Q  76 gactaatttgatatttcgaaaaattcagggacgaaatttgcc-gatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    |||||| | ||||||||| ||||||||||||| ||||||| | ||||||| |||||||||||| ||||||||||||||||||    
T  25278934 gactaaatagatatttcgcaaaattcagggac-aaatttgactgatttttgaaaattcaaggatgaatttgaggtattagtc 25278854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 33 - 110
Target Start/End: Original strand, 36895511 - 36895588
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 110  Q
    ||||||| ||||||| ||||||||||||||||  ||||||||||||||| ||||||||||| | |||| | |||||||    
T  36895511 ttggacgaagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgatggacgaa 36895588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 119
Target Start/End: Original strand, 46638808 - 46638894
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 119  Q
    ||||||||||||||| ||||| ||||||||||  ||||||| ||||||| ||||||||||| | |||| ||||| ||| || |||||    
T  46638808 ttggacggagggacctttttggtggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggatgaagttggccga 46638894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 51122031 - 51121961
Alignment:
Q  30 cttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaatt 100  Q
    ||||||||||||||||||||||||||||||||  |  |||||||||||| || ||||||||| | ||||||    
T  51122031 cttttggacggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaatt 51121961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 23577725 - 23577636
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    |||||||  |||||||||||||||||| |||||| | || |||||||  |||||||||||  ||| ||||| |||||||| |||||||||    
T  23577725 aaattcattgactaatttgatatttcgcaaaattgaaggtcgaaattgcccgatttttcaggattgaaggatgaatttgatgtattagtc 23577636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 110
Target Start/End: Complemental strand, 27940727 - 27940654
Alignment:
Q  37 acggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 110  Q
    ||||||||||| ||||||||||||||||  ||||||| ||| ||| ||||||||||| | |||| |||||||||    
T  27940727 acggagggacctttttgatggacgtctgataaattcaaggattaaattgatatttcgcataattgagggacgaa 27940654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 110
Target Start/End: Complemental strand, 31801756 - 31801679
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 110  Q
    ||||||||||||||| |||||||||||||||   ||||| | ||||||| ||||||||||| | |||| |||||||||    
T  31801756 ttggacggagggacctttttgatggacgtctcacaaatttaaggactaagttgatatttcgcataattgagggacgaa 31801679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 96 - 156
Target Start/End: Complemental strand, 45045009 - 45044949
Alignment:
Q  96 aaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||| |   || |||||| |||||||||||||||||||||||||||||||    
T  45045009 aaattcagggacgaattggaccaattttttaaaattcaaggacgaatttgaggtattagtc 45044949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 51894656 - 51894570
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttg-ccgatttttcaaaattcaaggacgaatttgaggtatta 153  Q
    ||||||||||||||| |  |||||||| ||||||||| ||| ||||||| || |||||| |||||||||| |||||||||| ||||||    
T  51894656 aaattcagggactaaatatatatttcgcaaaattcagagac-aaatttgacccattttttaaaattcaagaacgaatttgatgtatta 51894570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 5783501 - 5783427
Alignment:
Q  19 cactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcg 93  Q
    |||||| ||| ||||||||||||||||| |  ||||||||||||    |||||||||||||| ||||||||||||    
T  5783501 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcg 5783427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 106
Target Start/End: Original strand, 18183960 - 18184017
Alignment:
Q  49 ttttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcaggga 106  Q
    ||||||||||||||||  ||||||||||||||| ||||||||||| | |||| |||||    
T  18183960 ttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgaggga 18184017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 35479976 - 35480089
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattc 132  Q
    ||||||||| ||||| ||||||||||||||||  |||||||  || ||| ||||||||||| | |||| ||||| ||| || || |||   | |||||||    
T  35479976 ttggacggaaggacctttttgatggacgtctgacaaattcatagattaagttgatatttcgcataattgagggatgaatttggctgatccgtgaaaattc 35480075  T
Q  133 aaggacgaatttga 146  Q
    ||||||||| ||||    
T  35480076 aaggacgaagttga 35480089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 45380985 - 45381058
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcaggga 106  Q
    ||||||||||| ||| ||||||||||||||||  ||||||| | ||||| ||||||||||| | |||| |||||    
T  45380985 ttggacggaggaacctttttgatggacgtctgacaaattcatgaactaagttgatatttcgcataattgaggga 45381058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 31 - 78
Target Start/End: Complemental strand, 1442646 - 1442599
Alignment:
Q  31 ttttggacggagggaccattttgatggacgtctgtaaaattcagggac 78  Q
    ||||||||||||||||   ||||||||||||||| |||||||||||||    
T  1442646 ttttggacggagggactgatttgatggacgtctgcaaaattcagggac 1442599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 37 - 146
Target Start/End: Original strand, 47269461 - 47269570
Alignment:
Q  37 acggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 136  Q
    ||||||||||| ||||||||||||| ||  |||||||||||  || |||| |||||| | |||| |||||| || || |||||    | |||||||| ||    
T  47269461 acggagggacctttttgatggacgtttgacaaattcagggatgaaattgaaatttcgtataattgagggactaatttggccgacgcgtgaaaattcaggg 47269560  T
Q  137 acgaatttga 146  Q
    ||||||||||    
T  47269561 acgaatttga 47269570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 3e-59; HSPs: 61)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 9 - 156
Target Start/End: Complemental strand, 13282625 - 13282478
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||| ||||||||||||||    
T  13282625 acatcatcaccactaacggagcttttggacggagggaccattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcagggacg 13282526  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    || || |||||||||| |||||||||||||||||||||||||||||||    
T  13282525 aatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 13282478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 12 - 156
Target Start/End: Original strand, 8609787 - 8609931
Alignment:
Q  12 tcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 111  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||     
T  8609787 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaat 8609886  T
Q  112 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    || |||||||||| |||||||||| ||||||||||||||||||||    
T  8609887 ttggccgattttttaaaattcaagaacgaatttgaggtattagtc 8609931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 12 - 156
Target Start/End: Original strand, 13108336 - 13108480
Alignment:
Q  12 tcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 111  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |     
T  13108336 tcatcaccactaacgaagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtat 13108435  T
Q  112 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    || |||||||||| |||||||||||||||||||||| ||||||||    
T  13108436 ttagccgattttttaaaattcaaggacgaatttgagttattagtc 13108480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 9 - 160
Target Start/End: Complemental strand, 27691301 - 27691150
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||| | | | ||| |||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  27691301 acatcatcactattgacggaccttttggacggagggacggatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 27691202  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtccttt 160  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27691201 aaattggccgatttttcaaaattcaaggacgaatttgaggtattagtccttt 27691150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 12 - 156
Target Start/End: Complemental strand, 38547372 - 38547228
Alignment:
Q  12 tcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 111  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |     
T  38547372 tcatcaccactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcatggacgtat 38547273  T
Q  112 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    || |||||||||| |||||||||||||||| ||||||||||||||    
T  38547272 ttggccgattttttaaaattcaaggacgaacttgaggtattagtc 38547228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 9 - 156
Target Start/End: Original strand, 41042581 - 41042728
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||||||  |||||||||||||     
T  41042581 acatcatcaccactaacggagcttttggacggagggaccattttgatggacgcctgtaaaattcagggactaaatagatatttcacaaaattcagggaca 41042680  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    || || ||| |||||| |||||||||||||| |||| |||||||||||    
T  41042681 aatttggccaattttttaaaattcaaggacggatttaaggtattagtc 41042728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 153
Target Start/End: Original strand, 26242311 - 26242455
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||| |||||| |||||||    
T  26242311 acatcatcgccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagagactaaatagatatttcgcaaaatttagggacg 26242410  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 153  Q
    || || || ||||||| |||||||||| ||||| |||||||||||    
T  26242411 aatttggctgatttttgaaaattcaagaacgaaattgaggtatta 26242455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 9 - 156
Target Start/End: Original strand, 13486096 - 13486243
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||| ||| ||||    
T  13486096 acatcatcactactaatggagcttttggacagagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaatccagagacg 13486195  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||  |  ||||||||| |||||||||| || |||||||||||||||||    
T  13486196 aatctgaccgatttttaaaaattcaagcacaaatttgaggtattagtc 13486243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 9 - 153
Target Start/End: Original strand, 41825641 - 41825785
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||| |||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||| |||||    
T  41825641 acatcatcactactaacagagcttttggacggagtgaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacg 41825740  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 153  Q
    || ||    ||||||| ||||||||||||||||||||||||||||    
T  41825741 aatttatttgatttttgaaaattcaaggacgaatttgaggtatta 41825785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 9 - 153
Target Start/End: Complemental strand, 42941921 - 42941777
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||| ||||||| |||| |||||||||||||||| |||||||||||| ||||||||||||||||||||| |  |||||||  ||||||||||||||    
T  42941921 acatcatctccactaacggagattttggacggagggactattttgatggacatctgtaaaattcagggactaaataaatatttctcaaaattcagggacg 42941822  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 153  Q
    || || || ||||||| ||||||||||||||||||||||||||||    
T  42941821 aatttggctgattttttaaaattcaaggacgaatttgaggtatta 42941777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 156
Target Start/End: Original strand, 7745109 - 7745256
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||| |||||||||| |  |||||||| ||||||||| ||||    
T  7745109 acatcatcaccactaacggagcttttggatggagggaccattttgatggatgtctgtaaaatacagggactaaataaatatttcgcaaaattcagagacg 7745208  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    || || || ||||||| ||||||||| |||||||||||| ||||||||    
T  7745209 aatttggctgatttttgaaaattcaaagacgaatttgagatattagtc 7745256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 87; E-Value: 6e-42
Query Start/End: Original strand, 9 - 163
Target Start/End: Original strand, 33708801 - 33708954
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||| | ||| ||| |||||||||||||||||   |||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||    
T  33708801 acatcatcactattaacggaccttttggacggagggacagatttgatggacgtttgtaaaattcagggactaatttaatatttcgcaaaattcagggacg 33708900  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtccttttta 163  Q
    |||||  ||| ||||| |||||||||||| |||||||||||||||||||| ||||    
T  33708901 aaattgaccg-ttttttaaaattcaaggatgaatttgaggtattagtcctattta 33708954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 601704 - 601793
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  601704 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 601793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 158
Target Start/End: Complemental strand, 22272483 - 22272332
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||||||||| |||||||||||| |||||||| |||||||||||||| ||||||||||||||||||| | |||||| || ||||||||||||||    
