View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20790_high_10 (Length: 338)

Name: NF20790_high_10
Description: NF20790
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20790_high_10
NF20790_high_10
[»] chr5 (30 HSPs)
chr5 (28-328)||(14495548-14495843)
chr5 (27-105)||(16773844-16773922)
chr5 (27-105)||(21589325-21589403)
chr5 (29-82)||(26078035-26078088)
chr5 (29-105)||(6844768-6844844)
chr5 (28-105)||(29075819-29075896)
chr5 (27-95)||(14285198-14285266)
chr5 (29-105)||(17028225-17028301)
chr5 (29-105)||(25627096-25627171)
chr5 (32-104)||(35360048-35360120)
chr5 (27-102)||(34984843-34984918)
chr5 (31-104)||(29173531-29173604)
chr5 (31-104)||(31074273-31074346)
chr5 (31-104)||(37258328-37258401)
chr5 (21-101)||(3315246-3315326)
chr5 (29-105)||(12877732-12877808)
chr5 (27-105)||(7918430-7918508)
chr5 (27-101)||(18595966-18596040)
chr5 (27-105)||(21549099-21549176)
chr5 (28-105)||(18169795-18169870)
chr5 (46-105)||(30000172-30000231)
chr5 (28-71)||(43442234-43442277)
chr5 (35-101)||(18974005-18974071)
chr5 (51-105)||(19043519-19043572)
chr5 (27-105)||(30109270-30109347)
chr5 (55-104)||(4793042-4793091)
chr5 (28-105)||(22020823-22020900)
chr5 (29-105)||(8278236-8278312)
chr5 (28-104)||(18206608-18206684)
chr5 (32-84)||(18437127-18437179)
[»] chr8 (41 HSPs)
chr8 (27-105)||(16852377-16852455)
chr8 (31-105)||(6536561-6536635)
chr8 (27-105)||(18540335-18540413)
chr8 (27-104)||(968399-968476)
chr8 (29-105)||(11819815-11819891)
chr8 (27-105)||(8485036-8485114)
chr8 (27-105)||(33017251-33017328)
chr8 (33-106)||(28787456-28787529)
chr8 (32-104)||(31408084-31408156)
chr8 (29-105)||(44780075-44780151)
chr8 (27-70)||(3624617-3624660)
chr8 (27-105)||(8794307-8794384)
chr8 (27-105)||(12988465-12988542)
chr8 (29-98)||(23361617-23361686)
chr8 (29-82)||(27750769-27750822)
chr8 (29-102)||(35641865-35641938)
chr8 (28-104)||(11492035-11492111)
chr8 (32-104)||(28560649-28560720)
chr8 (21-105)||(28783091-28783175)
chr8 (20-104)||(33727835-33727919)
chr8 (32-104)||(40872918-40872990)
chr8 (30-101)||(29858014-29858085)
chr8 (51-105)||(16317671-16317725)
chr8 (27-81)||(19703472-19703526)
chr8 (48-105)||(7347895-7347952)
chr8 (29-82)||(13129707-13129760)
chr8 (25-70)||(22193360-22193405)
chr8 (31-104)||(26688906-26688979)
chr8 (28-105)||(29915881-29915958)
chr8 (51-104)||(35851863-35851916)
chr8 (49-102)||(42740553-42740606)
chr8 (49-82)||(43594302-43594335)
chr8 (29-69)||(3058046-3058086)
chr8 (28-104)||(6569733-6569809)
chr8 (28-68)||(10287513-10287553)
chr8 (27-67)||(11928730-11928770)
chr8 (32-104)||(18897208-18897279)
chr8 (48-84)||(20469971-20470007)
chr8 (48-92)||(28193528-28193572)
chr8 (29-105)||(29431050-29431126)
chr8 (29-105)||(34966811-34966887)
[»] chr4 (56 HSPs)
chr4 (27-105)||(7292759-7292837)
chr4 (27-105)||(23377993-23378071)
chr4 (31-105)||(30938180-30938254)
chr4 (27-105)||(37109312-37109390)
chr4 (28-105)||(38869806-38869883)
chr4 (28-101)||(39509108-39509181)
chr4 (31-105)||(4249218-4249292)
chr4 (31-105)||(7949415-7949489)
chr4 (28-105)||(28635734-28635811)
chr4 (32-105)||(52254365-52254438)
chr4 (29-104)||(19680750-19680825)
chr4 (27-105)||(16581730-16581808)
chr4 (27-105)||(37274420-37274498)
chr4 (27-84)||(2622377-2622434)
chr4 (31-104)||(46295138-46295211)
chr4 (48-105)||(47386752-47386809)
chr4 (33-105)||(7382040-7382112)
chr4 (29-105)||(8030165-8030241)
chr4 (29-101)||(13015466-13015538)
chr4 (49-105)||(15180797-15180853)
chr4 (28-104)||(40285661-40285737)
chr4 (29-104)||(32046626-32046701)
chr4 (51-105)||(2732055-2732109)
chr4 (27-104)||(2184994-2185071)
chr4 (52-105)||(6666387-6666440)
chr4 (21-82)||(8306516-8306577)
chr4 (28-85)||(21660125-21660182)
chr4 (28-85)||(21668889-21668946)
chr4 (46-83)||(22096591-22096628)
chr4 (52-105)||(26356879-26356932)
chr4 (30-99)||(43623411-43623480)
chr4 (48-105)||(49262645-49262702)
chr4 (31-104)||(51622526-51622599)
chr4 (21-105)||(13901773-13901857)
chr4 (21-105)||(17618312-17618396)
chr4 (49-105)||(49938797-49938853)
chr4 (58-105)||(12793872-12793919)
chr4 (28-71)||(12798722-12798765)
chr4 (31-110)||(37980104-37980182)
chr4 (27-105)||(1730450-1730528)
chr4 (31-105)||(29195136-29195209)
chr4 (48-82)||(34844871-34844905)
chr4 (48-82)||(40058965-40058999)
chr4 (48-82)||(49287908-49287942)
chr4 (49-82)||(9517754-9517787)
chr4 (29-70)||(49576890-49576931)
chr4 (56-105)||(50483071-50483120)
chr4 (50-82)||(5609315-5609347)
chr4 (49-105)||(9693459-9693515)
chr4 (52-84)||(12448770-12448802)
chr4 (32-68)||(13215127-13215163)
chr4 (29-101)||(19238542-19238614)
chr4 (29-105)||(31759619-31759695)
chr4 (28-104)||(40813280-40813356)
chr4 (31-83)||(51948521-51948573)
chr4 (29-105)||(51954153-51954229)
[»] chr3 (52 HSPs)
chr3 (31-105)||(47454578-47454652)
chr3 (28-105)||(2667900-2667977)
chr3 (28-105)||(44743816-44743893)
chr3 (28-104)||(28703366-28703442)
chr3 (29-104)||(36720420-36720495)
chr3 (28-105)||(30311344-30311421)
chr3 (28-105)||(52769944-52770021)
chr3 (49-105)||(10969878-10969934)
chr3 (27-105)||(10445100-10445178)
chr3 (28-105)||(3427515-3427591)
chr3 (31-104)||(37788428-37788500)
chr3 (29-105)||(14339649-14339725)
chr3 (49-105)||(46552990-46553046)
chr3 (27-98)||(53412982-53413053)
chr3 (31-105)||(40777054-40777127)
chr3 (31-105)||(44069799-44069873)
chr3 (28-105)||(4844472-4844549)
chr3 (28-105)||(4870168-4870245)
chr3 (28-105)||(46518666-46518743)
chr3 (28-104)||(4222179-4222255)
chr3 (29-105)||(8075088-8075164)
chr3 (49-105)||(11642170-11642226)
chr3 (28-104)||(15048023-15048099)
chr3 (29-105)||(27093323-27093398)
chr3 (28-80)||(39253735-39253787)
chr3 (21-104)||(19154662-19154745)
chr3 (27-105)||(8051251-8051329)
chr3 (27-105)||(27259198-27259276)
chr3 (27-97)||(32651407-32651477)
chr3 (49-105)||(40063678-40063735)
chr3 (28-105)||(51903839-51903916)
chr3 (49-105)||(40268547-40268603)
chr3 (27-105)||(16354855-16354931)
chr3 (27-82)||(20501733-20501788)
chr3 (28-71)||(29563938-29563981)
chr3 (46-101)||(30510164-30510219)
chr3 (28-83)||(32638983-32639038)
chr3 (27-105)||(12761549-12761627)
chr3 (31-85)||(14186688-14186742)
chr3 (48-82)||(15566612-15566646)
chr3 (48-82)||(25289827-25289861)
chr3 (28-82)||(31520589-31520643)
chr3 (18-76)||(35111208-35111266)
chr3 (48-82)||(49258375-49258409)
chr3 (28-105)||(2709415-2709492)
chr3 (28-105)||(13808846-13808923)
chr3 (29-82)||(33899653-33899706)
chr3 (29-105)||(49397502-49397578)
chr3 (28-104)||(11090127-11090203)
chr3 (29-105)||(30195009-30195084)
chr3 (28-84)||(31608506-31608562)
chr3 (30-82)||(47236955-47237007)
[»] chr1 (51 HSPs)
chr1 (28-105)||(2799900-2799977)
chr1 (28-105)||(40810505-40810582)
chr1 (28-104)||(33700735-33700811)
chr1 (28-105)||(8177143-8177220)
chr1 (49-105)||(29753708-29753764)
chr1 (27-105)||(44126432-44126510)
chr1 (35-104)||(3799951-3800020)
chr1 (27-104)||(36371507-36371584)
chr1 (29-105)||(6122833-6122909)
chr1 (21-105)||(14787297-14787381)
chr1 (29-105)||(21547441-21547517)
chr1 (30-105)||(6650635-6650710)
chr1 (27-105)||(4566585-4566662)
chr1 (32-105)||(12587312-12587384)
chr1 (27-104)||(50901619-50901695)
chr1 (49-105)||(11063615-11063671)
chr1 (29-105)||(18037574-18037650)
chr1 (21-105)||(40257430-40257514)
chr1 (32-104)||(44961807-44961879)
chr1 (34-105)||(17745218-17745288)
chr1 (29-104)||(52116743-52116818)
chr1 (18-104)||(1247141-1247227)
chr1 (33-83)||(2220015-2220065)
chr1 (32-102)||(8904456-8904526)
chr1 (27-105)||(9165156-9165234)
chr1 (27-105)||(10526860-10526938)
chr1 (29-82)||(3265963-3266016)
chr1 (28-85)||(17439955-17440012)
chr1 (31-104)||(27476733-27476806)
chr1 (32-101)||(51814536-51814605)
chr1 (33-85)||(12662325-12662377)
chr1 (29-85)||(24047083-24047139)
chr1 (57-104)||(3679276-3679323)
chr1 (31-82)||(25237102-25237152)
chr1 (32-83)||(28411372-28411423)
chr1 (28-104)||(35699990-35700068)
chr1 (27-105)||(1094562-1094640)
chr1 (48-82)||(8077697-8077731)
chr1 (48-82)||(9500468-9500502)
chr1 (48-82)||(15059515-15059549)
chr1 (28-82)||(15786304-15786358)
chr1 (48-82)||(18646903-18646937)
chr1 (31-105)||(19940833-19940907)
chr1 (55-105)||(23745187-23745237)
chr1 (31-101)||(40814373-40814443)
chr1 (32-105)||(7219879-7219952)
chr1 (28-105)||(27223091-27223168)
chr1 (37-98)||(32524378-32524439)
chr1 (28-101)||(51703817-51703890)
chr1 (29-105)||(16893433-16893509)
chr1 (33-105)||(31605809-31605881)
[»] chr6 (33 HSPs)
chr6 (25-105)||(11306135-11306215)
chr6 (27-105)||(12188264-12188342)
chr6 (28-102)||(30127438-30127512)
chr6 (27-104)||(33549141-33549218)
chr6 (28-104)||(3715490-3715566)
chr6 (27-105)||(20213078-20213156)
chr6 (27-105)||(22107101-22107179)
chr6 (27-104)||(12234469-12234546)
chr6 (32-104)||(9583408-9583479)
chr6 (29-105)||(21418509-21418585)
chr6 (49-105)||(24256783-24256839)
chr6 (49-104)||(13330146-13330201)
chr6 (29-104)||(15951264-15951339)
chr6 (27-105)||(23910074-23910150)
chr6 (31-85)||(1909801-1909855)
chr6 (27-85)||(16405122-16405180)
chr6 (29-82)||(11423605-11423658)
chr6 (48-105)||(18263898-18263955)
chr6 (29-105)||(6758383-6758459)
chr6 (29-105)||(12633048-12633124)
chr6 (58-105)||(1056646-1056693)
chr6 (48-82)||(11448921-11448955)
chr6 (27-105)||(31622952-31623030)
chr6 (50-104)||(32250812-32250866)
chr6 (31-68)||(346571-346608)
chr6 (27-104)||(6385899-6385976)
chr6 (28-105)||(24641151-24641228)
chr6 (28-104)||(1992209-1992285)
chr6 (49-105)||(8597708-8597764)
chr6 (48-92)||(9239025-9239069)
chr6 (29-105)||(18562599-18562675)
chr6 (30-70)||(19162823-19162863)
chr6 (31-95)||(20863416-20863480)
[»] scaffold0258 (1 HSPs)
scaffold0258 (27-105)||(15284-15362)
[»] chr7 (50 HSPs)
chr7 (35-105)||(21558173-21558243)
chr7 (27-105)||(26459371-26459449)
chr7 (54-105)||(42261006-42261057)
chr7 (27-105)||(17113832-17113910)
chr7 (27-105)||(39631881-39631959)
chr7 (28-105)||(17040973-17041050)
chr7 (31-104)||(31835233-31835306)
chr7 (31-104)||(43215225-43215298)
chr7 (29-105)||(18363735-18363810)
chr7 (21-105)||(30579366-30579450)
chr7 (29-105)||(43590946-43591022)
chr7 (29-104)||(37162312-37162387)
chr7 (31-105)||(37473655-37473729)
chr7 (27-84)||(23552155-23552212)
chr7 (29-105)||(2446347-2446423)
chr7 (28-104)||(29785263-29785339)
chr7 (29-101)||(42711997-42712069)
chr7 (28-104)||(48771976-48772052)
chr7 (27-105)||(15905635-15905712)
chr7 (32-102)||(38374563-38374633)
chr7 (31-105)||(41519226-41519299)
chr7 (28-105)||(9608590-9608667)
chr7 (28-105)||(9836162-9836239)
chr7 (20-101)||(27376722-27376803)
chr7 (28-104)||(3174965-3175041)
chr7 (29-85)||(5075957-5076013)
chr7 (49-105)||(33222429-33222485)
chr7 (48-104)||(41975945-41976001)
chr7 (30-105)||(7309396-7309470)
chr7 (29-68)||(20335829-20335868)
chr7 (42-105)||(26199561-26199624)
chr7 (31-82)||(28647007-28647057)
chr7 (31-85)||(2882991-2883045)
chr7 (31-105)||(15137594-15137668)
chr7 (31-105)||(29385704-29385778)
chr7 (31-105)||(45228986-45229060)
chr7 (27-68)||(7499922-7499963)
chr7 (28-105)||(9183152-9183229)
chr7 (27-104)||(19553490-19553567)
chr7 (27-68)||(22760900-22760941)
chr7 (32-105)||(25655189-25655262)
chr7 (40-105)||(41487409-41487474)
chr7 (49-82)||(41907626-41907659)
chr7 (32-104)||(5273552-5273624)
chr7 (28-104)||(7744074-7744150)
chr7 (27-63)||(7801217-7801253)
chr7 (28-104)||(26703163-26703239)
chr7 (29-105)||(27313695-27313771)
chr7 (52-104)||(33181172-33181224)
chr7 (32-104)||(45709670-45709742)
[»] chr2 (40 HSPs)
chr2 (29-104)||(6859274-6859349)
chr2 (27-105)||(4060175-4060253)
chr2 (27-105)||(19322805-19322883)
chr2 (49-105)||(2750587-2750643)
chr2 (28-104)||(14500315-14500391)
chr2 (29-105)||(23052484-23052560)
chr2 (27-105)||(21213806-21213884)
chr2 (27-105)||(33582010-33582088)
chr2 (27-101)||(39715029-39715103)
chr2 (27-104)||(42922451-42922529)
chr2 (32-105)||(34041549-34041622)
chr2 (29-105)||(11062399-11062474)
chr2 (31-103)||(45026784-45026856)
chr2 (29-104)||(21195638-21195713)
chr2 (31-105)||(1435105-1435178)
chr2 (29-83)||(7799018-7799072)
chr2 (31-105)||(30410510-30410584)
chr2 (31-104)||(13803536-13803609)
chr2 (28-105)||(16918539-16918616)
chr2 (28-105)||(25637189-25637266)
chr2 (27-104)||(40416352-40416429)
chr2 (20-105)||(41908599-41908684)
chr2 (27-104)||(42327357-42327434)
chr2 (51-103)||(37971956-37972008)
chr2 (27-82)||(19244146-19244201)
chr2 (32-102)||(24144716-24144786)
chr2 (33-83)||(33569841-33569891)
chr2 (27-105)||(37480112-37480190)
chr2 (27-105)||(42602591-42602669)
chr2 (32-105)||(4438940-4439013)
chr2 (27-104)||(12086091-12086168)
chr2 (29-82)||(17737608-17737661)
chr2 (27-68)||(29503308-29503349)
chr2 (28-85)||(33962765-33962822)
chr2 (31-104)||(35710432-35710505)
chr2 (48-101)||(39764991-39765044)
chr2 (21-66)||(42860379-42860424)
chr2 (33-85)||(11251130-11251182)
chr2 (49-105)||(21303955-21304011)
chr2 (31-103)||(30359695-30359766)
[»] scaffold0002 (1 HSPs)
scaffold0002 (27-104)||(94935-95010)
[»] scaffold0074 (1 HSPs)
scaffold0074 (31-104)||(45721-45794)
[»] scaffold0032 (1 HSPs)
scaffold0032 (28-104)||(112320-112396)
[»] scaffold0008 (1 HSPs)
scaffold0008 (32-104)||(49348-49420)
[»] scaffold0299 (1 HSPs)
scaffold0299 (28-71)||(11566-11609)
[»] scaffold0196 (1 HSPs)
scaffold0196 (32-105)||(17372-17445)
[»] scaffold0238 (1 HSPs)
scaffold0238 (31-82)||(2695-2746)
[»] scaffold1367 (1 HSPs)
scaffold1367 (28-74)||(832-878)
[»] scaffold0194 (1 HSPs)
scaffold0194 (28-70)||(13042-13084)
[»] scaffold0180 (1 HSPs)
scaffold0180 (27-101)||(19928-20001)
[»] scaffold0070 (1 HSPs)
scaffold0070 (51-105)||(42482-42535)
[»] scaffold0291 (1 HSPs)
scaffold0291 (28-68)||(2468-2508)


