View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20788_high_14 (Length: 302)
Name: NF20788_high_14
Description: NF20788
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20788_high_14 |
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Alignment Details
Target: chr2 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 11 - 282
Target Start/End: Original strand, 21218950 - 21219221
Alignment:
| Q |
11 |
cacagaagacaaaaaacaaataattacattagggatgtatattacaatgacacaaaatcttatagaatcgatacatacatacacacaaaacaataaataa |
110 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
21218950 |
cacagaagacaaaaaacaaataattacattagggatgtatattacaatgacacaaaatcttatagaatcgatacatacatacacacagaacaataaataa |
21219049 |
T |
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| Q |
111 |
aatgatccattaaccaggatatatcagcacagctgacaaatcagtcaaacattgctgtatactaaaagatctcatcaaaagtacgatagtgtaatcagtg |
210 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21219050 |
aatgatccattaaccaggatatatcagcacagttgacaaatcagtcaaacattgctgtatactaaaagatctcatcaaaagtacgatagtgtaatcagtg |
21219149 |
T |
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| Q |
211 |
aatcaagtactatagttgcacaaaacaactatttagtaaaatataatcaagattccaggagtatgatgatgt |
282 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21219150 |
aatcaagtactatagttgcacaaaacaactatttagtaaaatataatcaagattccaggagtatgatgatgt |
21219221 |
T |
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