T  22272483 acatcatcaccactaacggagcttttggatggagggactattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcagggacg 22272384  T
Q  109 aaatttgccga--tttttcaaaattcaaggacgaatttgaggtattagtcct 158  Q
    || ||  | ||  ||||| ||||||||| |||||||||||||||||||||||    
T  22272383 aatttgactgattttttttaaaattcaaagacgaatttgaggtattagtcct 22272332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 67 - 161
Target Start/End: Original strand, 33762713 - 33762807
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcctttt 161  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  33762713 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcatttt 33762807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 29237240 - 29237151
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  29237240 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 29237151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 29239187 - 29239276
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  29239187 aaattcagggactaatttgatatttcgaaaaatttagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 29239276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 31 - 159
Target Start/End: Original strand, 27406916 - 27407044
Alignment:
Q  31 ttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaat 130  Q
    |||||||||||| |||   ||||||||||||||||||||||||||||||| ||| |||||||||| |||||| |||||||||| ||| ||||||||||||    
T  27406916 ttttggacggagagactgatttgatggacgtctgtaaaattcagggactattttaatatttcgaataattcatggacgaaattggccaatttttcaaaat 27407015  T
Q  131 tcaaggacgaatttgaggtattagtcctt 159  Q
    |||||||| | ||||||||||||||||||    
T  27407016 tcaaggactattttgaggtattagtcctt 27407044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 27692837 - 27692926
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  27692837 aaattcagggactaatttgatattttgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 27692926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 38548831 - 38548920
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  38548831 aaattcagggattaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 38548920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 67 - 155
Target Start/End: Complemental strand, 33707295 - 33707207
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagt 155  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  33707295 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagt 33707207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 67 - 164
Target Start/End: Complemental strand, 8608327 - 8608229
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaatt-cagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcctttttat 164  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  8608327 aaattcagggactaatttgatatttcgcaaaatttcagggacgaaattgaccgatttttcaaaattcaaggacgaatttaaggtattagtcctttttat 8608229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 13106893 - 13106804
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||    
T  13106893 aaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccgatttttcaaaattcaaggacgaatttaaggtattagtc 13106804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 15308261 - 15308350
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  15308261 aaattcagggactaatttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 15308350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 15488630 - 15488719
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  15488630 aaattcagggactaatttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 15488719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 33761158 - 33761069
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||    
T  33761158 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggctgatttttcaaaattcaaagacgaatttgaggtattagtc 33761069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 35509303 - 35509214
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||    
T  35509303 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggactaatttgaggtattagtc 35509214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 32 - 155
Target Start/End: Complemental strand, 5036569 - 5036446
Alignment:
Q  32 tttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaatt 131  Q
    ||||||||||| |||||||||||| ||||||||||||||||| ||||||| | ||||||||  |||||||||||||||| ||  | ||||||| ||||||    
T  5036569 tttggacggagagaccattttgatagacgtctgtaaaattcaaggactaaatagatatttcacaaaattcagggacgaatttgacggattttttaaaatt 5036470  T
Q  132 caaggacgaatttgaggtattagt 155  Q
     |||||||||||||||||||||||    
T  5036469 taaggacgaatttgaggtattagt 5036446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 31 - 138
Target Start/End: Complemental strand, 15305922 - 15305815
Alignment:
Q  31 ttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaat 130  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||  || ||||||||||||    
T  15305922 ttttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcaaataattcagggacaaaattgaccaatttttcaaaat 15305823  T
Q  131 tcaaggac 138  Q
    ||||||||    
T  15305822 tcaaggac 15305815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 31 - 138
Target Start/End: Complemental strand, 15486291 - 15486184
Alignment:
Q  31 ttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaat 130  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||  || ||||||||||||    
T  15486291 ttttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcaaataattcagggacaaaattgaccaatttttcaaaat 15486192  T
Q  131 tcaaggac 138  Q
    ||||||||    
T  15486191 tcaaggac 15486184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 9 - 143
Target Start/End: Original strand, 9673162 - 9673296
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||  ||||||||||||||    
T  9673162 acatcatcaccactaacgaagcttttagacggagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttcacaaaattcagggacg 9673261  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatt 143  Q
    || || ||  |||  | || |||||||||||||||    
T  9673262 aatttagctaattgatgaagattcaaggacgaatt 9673296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 35510819 - 35510908
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||||||||||||||  |||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  35510819 aaattcagggactaatttgatatttcacaaaattcaaggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 35510908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 13283995 - 13284081
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 153  Q
    ||||||| ||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||    
T  13283995 aaattcatggactaatttgatatttcgcaaaattcagggacaaaattggccgatttttcaaaattcaaggacgaatttgtggtatta 13284081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 42943426 - 42943515
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||| | ||||||||| |||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||    
T  42943426 aaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 42943515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 27404299 - 27404213
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 153  Q
    ||||| |||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||    
T  27404299 aaatttagggactattttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtatta 27404213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 75 - 157
Target Start/End: Original strand, 34681074 - 34681156
Alignment:
Q  75 ggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 157  Q
    ||||||| | ||||||||| |||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||||    
T  34681074 ggactaaatagatatttcgcaaaattcagggacgaatttggccgatttttgaaaattcaaggacgaatttgaggtattagtcc 34681156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 26238807 - 26238726
Alignment:
Q  75 ggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||| | ||||||||| |||||||||||||||| || || ||||||| |||||||||||||||||||||||||||||||    
T  26238807 ggactaaatagatatttcgcaaaattcagggacgaatttggctgatttttgaaaattcaaggacgaatttgaggtattagtc 26238726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 40339677 - 40339760
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttc 92  Q
    |||||||||| ||||| |||||||||||| | ||||||||||||||||||| ||||||||||||| ||||||| | ||||||||    
T  40339677 acatcatcactactaacggagcttttggatgaagggaccattttgatggacatctgtaaaattcatggactaaatagatatttc 40339760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 9184520 - 9184446
Alignment:
Q  19 cactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcg 93  Q
    |||||||| ||| |||||||||||||||||||| ||| ||||||||  |||||||||||||||||||||||||||    
T  9184520 cactaatgaagcatttggacggagggaccatttcgatcgacgtctgacaaattcagggactaatttgatatttcg 9184446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 22273891 - 22273980
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||| | ||||||| | ||||||||| ||| || || |||||||||| ||||||||||||| |||||||||||||||||    
T  22273891 aaattcagggactaaatagatattttgcaaaattcagagacaaatttggccgattttttaaaattcaaggacaaatttgaggtattagtc 22273980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 31821541 - 31821428
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattc 132  Q
    ||||||||||||||| ||||||||||||||||  |||||| |||||||| ||||||||||| | |||| ||||||||| ||  ||||  | | |||||||    
T  31821541 ttggacggagggacctttttgatggacgtctgataaattctgggactaagttgatatttcgcataattgagggacgaagttgaccgacgtgtgaaaattc 31821442  T
Q  133 aaggacgaatttga 146  Q
    | ||||||||||||    
T  31821441 agggacgaatttga 31821428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 41823971 - 41823890
Alignment:
Q  75 ggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||| | ||||||||| |||||||| |||||||||| || ||||||| ||||||||||||||||||| |||||||||||    
T  41823971 ggactaaatagatatttcgcaaaattcaaggacgaaattagctgatttttgaaaattcaaggacgaatttaaggtattagtc 41823890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 97 - 157
Target Start/End: Complemental strand, 600819 - 600759
Alignment:
Q  97 aattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 157  Q
    |||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  600819 aattcaaggacgaaattggctgatttttcaaaattcaaggacgaatttgaggtattagtcc 600759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 42897775 - 42897888
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattc 132  Q
    ||||||||||||||| ||||||||||||||||  ||||||| ||||||| ||||||||||  | |||| ||||||||| || |||||    | |||||||    
T  42897775 ttggacggagggacctttttgatggacgtctgacaaattcaaggactaagttgatatttcacataattgagggacgaatttggccgacccgtaaaaattc 42897874  T
Q  133 aaggacgaatttga 146  Q
    ||||||| ||||||    
T  42897875 aaggacggatttga 42897888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 88 - 156
Target Start/End: Complemental strand, 13484613 - 13484545
Alignment:
Q  88 atttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    |||||| |||||||||||||||| || |||||||||| ||||||||| ||||||||||||| |||||||    
T  13484613 atttcgcaaaattcagggacgaatttggccgatttttgaaaattcaatgacgaatttgaggcattagtc 13484545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 37526024 - 37526084
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcg 93  Q
    ||||||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||||    
T  37526024 ttggacggagggacctttttgatggatgtctgaaaaattcagggactaagttgatatttcg 37526084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 33750385 - 33750472
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgat 120  Q
    ||||||||||||||| |||||||| | |||||  ||||||||||||||| ||||||||||| | |||| ||||||||| || ||||||    
T  33750385 ttggacggagggacctttttgatgaatgtctgacaaattcagggactaagttgatatttcgcataattgagggacgaagttggccgat 33750472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 5038062 - 5038150
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||| | | ||||||| |||||||| | ||||| ||  ||||||||| ||||||||| |||||||||||||||||||||    
T  5038062 aaattcagggactaaatagctatttcgcaaaattcaagaacgaatttgaccgattttttaaaattcaa-gacgaatttgaggtattagtc 5038150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 32822484 - 32822371
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattc 132  Q
    ||||||||| ||||| ||||||||||| ||||  ||||||||||||||| |||||||||  || |||| ||||| ||| || ||||||   | |||||||    
T  32822484 ttggacggaaggacctttttgatggacatctgacaaattcagggactaagttgatattttaaataattgagggatgaatttggccgatccataaaaattc 32822385  T
Q  133 aaggacgaatttga 146  Q
    ||||||||| ||||    
T  32822384 aaggacgaagttga 32822371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 75 - 156
Target Start/End: Original strand, 43262145 - 43262226