Alignment Details
Target: chr5 (Bit Score: 221; Significance: 1e-121; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 28 - 328
Target Start/End: Complemental strand, 14495843 - 14495548
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttcggaagnnnnnnnnttagtttta 127  Q
    ||||||||||||| ||| |||||||||||| || |||||||||   |||||||||||  ||| |||||||||||||||| ||         |||||||||    
T  14495843 ctgggagtgtgctcctcctcgaggtctcagatttgattctctccgatgccaatttagatgggctagtttagcttcttcgaaa-----aaaattagtttta 14495749  T
Q  128 ctattgattgaaaaagttaaactttgtcacacaagtcttataaaacggattaagggtttataatacttgattcatttgtattctatatagtttagaaatc 227  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14495748 ctattgattggaaaagttaaactttgtcacacaagtcttataaaacggattaagggtttataatacttgattcatttgtattctatatagtttagaaatc 14495649  T
Q  228 tgttttgagcatatacactttggttgaaatccaacaaccaatattgatggatcacattaagggtcccacctaaaggatagaagattgatccctacccttt 327  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14495648 tgttttgagcatatacactttggttgaaatccaacaaccaatattgatggatcacattaagggtcccacctaaaggatagaagattgatccctacccttt 14495549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 16773844 - 16773922
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||  |||||||||||| ||| || ||||||||||||    
T  16773844 cctgggagtgtgctcctcctcgaggtctcaggttcgattctctctgatgccaatttaggtgggctaatttagcttcttc 16773922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 21589325 - 21589403
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||| |||| ||| |||| |||||||||||||||| |||| ||||||||||||| ||| |||||||||||||||    
T  21589325 cctgggagtctgctactcctcgatgtctcaggttcgattccctctggtgccaatttaggtgggctagtttagcttcttc 21589403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 26078088 - 26078035
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaattt 82  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  26078088 tgggagtatgcttctcttcaaggtctcaggttcgattctctctagtgccaattt 26078035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 105
Target Start/End: Original strand, 6844768 - 6844844
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||| | ||| ||||||||| |||||||||| ||||| ||||||||||||| || ||||||||||||||||    
T  6844768 tgggagtgtgttcctcctcgaggtctaaggttcgattatctctcgtgccaatttaggtggattagtttagcttcttc 6844844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 29075819 - 29075896
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||||||| ||| ||||| ||||| |||||||||||||| ||||||||||||  ||| || ||||||||||||    
T  29075819 ctgggagtgtgctcctcctcgagatctcatgttcgattctctctggtgccaatttagatgggctaatttagcttcttc 29075896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 95
Target Start/End: Original strand, 14285198 - 14285266
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtt 95  Q
    |||||||||||||| ||| || ||||||||||||||||||||||| ||||||||||  | |||||||||    
T  14285198 cctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttgagggggttagtt 14285266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 17028301 - 17028225
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||| ||| || |||||||||||| ||||| |||||||| ||||||||| ||| || ||||||||||||    
T  17028301 tgggagtgtgctcctcctcaaggtctcaggtttgattccctctagtgtcaatttaggtgggctaatttagcttcttc 17028225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 105
Target Start/End: Original strand, 25627096 - 25627171
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||| ||| || ||||||||||||||||||||||| ||| |||||| |  |||||||||||||||||||    
T  25627096 tgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgtcaattt-gaggggttagtttagcttcttc 25627171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 104
Target Start/End: Complemental strand, 35360120 - 35360048
Alignment:
Q  32 gagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    ||||||||||||| ||||||||||||||||||||||| |  ||||||||||||| | |  |||||||||||||    
T  35360120 gagtgtgcttctcctcgaggtctcaggttcgattctcaccggtgccaatttaggtgagcgagtttagcttctt 35360048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 34984843 - 34984918
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttc 102  Q
    |||||||||||||| ||| || |||||| |||||||||||||||| ||||||||||  | ||||| ||||||||||    
T  34984843 cctgggagtgtgctcctcctcaaggtcttaggttcgattctctctggtgccaatttgagggggttggtttagcttc 34984918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 29173531 - 29173604
Alignment:
Q  31 ggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    |||||||||| ||| ||||||| |||||||||||| ||||| ||| ||||||||| ||| || |||||||||||    
T  29173531 ggagtgtgctcctcctcgaggtttcaggttcgattatctctggtgtcaatttaggtgggctaatttagcttctt 29173604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 31074273 - 31074346
Alignment:
Q  31 ggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    |||||||| | ||| || || |||||||||||||||||||| ||||||||||| | || |||||||||||||||    
T  31074273 ggagtgtgttcctcctcaagatctcaggttcgattctctctggtgccaatttaagaggattagtttagcttctt 31074346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 37258401 - 37258328
Alignment:
Q  31 ggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    |||||||||| ||| || |||| |||||||||||||||||| ||| ||||||  | ||||||||||||||||||    
T  37258401 ggagtgtgctcctcctcaaggtttcaggttcgattctctctggtgtcaatttgagggggttagtttagcttctt 37258328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 21 - 101
Target Start/End: Original strand, 3315246 - 3315326
Alignment:
Q  21 ttgaggcctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagctt 101  Q
    ||||| ||| |||||| ||| ||| || |||||||||||||||||||| |  |||||||||||||||| ||| ||||||||    
T  3315246 ttgagaccttggagtgcgctcctcctcaaggtctcaggttcgattctcccaggtgccaatttaggcggattaatttagctt 3315326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 29 - 105
Target Start/End: Original strand, 12877732 - 12877808
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||| ||||| || | ||||||||||||||||||||| || | |||||||| ||| || ||||||||||||    
T  12877732 tgggagtgtgtttctcctcaatgtctcaggttcgattctctctggtactaatttaggtgggctaatttagcttcttc 12877808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 7918508 - 7918430
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||||  || ||| || |||||| |||||||||||||||| ||||||||||  | || ||||||||||||||||    
T  7918508 cctgggagtgcactcctcctcaaggtcttaggttcgattctctctggtgccaatttgaggggtttagtttagcttcttc 7918430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 18596040 - 18595966
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagctt 101  Q
    ||||||| |||||| ||| || |||||| |||||||||| ||||| ||||||||||  | |||||||||||||||    
T  18596040 cctgggaatgtgctcctcctcaaggtcttaggttcgattttctctggtgccaatttgagggggttagtttagctt 18595966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 21549176 - 21549099
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||||| ||| |  | |||||| |||||||| |||||||||||||||| |  |||||||||||||||||||    
T  21549176 cctgggagtgtgctcctccttaaagtctcaagttcgattttctctagtgccaattt-gaggggttagtttagcttcttc 21549099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 18169870 - 18169795
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||||| | ||||||| ||||| ||||||||||||||| |||||||| ||||| ||| || ||||||||||||    
T  18169870 ctgggagtgtggtcctcttcgtggtct-aggttcgattctctc-agtgccaaattaggtgggctaatttagcttcttc 18169795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 105
Target Start/End: Original strand, 30000172 - 30000231
Alignment:
Q  46 tcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||||||||| |||||||  |||||||||| | |||||| |||| |||||||    
T  30000172 tcgaggtctcaggttcgactctctctgatgccaatttaagtgggttaatttaacttcttc 30000231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 28 - 71
Target Start/End: Original strand, 43442234 - 43442277
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctct 71  Q
    ||||||||||||| ||| || |||||||||||||||||||||||    
T  43442234 ctgggagtgtgctcctcctcaaggtctcaggttcgattctctct 43442277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 18974005 - 18974071
Alignment:
Q  35 tgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagctt 101  Q
    |||||| ||| || |||| ||||||||||||||| || ||||||||||  | |||||||||||||||    
T  18974005 tgtgctcctcctcaaggtgtcaggttcgattctccctggtgccaatttgagtgggttagtttagctt 18974071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 105
Target Start/End: Original strand, 19043519 - 19043572
Alignment:
Q  51 gtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||||| || ||||||||||||||||| |  |||||||||||||||||||    
T  19043519 gtctcaggttcaatcctctctagtgccaattt-gaggggttagtttagcttcttc 19043572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 30109347 - 30109270
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||||| ||| | ||||||||||||||||||| | |  |||| |||||||| ||| || ||||||||||||    
T  30109347 cctgggagtgtgctcctccttgaggtctcaggttcgattc-ccccggtgctaatttaggtgggctaatttagcttcttc 30109270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 4793091 - 4793042
Alignment:
Q  55 caggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    |||||||||||||| | |||||||||||||| ||| || |||||||||||    
T  4793091 caggttcgattctccccagtgccaatttaggtgggctaatttagcttctt 4793042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 22020900 - 22020823
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||||||| ||| | || ||||||| |||||||||||| ||||  |||||||| ||| || ||||| ||||||    
T  22020900 ctgggagtgtgctcctccttgaagtctcagattcgattctctccagtgttaatttaggtgggctaatttagtttcttc 22020823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 8278312 - 8278236
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||| ||| ||||| ||||| ||| |||| ||||  ||||| ||||||| ||| || ||||||||||||    
T  8278312 tgggagtgtgctcctcctcgagatctcaagtttgattatctccggtgccgatttaggtgggctaatttagcttcttc 8278236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 18206684 - 18206608
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    ||||||||||||| ||| |  ||||  ||| ||||| |||||||||||||||||| || ||| || |||||||||||    
T  18206684 ctgggagtgtgctcctcctttaggttccagattcgactctctctagtgccaatttgggtgggctaatttagcttctt 18206608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 18437127 - 18437179
Alignment:
Q  32 gagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttag 84  Q
    ||||||||| ||| || | || || ||||||||||||||||||||||||||||    
T  18437127 gagtgtgctcctcctcaaagtttcgggttcgattctctctagtgccaatttag 18437179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 3e-20; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 16852377 - 16852455
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||||| ||| |||||||||||||||||||||||  ||||||||||||||| ||| || ||||||||||||    
T  16852377 cctgggagtgtgctcctcctcgaggtctcaggttcgattctccttagtgccaatttaggtgggctattttagcttcttc 16852455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 31 - 105
Target Start/End: Original strand, 6536561 - 6536635
Alignment:
Q  31 ggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||| ||| || ||||||||||||| ||||||||| ||||||||||||| |||||| ||||||||||||    
T  6536561 ggagtgtgctcctcctcaaggtctcaggttcaattctctctggtgccaatttaggtgggttaatttagcttcttc 6536635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 18540335 - 18540413
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||  | |||||| ||||||||||||    
T  18540335 cctgggagtgtacttctcctcaaggtctcaggttcgattctctctggtgccaatttgagagggttaatttagcttcttc 18540413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 968399 - 968476
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    |||||||||||||| ||| |||||||||||||||||||||||||   |||||||||||| ||| || |||||||||||    
T  968399 cctgggagtgtgctcctcctcgaggtctcaggttcgattctctccgatgccaatttaggtgggctaatttagcttctt 968476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 105
Target Start/End: Original strand, 11819815 - 11819891
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||| ||| || |||||||||||||||||| |||||||| |||||| || ||| || ||||||||||||    
T  11819815 tgggagtgtgctcctcctcaaggtctcaggttcgattcactctagtgtcaatttgggtgggctaatttagcttcttc 11819891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 8485036 - 8485114
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||| ||||||||| ||||| |||||||||  ||||||||||||  ||||||||||||| ||| || ||||||||||||    
T  8485036 cctgtgagtgtgctcctctttgaggtctcattttcgattctctccggtgccaatttaggtgggctaatttagcttcttc 8485114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 33017251 - 33017328
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||| |||||||| ||| || ||||||||||||||||||||||| |||||||||| |  ||||||||||| |||||||    
T  33017251 cctggaagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaattt-gaggggttagtttaacttcttc 33017328  T

