View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2078_low_7 (Length: 288)
Name: NF2078_low_7
Description: NF2078
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2078_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 134; Significance: 9e-70; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 78 - 278
Target Start/End: Original strand, 31930141 - 31930330
Alignment:
| Q |
78 |
ttcaaccaataaaaaatacaaaagcaactagaccaccaatccaccattgtcatttgtcatattaagctttcacctaaacttctcaccttttcctctcgtc |
177 |
Q |
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| T |
31930141 |
ttcaaccaatgaaaaatacaaaagcaac--------caaaccaccattctcatttgtcatattaagct---acctcaatttctcaccttttcctttcgtc |
31930229 |
T |
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| Q |
178 |
acctatcttttgcttgctcacactaaaaacaatatagattactttgttatgacatttcataaaaggatttgaaaatgccttattatagcaatttgccttt |
277 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31930230 |
acctatcttttgcttgctcacactaaaaacaatatagattactttgttatgacatttcataaaaggatttgaaaatgccttattatagcaatttgccttt |
31930329 |
T |
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