Alignment:
Q  75 ggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||| | ||||||||| |||||| |||| |||| || || ||||||| |||||| ||||||||||||||||||||||||    
T  43262145 ggactaaatagatatttcgcaaaatttagggtcgaatttagctgatttttgaaaatttaaggacgaatttgaggtattagtc 43262226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 146
Target Start/End: Original strand, 28433714 - 28433830
Alignment:
Q  30 cttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaa 129  Q
    ||||||||||||||||| |  | ||||||||||    |||||||||||||| ||||||||||||  ||||| ||||||||| || ||||||  || ||||    
T  28433714 cttttggacggagggacgaaatcgatggacgtcaaacaaattcagggactattttgatatttcgttaaattgagggacgaatttggccgatccttgaaaa 28433813  T
Q  130 ttcaaggacgaatttga 146  Q
    |||| ||||||| ||||    
T  28433814 ttcagggacgaaattga 28433830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 39 - 146
Target Start/End: Original strand, 33160155 - 33160262
Alignment:
Q  39 ggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggac 138  Q
    ||||||||| ||||||||| ||||||  |||||||| |||||| ||||||||||  | |||| ||||| ||| || |||||  | | |||||||||||||    
T  33160155 ggagggacctttttgatgggcgtctgacaaattcagagactaagttgatatttcacataattgagggatgaatttggccgacctgtgaaaattcaaggac 33160254  T
Q  139 gaatttga 146  Q
    ||||||||    
T  33160255 gaatttga 33160262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 31201148 - 31201230
Alignment:
Q  37 acggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 119  Q
    ||||||||||| ||||||||||||||||  ||||||||||| ||| ||||||||||| | |||| | ||||||| || |||||    
T  31201148 acggagggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgatggacgaatttggccga 31201230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 462371 - 462484
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattc 132  Q
    ||||| ||||||| | ||||||||||||| ||  ||||||| ||||||| ||||||||||| | |||| | ||| ||| || |||||| | | |||||||    
T  462371 ttggatggagggatctttttgatggacgtttgacaaattcaaggactaagttgatatttcgcataattgacggatgaatttggccgatctgtaaaaattc 462470  T
Q  133 aaggacgaatttga 146  Q
    || |||||||||||    
T  462471 aatgacgaatttga 462484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 110
Target Start/End: Complemental strand, 11788444 - 11788367
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 110  Q
    |||||||||||||  | |||||||||||||||| ||||||  |||| ||||||||||||||| |||||  ||||||||    
T  11788444 ttggacggagggatgaatttgatggacgtctgttaaattcgaggacaaatttgatatttcgataaattaggggacgaa 11788367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 110
Target Start/End: Original strand, 40020622 - 40020713
Alignment:
Q  19 cactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 110  Q
    |||||| ||| ||||||||||||||||| |  ||||||||||||    |||||||||||||| ||||||||||||  |||||  ||||||||    
T  40020622 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaa 40020713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 156
Target Start/End: Complemental strand, 41040781 - 41040720
Alignment:
Q  95 aaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    |||||||||  ||||| || |||||||||| ||||||||| ||| |||||||||||||||||    
T  41040781 aaaattcagaaacgaatttagccgatttttaaaaattcaaagacaaatttgaggtattagtc 41040720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 91
Target Start/End: Complemental strand, 1320740 - 1320682
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatattt 91  Q
    ||||||||| ||||| | || |||||||||||  ||||||||||||||| |||||||||    
T  1320740 ttggacggaaggaccttatttatggacgtctgacaaattcagggactaagttgatattt 1320682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 37801590 - 37801541
Alignment:
Q  32 tttggacggagggaccattttgatggacgtctgtaaaattcagggactaa 81  Q
    |||||||||| |||||| |||||| ||||| ||| |||||||||||||||    
T  37801590 tttggacggaaggaccaatttgattgacgtttgttaaattcagggactaa 37801541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 38882798 - 38882911
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattc 132  Q
    ||||||||||||||  |||| |||||||||||  ||||||||||| ||| ||||||| ||| | | || | ||| ||| ||  |||||   | |||||||    
T  38882798 ttggacggagggacattttttatggacgtctgacaaattcagggattaaattgatatctcgcatagttgaaggatgaatttgaccgatccgtgaaaattc 38882897  T
Q  133 aaggacgaatttga 146  Q
    ||||||||||||||    
T  38882898 aaggacgaatttga 38882911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 8654622 - 8654582
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattca 73  Q
    ||||||||||||||| ||||||||||||||||  |||||||    
T  8654622 ttggacggagggacccttttgatggacgtctgataaattca 8654582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 116; Significance: 3e-59; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 9 - 156
Target Start/End: Original strand, 13613559 - 13613706
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  13613559 acatcatcaccactaatggaccttttggacggagggactaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 13613658  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    || ||  ||||||||||||||||||||||||||||| |||||||||||    
T  13613659 aatttgaccgatttttcaaaattcaaggacgaatttaaggtattagtc 13613706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 9 - 153
Target Start/End: Original strand, 7372935 - 7373079
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |  |||||||| ||||||||||||||    
T  7372935 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgcctgtaaaattcagggactaaataaatatttcgcaaaattcagggacg 7373034  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 153  Q
    || ||  || |||||| |||||||||  |||||||||||||||||    
T  7373035 aatttgaccaatttttaaaaattcaatcacgaatttgaggtatta 7373079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 12 - 156
Target Start/End: Original strand, 32439071 - 32439215
Alignment:
Q  12 tcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 111  Q
    ||||||| |||||  || |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||     
T  32439071 tcatcactactaacagatcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaat 32439170  T
Q  112 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||  ||||||||| ||||||||| ||| |||||||||||||||||    
T  32439171 ttgaccgattttttaaaattcaatgactaatttgaggtattagtc 32439215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 9 - 155
Target Start/End: Complemental strand, 20523513 - 20523367
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    ||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||| |||||    
T  20523513 acatcatcaccactaacagaacttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacg 20523414  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagt 155  Q
    || ||  ||||||||| ||||||| |||| |||||||| ||||||||    
T  20523413 aatttgaccgatttttgaaaattctaggaagaatttgatgtattagt 20523367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 31 - 157
Target Start/End: Original strand, 32455890 - 32456016
Alignment:
Q  31 ttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaat 130  Q
    ||||||||||||||||   ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  32455890 ttttggacggagggactgatttgatggacgtctgcaaaattcagtgactaatttgatatttcgaaaaattcagggacgaaattgaccgatttttcaaaat 32455989  T
Q  131 tcaaggacgaatttgaggtattagtcc 157  Q
    |||||||| | ||||||||||||||||    
T  32455990 tcaaggactattttgaggtattagtcc 32456016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 12 - 156
Target Start/End: Complemental strand, 32517021 - 32516877
Alignment:
Q  12 tcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 111  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||| || |||| | | ||||| | ||||||||||||||||     
T  32517021 tcatcaccactaacggagcttttggacggagggacaattttgatggacgtatgtaaaattcaagggctaaataggtattttgtaaaattcagggacgaat 32516922  T
Q  112 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||  ||||||||| |||||||||||||||||||||||||||||||    
T  32516921 ttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 32516877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 31 - 138
Target Start/End: Complemental strand, 3456873 - 3456766
Alignment:
Q  31 ttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaat 130  Q
    ||||||||||||||||   ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  3456873 ttttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaat 3456774  T
Q  131 tcaaggac 138  Q
    ||||||||    
T  3456773 tcaaggac 3456766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 9 - 152
Target Start/End: Complemental strand, 10568546 - 10568403
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |  ||||||||  ||||||| |||||    
T  10568546 acatcatcaccactaacggagcttttggacggagggactattttgatagacgtctgtaaaattcagggactaaataaatatttcgctaaattcaaggacg 10568447  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtatt 152  Q
    || ||  | ||||||| ||||||||||||||||||||| |||||    
T  10568446 aatttgactgatttttgaaaattcaaggacgaatttgatgtatt 10568403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 12 - 155
Target Start/End: Complemental strand, 11355366 - 11355223
Alignment:
Q  12 tcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 111  Q
    ||||||||||||  |||||||||||||||||||||||||||| ||| ||||||||||||||||||| | | | ||||||||  ||||||||| ||||||     
T  11355366 tcatcaccactaccggagcttttggacggagggaccattttggtggccgtctgtaaaattcagggagttaatagatatttcataaaattcagtgacgaat 11355267  T
Q  112 tttgccgatttttcaaaattcaaggacgaatttgaggtattagt 155  Q
    ||  ||||||||| ||||||||||||||||||||||||||||||    
T  11355266 ttgaccgattttttaaaattcaaggacgaatttgaggtattagt 11355223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 9 - 156
Target Start/End: Complemental strand, 6899632 - 6899485
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    ||||||||| |||||| |||||||||||||| |||||||||||||||||| |||||||||||| ||||||||| | ||||||||  |||||| || ||||    
T  6899632 acatcatcaacactaacggagcttttggacgaagggaccattttgatggatgtctgtaaaatttagggactaaatagatatttcacaaaatttagagacg 6899533  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    || ||  | ||||||| ||||||||||||| |||||||||||||||||    
T  6899532 aatttgactgatttttgaaaattcaaggacaaatttgaggtattagtc 6899485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 32518497 - 32518586
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  32518497 aaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 32518586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 3480657 - 3480746
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  3480657 aaattcagggactagtttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 3480746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 32454337 - 32454248
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  32454337 aaattcagggactaatttgatatttcgaaaaattcaaggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 32454248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 9 - 103
Target Start/End: Complemental strand, 9398807 - 9398713
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcag 103  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||| | ||||||||| |||||||||    
T  9398807 acatcatcaccactaacggaacttttggacggagggaccattttgatgaacgtctataaaattcagggactaaatagatatttcgcaaaattcag 9398713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 7049904 - 7049828
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttg 85  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7049904 acatcatcaccacgaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggacgaatttg 7049828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 9 - 141
Target Start/End: Original strand, 14338452 - 14338584
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    ||||||||| || ||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||  |||| || |||||| ||||||   |||||    
T  14338452 acatcatcatcagtaacggagcttttgaacggagggaccattttgatggacgtctgtgaaattcagggatgaattagacatttcgcaaaatttgaggacg 14338551  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaa 141  Q
    || || || ||||||| ||||||||||||||||    
T  14338552 aatttggctgatttttaaaaattcaaggacgaa 14338584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 18645104 - 18645192
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||| ||||||||||||||||||| ||||||||| |||||| | | |||||||||||||||||||||||||||||||||||||||||    
T  18645104 aaattcatggactaatttgatatttcgcaaaattcagagacgaattgt-ccgatttttcaaaattcaaggacgaatttgaggtattagtc 18645192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 13610771 - 13610690
Alignment:
Q  75 ggactaatttgatatttcgaaaaattcagggacgaaatttgc-cgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||||||| ||||||||||||| |||||||  |||||||||||||||||||||||||||| |||||||||||    