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Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 28787529 - 28787456
Alignment:
Q  33 agtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttcg 106  Q
    |||||||| ||| || |||||||||||| ||||||| | |||||||||||||| |||  |||||||||||||||    
T  28787529 agtgtgctcctcctcaaggtctcaggtttgattctccccagtgccaatttaggtgggaaagtttagcttcttcg 28787456  T

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Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 104
Target Start/End: Complemental strand, 31408156 - 31408084
Alignment:
Q  32 gagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    ||||||||| ||| || |||| ||||||||||||||||||| || ||||||| | |||||| |||||||||||    
T  31408156 gagtgtgctcctcctcaaggtttcaggttcgattctctctaatgtcaatttaagggggttaatttagcttctt 31408084  T

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Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 44780151 - 44780075
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||| ||| || |||||||||||| ||||| |||||||| |||||| || ||| || ||||||||||||    
T  44780151 tgggagtgtgctcctcctcaaggtctcaggtttgattccctctagtgtcaatttgggtgggctaatttagcttcttc 44780075  T

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Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 70
Target Start/End: Original strand, 3624617 - 3624660
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctc 70  Q
    |||||||||||||| |||||| ||||||||||||||||||||||    
T  3624617 cctgggagtgtgctcctcttcaaggtctcaggttcgattctctc 3624660  T

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Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 8794384 - 8794307
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||| |||||||| ||| ||  |||||||||||||||||||||| || |||||||| | |||||| ||||||||||||    
T  8794384 cctggaagtgtgctcctcctcagggtctcaggttcgattctctctggtaccaatttaag-gggttaatttagcttcttc 8794307  T

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Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 12988465 - 12988542
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||| |||||||| ||| || |||| ||||||||||| |||||| |||||||||| |  |||||||||||||||||||    
T  12988465 cctggaagtgtgctcctcctcaaggtttcaggttcgatcctctctggtgccaattt-gaggggttagtttagcttcttc 12988542  T

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Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 98
Target Start/End: Complemental strand, 23361686 - 23361617
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttag 98  Q
    |||||||||||| ||| || ||||||||||||| ||||||||| ||| ||||||||| ||| || |||||    
T  23361686 tgggagtgtgctcctcctcaaggtctcaggttcaattctctctggtgtcaatttaggtgggctaatttag 23361617  T

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Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 27750769 - 27750822
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaattt 82  Q
    |||||||||||| ||| || |||||||||||||||||| |||||||| ||||||    
T  27750769 tgggagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaattt 27750822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 102
Target Start/End: Complemental strand, 35641938 - 35641865
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttc 102  Q
    |||||||||||| ||| |||| |||||||||||||||||||| ||  |||||||||  ||| || |||||||||    
T  35641938 tgggagtgtgctcctcctcgatgtctcaggttcgattctctccagaaccaatttagatgggctaatttagcttc 35641865  T

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Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 11492111 - 11492035
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    ||||||||||||| ||  ||||||||| ||||||||||||||  |||| |||||| || ||| || |||||||||||    
T  11492111 ctgggagtgtgctccttctcgaggtcttaggttcgattctcttcagtgtcaatttgggtgggctaatttagcttctt 11492035  T

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Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 28560649 - 28560720
Alignment:
Q  32 gagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    ||||||||| || ||| ||| |||| ||||||||||||||||||| |||||||| |||||| ||||| |||||    
T  28560649 gagtgtgctccttttcaagg-ctcatgttcgattctctctagtgctaatttaggtgggttaatttagtttctt 28560720  T

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Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 28783091 - 28783175
Alignment:
Q  21 ttgaggcctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||| |||||||||||||| ||| || |||||||| |||||||||||    |||||||||| || ||| || ||||||||||||    
T  28783091 ttgagacctgggagtgtgctcctcctcaaggtctcatgttcgattctcctcggtgccaatttgggtgggctaatttagcttcttc 28783175  T

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Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 33727919 - 33727835
Alignment:
Q  20 tttgaggcctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    |||||| | ||| |||||||| ||| || |||||||||||||||||| |||||||| |||||| |  ||| || |||||||||||    
T  33727919 tttgagacttggaagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttggatgggctaatttagcttctt 33727835  T

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Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 40872918 - 40872990
Alignment:
Q  32 gagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    ||||||||| |||||| |||| | |||||| ||||||||  ||||||||||||| ||| ||||||| ||||||    
T  40872918 gagtgtgctcctcttcaaggttttaggttccattctctccggtgccaatttaggtgggctagtttaacttctt 40872990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 29858085 - 29858014
Alignment:
Q  30 gggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagctt 101  Q
    ||||||||||| ||| ||||||||||||||||||||| |    ||||||||||||| ||| || ||||||||    
T  29858085 gggagtgtgctcctcctcgaggtctcaggttcgattcccctcggtgccaatttaggtgggctaatttagctt 29858014  T

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Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 105
Target Start/End: Original strand, 16317671 - 16317725
Alignment:
Q  51 gtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||| |||||||||||||| ||||||||||  | ||| |||||||||||||||    
T  16317671 gtctcatgttcgattctctctggtgccaatttcagtgggctagtttagcttcttc 16317725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 19703526 - 19703472
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatt 81  Q
    |||| ||||||||| ||| || |||||||||||||||||||| |||||| |||||    
T  19703526 cctgagagtgtgctcctcctcaaggtctcaggttcgattctccctagtgtcaatt 19703472  T

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Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 7347895 - 7347952
Alignment:
Q  48 gaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||| |||||||| ||||||||| ||| ||||||||| ||| || ||||||||||||    
T  7347895 gaggtttcaggttcaattctctcttgtgtcaatttaggtgggctaatttagcttcttc 7347952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 13129707 - 13129760
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaattt 82  Q
    |||||||| ||| ||| || |||| |||||||||||||||||| ||||||||||    
T  13129707 tgggagtgcgctcctcctcaaggtttcaggttcgattctctctggtgccaattt 13129760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 22193405 - 22193360
Alignment:
Q  25 ggcctgggagtgtgcttctcttcgaggtctcaggttcgattctctc 70  Q
    |||||||||||||||| ||| || |||||| |||||||||||||||    
T  22193405 ggcctgggagtgtgctcctcctcaaggtcttaggttcgattctctc 22193360  T