T  13610771 ggactaatttgatatttcgcaaaattcagggac-aaatttgatcgatttttcaaaattcaaggacgaatttaaggtattagtc 13610690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 9400035 - 9400124
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    |||||| |||||||||| ||||||||| |||||||| ||| ||| ||  | |||||||||||||||||||||||||||||||||||||||    
T  9400035 aaattcggggactaattagatatttcgcaaaattcaaggatgaatttgactgatttttcaaaattcaaggacgaatttgaggtattagtc 9400124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 88 - 156
Target Start/End: Complemental strand, 32437208 - 32437140
Alignment:
Q  88 atttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  32437208 atttcgcaaaattcagggacgaaattggccgatttttcaaaattcaatgacaaatttgaggtattagtc 32437140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 67 - 162
Target Start/End: Original strand, 11357194 - 11357289
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtccttttt 162  Q
    ||||||||||||||| ||| |||||   |||||||||||||||| ||  ||||||||| ||||||||||||||||||||| ||||||||| |||||    
T  11357194 aaattcagggactaaattgctatttttcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgatgtattagtctttttt 11357289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 33 - 119
Target Start/End: Original strand, 3018433 - 3018519
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 119  Q
    ||||| ||||||||| ||||||||||||||||  ||||||||||||||| ||||||||||| | |||| ||||||||| || |||||    
T  3018433 ttggatggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggacgaagttggccga 3018519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 156
Target Start/End: Complemental strand, 7371244 - 7371175
Alignment:
Q  87 tatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||| ||||||||||||| || || |||||||||| |||||||||||||||| ||||||||||||||    
T  7371244 tatttcgcaaaattcagggaccaatttggccgatttttgaaaattcaaggacgaagttgaggtattagtc 7371175  T

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Target: chr6; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 75 - 156
Target Start/End: Original strand, 10569927 - 10570008
Alignment:
Q  75 ggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||| | ||||||| | |||||||| ||||||| || || ||||||| |||||||||||||||||||||||||||||||    
T  10569927 ggactaaatagatattttgcaaaattcatggacgaatttggctgattttttaaaattcaaggacgaatttgaggtattagtc 10570008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 95 - 156
Target Start/End: Original strand, 8605353 - 8605414
Alignment:
Q  95 aaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    |||||| ||||||||| || || ||||||| |||||||||||||||||||||||||||||||    
T  8605353 aaaatttagggacgaatttggctgatttttgaaaattcaaggacgaatttgaggtattagtc 8605414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 90 - 168
Target Start/End: Original strand, 6902920 - 6902996
Alignment:
Q  90 ttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcctttttataata 168  Q
    |||| |||||| ||||||||| ||  | ||||||| |||||||||||||||||||||||||||||||  ||||||||||    
T  6902920 ttcgcaaaatttagggacgaatttgactgatttttgaaaattcaaggacgaatttgaggtattagtc--ttttataata 6902996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 165
Target Start/End: Original strand, 20525362 - 20525432
Alignment:
Q  95 aaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcctttttata 165  Q
    |||||||||||| ||| ||  || |||||| ||||||||| ||||||||||||||||||||| ||||||||    
T  20525362 aaaattcagggatgaatttgacctatttttaaaaattcaaagacgaatttgaggtattagtcgtttttata 20525432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 110
Target Start/End: Complemental strand, 2968258 - 2968185
Alignment:
Q  37 acggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 110  Q
    ||||| ||||| ||||||||||||||||  ||||||||||| ||| ||||||||||| | |||| |||||||||    
T  2968258 acggatggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgagggacgaa 2968185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 17952029 - 17952129
Alignment:
Q  19 cactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccg 118  Q
    |||||| ||| ||||||||||||||||| |  ||||||||||||    |||||||||||||| ||||||||||||  |||||  |||||||| || ||||    
T  17952029 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccg 17952128  T
Q  119 a 119  Q
    |    
T  17952129 a 17952129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 30 - 146
Target Start/End: Original strand, 35175861 - 35175977
Alignment:
Q  30 cttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaa 129  Q
    ||||||||||||||||| |  ||||||||||||    |||||||||||||| ||||||||||||  |||||  | |||||| || ||||||   | ||||    
T  35175861 cttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggagacgaatttggccgatccctgaaaa 35175960  T
Q  130 ttcaaggacgaatttga 146  Q
    |||||||||||| ||||    
T  35175961 ttcaaggacgaaattga 35175977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 4641474 - 4641392
Alignment:
Q  37 acggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 119  Q
    ||||||||||| |||||||||| |||||  ||||||||||| ||| ||||||||||  | |||| ||||||||| || |||||    
T  4641474 acggagggacctttttgatggaggtctgataaattcagggattaaattgatatttcacataattgagggacgaatttggccga 4641392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 30891261 - 30891199
Alignment:
Q  19 cactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaa 81  Q
    ||||||| |||| ||||||||||||||| | |||| ||||||||||  |||||||||||||||    
T  30891261 cactaatagagcatttggacggagggactactttgttggacgtctgacaaattcagggactaa 30891199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 152
Target Start/End: Complemental strand, 7049847 - 7049790
Alignment:
Q  95 aaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatt 152  Q
    |||||||||||||||| || || ||||||| |||||||||||| ||||||||| ||||    
T  7049847 aaaattcagggacgaatttggctgatttttgaaaattcaaggaagaatttgagatatt 7049790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 25172097 - 25172154
Alignment:
Q  20 actaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcaggga 77  Q
    ||||||||||| |||||||||| |||| ||||| |||||||| ||| |||||||||||    
T  25172097 actaatggagcatttggacggaaggactatttttatggacgtttgttaaattcaggga 25172154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 146
Target Start/End: Complemental strand, 29077447 - 29077338
Alignment:
Q  37 acggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 136  Q
    ||||||||||| ||||||||||||||||  |||||||||||  || |||| |||||| | |||| |||||| || || |||||    | |||||||| ||    
T  29077447 acggagggacctttttgatggacgtctgacaaattcagggatgaaattgaaatttcgcataattgagggactaatttggccgacgcgtgaaaattcaggg 29077348  T
Q  137 acgaatttga 146  Q
    ||||||||||    
T  29077347 acgaatttga 29077338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 118 - 153
Target Start/End: Complemental strand, 21091144 - 21091109
Alignment:
Q  118 gatttttcaaaattcaaggacgaatttgaggtatta 153  Q
    ||||||| ||||||||||||||||||||||||||||    
T  21091144 gatttttgaaaattcaaggacgaatttgaggtatta 21091109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 153
Target Start/End: Complemental strand, 21068706 - 21068628
Alignment:
Q  75 ggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 153  Q
    ||||||| | ||||||||| ||||||   ||||||| ||  | |||| || ||||||||||||||||||||||||||||    
T  21068706 ggactaaatagatatttcgtaaaatttgtggacgaatttgactgattgttgaaaattcaaggacgaatttgaggtatta 21068628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 107
Target Start/End: Complemental strand, 29112419 - 29112349
Alignment:
Q  37 acggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggac 107  Q
    ||||||||||| ||||||||||||||||  |||||||||||  || |||| |||||| | |||| ||||||    
T  29112419 acggagggacctttttgatggacgtctgacaaattcagggatgaaattgaaatttcgcataattgagggac 29112349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 162
Target Start/End: Original strand, 7051263 - 7051340
Alignment:
Q  85 gatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtccttttt 162  Q
    ||||||||| ||||||||| |||||| ||  | ||||||| |||||||||   ||||||| ||||||||||| |||||    
T  7051263 gatatttcgcaaaattcagagacgaatttgactgattttttaaaattcaaattcgaatttaaggtattagtcattttt 7051340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 11163940 - 11163875
Alignment:
Q  16 caccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaa 81  Q
    ||||||||| || || |||||||||| |||| | |||||| ||||| ||| |||||||||||||||    
T  11163940 caccactaacggtgcatttggacggaaggactaatttgattgacgtttgttaaattcagggactaa 11163875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 113; Significance: 2e-57; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 9 - 157
Target Start/End: Complemental strand, 43519571 - 43519423
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||| | ||||||| |||||||||||||||||   |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  43519571 acatcatcactattaatggaccttttggacggagggacggatttgatggacgtttgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 43519472  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 157  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  43519471 aaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcc 43519423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 9 - 153
Target Start/End: Original strand, 41761723 - 41761867
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||  ||||||    
T  41761723 acatcatcaccactaacgaagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaatttcgggacg 41761822  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 153  Q
    || || |||||||||| ||||||||||||||||||||||||||||    
T  41761823 aatttggccgatttttgaaaattcaaggacgaatttgaggtatta 41761867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 99; E-Value: 4e-49
Query Start/End: Original strand, 9 - 155
Target Start/End: Complemental strand, 49523271 - 49523125
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||||||||| |||  |||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||| |||||||| |||||    
T  49523271 acatcatcaccactaacggattttttggacggagggaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcatggacg 49523172  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagt 155  Q
    || || |||||||||| ||||||||| ||||||||||||||||||||    
T  49523171 aatttagccgattttttaaaattcaatgacgaatttgaggtattagt 49523125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 9 - 165
Target Start/End: Complemental strand, 41781686 - 41781530
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |  |||||| | |||||||||||||     
T  41781686 acatcatcatcactaacggagcttttggacggagggaccattttgatggatgtctgtaaaattcagggactaaataaatattttgcaaaattcagggac- 41781588  T
Q  109 aaatttg-ccgatttttcaaaattcaaggacgaatttgaggtattagtcctttttata 165  Q
    ||||||| ||||||||| |||||||||| || ||||||||||||||||| || |||||    
T  41781587 aaatttgaccgattttttaaaattcaagaacaaatttgaggtattagtcattattata 41781530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 12 - 156
Target Start/End: Complemental strand, 51012070 - 51011926
Alignment:
Q  12 tcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 111  Q
    ||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||| |||||||| | | |||     
T  51012070 tcatcactactaacagagcttttggacggagggaccattttgatggacgtctgtaaaattcagagactaaatagatatttcgcaaaattcaagaaagaat 51011971  T
Q  112 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||  ||||||||| |||||||||||||||||||||| ||||||||    
T  51011970 ttgaccgattttttaaaattcaaggacgaatttgagatattagtc 51011926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 67 - 157
Target Start/End: Original strand, 4173740 - 4173830
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 157  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  4173740 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcc 4173830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 43507256 - 43507167
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  43507256 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 43507167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 43508653 - 43508742
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  43508653 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 43508742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 12 - 156
Target Start/End: Original strand, 35404425 - 35404569
Alignment:
Q  12 tcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 111  Q
    ||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||| |  |||||||| |||||| | |||||||     
T  35404425 tcatcaccactaacggagcttttggacggatggaccattttgttggacgtctgtaaaattcagggattaaataaatatttcgcaaaattgaaggacgaat 35404524  T