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Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 26688906 - 26688979
Alignment:
Q  31 ggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    |||||||||| ||| || |||||||||||||  ||||  |||||| |||||| || ||| ||||||||||||||    
T  26688906 ggagtgtgctcctcctcaaggtctcaggttcagttcttcctagtgtcaatttgggtgggctagtttagcttctt 26688979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 29915958 - 29915881
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||  ||| ||| || ||||||||  ||||||| ||||||||||||||||| |  | ||||||||||||||||    
T  29915958 ctgggagtacgctcctcctcaaggtctcatattcgattttctctagtgccaatttaaggtgtttagtttagcttcttc 29915881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 104
Target Start/End: Original strand, 35851863 - 35851916
Alignment:
Q  51 gtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    |||||| |||||||| ||||| |||| ||||| ||| |||||||||||||||||    
T  35851863 gtctcatgttcgattatctctggtgctaatttgggcaggttagtttagcttctt 35851916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 42740553 - 42740606
Alignment:
Q  49 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttc 102  Q
    ||||||||||||| ||||||||| ||| ||||||| | | ||||||||||||||    
T  42740553 aggtctcaggttcaattctctctggtgtcaatttaagggagttagtttagcttc 42740606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 82
Target Start/End: Complemental strand, 43594335 - 43594302
Alignment:
Q  49 aggtctcaggttcgattctctctagtgccaattt 82  Q
    ||||||||||||||||||||||||||| ||||||    
T  43594335 aggtctcaggttcgattctctctagtgtcaattt 43594302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 3058086 - 3058046
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctct 69  Q
    |||||||||||| |||| | |||||||||||||||||||||    
T  3058086 tgggagtgtgctcctctgcaaggtctcaggttcgattctct 3058046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 6569809 - 6569733
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    ||||||||||||| ||| |  |||| ||| |||||||||||| | ||| ||||||  | ||||||||||||||||||    
T  6569809 ctgggagtgtgctcctcctttaggtttcatgttcgattctctttggtgtcaatttgagggggttagtttagcttctt 6569733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 10287513 - 10287553
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctc 68  Q
    |||| |||||||||||| |||||||||||||||| ||||||    
T  10287513 ctggaagtgtgcttctcctcgaggtctcaggttcaattctc 10287553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 11928770 - 11928730
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattct 67  Q
    ||||| |||||||| ||| ||||||||||||||||||||||    
T  11928770 cctggaagtgtgctcctcctcgaggtctcaggttcgattct 11928730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 18897208 - 18897279
Alignment:
Q  32 gagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    ||||||||| ||| || |||||||| ||||||||||  || ||||||||||||| ||| || |||||||||||    
T  18897208 gagtgtgctcctcctcaaggtctcatgttcgattcttcctggtgccaatttaggtgggata-tttagcttctt 18897279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 20469971 - 20470007
Alignment:
Q  48 gaggtctcaggttcgattctctctagtgccaatttag 84  Q
    ||||||||||||||||||| |||||| ||||||||||    
T  20469971 gaggtctcaggttcgattccctctagagccaatttag 20470007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 28193528 - 28193572
Alignment:
Q  48 gaggtctcaggttcgattctctctagtgccaatttaggcgggtta 92  Q
    ||||||||||||||||||| |||| |||||||||| || ||||||    
T  28193528 gaggtctcaggttcgattccctctggtgccaatttcggtgggtta 28193572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 105
Target Start/End: Original strand, 29431050 - 29431126
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||| ||| | |||| ||||||||||||||||| | |||| |||||  | ||| || ||||||||||||    
T  29431050 tgggagtgtgctcctccttgaggcctcaggttcgattctctttggtgctaatttgagtgggctaatttagcttcttc 29431126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 34966887 - 34966811
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||| ||||||||||||||| ||| |||| || |  ||| || |||||| ||| || ||||||||||||    
T  34966887 tgggagtgtgctactcttcgaggtctcaagtttgattatccccggtggcattttaggtgggctaatttagcttcttc 34966811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 3e-20; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 7292837 - 7292759
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||||| ||| || | ||||||||||||||||||||||||||||||||  | |||||||||||||||||||    
T  7292837 cctgggagtgtgctcctcctcaaagtctcaggttcgattctctctagtgccaatttgagggggttagtttagcttcttc 7292759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 23377993 - 23378071
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||||| ||| || ||||||||||||||||||||||||||||||||||  | ||| |||||||||||||||    
T  23377993 cctgggagtgtgctcctcctcaaggtctcaggttcgattctctctagtgccaatttgagggggctagtttagcttcttc 23378071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 30938254 - 30938180
Alignment:
Q  31 ggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||| ||| ||||||||||||||||||||||| | | |||||||||||| |||||||||||||||||||    
T  30938254 ggagtgtgctcctcctcgaggtctcaggttcgattctccccaatgccaatttaggtgggttagtttagcttcttc 30938180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 37109390 - 37109312
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||||| ||| || ||||||||||||||||||||||| ||||||||||  | |||||||||||| ||||||    
T  37109390 cctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttgagggggttagtttagtttcttc 37109312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 38869806 - 38869883
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||||||| ||| || |||||||||||||||||| |||| ||||||||||  | |||||||||||||||||||    
T  38869806 ctgggagtgtgctcctcctcaaggtctcaggttcgattccctctggtgccaatttgagggggttagtttagcttcttc 38869883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 39509108 - 39509181
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagctt 101  Q
    ||||||||||||| ||| ||||||||||||||||||||||| | |||| ||||||||| |||||| ||||||||    
T  39509108 ctgggagtgtgctcctcctcgaggtctcaggttcgattctccccagtggcaatttaggtgggttaatttagctt 39509181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 105
Target Start/End: Original strand, 4249218 - 4249292
Alignment:
Q  31 ggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||| ||| || |||||||||||| |||||||||| ||||||||||  | |||||||||||||||||||    
T  4249218 ggagtgtgctcctcctcaaggtctcaggtttgattctctctggtgccaatttgagggggttagtttagcttcttc 4249292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 7949489 - 7949415
Alignment:
Q  31 ggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||| ||| || ||||||||||||||||||||||| ||| ||||||||| ||| || ||||||||||||    
T  7949489 ggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgtcaatttaggtgggctaatttagcttcttc 7949415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 28635734 - 28635811
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||||||| ||| | ||||||| |||||||||||||||| |||||||||| || ||| || ||||||||||||    
T  28635734 ctgggagtgtgctcctcctggaggtcttaggttcgattctctctggtgccaatttgggtgggctaatttagcttcttc 28635811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 52254438 - 52254365
Alignment:
Q  32 gagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||| ||| | ||||| ||||||| ||||||||| ||||||||| |||||||| |||||||||||||||    
T  52254438 gagtgtgctcctccttgaggtttcaggttagattctctccagtgccaatgtaggcgggctagtttagcttcttc 52254365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 104
Target Start/End: Complemental strand, 19680825 - 19680750
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    ||||||||||||  || || |||||| |||||||||||||||| ||||||||||| |  |||||||||||||||||    
T  19680825 tgggagtgtgctcttcctcaaggtcttaggttcgattctctctggtgccaatttaaggaggttagtttagcttctt 19680750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 16581730 - 16581808
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||| |||| ||| || ||||||||||||| ||| ||||| ||||||||||  | |||||||||||||||||||    
T  16581730 cctgggagtctgctcctcctcaaggtctcaggttctattatctctggtgccaatttgagagggttagtttagcttcttc 16581808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 37274498 - 37274420
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||||| ||| || |||||| |||||||||||||||| |||| |||||| | ||| || ||||||||||||    
T  37274498 cctgggagtgtgctcctcctcaaggtcttaggttcgattctctctggtgctaatttaagtgggctaatttagcttcttc 37274420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 2622434 - 2622377
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttag 84  Q
    |||||||||||||| ||| || | ||||||||||||||||||||| ||||||||||||    
T  2622434 cctgggagtgtgctcctcctccatgtctcaggttcgattctctctggtgccaatttag 2622377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 46295138 - 46295211
Alignment:
Q  31 ggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    |||||||||| ||| || |||||||||||||||||||| |  |||||||||| || ||| ||||||||||||||    
T  46295138 ggagtgtgctcctcctcaaggtctcaggttcgattctccccggtgccaatttgggtgggctagtttagcttctt 46295211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 47386809 - 47386752
Alignment:
Q  48 gaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||||| ||||||||||||| ||||||||| ||| || ||||||||||||    
T  47386809 gaggtctcaggttcaattctctctagtgtcaatttaggtgggctaatttagcttcttc 47386752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 33 - 105
Target Start/End: Original strand, 7382040 - 7382112
Alignment:
Q  33 agtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||| | | |||||||||||||||| |||||| | |||||||||||||  | |||||||||||||||||    
T  7382040 agtgtgctccgcgtcgaggtctcaggttcaattctccccagtgccaatttagttgagttagtttagcttcttc 7382112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 8030241 - 8030165
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||| ||| || |||||||| ||||||||| |||||||| |||||| || ||| || ||||||||||||    
T  8030241 tgggagtgtgctcctcctcaaggtctcaagttcgattccctctagtgtcaatttgggtgggctaatttagcttcttc 8030165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 29 - 101
Target Start/End: Original strand, 13015466 - 13015538
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagctt 101  Q
    |||||||||||| ||| |||| |||||| |||||||||||||  ||| ||||||||| |||||| ||||||||    
T  13015466 tgggagtgtgctcctcctcgaagtctcatgttcgattctctcaggtgtcaatttaggtgggttaatttagctt 13015538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 49 - 105
Target Start/End: Original strand, 15180797 - 15180853
Alignment:
Q  49 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||| |||||||||||||||| ||||||||||  | |||||||||||||||||||    
T  15180797 aggtcttaggttcgattctctctggtgccaatttgagggggttagtttagcttcttc 15180853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 40285661 - 40285737
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    ||||||||||||| ||||| ||||||| | |||||||||| |||| ||  |||||||| ||||||||||| ||||||    
T  40285661 ctgggagtgtgctcctctttgaggtctaaagttcgattctttctaatgttaatttaggtgggttagtttaacttctt 40285737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 104
Target Start/End: Complemental strand, 32046701 - 32046626
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    |||||| ||||| |||||||||||||| ||||||||||  ||  ||||||||||||  | ||||||||||||||||    
T  32046701 tgggagagtgctcctcttcgaggtctcgggttcgattccttccggtgccaatttagatgagttagtttagcttctt 32046626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 105
Target Start/End: Original strand, 2732055 - 2732109
Alignment:
Q  51 gtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||||||||||||||  |||||||||| || ||| |||||||||||||||    
T  2732055 gtctcaggttcgattctctccggtgccaatttgggtgggctagtttagcttcttc 2732109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 2185071 - 2184994
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    |||||||||||||| ||  || | ||||||||||||||||||||   |||||||||  | ||||||||||||||||||    
T  2185071 cctgggagtgtgctccttctcaaagtctcaggttcgattctctccgatgccaatttgagggggttagtttagcttctt 2184994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 52 - 105
Target Start/End: Complemental strand, 6666440 - 6666387
Alignment:
Q  52 tctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||||||||||| ||||| ||||  | |||||||||||||||||||    
T  6666440 tctcaggttcgattctctctggtgcccatttgagggggttagtttagcttcttc 6666387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 8306516 - 8306577
Alignment:
Q  21 ttgaggcctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaattt 82  Q
    ||||| |||||||||||||| ||| |||| |||| | |||||||||||||||||| ||||||    
T  8306516 ttgagacctgggagtgtgctcctcctcgaagtcttaagttcgattctctctagtgtcaattt 8306577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 21660182 - 21660125
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttagg 85  Q
    |||||||||||||  || ||||||||||| |||||||| ||||||||| |||||||||    
T  21660182 ctgggagtgtgctcttcctcgaggtctcaagttcgattatctctagtgtcaatttagg 21660125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 21668946 - 21668889
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttagg 85  Q
    |||||||||||||  || ||||||||||| |||||||| ||||||||| |||||||||    
T  21668946 ctgggagtgtgctcttcctcgaggtctcaagttcgattatctctagtgtcaatttagg 21668889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 46 - 83
Target Start/End: Complemental strand, 22096628 - 22096591
Alignment:
Q  46 tcgaggtctcaggttcgattctctctagtgccaattta 83  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  22096628 tcgaggtctcaggttcgattctccctagtgccaattta 22096591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 52 - 105
Target Start/End: Original strand, 26356879 - 26356932
Alignment:
Q  52 tctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||| ||||||||||| | |||||||||||||| ||| |||||||||||||||    
T  26356879 tctcatgttcgattctccccagtgccaatttaggtgggctagtttagcttcttc 26356932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 43623480 - 43623411
Alignment:
Q  30 gggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagc 99  Q
    ||||||||||| ||| | || ||||||||||||||||||| ||||  ||||||||| ||| |||||||||    
T  43623480 gggagtgtgctcctccttgaagtctcaggttcgattctctatagtagcaatttaggtgggctagtttagc 43623411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 49262702 - 49262645
Alignment:
Q  48 gaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||||||||||||||| | |||||||||||||| ||| || ||||| ||||||    
T  49262702 gaggtctcaggttcgattctccccagtgccaatttaggtgggctaatttagtttcttc 49262645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 51622526 - 51622599
Alignment:
Q  31 ggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    |||||||||| ||| || ||||||||||||||| ||||||| |||||||||| || |||  | |||||||||||    
T  51622526 ggagtgtgctcctcctcaaggtctcaggttcgactctctctggtgccaatttgggtgggccaatttagcttctt 51622599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 13901773 - 13901857
Alignment:
Q  21 ttgaggcctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||| |||||||||||| | ||| | ||||||||| |||| ||||| |||| ||  |||||||| |||||| ||||||||||||    
T  13901773 ttgagacctgggagtgtgttcctccttgaggtctcaagttcaattctatctaatgttaatttaggtgggttaatttagcttcttc 13901857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 17618312 - 17618396
Alignment:
Q  21 ttgaggcctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||| |||||||||||||| ||| ||||||||||| ||||| ||| |||  |  ||||||||||  || |||||||||||||||    
T  17618312 ttgagacctgggagtgtgctcctcctcgaggtctcatgttcgtttccctccggcaccaatttaggttggctagtttagcttcttc 17618396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 105
Target Start/End: Complemental strand, 49938853 - 49938797
Alignment:
Q  49 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||| ||||| ||||||  |||||||||||||||| |||||| ||||||||||||    
T  49938853 aggtcttaggtttgattcttcctagtgccaatttaggtgggttaatttagcttcttc 49938797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 58 - 105
Target Start/End: Complemental strand, 12793919 - 12793872
Alignment:
Q  58 gttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||||| ||||||||||||| ||| || ||||||||||||    
T  12793919 gttcgattctctctggtgccaatttaggtgggctaatttagcttcttc 12793872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 28 - 71
Target Start/End: Original strand, 12798722 - 12798765
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctct 71  Q
    ||||||||||||| ||| ||||||| ||||||||||||||||||    
T  12798722 ctgggagtgtgctgctcctcgaggtttcaggttcgattctctct 12798765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 110
Target Start/End: Complemental strand, 37980182 - 37980104
Alignment:
Q  31 ggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttcggaag 110  Q
    |||||||||| |||| | |||||||||||||||||||| | |||| ||||||  ||||| |||||| ||||||| |||||    
T  37980182 ggagtgtgctcctct-caaggtctcaggttcgattctccccagtgtcaatttcagcgggctagtttggcttctttggaag 37980104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 1730528 - 1730450
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||| ||||||||| |||||| | ||||||| ||| ||||||||| |||| |||||  | || ||||||||||||||||    
T  1730528 cctgagagtgtgctcctcttcaaagtctcagattctattctctctggtgctaatttgaggggattagtttagcttcttc 1730450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 105
Target Start/End: Original strand, 29195136 - 29195209
Alignment:
Q  31 ggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||| |||| | ||||| || ||||||||||||||| ||||||||| ||  || |||||||||||||||    
T  29195136 ggagtgtgctcctct-caaggtcgcaagttcgattctctctaatgccaattttggttggctagtttagcttcttc 29195209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 82
Target Start/End: Complemental strand, 34844905 - 34844871
Alignment:
Q  48 gaggtctcaggttcgattctctctagtgccaattt 82  Q
    |||||||||||||||||||||||| ||||||||||    
T  34844905 gaggtctcaggttcgattctctctggtgccaattt 34844871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 82
Target Start/End: Complemental strand, 40058999 - 40058965
Alignment:
Q  48 gaggtctcaggttcgattctctctagtgccaattt 82  Q
    |||||||||||||||||||||||| ||||||||||    
T  40058999 gaggtctcaggttcgattctctctggtgccaattt 40058965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 82
Target Start/End: Original strand, 49287908 - 49287942
Alignment:
Q  48 gaggtctcaggttcgattctctctagtgccaattt 82  Q
    |||||||||||||||||||||||| ||||||||||    
T  49287908 gaggtctcaggttcgattctctctggtgccaattt 49287942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 82
Target Start/End: Complemental strand, 9517787 - 9517754
Alignment:
Q  49 aggtctcaggttcgattctctctagtgccaattt 82  Q
    ||||||||||||||||||||||| ||||||||||    
T  9517787 aggtctcaggttcgattctctctggtgccaattt 9517754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 49576931 - 49576890
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctc 70  Q
    |||||||||||| ||| || ||||||||||||||||||||||    
T  49576931 tgggagtgtgctcctcctcaaggtctcaggttcgattctctc 49576890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 105
Target Start/End: Original strand, 50483071 - 50483120
Alignment:
Q  56 aggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||||||| ||| ||||||  | |||||||||||||||||||    
T  50483071 aggttcgattctctcttgtgacaatttcagggggttagtttagcttcttc 50483120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 82
Target Start/End: Complemental strand, 5609347 - 5609315
Alignment:
Q  50 ggtctcaggttcgattctctctagtgccaattt 82  Q
    |||||||||||||||||||||| ||||||||||    
T  5609347 ggtctcaggttcgattctctctggtgccaattt 5609315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 105
Target Start/End: Complemental strand, 9693515 - 9693459
Alignment:
Q  49 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||||||||| |||||||| |||||| || ||| || |||| |||||||    
T  9693515 aggtctcaggttcgattccctctagtgtcaatttgggtgggctaatttaccttcttc 9693459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 84
Target Start/End: Original strand, 12448770 - 12448802
Alignment:
Q  52 tctcaggttcgattctctctagtgccaatttag 84  Q
    |||||||||||||||||| ||||||||||||||    
T  12448770 tctcaggttcgattctctttagtgccaatttag 12448802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 68
Target Start/End: Original strand, 13215127 - 13215163
Alignment:
Q  32 gagtgtgcttctcttcgaggtctcaggttcgattctc 68  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  13215127 gagtgtgcttctcttcgaggtctcaagtttgattctc 13215163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 19238614 - 19238542
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagctt 101  Q
    |||||||||||| ||| |||||||||| |||||||||||| |  || ||||||| || ||| || ||||||||    
T  19238614 tgggagtgtgctcctcctcgaggtctcgggttcgattctccccggtaccaatttgggtgggctaatttagctt 19238542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 31759695 - 31759619
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||| ||| || ||||||||| ||||||||| ||| || |||||||    || ||||||||||||||||    
T  31759695 tgggagtgtgctcctcctcaaggtctcagattcgattctttctggtaccaatttgaagggattagtttagcttcttc 31759619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 40813356 - 40813280
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    ||||||||||||| || ||||| |||||||||||||| |||||  || |||||||| | |  ||| |||||||||||    
T  40813356 ctgggagtgtgctccttttcgaagtctcaggttcgatactctccggtaccaatttaagtgaattaatttagcttctt 40813280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 51948521 - 51948573
Alignment:
Q  31 ggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaattta 83  Q
    |||||||||  ||| |||||||||||||||| |||||||| |||| |||||||    
T  51948521 ggagtgtgcccctcctcgaggtctcaggttcaattctctccagtgtcaattta 51948573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 105
Target Start/End: Original strand, 51954153 - 51954229
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||| |||| ||| ||||||||||||||| |||| ||||  ||| |||||| || ||| || ||||||||||||    
T  51954153 tgggagtatgctcctcctcgaggtctcaggtttgattatctccggtgtcaatttgggtgggctaatttagcttcttc 51954229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 3e-20; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 47454652 - 47454578
Alignment:
Q  31 ggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||| ||| ||||||||||||||||||||||| | | |||||||||||| |||||||||||||||||||    
T  47454652 ggagtgtgctcctcctcgaggtctcaggttcgattctccccaatgccaatttaggtgggttagtttagcttcttc 47454578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 2667900 - 2667977
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||||  || |||||||||||||||||||| ||||||||| ||||||||| ||| |||||||||||||||    
T  2667900 ctgggagtgtgctcttcctcgaggtctcaggttcgattatctctagtgtcaatttaggtgggctagtttagcttcttc 2667977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 44743893 - 44743816
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||||||| ||| |||||||||||||||||||| |||| ||||||||||| || |||||| ||||||||||||    
T  44743893 ctgggagtgtgctcctcctcgaggtctcaggttcgattatctccagtgccaatttgggtgggttaatttagcttcttc 44743816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 28703442 - 28703366
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    ||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||  |  |||||||||||||||||    
T  28703442 ctgggagtgtgctcctcttcaaggtctcaggttcgattctctctggtgccaatttgaggaggttagtttagcttctt 28703366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 104
Target Start/End: Original strand, 36720420 - 36720495
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    |||||||||||| ||| ||||||| |||||||||||||||||||||| ||||||||| ||| | ||||||||||||    
T  36720420 tgggagtgtgctcctcctcgaggtttcaggttcgattctctctagtgtcaatttaggtgggctggtttagcttctt 36720495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 30311344 - 30311421
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||||||| ||| || ||||||||||||||||||||| | ||||||||||  | |||||||||||||||||||    
T  30311344 ctgggagtgtgctcctcctcaaggtctcaggttcgattctctttggtgccaatttgagggggttagtttagcttcttc 30311421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 52770021 - 52769944
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||||||| ||| | |||||||||||||||||||||| ||||| ||||||||| ||| || ||||||||||||    
T  52770021 ctgggagtgtgctcctccttgaggtctcaggttcgattctctttagtgtcaatttaggtgggctaatttagcttcttc 52769944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 105
Target Start/End: Complemental strand, 10969934 - 10969878
Alignment:
Q  49 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||    
T  10969934 aggtctcaggttcgattctctctggtgccaatttaagggggttagtttagcttcttc 10969878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 10445178 - 10445100
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||||| ||| |||||||||||||||||||||||||| |||| |||||  | ||| || ||||||||||||    
T  10445178 cctgggagtgtgctcctcctcgaggtctcaggttcgattctctctggtgctaatttgagtgggctaatttagcttcttc 10445100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 3427591 - 3427515
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||||||| ||| || ||||||||| ||||||||||||||||||||||||  ||  |||||||||||||||||    
T  3427591 ctgggagtgtgctcctcctcaaggtctcagattcgattctctctagtgccaatttgagc-agttagtttagcttcttc 3427515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 37788500 - 37788428
Alignment:
Q  31 ggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    |||||||||| ||| || |||||||||||||||||||||||||||||||||| |  |||||| |||||||||||    
T  37788500 ggagtgtgctcctcctcaaggtctcaggttcgattctctctagtgccaattt-gaggggttaatttagcttctt 37788428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 105
Target Start/End: Original strand, 14339649 - 14339725
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||| ||| || | |||||||||||||||||| |||||||||||| ||| ||| || ||||||||||||    
T  14339649 tgggagtgtgctcctcctcaatgtctcaggttcgattctccctagtgccaattaaggtgggctaatttagcttcttc 14339725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 105
Target Start/End: Original strand, 46552990 - 46553046
Alignment:
Q  49 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||| |||||||||||||||||||||||| || |||||||||||| ||||||    
T  46552990 aggtctcagattcgattctctctagtgccaatttgggtgggttagtttagtttcttc 46553046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 98
Target Start/End: Original strand, 53412982 - 53413053
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttag 98  Q
    |||||||||||||| ||| || ||||||||||||| ||||||||| ||||||||||  | ||||||||||||    
T  53412982 cctgggagtgtgctcctcctcaaggtctcaggttcaattctctctggtgccaatttgagggggttagtttag 53413053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 31 - 105
Target Start/End: Original strand, 40777054 - 40777127
Alignment:
Q  31 ggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||| |||| | |||||||||||| ||||||||||||||||||||| || ||| |||||||| ||||||    
T  40777054 ggagtgtgctcctct-caaggtctcaggtttgattctctctagtgccaatttcggtgggctagtttagtttcttc 40777127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 31 - 105
Target Start/End: Original strand, 44069799 - 44069873
Alignment:
Q  31 ggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||| ||| || |||||||||||| |||||| ||  ||||||||||||| ||| |||||||||||||||    
T  44069799 ggagtgtgctcctcctcaaggtctcaggtttgattctttccggtgccaatttaggtgggctagtttagcttcttc 44069873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 4844549 - 4844472
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||||||| ||| ||||||||||||| |||||||||||  ||||||||||  | ||| || ||||||||||||    
T  4844549 ctgggagtgtgctcctcctcgaggtctcaggatcgattctctccggtgccaatttgtgtgggctaatttagcttcttc 4844472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 4870245 - 4870168
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||||||| ||| ||||||||||||| |||||||||||  ||||||||||  | ||| || ||||||||||||    
T  4870245 ctgggagtgtgctcctcctcgaggtctcaggatcgattctctccggtgccaatttgtgtgggctaatttagcttcttc 4870168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 46518666 - 46518743
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||||||| ||| || |||| ||||||| ||||||||||  |||||||||  | |||||||||||||||||||    
T  46518666 ctgggagtgtgctcctcctcaaggtttcaggtttgattctctctgatgccaatttgagggggttagtttagcttcttc 46518743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 4222179 - 4222255
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    ||||||||||||| ||| || | |||| |||||||||||||||| ||| ||||||||| | ||||||||| ||||||    
T  4222179 ctgggagtgtgctcctcctcaaagtcttaggttcgattctctctggtgtcaatttaggtgagttagtttaacttctt 4222255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 8075164 - 8075088
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||| ||| || |||| ||||||||||||| |||||||| |||||| || ||| || ||||||||||||    
T  8075164 tgggagtgtgctcctcctcaaggtttcaggttcgattccctctagtgtcaatttgggtgggctaatttagcttcttc 8075088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 49 - 105
Target Start/End: Complemental strand, 11642226 - 11642170
Alignment:
Q  49 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||||||||||| ||| ||||| ||||||| | |||||||||||||||||||    
T  11642226 aggtctcaggttcgattatctttagtgtcaatttaagagggttagtttagcttcttc 11642170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 15048099 - 15048023
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    |||||| |||||| ||| || ||||||||||||||||| ||||| ||||||||||  | ||||||||||| ||||||    
T  15048099 ctgggaatgtgctcctcctcaaggtctcaggttcgattatctctggtgccaatttgagggggttagtttaacttctt 15048023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 27093398 - 27093323
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||| ||| || |||||||||||| |||||||||| |||||||||| |  ||||||||||| |||||||    
T  27093398 tgggagtgtgctcctcctcaaggtctcaggtttgattctctctggtgccaattt-gaagggttagtttatcttcttc 27093323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 39253735 - 39253787
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaat 80  Q
    ||||||||||||| |||||| |||||||||||||||||||||||  |||||||    
T  39253735 ctgggagtgtgctcctcttcaaggtctcaggttcgattctctctgatgccaat 39253787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 19154662 - 19154745
Alignment:
Q  21 ttgaggcctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    |||||||||| ||||||||| ||| |  ||||||||||||||||||||| |  || |||||| || |||||||||||| |||||    
T  19154662 ttgaggcctgagagtgtgctcctcctaaaggtctcaggttcgattctctttgatgtcaatttgggtgggttagtttagtttctt 19154745  T

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Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 8051251 - 8051329
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||| ||| |||||||| ||||||||||| ||||||||| |||  ||||||||||||  ||| | |||||||||||||    
T  8051251 cctggcagtatgcttctcctcgaggtctcaagttcgattccctccggtgccaatttagttgggctcgtttagcttcttc 8051329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 27259198 - 27259276
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||||| ||| ||||||| ||||||| ||||||||||  || ||||||  | |||||||||| ||||||||    
T  27259198 cctgggagtgtgctcctcctcgaggtttcaggtttgattctctctgatgtcaatttgagggggttagttttgcttcttc 27259276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 32651477 - 32651407
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagttta 97  Q
    |||||||||||||| ||| || || |||||| ||||||||||||||||| ||||||||  ||| |||||||    
T  32651477 cctgggagtgtgctcctcctcaagatctcagattcgattctctctagtgtcaatttagatgggctagttta 32651407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 105
Target Start/End: Original strand, 40063678 - 40063735
Alignment:
Q  49 aggtctcaggttcgattctctctagtgccaattt-aggcgggttagtttagcttcttc 105  Q
    |||||||| ||||||||||||| ||||||||||| ||| || ||||||||||||||||    
T  40063678 aggtctcaagttcgattctctccagtgccaatttgagggggtttagtttagcttcttc 40063735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 51903916 - 51903839
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||||||| ||| ||| |||||||||||||||||||||  ||| ||||||  | ||| || ||||||||||||    
T  51903916 ctgggagtgtgctcctcctcgtggtctcaggttcgattctctccggtgtcaatttgagtgggctaatttagcttcttc 51903839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 105
Target Start/End: Original strand, 40268547 - 40268603
Alignment:
Q  49 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||||||||||| |   ||||||||| || |||||||||||||||||||    
T  40268547 aggtctcaggttcgattctccccgatgccaatttcggtgggttagtttagcttcttc 40268603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 16354931 - 16354855
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||| ||||||||| ||| ||  |||||||||||||||||||||| ||||||| |||   ||| |||||||||||||||    
T  16354931 cctgtgagtgtgctcctcctcagggtctcaggttcgattctctctggtgccaaatta--aggggtagtttagcttcttc 16354855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 20501733 - 20501788
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaattt 82  Q
    |||| ||||||||| ||| |  |||||||||||||||||||||| |||||||||||    
T  20501733 cctgagagtgtgctcctccttaaggtctcaggttcgattctctccagtgccaattt 20501788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 28 - 71
Target Start/End: Original strand, 29563938 - 29563981
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctct 71  Q
    |||| |||||||||||| |||| |||||||||||||||||||||    
T  29563938 ctggaagtgtgcttctcctcgaagtctcaggttcgattctctct 29563981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 30510219 - 30510164
Alignment:
Q  46 tcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagctt 101  Q
    |||||||||||||||||||||||||||||| |||| || | ||| || ||||||||    
T  30510219 tcgaggtctcaggttcgattctctctagtgtcaatctaagtgggctaatttagctt 30510164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 32638983 - 32639038
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaattta 83  Q
    ||||||||||| |  ||||||||||||||||||||||| |||| |||| |||||||    
T  32638983 ctgggagtgtgttcatcttcgaggtctcaggttcgattttctccagtgtcaattta 32639038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 12761549 - 12761627
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||| | ||| | ||| |||||||||||||| || |  ||||||||||||| ||| |||||| ||||||||    
T  12761549 cctgggagtgtgttcctccttgagctctcaggttcgattttccccggtgccaatttaggtgggctagttttgcttcttc 12761627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 85
Target Start/End: Original strand, 14186688 - 14186742
Alignment:
Q  31 ggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttagg 85  Q
    |||||||||| ||| || ||||||||||||||||||||||  ||| |||||||||    
T  14186688 ggagtgtgctcctcctcaaggtctcaggttcgattctctccggtgtcaatttagg 14186742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 82
Target Start/End: Complemental strand, 15566646 - 15566612
Alignment:
Q  48 gaggtctcaggttcgattctctctagtgccaattt 82  Q
    ||||||||||||||||||| |||||||||||||||    
T  15566646 gaggtctcaggttcgattccctctagtgccaattt 15566612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 82
Target Start/End: Complemental strand, 25289861 - 25289827
Alignment:
Q  48 gaggtctcaggttcgattctctctagtgccaattt 82  Q
    ||||||||||||||||||| |||||||||||||||    
T  25289861 gaggtctcaggttcgattccctctagtgccaattt 25289827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 31520643 - 31520589
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaattt 82  Q
    ||||||||||||| ||| ||||||||| ||||| ||||||||| |||| ||||||    
T  31520643 ctgggagtgtgctcctcctcgaggtcttaggtttgattctctccagtgtcaattt 31520589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 35111208 - 35111266
Alignment:
Q  18 gatttgaggcctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgc 76  Q
    |||||||| ||||||||||||||  || ||||||||||| |||||||| || |||||||    
T  35111208 gatttgagacctgggagtgtgctcatcctcgaggtctcatgttcgattttccctagtgc 35111266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 82
Target Start/End: Complemental strand, 49258409 - 49258375
Alignment:
Q  48 gaggtctcaggttcgattctctctagtgccaattt 82  Q
    ||||||||||||||||||| |||||||||||||||    
T  49258409 gaggtctcaggttcgattccctctagtgccaattt 49258375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 2709415 - 2709492
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||| ||| |||| ||| ||||||| | ||||| ||||||||||  ||||||||| || | |||||||||||||||||    
T  2709415 ctggaagtatgctcctcctcgaggttttaggtttgattctctctgatgccaatttgggtgagttagtttagcttcttc 2709492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 13808923 - 13808846
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||| |||||||| ||| || ||||||||||||| |||||||||| || |||||| |  || ||| ||||||||||||    
T  13808923 ctggcagtgtgctcctcctctaggtctcaggttcaattctctctaatgtcaatttggatggattaatttagcttcttc 13808846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 33899653 - 33899706
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaattt 82  Q
    |||||||||||| ||| || ||||||||||||||||||||| | ||| ||||||    
T  33899653 tgggagtgtgctcctcctctaggtctcaggttcgattctctttggtgtcaattt 33899706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 49397578 - 49397502
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctag-tgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||||||| ||||||||||| |||||||| ||| ||| || ||||||||| ||  || ||||||||||||    
T  49397578 tgggagtgtgcttctcctcgaggtctcatgttcgattatct-tagatgtcaatttaggtggactaatttagcttcttc 49397502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 11090203 - 11090127
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    |||||| |||||| ||| ||||||||| || ||||||||| || |||| ||||||| |  ||||| |||||||||||    
T  11090203 ctgggaatgtgctcctcctcgaggtcttagtttcgattctttcgagtgtcaatttaagtaggttaatttagcttctt 11090127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 105
Target Start/End: Original strand, 30195009 - 30195084
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||||||  || ||||||||| || ||| ||||||| |||||  ||||||||||||||| |||||| |||||    
T  30195009 tgggagtgtgctcatcctcgaggtcttagattcaattctct-tagtgttaatttaggcgggttaatttagcatcttc 30195084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 31608562 - 31608506
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttag 84  Q
    ||||||||||||| ||| |||||||||||| || |||||||||| | || |||||||    
T  31608562 ctgggagtgtgctcctcctcgaggtctcagatttgattctctctggggctaatttag 31608506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 47237007 - 47236955
Alignment:
Q  30 gggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaattt 82  Q
    ||||||||||| |||||| |||||||| ||||||||||| |  ||||||||||    
T  47237007 gggagtgtgctcctcttcaaggtctcatgttcgattctccccggtgccaattt 47236955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 2799900 - 2799977
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||||||| ||| || ||||||||||||||||||||||| ||||||||||  | |||||||||||||||||||    
T  2799900 ctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttgagggggttagtttagcttcttc 2799977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 40810505 - 40810582
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||||| | |||||| ||||||||||||||||||||||| ||||||||||  | |||||||||||||||||||    
T  40810505 ctgggagtgtgttcctcttcaaggtctcaggttcgattctctctggtgccaatttgagagggttagtttagcttcttc 40810582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 33700811 - 33700735
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    ||||||||||||| ||| || ||||||||||||||||||||||| ||||||||||| | ||||||||||| ||||||    
T  33700811 ctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttaagggggttagtttaacttctt 33700735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 8177220 - 8177143
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||||||| ||| || |||| |||||||||||||||||| ||||||||||  | |||||||||||||||||||    
T  8177220 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctctggtgccaatttgagggggttagtttagcttcttc 8177143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 105
Target Start/End: Original strand, 29753708 - 29753764
Alignment:
Q  49 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||    
T  29753708 aggtctcaggttcgattctctctggtgccaatttaagagggttagtttagcttcttc 29753764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 44126432 - 44126510
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||||| |||  ||||||||||| || ||||||||||||||||||||||||  || || ||||||||||||    
T  44126432 cctgggagtgtgctcctccacgaggtctcagatttgattctctctagtgccaatttaggtaggctaatttagcttcttc 44126510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 35 - 104
Target Start/End: Original strand, 3799951 - 3800020
Alignment:
Q  35 tgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    |||||| ||| |||| || |||||||||||||||||||||||||||||||| ||| || |||||||||||    
T  3799951 tgtgctcctcctcgaagtttcaggttcgattctctctagtgccaatttaggtgggctaatttagcttctt 3800020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 36371507 - 36371584
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    |||||||||||||| ||| || |||||| ||||||||||||||||  |||||||||  | ||||||||||||||||||    
T  36371507 cctgggagtgtgctcctcctcaaggtctgaggttcgattctctctgatgccaatttgagggggttagtttagcttctt 36371584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 105
Target Start/End: Original strand, 6122833 - 6122909
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||| ||| || |||||||||||||||||| |||||||| |||||| || ||| || ||||||||||||    
T  6122833 tgggagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttgggtgggctaatttagcttcttc 6122909  T