Q  112 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    || |||||||||| |||||||||| | |||| |||||||||||||    
T  35404525 ttagccgattttttaaaattcaagtatgaatctgaggtattagtc 35404569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 9 - 157
Target Start/End: Complemental strand, 48813934 - 48813786
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    ||||||||||||| ||  ||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||| |  |||||| | ||||||||||||      
T  48813934 acatcatcaccaccaacagagcttttggacgaagggaccattttgatggacgtctataaaattcaggaactaaatatatattttgcaaaattcagggata 48813835  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 157  Q
    || || || ||||||| ||||||||||||||||||||||||||||||||    
T  48813834 aatttggctgatttttgaaaattcaaggacgaatttgaggtattagtcc 48813786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 319362 - 319273
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  319362 aaattcaggaactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 319273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 5437900 - 5437811
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  5437900 aaattcagggactattttgatatttcgaataattcagggacgaaatttgccgatttttcaaaattcaaggactattttgaggtattagtc 5437811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 67 - 157
Target Start/End: Original strand, 33266010 - 33266100
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 157  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||| ||||||||||| |||||||||    
T  33266010 aaattcagggactaatttgatatttcgcaaaattcaggaacgaaattagccgatttttcaaaattcaagaacgaatttgagatattagtcc 33266100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 833312 - 833223
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  833312 aaattcagggactattttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 833223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 5439647 - 5439736
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  5439647 aaattcagggactattttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 5439736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 33264471 - 33264382
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||| ||||||||||||||| | |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  33264471 aaattcaggaactaatttgatattttgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 33264382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 51013886 - 51013975
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||| ||||||||||| | |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  51013886 aaattcagggactcatttgatattttgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 51013975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 48646724 - 48646852
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||||||||| | |||||||||||||| |||||||||||||| | |||||||||||||||||||||| | |||||||||  ||||||| |||||    
T  48646724 acatcatcaccactaacgaagcttttggacggaaggaccattttgatgaaggtctgtaaaattcagggactaaatagatatttcgctaaattcaaggacg 48646823  T
Q  109 aaatttgccgatttttcaaaattcaagga 137  Q
    || || || || |||| ||||||||||||    
T  48646824 aatttagctgacttttgaaaattcaagga 48646852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 70 - 156
Target Start/End: Original strand, 320903 - 320989
Alignment:
Q  70 ttcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    |||| ||||||||||||||||||| |||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  320903 ttcaaggactaatttgatatttcgcaaaattcaaggatgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 320989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 9 - 107
Target Start/End: Complemental strand, 42980782 - 42980684
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggac 107  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | || |||||| |||||||| ||||    
T  42980782 acatcatcaccactaacagagcttttggacggagggaccattttgatggacgtctgtaaaattaagggactaaatagaaatttcgtaaaattcatggac 42980684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 4169775 - 4169686
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||   | ||||||||||||||||||||||||||||||||||||||    
T  4169775 aaattcagggactaatttgatatttcgcaaaattcagagacgaaattgatcaatttttcaaaattcaaggacgaatttgaggtattagtc 4169686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 37 - 156
Target Start/End: Original strand, 835012 - 835131
Alignment:
Q  37 acggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 136  Q
    |||||||||| | |||||| ||||| |   |||||||||||||| |||||||||||||| ||||||||||| ||||| | ||||||||||||||||||||    
T  835012 acggagggactaatttgattgacgttttgtaaattcagggactattttgatatttcgaataattcagggacaaaattggtcgatttttcaaaattcaagg 835111  T
Q  137 acgaatttgaggtattagtc 156  Q
    || | |||||||||||||||    
T  835112 actattttgaggtattagtc 835131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 35401838 - 35401749
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||| ||||||| | ||||||||  |||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||    
T  35401838 aaattcaaggactaaatagatatttcacaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 35401749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 9 - 153
Target Start/End: Complemental strand, 11601817 - 11601674
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||| || |||||| | ||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||| | |||||| | ||||||  ||||      
T  11601817 acatcagcatcactaacgaagcttgtggacagagggactattttgatggacgtctgtaaaattcagggactaatat-atattttgcaaaatttgggga-t 11601720  T
Q  109 aaatttg-ccgatttttcaaaattcaaggacgaatttgaggtatta 153  Q
    ||||||| | ||||||| |||||||||| |||||||| ||||||||    
T  11601719 aaatttgactgatttttgaaaattcaagaacgaattttaggtatta 11601674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 49524733 - 49524822
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||| | | ||||| | |||||||||||||||| ||  ||||||||| |||||||||||||||||||||||||||||||    
T  49524733 aaattcagggactaaatagctattttgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 49524822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 52868129 - 52868254
Alignment:
Q  12 tcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 111  Q
    ||||| ||||||| |||||||||||||| || |||||||||||| | ||||||| |||||||| |||||| | ||||||||| |||||| |  ||||||     
T  52868129 tcatcgccactaacggagcttttggacgaagtgaccattttgataggcgtctgttaaattcagagactaaatagatatttcgcaaaatttatagacgaat 52868228  T
Q  112 tttgccgatttttcaaaattcaagga 137  Q
    ||  ||||||||| ||||||||||||    
T  52868229 ttgaccgattttttaaaattcaagga 52868254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 9 - 153
Target Start/End: Original strand, 2693230 - 2693373
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    ||||||||| |||||||||| ||| |||||||| ||||||||||||||||| | | |||||||||  |||||| | ||||||||| |||||| ||| |      
T  2693230 acatcatcatcactaatggaacttatggacggatggaccattttgatggacat-tttaaaattcaaagactaaatagatatttcgcaaaatttaggaata 2693328  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 153  Q
    || || || ||||||| ||||||||| |||||| |||||||||||    
T  2693329 aatttggctgattttttaaaattcaaagacgaagttgaggtatta 2693373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 67 - 146
Target Start/End: Complemental strand, 39345653 - 39345574
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 146  Q
    ||||||||||||||| | | ||||||| |||||||||||||||| || |||||||||| |||||||||||||||||||||    
T  39345653 aaattcagggactaaatagctatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttga 39345574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 67 - 151
Target Start/End: Original strand, 43521109 - 43521193
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtat 151  Q
    ||||||||||||||||||||||||||| ||||||||   ||||||||  | |||||||||||||||||| || ||||||||||||    
T  43521109 aaattcagggactaatttgatatttcgcaaaattcaaaaacgaaattgactgatttttcaaaattcaagaacaaatttgaggtat 43521193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 20493916 - 20493827
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||| ||||| | ||||||||| |||||||| | ||||| || |||||| ||| ||||||||| |||||||||||||||||||||    
T  20493916 aaattcaggaactaaatagatatttcgcaaaattcaagaacgaatttggccgatattttaaaattcaatgacgaatttgaggtattagtc 20493827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 44558494 - 44558607
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattc 132  Q
    ||||||||| ||||| ||||||||||||||||  ||||||||||||||| ||||||||||| | |||| ||||| ||| || |||||    | |||||||    
T  44558494 ttggacggaaggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggccgacccgtgaaaattc 44558593  T
Q  133 aaggacgaatttga 146  Q
    ||||||||| ||||    
T  44558594 aaggacgaagttga 44558607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 48645336 - 48645255
Alignment:
Q  75 ggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||| | ||||||||| |||||||| ||||||| ||  | ||||||| |||||||||||||||||||||||||||||||    
T  48645336 ggactaaatagatatttcgcaaaattcatggacgaatttgactgatttttgaaaattcaaggacgaatttgaggtattagtc 48645255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 27 - 110
Target Start/End: Original strand, 13450975 - 13451058
Alignment:
Q  27 gagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 110  Q
    |||| |||||| ||||||||||||||||||||||||||  ||||||| |||||| ||||||||||||  |||||  ||||||||    
T  13450975 gagcatttggatggagggaccattttgatggacgtctgataaattcaaggactattttgatatttcgttaaattgggggacgaa 13451058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 33 - 110
Target Start/End: Complemental strand, 35996186 - 35996109
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 110  Q
    ||||||||||||||| ||||||||||||||||  ||||||||||| ||| ||||||||| | | |||| |||||||||    
T  35996186 ttggacggagggacctttttgatggacgtctgataaattcagggattaaattgatattttgcacaattgagggacgaa 35996109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 37 - 110
Target Start/End: Original strand, 44794765 - 44794838
Alignment:
Q  37 acggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 110  Q
    ||||||||||| ||||||||||||||||  ||||||||||| ||| ||||||||||| | |||| |||||||||    
T  44794765 acggagggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgagggacgaa 44794838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 39083776 - 39083676
Alignment:
Q  19 cactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccg 118  Q
    |||||| ||| ||||||||||||||||| |  ||||||||||||    |||||||||||||| ||||||||||||  ||||| ||||||||| || ||||    
T  39083776 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccg 39083677  T
Q  119 a 119  Q
    |    
T  39083676 a 39083676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 2827527 - 2827468
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttc 92  Q
    ||||||||||||||| ||||||||||||||||  ||||||| ||||||| ||||||||||    
T  2827527 ttggacggagggacctttttgatggacgtctgacaaattcaaggactaagttgatatttc 2827468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 87 - 162
Target Start/End: Complemental strand, 11254188 - 11254113
Alignment:
Q  87 tatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtccttttt 162  Q
    ||||||| |||||| || |||| | || |||||||||| ||||||||||||||||||||||||||| ||| |||||    
T  11254188 tatttcgcaaaatttagagacggatttggccgatttttaaaaattcaaggacgaatttgaggtatttgtcattttt 11254113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 146
Target Start/End: Original strand, 10372711 - 10372820
Alignment:
Q  37 acggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 136  Q
    ||||||||||| ||||||||||||||||  |||||||||||  || ||||||||||| | |||| |||||| || || |||||    | |||||||| ||    
T  10372711 acggagggacctttttgatggacgtctgacaaattcagggatgaaattgatatttcgcataattgagggactaatttggccgacgcgtgaaaattcaggg 10372810  T
Q  137 acgaatttga 146  Q
    ||||||||||    
T  10372811 acgaatttga 10372820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 110
Target Start/End: Complemental strand, 47941930 - 47941857
Alignment:
Q  37 acggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 110  Q
    ||||||||||| ||||||||||||||||  ||||||||||| ||| ||||||||||| | |||| || ||||||    
T  47941930 acggagggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgagagacgaa 47941857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 5484677 - 5484577
Alignment:
Q  19 cactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccg 118  Q
    |||||| ||| ||||||||||||||||| |  ||||||||||||    |||||||||||||| ||||||||||||  |||||  |||||||| || ||||    
T  5484677 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccg 5484578  T
Q  119 a 119  Q
    |    
T  5484577 a 5484577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 39921631 - 39921531
Alignment:
Q  19 cactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccg 118  Q
    |||||| ||| ||||||||||||||||| |  ||||||||||||    |||||||||||||| ||||||||||||  |||||  |||||||| || ||||    
T  39921631 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccg 39921532  T
Q  119 a 119  Q
    |    
T  39921531 a 39921531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 43779854 - 43779954
Alignment:
Q  19 cactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccg 118  Q
    |||||| ||| ||||||||||||||||| |  ||||||||||||    |||||||||||||| ||||||||||||  |||||  |||||||| || ||||    
T  43779854 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccg 43779953  T
Q  119 a 119  Q
    |    
T  43779954 a 43779954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 146
Target Start/End: Complemental strand, 10762700 - 10762591
Alignment:
Q  37 acggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaagg 136  Q
    ||||||||||| ||||||||||||||||  |||||||||||  || |||| |||||| | |||| |||||| || || |||||    | |||||||| ||    
T  10762700 acggagggacctttttgatggacgtctgacaaattcagggatgaaattgaaatttcgcataattgagggactaatttggccgacgcgtgaaaattcaggg 10762601  T
Q  137 acgaatttga 146  Q
    ||||||||||    
T  10762600 acgaatttga 10762591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 27624918 - 27624869
Alignment:
Q  44 gaccattttgatggacgtctgtaaaattcagggactaatttgatatttcg 93  Q
    |||| ||||||||||||||||  ||||||||||||||| |||||||||||    
T  27624918 gacctttttgatggacgtctgacaaattcagggactaagttgatatttcg 27624869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 39189508 - 39189419
Alignment:
Q  30 cttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 119  Q
    ||||||||||||||||| |  ||||||||||||    |||||||||||||| ||||||||||||  |||||  |||||||| || |||||    
T  39189508 cttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccga 39189419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 2691463 - 2691368
Alignment:
Q  66 aaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtccttttt 162  Q
    |||||||||||||||| | ||||||| | ||||||   ||||||| || || ||||||| ||||||||| || ||| ||||||||||| ||||||||    
T  2691463 aaaattcagggactaaatagatattttgcaaaatttgtggacgaatttggctgatttttgaaaattcaa-gatgaagttgaggtattattccttttt 2691368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 32652236 - 32652136
Alignment:
Q  19 cactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccg 118  Q
    |||||| ||| ||||||||||||||||| |  ||||||||||||    ||||||| |||||| ||||||||||||  |||||  |||||||| || ||||    
T  32652236 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcaaggactattttgatatttcgttaaattgggggacgaatttggccg 32652137  T
Q  119 a 119  Q
    |    
T  32652136 a 32652136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 44994274 - 44994374
Alignment:
Q  19 cactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccg 118  Q
    |||||| ||| |||||||| |||||||| |  ||||||||||||    |||||||||||||| ||||||||||||  |||||  |||||||| || ||||    
T  44994274 cactaacggaccttttggatggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccg 44994373  T
Q  119 a 119  Q
    |    
T  44994374 a 44994374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 44972548 - 44972489
Alignment:
Q  19 cactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggac 78  Q
    |||||| ||||| |||||||||| |||| |||||||||||||| ||| ||||| ||||||    
T  44972548 cactaacggagcatttggacggaaggactattttgatggacgtttgttaaatttagggac 44972489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 50131299 - 50131240
Alignment:
Q  19 cactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggac 78  Q
    ||||| |||||| ||||||||||  ||| |||||||||||||| ||| ||||||||||||    
T  50131299 cactactggagcatttggacggaatgactattttgatggacgtttgtcaaattcagggac 50131240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 2350508 - 2350582
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggac 107  Q
    |||||| |||||||| |||||||| |||||||  |||||||| || ||| ||||||||||| | |||| ||||||    
T  2350508 ttggacagagggacctttttgatgaacgtctgataaattcagagattaaattgatatttcgcataattgagggac 2350582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 155
Target Start/End: Complemental strand, 20820075 - 20819986
Alignment:
Q  66 aaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgcc-gatttttcaaaattcaaggacgaatttgaggtattagt 155  Q
    |||||||||||||||| |  |||||| | |||||| ||| |  ||||||| | ||||||| |||||||||||||||| |||||||||||||    
T  20820075 aaaattcagggactaaataaatattttgcaaaatttaggaat-aaatttgactgatttttgaaaattcaaggacgaagttgaggtattagt 20819986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 42982472 - 42982541
Alignment:
Q  87 tatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||| |||||||||||||||| ||  | ||||||| ||||||||||||  ||||| | |||||||||    
T  42982472 tatttcgcaaaattcagggacgaatttgacagatttttaaaaattcaaggaaaaatttaacgtattagtc 42982541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 51041932 - 51042044
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattc 132  Q
    ||||| ||||||||| |||||||| |||||||  ||||||| ||||||| ||||||||||  | |||| ||||| ||| ||  ||||  | | ||||||     
T  51041932 ttggatggagggacctttttgatg-acgtctgacaaattcatggactaagttgatatttcacataattgagggatgaatttgaccgacctgtaaaaattt 51042030  T
Q  133 aaggacgaatttga 146  Q
    ||||||||||||||    
T  51042031 aaggacgaatttga 51042044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 112; Significance: 8e-57; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 9 - 156
Target Start/End: Complemental strand, 3441 - 3294
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||| | ||| ||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||     
T  3441 acatcatcactattaacggaccttttggacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggaca 3342  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3341 aaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 3294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 9 - 156
Target Start/End: Complemental strand, 4613 - 4466
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||| | ||| ||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||     
T  4613 acatcatcactattaacggaccttttggacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggaca 4514  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  4513 aaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 4466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 14343 - 14432
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14343 aaattcagggactaatttgatatttcgcaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 14432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 105; Significance: 1e-52; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 12 - 156
Target Start/End: Original strand, 39859209 - 39859353
Alignment:
Q  12 tcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 111  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| | ||||||||| ||||||||||||| ||     
T  39859209 tcatcaccactaacggagcttttggacggagggaccattttgacggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggactaat 39859308  T
Q  112 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    || |||||||||| |||||||||||||||||||||||||||||||    
T  39859309 ttggccgattttttaaaattcaaggacgaatttgaggtattagtc 39859353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 9 - 156
Target Start/End: Complemental strand, 56477 - 56330
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||| |||||  ||  |||||||||||||||     ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  56477 acatcatcactactaacagacattttggacggagggagtgaattgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 56378  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  56377 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 56330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 9 - 156
Target Start/End: Original strand, 27666042 - 27666189
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||| | ||| ||  |||||||||||||||||   |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  27666042 acatcatcactattaacgggccttttggacggagggacggatttgatggacgtttgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 27666141  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  27666142 aaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 27666189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 9 - 163
Target Start/End: Original strand, 24228386 - 24228540
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| | ||||||||| ||||||||||||||    
T  24228386 acatcatcaccactaatggagcttttggacgaagggaccattttgatggacgtctgtaaaattcagagactaaatagatatttcgcaaaattcagggacg 24228485  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtccttttta 163  Q
    || || ||| |||||| |||||||||| ||||| ||||||||||| || ||||||    
T  24228486 aatttggccaattttttaaaattcaagaacgaaattgaggtattaatcattttta 24228540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 99; E-Value: 4e-49
Query Start/End: Original strand, 12 - 162
Target Start/End: Original strand, 29996494 - 29996644
Alignment:
Q  12 tcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 111  Q
    ||||||| | ||| ||| |||||||| |||||||| | |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||    
T  29996494 tcatcactattaacggaccttttggatggagggacgaatttgatggacgtctgtaaaattcagggattaatttgatatttcgcaaaattcagggacaaaa 29996593  T
Q  112 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtccttttt 162  Q
    ||  ||||||||||||||||||||||||||||||||||||||||| |||||    
T  29996594 ttgaccgatttttcaaaattcaaggacgaatttgaggtattagtcgttttt 29996644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 157
Target Start/End: Complemental strand, 6602479 - 6602334
Alignment:
Q  12 tcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 111  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||  |      
T  6602479 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggataagt 6602380  T
Q  112 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 157  Q
    || |||||||||| ||||||||||| |||||||||| |||||||||    
T  6602379 ttagccgattttttaaaattcaaggtcgaatttgagttattagtcc 6602334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 9 - 156
Target Start/End: Complemental strand, 20478189 - 20478042
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||| | ||| |||  ||||||||||||||||   ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  20478189 acatcatcactattaacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcaggtacg 20478090  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||| |||||||||||||||||||||||| | |||||||||||||||    
T  20478089 aaattggccgatttttcaaaattcaaggactattttgaggtattagtc 20478042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 9 - 156
Target Start/End: Original strand, 37115503 - 37115650
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| | ||||||| | |||||||||| |||    
T  37115503 acatcatcaccactaacggagcttttggacggagggactattttgatggacgtctgtaaaattcaggtactaaatagatattttgcaaaattcaggaacg 37115602  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    || ||  | ||||||| ||||||||| |||||||||||||||||||||    
T  37115603 aatttgactgattttttaaaattcaatgacgaatttgaggtattagtc 37115650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 9 - 156
Target Start/End: Original strand, 38474120 - 38474267
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||| | ||||||||||||||| ||||||| | ||||||||| ||||||||||||||    
T  38474120 acatcatcaccactaacggagcttttggacggatggaccattttgataggcgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggacg 38474219  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    || ||  ||||||||| ||||||| ||||| |||||||||||||||||    
T  38474220 aatttgaccgatttttaaaaattcgaggactaatttgaggtattagtc 38474267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 9 - 157
Target Start/End: Original strand, 30940402 - 30940550
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||| | ||||||||| |||||| || ||||    
T  30940402 acatcatcaccactaacggagcttttggacggagagaccattttgatgaacgtttgtaaaattcagggactaaatagatatttcgtaaaattaagagacg 30940501  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 157  Q
    || || |||||||||| |||||||||| || ||||| ||||||||||||    
T  30940502 aatttggccgattttttaaaattcaagaacaaatttaaggtattagtcc 30940550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 12 - 153
Target Start/End: Original strand, 34776895 - 34777036
Alignment:
Q  12 tcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 111  Q
    |||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||| | |||     
T  34776895 tcatcatcactaacggagtttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaggaatgaat 34776994  T