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Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 14787381 - 14787297
Alignment:
Q  21 ttgaggcctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||| |||| ||||||| ||||| || |||| ||||||||||||||||||| |  ||||||| | |||||||||||||||||||    
T  14787381 ttgagacctgagagtgtgtttctcctcaaggtgtcaggttcgattctctctaatatcaatttaagtgggttagtttagcttcttc 14787297  T

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Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 21547517 - 21547441
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||| ||||| ||| ||||||| ||||||||||||||||||  |||||||||||| ||| ||||||| |||||||    
T  21547517 tgggagggtgctcctcctcgaggtttcaggttcgattctctctgatgccaatttaggtgggctagtttaacttcttc 21547441  T

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Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 6650635 - 6650710
Alignment:
Q  30 gggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||| |||| ||| || | ||||||||||||||||||||| ||| ||||||||| || ||||||||||||||||    
T  6650635 gggagtatgctcctcctcaatgtctcaggttcgattctctctggtgtcaatttaggtggattagtttagcttcttc 6650710  T

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Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 4566585 - 4566662
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||||| ||| ||  ||||||||||||||||||||||  || ||||||| | |||||||||||||||||||    
T  4566585 cctgggagtgtgctcctcctcagggtctcaggttcgattctctctgatgtcaatttaag-gggttagtttagcttcttc 4566662  T

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Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 105
Target Start/End: Original strand, 12587312 - 12587384
Alignment:
Q  32 gagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||| ||| |||||||||||||||||||||||||  ||| ||||||||| ||| || ||||||||||||    
T  12587312 gagtgtgctcctcctcgaggtctcaggttcgattctctccggtg-caatttaggtgggctaatttagcttcttc 12587384  T

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Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 50901619 - 50901695
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    ||||| |||||||| ||| |||||||||||  |||||||||||| |||||||||||||| ||| || |||||||||||    
T  50901619 cctggtagtgtgctcctcctcgaggtctcaaattcgattctctc-agtgccaatttaggtgggctaatttagcttctt 50901695  T

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Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 49 - 105
Target Start/End: Original strand, 11063615 - 11063671
Alignment:
Q  49 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||| |||||||||||||||||||||||||||    |||||||||||||||||||    
T  11063615 aggtcttaggttcgattctctctagtgccaatttgaaggggttagtttagcttcttc 11063671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 18037650 - 18037574
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||| || |||||| ||||| |||||||||||||  ||||| ||||||| ||| || ||||||||||||    
T  18037650 tgggagtgtgctccttttcgagatctcaagttcgattctctccggtgccgatttaggtgggctaatttagcttcttc 18037574  T

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Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 40257430 - 40257514
Alignment:
Q  21 ttgaggcctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||| |||||||||||||| ||| ||||||||||| |||| ||||| ||  ||| |||||| || ||| |||||||||||||||    
T  40257430 ttgagacctgggagtgtgctcctcctcgaggtctcaagttcaattctatccggtgtcaatttgggtgggctagtttagcttcttc 40257514  T

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Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 44961807 - 44961879
Alignment:
Q  32 gagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    ||||||||| ||| ||  |||||||||||||||||||||||||| |||||| || ||| || |||||||||||    
T  44961807 gagtgtgctcctcctcagggtctcaggttcgattctctctagtgtcaatttgggtgggctaatttagcttctt 44961879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 105
Target Start/End: Complemental strand, 17745288 - 17745218
Alignment:
Q  34 gtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||| ||| ||||||||||| |||||||||||||| ||| |||||||||  ||||| ||||||||||||    
T  17745288 gtgtgctcctcctcgaggtctcatgttcgattctctctggtgtcaatttagg-tggttaatttagcttcttc 17745218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 104
Target Start/End: Complemental strand, 52116818 - 52116743
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    |||||||||||| ||| || | ||||||||||| |||||| |||||||||||| ||| ||| || |||||||||||    
T  52116818 tgggagtgtgctcctcctcaatgtctcaggttcaattctccctagtgccaattaaggtgggctaatttagcttctt 52116743  T