Q  112 tttgccgatttttcaaaattcaaggacgaatttgaggtatta 153  Q
    || ||| |||||| |||||| ||| |||||||||||||||||    
T  34776995 ttggccaattttttaaaatttaagaacgaatttgaggtatta 34777036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 12 - 157
Target Start/End: Complemental strand, 45359480 - 45359335
Alignment:
Q  12 tcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 111  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| | ||||||||| |||||||| ||||| |     
T  45359480 tcatcaccactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcaaggacggat 45359381  T
Q  112 tttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 157  Q
    ||  ||||||||| |||||||| |||| ||||| ||||||||||||    
T  45359380 ttgaccgattttttaaaattcatggacaaatttaaggtattagtcc 45359335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 9 - 156
Target Start/End: Original strand, 47386186 - 47386333
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacg 108  Q
    |||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||| || |||||| |  |||||||| |||||||| |||||    
T  47386186 acatcatcaccactaacggagcttttggacggaatgaccattttgatggacgtctgtaaaatttagagactaaataaatatttcgcaaaattcaaggacg 47386285  T
Q  109 aaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    || ||  | ||||||| |||||| ||||||||||||||||||||||||    
T  47386286 aatttgactgattttttaaaattaaaggacgaatttgaggtattagtc 47386333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 20479719 - 20479808
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  20479719 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 20479808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 35402058 - 35401969
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  35402058 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattagccgatttttcaaaattcaaggacgaatttgagatattagtc 35401969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 35403619 - 35403708
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  35403619 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgattttttaaaattcaaggacgaatttgaggtattagtc 35403708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 12 - 134
Target Start/End: Complemental strand, 13168267 - 13168142
Alignment:
Q  12 tcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattc---agggactaatttgatatttcgaaaaattcagggacg 108  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||   ||||||||| | ||||||||| |||||||| |||||    
T  13168267 tcatcaccactaacggagcttttggacggatggaccattttgatggacgtctgtaaaattcaggagggactaaatagatatttcgcaaaattcaaggacg 13168168  T
Q  109 aaatttgccgatttttcaaaattcaa 134  Q
    || || |||||||||| |||||||||    
T  13168167 aatttggccgattttttaaaattcaa 13168142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 21 - 153
Target Start/End: Original strand, 37796170 - 37796302
Alignment:
Q  21 ctaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgat 120  Q
    |||| ||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||| | ||||||||| ||||||   ||||||| || || |||    
T  37796170 ctaacggagcttatggacggagggactattttgatggacgtccgtaaaattcagggactaaatagatatttcgcaaaatttgaggacgaatttggctgat 37796269  T
Q  121 ttttcaaaattcaaggacgaatttgaggtatta 153  Q
    |||| ||||||||||||| ||||||||||||||    
T  37796270 ttttgaaaattcaaggacaaatttgaggtatta 37796302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 67 - 157
Target Start/End: Original strand, 78014 - 78104
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 157  Q
    |||||||||||| |||||||||||| | ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  78014 aaattcagggacaaatttgatattttgcaaaattcagggacgaaattggccgatttttcaaaattcaaagacgaatttgaggtattagtcc 78104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 27664519 - 27664433
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 153  Q
    ||||||||||||||||||||||||| | ||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||    
T  27664519 aaattcagggactaatttgatattttgcaaaattcagggacaaaattggccgatttttcaaaattcaaggactaatttgaggtatta 27664433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 13169683 - 13169772
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||| | ||||||||| ||||||||||||| || || |||||||||| |||||||||||||||||||||||||||||||    
T  13169683 aaattcagggactaaatagatatttcgcaaaattcagggacaaatttggccgatttttgaaaattcaaggacgaatttgaggtattagtc 13169772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 9 - 110
Target Start/End: Original strand, 35693347 - 35693450
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatt--tgatatttcgaaaaattcaggga 106  Q
    ||||||||||||||||  || |||||||| |||||||||||||||||||||||||||||||||||||||||||||   |||||| || |||||||| |||    
T  35693347 acatcatcaccactaacagaacttttggatggagggaccattttgatggacgtctgtaaaattcagggactaattagagatattccgcaaaattcaagga 35693446  T
Q  107 cgaa 110  Q
    ||||    
T  35693447 cgaa 35693450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 47384383 - 47384294
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    |||||| |||||||||| ||||||||| |||||||| ||||||| || ||  ||||||||||||||||||||||||||||||||||||||    
T  47384383 aaattcggggactaattagatatttcgcaaaattcaaggacgaatttggctcatttttcaaaattcaaggacgaatttgaggtattagtc 47384294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 96 - 155
Target Start/End: Complemental strand, 29994966 - 29994907
Alignment:
Q  96 aaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagt 155  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  29994966 aaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagt 29994907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 39857734 - 39857648
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 153  Q
    |||||| |||||||| | ||||||||| |||||||||||||||| ||  ||||||||| ||||||||||||||||||||||||||||    
T  39857734 aaattctgggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtatta 39857648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 33038798 - 33038911
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattc 132  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||| | |||| ||||| ||| ||  ||||    | |||||||    
T  33038798 ttggacggagggacctttttgatggacgtctgaaaaattcagggactaagttgatatttcgcataattgagggatgaatttgaccgacccataaaaattc 33038897  T
Q  133 aaggacgaatttga 146  Q
    ||||||||||||||    
T  33038898 aaggacgaatttga 33038911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 48852324 - 48852415
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaatt 100  Q
    ||||||||||||||||  |||||||||||| ||| |||||||||||||||||||||||||||||| ||| ||| | ||||||| | ||||||    
T  48852324 acatcatcaccactaacagagcttttggaccgagagaccattttgatggacgtctgtaaaattcaaggattaaatagatattttgcaaaatt 48852415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 67 - 161
Target Start/End: Complemental strand, 37114030 - 37113936
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcctttt 161  Q
    ||||| ||||||||| | ||||||||| |||||||||||| ||| ||  || |||||| ||||||||||||||||||||||||||||||| ||||    
T  37114030 aaatttagggactaaatagatatttcgcaaaattcagggatgaatttgaccaattttttaaaattcaaggacgaatttgaggtattagtcttttt 37113936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 23906241 - 23906314
Alignment:
Q  12 tcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttg 85  Q
    ||||| ||| ||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||    
T  23906241 tcatcgccattaacggagcttttggacggagggaccattttgatggacgactgtaaaatttagggacgaatttg 23906314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 46996703 - 46996816
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattc 132  Q
    ||||||||||||||| ||||||||||||||||  |||||||| |||||| ||||||||||| | |||| ||||||||| || |||||    | |||||||    
T  46996703 ttggacggagggacctttttgatggacgtctgacaaattcagtgactaagttgatatttcgcataattgagggacgaagttggccgacgcgtgaaaattc 46996802  T
Q  133 aaggacgaatttga 146  Q
    | ||||||||||||    
T  46996803 agggacgaatttga 46996816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 87 - 155
Target Start/End: Complemental strand, 24226650 - 24226582
Alignment:
Q  87 tatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagt 155  Q
    ||||||| |||||||| ||||||| || |||||||||| ||||||||||||||||||||||||||||||    
T  24226650 tatttcgcaaaattcaaggacgaatttggccgatttttgaaaattcaaggacgaatttgaggtattagt 24226582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 67 - 157
Target Start/End: Complemental strand, 23904672 - 23904582
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 157  Q
    ||||||| ||||||| | | ||||| | ||||||||| |||||| ||  ||||||||| ||||||||||||||||||||||||||||||||    
T  23904672 aaattcatggactaaatagctattttgcaaaattcagagacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtcc 23904582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 106
Target Start/End: Complemental strand, 2167614 - 2167529
Alignment:
Q  21 ctaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcaggga 106  Q
    ||||||||||  ||||||||||||||| ||||||||| ||||||  ||||||||||||||| ||||||||||| | |||| |||||    
T  2167614 ctaatggagcacttggacggagggacctttttgatgggcgtctgacaaattcagggactaagttgatatttcgcataattgaggga 2167529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 85 - 157
Target Start/End: Complemental strand, 38549618 - 38549546
Alignment:
Q  85 gatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 157  Q
    ||||||||  |||||||||||||||| || || ||||||| ||||||||||||||||||| ||||||||||||    
T  38549618 gatatttcacaaaattcagggacgaacttggctgatttttgaaaattcaaggacgaatttaaggtattagtcc 38549546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 6605397 - 6605483
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttg-ccgatttttcaaaattcaaggacgaatttgaggtatta 153  Q
    ||||||||||||||| | | ||||||| |||||||||| || ||||||| ||||||||| ||||||||||||| ||||||||||||||    
T  6605397 aaattcagggactaaatagctatttcgcaaaattcaggaac-aaatttgaccgattttttaaaattcaaggacaaatttgaggtatta 6605483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 13018158 - 13018036
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttg--atatttcgaaaaattcagggacgaaatttgccgatttttcaaaat 130  Q
    ||||||||||||||||||||||||||||| ||| |||||||| ||  || | |  ||||||||  |||||   ||||||| || || ||||||| |||||    
T  13018158 ttggacggagggaccattttgatggacgtatgttaaattcagagatgaaatagatatatttcgctaaatttgaggacgaatttggctgattttttaaaat 13018059  T
Q  131 tcaaggacgaatttgaggtatta 153  Q
    ||||||| |||||||||||||||    
T  13018058 tcaaggatgaatttgaggtatta 13018036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 366821 - 366747
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggac 107  Q
    |||||||||||||  | |||||| ||||||||| |||||||||||||||||||||||||| ||||| | ||||||    
T  366821 ttggacggagggatgaatttgatagacgtctgttaaattcagggactaatttgatatttcaaaaaactgagggac 366747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 23906295 - 23906357
Alignment:
Q  95 aaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcc 157  Q
    |||||| ||||||||| || |||||||||| |||||||||||| |||||||||||||||||||    
T  23906295 aaaatttagggacgaatttggccgattttttaaaattcaaggaggaatttgaggtattagtcc 23906357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 146
Target Start/End: Complemental strand, 27955506 - 27955380
Alignment:
Q  20 actaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 119  Q
    ||||| |||||  |||||||||||||||  |||||||||||||||  ||||||||  | ||| ||||||||||| |||||| ||||| ||| || || ||    
T  27955506 actaacggagcacttggacggagggacctctttgatggacgtctgacaaattcagaaattaagttgatatttcgtaaaattgagggatgaatttagctga 27955407  T
Q  120 tttttcaaaattcaaggacgaatttga 146  Q
    |   | |||||||||||||||||||||    
T  27955406 tccgtaaaaattcaaggacgaatttga 27955380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 48227941 - 48228027
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 153  Q
    |||||||||||| || | ||||||||| ||||||||  |||||| ||  ||||||||| ||||||||| ||||||||||||||||||    
T  48227941 aaattcagggacaaaatagatatttcgcaaaattcaaagacgaatttgaccgattttttaaaattcaaagacgaatttgaggtatta 48228027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 22155847 - 22155936
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    |||||||||||| || | | ||||| | |||||||| ||||||| || |||||||||| |||||||||||||||| || |||||||||||    
T  22155847 aaattcagggacaaaatagctattttgcaaaattcatggacgaatttggccgatttttgaaaattcaaggacgaagtttaggtattagtc 22155936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 22211762 - 22211851
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    |||||||||||| || | | ||||| | |||||||| ||||||| || |||||||||| |||||||||||||||| || |||||||||||    
T  22211762 aaattcagggacaaaatagctattttgcaaaattcatggacgaatttggccgatttttgaaaattcaaggacgaagtttaggtattagtc 22211851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 23953928 - 23953815
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattc 132  Q
    ||||||||||||||| ||||||| ||||||||  ||||||| ||||||| ||||||||||| | |||| | ||||||| ||| ||||    | ||||||     
T  23953928 ttggacggagggacctttttgattgacgtctgacaaattcacggactaagttgatatttcgcataattgatggacgaattttaccgacccgtaaaaattt 23953829  T
Q  133 aaggacgaatttga 146  Q
    ||||||||||||||    
T  23953828 aaggacgaatttga 23953815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 156
Target Start/End: Complemental strand, 46437176 - 46437107
Alignment:
Q  87 tatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||| ||||||||  |||||| || || ||||||| |||||||||||||||||||||||||||||||    
T  46437176 tatttcgcaaaattcaacgacgaatttggctgatttttgaaaattcaaggacgaatttgaggtattagtc 46437107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 45463807 - 45463707
Alignment:
Q  19 cactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccg 118  Q
    |||||| ||| ||||||||||||||||| |  ||||||||||||    |||||||||||||| ||||||||||||  ||||| ||||||||| || ||||    
T  45463807 cactaacggaccttttggacggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccg 45463708  T
Q  119 a 119  Q
    |    
T  45463707 a 45463707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 7401999 - 7401949
Alignment:
Q  50 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaatt 100  Q
    |||||||||||||||| |||||||||||| ||||||||||||||| |||||    
T  7401999 tttgatggacgtctgttaaattcagggacgaatttgatatttcgataaatt 7401949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 1546424 - 1546343
Alignment:
Q  19 cactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaatt 100  Q
    |||||| ||| ||||||||||||||||||||||||||||||||  |  ||||||| ||||  | ||||||||||| ||||||    
T  1546424 cactaacggaccttttggacggagggaccattttgatggacgtgagagaaattcaaggacgcaattgatatttcgcaaaatt 1546343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 110
Target Start/End: Original strand, 35344295 - 35344368
Alignment:
Q  37 acggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaa 110  Q
    ||||||||||| |||||||||||||||   ||||||||||| ||| ||||||||||| | |||| |||||||||    
T  35344295 acggagggacctttttgatggacgtcttataaattcagggattaaattgatatttcgcataattgagggacgaa 35344368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 152
Target Start/End: Complemental strand, 35691496 - 35691431
Alignment:
Q  87 tatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatt 152  Q
    ||||||| |||||| || |||||| ||  ||||||||| |||||||||||||||||||||||||||    
T  35691496 tatttcgcaaaatttagagacgaatttgaccgatttttgaaaattcaaggacgaatttgaggtatt 35691431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 47341687 - 47341800
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattc 132  Q
    ||||||||||  ||| |||||||  |||||||  ||||||||||||||| ||||||||||| | |||| ||||| ||| || |||||    | |||||||    
T  47341687 ttggacggagatacctttttgattaacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggccgacccgtgaaaattc 47341786  T
Q  133 aaggacgaatttga 146  Q
    ||||||||||||||    
T  47341787 aaggacgaatttga 47341800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 19712264 - 19712323
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttc 92  Q
    |||||||| ||||||||||||||||||||||   |||||||| ||||||| |||||||||    
T  19712264 ttggacggtgggaccattttgatggacgtctaataaattcagagactaatgtgatatttc 19712323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 37 - 107
Target Start/End: Original strand, 8423286 - 8423356
Alignment:
Q  37 acggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggac 107  Q
    ||||||||||| ||||||| ||||||||  ||||||||||| ||| ||||||||||| | |||| ||||||    
T  8423286 acggagggacctttttgattgacgtctgataaattcagggattaaattgatatttcgcataattgagggac 8423356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 147
Target Start/End: Original strand, 13039641 - 13039722
Alignment:
Q  66 aaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgag 147  Q
    |||||||||||||||| | | ||||||| |||||| ||||||||| ||    ||||||| |||||||||||||||| |||||    
T  13039641 aaaattcagggactaaatagttatttcgcaaaatttagggacgaatttgattgatttttgaaaattcaaggacgaacttgag 13039722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 34775087 - 34774998
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||| | | ||||| | |||||||| | | ||| ||  ||||||||| ||||||||| |||||||||||| ||||||||    
T  34775087 aaattcagggactaaatagctattttgcaaaattcatgaatgaatttgaccgattttttaaaattcaaagacgaatttgagatattagtc 34774998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 146
Target Start/End: Original strand, 38613498 - 38613595
Alignment:
Q  49 ttttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 146  Q
    |||| |||||||||||  ||||||||||||||| ||||||||||| | |||| ||||| ||| || |||||    | |||||| ||||||||||||||    
T  38613498 tttttatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggccgacccgtgaaaattgaaggacgaatttga 38613595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 40784470 - 40784409
Alignment:
Q  32 tttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcg 93  Q
    |||||||||||||||| |||||||||| |||||  |||||||  |||||| |||||||||||    
T  40784470 tttggacggagggacctttttgatggatgtctgacaaattcaaagactaagttgatatttcg 40784409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 156
Target Start/End: Original strand, 45361304 - 45361365
Alignment:
Q  95 aaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    |||||||||| || |||||  || |||||| |||||||||||| ||||||||||||||||||    
T  45361304 aaaattcaggaacaaaattgacccattttttaaaattcaaggaagaatttgaggtattagtc 45361365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 46812583 - 46812696
Alignment:
Q  33 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattc 132  Q
    |||||||||  |||| ||||||||||||||||  ||||| ||||||||| ||||||||||    |||| ||||| ||| || ||||| |  | |||||||    
T  46812583 ttggacggaatgacctttttgatggacgtctgacaaatttagggactaaattgatatttcacgtaattgagggatgaatttggccgactcgtaaaaattc 46812682  T
Q  133 aaggacgaatttga 146  Q
    ||||||||| ||||    
T  46812683 aaggacgaagttga 46812696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 6056903 - 6056844
Alignment:
Q  19 cactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggac 78  Q
    |||||| ||||| |||||||||| |||| |||||||||||||| ||| ||||||| ||||    
T  6056903 cactaacggagcatttggacggaaggactattttgatggacgtttgttaaattcaaggac 6056844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 125 - 156
Target Start/End: Original strand, 35693434 - 35693465
Alignment:
Q  125 caaaattcaaggacgaatttgaggtattagtc 156  Q
    ||||||||||||||||||||||||||||||||    
T  35693434 caaaattcaaggacgaatttgaggtattagtc 35693465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 4322559 - 4322633
Alignment:
Q  19 cactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcg 93  Q
    |||||| ||| ||||||||||||||||| |  |||||||| |||    |||||||||||||| ||||||||||||    
T  4322559 cactaacggaccttttggacggagggacgaaattgatggatgtcaaacaaattcagggactattttgatatttcg 4322633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 106
Target Start/End: Original strand, 38614916 - 38614985
Alignment:
Q  36 gacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcaggga 106  Q
    ||||||||||| ||||| |||||||||||  ||||||||||||||| || |||||||| | |||| |||||    
T  38614916 gacggagggac-atttttatggacgtctgacaaattcagggactaagttaatatttcgcataattgaggga 38614985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 11682925 - 11682828
Alignment:
Q  12 tcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacga 109  Q
    |||||||||||||  |||   |||||||||||||| |  |||||||||||||    |||||| ||||||||||||||||| | | |||| ||||||||    
T  11682925 tcatcaccactaacagagagattggacggagggactaaattgatggacgtctaacgaattcaaggactaatttgatattttgcataattgagggacga 11682828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 46439507 - 46439544
Alignment:
Q  9 acatcatcaccactaatggagcttttggacggagggac 46  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  46439507 acatcgtcaccactaacggagcttttggacggagggac 46439544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 48303647 - 48303708
Alignment:
Q  30 cttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatattt 91  Q
    ||||||||||||||||| |  ||||||||||||    |||||||||||||| ||||||||||    
T  48303647 cttttggacggagggacgaaattgatggacgtcaaataaattcagggactattttgatattt 48303708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 31915040 - 31915084
Alignment:
Q  34 tggacggagggaccattttgatggacgtctgtaaaattcagggac 78  Q
    |||||| |||||| |||||||||||||| ||| ||||||||||||    
T  31915040 tggacgtagggactattttgatggacgtttgttaaattcagggac 31915084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454 (Bit Score: 94; Significance: 4e-46; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 12 - 153
Target Start/End: Complemental strand, 1407 - 1266
Alignment:
Q  12 tcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 111  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||  |||||||| |||||||     
T  1407 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcataaaattcatggacgaat 1308  T
Q  112 tttgccgatttttcaaaattcaaggacgaatttgaggtatta 153  Q
    ||  || |||||| |||||||||||||| |||||||||||||    
T  1307 ttaaccaattttttaaaattcaaggacggatttgaggtatta 1266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1712 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold1712
Description:

Target: scaffold1712; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 1071 - 982
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  1071 aaattcagggactattttgatatttcgaataattcagggacgaaatttgccgatttttcaaaattcaaggactattttgaggtattagtc 982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 54258 - 54347
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| | |||||||||||||||    
T  54258 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaaggactattttgaggtattagtc 54347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 12 - 154
Target Start/End: Complemental strand, 8404 - 8264
Alignment:
Q  12 tcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaa 111  Q
    ||||||||||||| | |||||||||||||| | ||||||||||||||||| |  |||||||||||||||| | ||||||| | |||||||| | |||||     
T  8404 tcatcaccactaacgaagcttttggacggatgtaccattttgatggacgtat--aaaattcagggactaaatagatattttgcaaaattcaagaacgaat 8307  T
Q  112 tttgccgatttttcaaaattcaaggacgaatttgaggtattag 154  Q
    || ||| |||||| |||||||||||||||||||||||||||||    
T  8306 ttggccaattttttaaaattcaaggacgaatttgaggtattag 8264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 67 - 162
Target Start/End: Original strand, 1555 - 1650
Alignment:
Q  67 aaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtccttttt 162  Q
    ||||||||||||||| ||| |||||   |||||||||||||||| ||  ||||||||| ||||||||||||||||||||| ||||||||| |||||    
T  1555 aaattcagggactaaattgctatttttcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgatgtattagtctttttt 1650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 85
Target Start/End: Complemental strand, 37349 - 37275
Alignment:
Q  11 atcatcaccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttg 85  Q
    |||||||||| ||| |||| ||||||| ||||  ||||||||||| ||||||||||||||||| |||| ||||||    
T  37349 atcatcaccattaacggagtttttggatggagaaaccattttgatagacgtctgtaaaattcatggacgaatttg 37275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 6639 - 6721
Alignment:
Q  37 acggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgaaaaattcagggacgaaatttgccga 119  Q
    ||||||||||| |||||||||| |||||  ||||||||||| ||| ||||||||||  | |||| ||||||||| || |||||    
T  6639 acggagggacctttttgatggaggtctgataaattcagggattaaattgatatttcacataattgagggacgaatttggccga 6721  T

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Target: scaffold0092 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 36834 - 36899
Alignment:
Q  16 caccactaatggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaa 81  Q
    ||||||||| || || |||||||||| |||| | |||||| ||||| ||| |||||||||||||||    
T  36834 caccactaacggtgcatttggacggaaggactaatttgattgacgtttgttaaattcagggactaa 36899  T

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Target: scaffold0002 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 149
Target Start/End: Complemental strand, 436336 - 436272
Alignment:
Q  85 gatatttcgaaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggt 149  Q
    ||||||||| |||||| | ||| ||| || || ||||||| |||||||||| |||||||||||||    
T  436336 gatatttcgcaaaatttatggatgaatttggctgatttttgaaaattcaagaacgaatttgaggt 436272  T

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