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Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 1247141 - 1247227
Alignment:
Q  18 gatttgaggcctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    |||||||  ||||||||||| || ||| || ||||||||||||||||||||||| || |||||||    |||||| |||||||||||    
T  1247141 gatttgaaacctgggagtgtactcctcctcaaggtctcaggttcgattctctctggtaccaatttgaaggggttattttagcttctt 1247227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 83
Target Start/End: Original strand, 2220015 - 2220065
Alignment:
Q  33 agtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaattta 83  Q
    |||||||||||| ||||||||||||||||||||||||| | || |||||||    
T  2220015 agtgtgcttctcctcgaggtctcaggttcgattctctccaatgtcaattta 2220065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 102
Target Start/End: Original strand, 8904456 - 8904526
Alignment:
Q  32 gagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttc 102  Q
    ||||||||| ||| || |||||||| |||||||||||||| ||||||||||  | ||||||||||| ||||    
T  8904456 gagtgtgctcctcctcaaggtctcaagttcgattctctctggtgccaatttgagggggttagtttaacttc 8904526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 9165234 - 9165156
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||||| ||| || | ||||||||||| ||||||||| ||||||||||  | |||||| ||||| ||||||    
T  9165234 cctgggagtgtgctcctcctcaaagtctcaggttcaattctctctggtgccaatttgagggggttactttagtttcttc 9165156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 10526860 - 10526938
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||| |||| ||| || ||||||||| ||||||||||||| | | |||||| || |||||| ||||||||||||    
T  10526860 cctgggagtttgctcctcctcaaggtctcagattcgattctctctggagtcaatttgggtgggttaatttagcttcttc 10526938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 3265963 - 3266016
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaattt 82  Q
    |||||||||||| ||| || ||||||||||||||||||||||| || |||||||    
T  3265963 tgggagtgtgctcctcctcaaggtctcaggttcgattctctctggttccaattt 3266016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 85
Target Start/End: Original strand, 17439955 - 17440012
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttagg 85  Q
    ||||||||||||| ||| ||||||||||| ||| ||||||||| |||| |||||||||    
T  17439955 ctgggagtgtgctcctcctcgaggtctcatgtttgattctctccagtgtcaatttagg 17440012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 27476806 - 27476733
Alignment:
Q  31 ggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    |||||||||| ||| ||||| ||||| ||| |||||||||| ||||| ||||||| ||| || |||||||||||    
T  27476806 ggagtgtgctcctcctcgagatctcaagtttgattctctctggtgccgatttaggtgggctaatttagcttctt 27476733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 51814536 - 51814605
Alignment:
Q  32 gagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagctt 101  Q
    ||||||||| ||| || ||||||||||||||||||||||  |||||||||| || ||| || ||||||||    
T  51814536 gagtgtgctcctcctcaaggtctcaggttcgattctctccggtgccaatttgggtgggctaatttagctt 51814605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 12662325 - 12662377
Alignment:
Q  33 agtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttagg 85  Q
    |||||||| ||| |||| ||||||||||||||| |||||| ||||||||||||    
T  12662325 agtgtgctcctcctcgatgtctcaggttcgattatctctaatgccaatttagg 12662377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 24047139 - 24047083
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttagg 85  Q
    |||||||||||| ||| ||||||| ||| ||||||||||| | ||||||||||||||    
T  24047139 tgggagtgtgctcctcctcgaggtttcaagttcgattctccccagtgccaatttagg 24047083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 57 - 104
Target Start/End: Complemental strand, 3679323 - 3679276
Alignment:
Q  57 ggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    ||||||||||||||| ||||||||||  | ||||||||||||||||||    
T  3679323 ggttcgattctctctggtgccaatttgagggggttagtttagcttctt 3679276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 25237152 - 25237102
Alignment:
Q  31 ggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaattt 82  Q
    ||||| ||||||||| | |||||||||||||||||| |||||||||||||||    
T  25237152 ggagtttgcttctct-caaggtctcaggttcgattccctctagtgccaattt 25237102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 28411372 - 28411423
Alignment:
Q  32 gagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaattta 83  Q
    ||||||||| ||||| |||||||||| ||| ||||||||| |||||||||||    
T  28411372 gagtgtgctcctctttgaggtctcagattcaattctctctggtgccaattta 28411423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 35699990 - 35700068
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcagg--ttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    |||| |||||||||||  || ||||||||||  ||||||||||||| ||| ||||||| | ||||| ||||||||||||    
T  35699990 ctggaagtgtgcttctgctcaaggtctcaggggttcgattctctctggtgtcaatttaagggggttggtttagcttctt 35700068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 1094562 - 1094640
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||| ||||||||| |||  ||||||||||  ||||||||||||  ||||||||||||| ||| || |||| |||||||    
T  1094562 cctgtgagtgtgctcctccacgaggtctcaaattcgattctctccggtgccaatttaggtgggctaatttaacttcttc 1094640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 82
Target Start/End: Original strand, 8077697 - 8077731
Alignment:
Q  48 gaggtctcaggttcgattctctctagtgccaattt 82  Q
    |||||||||||||||||||||||| ||||||||||    
T  8077697 gaggtctcaggttcgattctctctggtgccaattt 8077731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 82
Target Start/End: Complemental strand, 9500502 - 9500468
Alignment:
Q  48 gaggtctcaggttcgattctctctagtgccaattt 82  Q
    |||||||||||||||||||||||| ||||||||||    
T  9500502 gaggtctcaggttcgattctctctggtgccaattt 9500468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 82
Target Start/End: Complemental strand, 15059549 - 15059515
Alignment:
Q  48 gaggtctcaggttcgattctctctagtgccaattt 82  Q
    |||||||||||||||||||||||| ||||||||||    
T  15059549 gaggtctcaggttcgattctctctggtgccaattt 15059515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 15786358 - 15786304
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaattt 82  Q
    ||||||||||||| ||| || ||||||||||||||||||||| | ||| ||||||    
T  15786358 ctgggagtgtgctcctcctcaaggtctcaggttcgattctctttggtgtcaattt 15786304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 82
Target Start/End: Original strand, 18646903 - 18646937
Alignment:
Q  48 gaggtctcaggttcgattctctctagtgccaattt 82  Q
    |||||||||||||||||||||||| ||||||||||    
T  18646903 gaggtctcaggttcgattctctctggtgccaattt 18646937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 19940907 - 19940833
Alignment:
Q  31 ggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||| ||| |  |||||||||||| |||||||||  ||||||||||| | ||| | |||||||||||||    
T  19940907 ggagtgtgctcctccttaaggtctcaggtttgattctctccggtgccaatttatgtgggctggtttagcttcttc 19940833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 23745187 - 23745237
Alignment:
Q  55 caggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||||||||||||||||||||||  | ||| |||||| ||||||||    
T  23745187 caggttcgattctctctagtgccaatttcagtgggctagtttggcttcttc 23745237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 101
Target Start/End: Complemental strand, 40814443 - 40814373
Alignment:
Q  31 ggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagctt 101  Q
    ||||||||||  || | ||||| |||||||||||||||||||||| ||||||| | ||| || ||||||||    
T  40814443 ggagtgtgctcatccttgaggtttcaggttcgattctctctagtgtcaatttaagtgggctaatttagctt 40814373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 7219952 - 7219879
Alignment:
Q  32 gagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||| ||| |||| ||||||||||||||||||| |  | |||||||||| ||  || ||||||||||||    
T  7219952 gagtgtgctcctcctcgaagtctcaggttcgattctctttgataccaatttaggtggactaatttagcttcttc 7219879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 27223168 - 27223091
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||||  ||||| |||||||||||||||||||| | | | | |||||| | |||||| ||||| ||||||    
T  27223168 ctgggagtgtgctcttcttcaaggtctcaggttcgattctccccaatactaatttaagtgggttaatttagtttcttc 27223091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 32524378 - 32524439
Alignment:
Q  37 tgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttag 98  Q
    |||| |||||| || ||||| |||||||||||||| ||||||||||  | ||||||||||||    
T  32524378 tgctcctcttcaagatctcaagttcgattctctctggtgccaatttgagggggttagtttag 32524439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 51703817 - 51703890
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagctt 101  Q
    ||||||||||||| ||| || | || |||||||||||||||||| ||  ||||||| |  ||||||||||||||    
T  51703817 ctgggagtgtgctcctcctcaaagtttcaggttcgattctctctggtatcaatttaagacggttagtttagctt 51703890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 105
Target Start/End: Original strand, 16893433 - 16893509
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||| || ||| |||||||||||||||||||| ||||  ||| ||||||  | ||| || ||||||||||||    
T  16893433 tgggagtgtactcctcctcgaggtctcaggttcgattttctccggtgtcaatttgagtgggctaatttagcttcttc 16893509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 105
Target Start/End: Complemental strand, 31605881 - 31605809
Alignment:
Q  33 agtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||| ||| || |||||||| ||||||||||| |  |||||||||| || ||| ||||||||| |||||    
T  31605881 agtgtgctcctcctcaaggtctcaagttcgattctccccggtgccaatttgggtgggctagtttagcctcttc 31605809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 5e-19; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 25 - 105
Target Start/End: Complemental strand, 11306215 - 11306135
Alignment:
Q  25 ggcctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||||| ||||  ||||| ||||||||||||||||||||||| ||||||||||  | |||||||||||||||||||    
T  11306215 ggcctgggagtatgctcatcttcaaggtctcaggttcgattctctctggtgccaatttgagggggttagtttagcttcttc 11306135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 12188342 - 12188264
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||||| ||| || |||| ||| |||||||||||||||||||||||||  | |||||||||||||||||||    
T  12188342 cctgggagtgtgctcctcctcaaggtttcaagttcgattctctctagtgccaatttgagggggttagtttagcttcttc 12188264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 30127438 - 30127512
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttc 102  Q
    ||||||||||||| |||||||||||||||||||||||||| ||  |||||||||||||  ||||| |||||||||    
T  30127438 ctgggagtgtgctcctcttcgaggtctcaggttcgattctttccggtgccaatttaggtaggttaatttagcttc 30127512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 33549141 - 33549218
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    |||||||||||||| ||| |||||||||||||||||||||||||   |||||||||||| | | || |||||||||||    
T  33549141 cctgggagtgtgctcctcctcgaggtctcaggttcgattctctcggatgccaatttaggtgagctaatttagcttctt 33549218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 3715490 - 3715566
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    |||||||| |||||||| ||||||||||| ||||||||||||| |||| ||||||||| ||| |  |||||||||||    
T  3715490 ctgggagtatgcttctcgtcgaggtctcaagttcgattctctccagtgtcaatttaggtgggctgatttagcttctt 3715566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 20213078 - 20213156
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||||| ||| || | |||||||||||||||| |||||||| |||||| || ||| || ||||||||||||    
T  20213078 cctgggagtgtgctcctcctcaatgtctcaggttcgattccctctagtgtcaatttgggtgggctaatttagcttcttc 20213156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 22107101 - 22107179
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||||| ||| || | |||||||||||||||| |||||||| |||||| || ||| || ||||||||||||    
T  22107101 cctgggagtgtgctcctcctcaatgtctcaggttcgattccctctagtgtcaatttgggtgggctaatttagcttcttc 22107179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 12234546 - 12234469
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    |||||||||||||| |   ||||||||||||||||||||||||| |||| ||||||||  ||| || |||||||||||    
T  12234546 cctgggagtgtgctccctctcgaggtctcaggttcgattctctccagtgtcaatttagatgggataatttagcttctt 12234469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 9583408 - 9583479
Alignment:
Q  32 gagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    ||||||||| |||| | |||||||  |||||||||||||| |||||||||| || ||||||||||||||||||    
T  9583408 gagtgtgctcctct-caaggtctccagttcgattctctctggtgccaatttcggtgggttagtttagcttctt 9583479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 29 - 105
Target Start/End: Original strand, 21418509 - 21418585
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||| ||| || | |||||| ||||||||||| |||||||||||| ||| ||| || ||||||||||||    
T  21418509 tgggagtgtgctcctcctccatgtctcaagttcgattctccctagtgccaattaaggtgggctaatttagcttcttc 21418585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 49 - 105
Target Start/End: Complemental strand, 24256839 - 24256783
Alignment:
Q  49 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||| |||||||||||||| ||| |||||||||  ||||||||||||||||||    
T  24256839 aggtctcaagttcgattctctctggtgtcaatttaggtaggttagtttagcttcttc 24256783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 13330146 - 13330201
Alignment:
Q  49 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    ||||||||| ||||||||||||| ||||||||||  | ||||||||||||||||||    
T  13330146 aggtctcagattcgattctctcttgtgccaatttgagagggttagtttagcttctt 13330201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 104
Target Start/End: Complemental strand, 15951339 - 15951264
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    |||||||||||| ||| || |||||||| |||| ||||||||| || |||||||  | ||||||||||||||||||    
T  15951339 tgggagtgtgctcctcctcaaggtctcatgttcaattctctctggtaccaatttgagagggttagtttagcttctt 15951264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 23910150 - 23910074
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||||| ||| || |||||||||||||||   ||||| ||||||||||  | |||||||||||||||||||    
T  23910150 cctgggagtgtgctcctcctcaaggtctcaggttcga--atctctggtgccaatttgagggggttagtttagcttcttc 23910074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 85
Target Start/End: Complemental strand, 1909855 - 1909801
Alignment:
Q  31 ggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttagg 85  Q
    ||||||||||| | ||||||||||||||||| |||||||||||| | ||||||||    
T  1909855 ggagtgtgcttattttcgaggtctcaggttcaattctctctagtactaatttagg 1909801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 16405122 - 16405180
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttagg 85  Q
    |||||||||||||||||| |||||||||||| |||||||||| |  ||| |||||||||    
T  16405122 cctgggagtgtgcttctcctcgaggtctcagtttcgattctcacctgtgtcaatttagg 16405180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 11423605 - 11423658
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaattt 82  Q
    ||||||| |||||||| |||||||||||||||||||| |||| |||| ||||||    
T  11423605 tgggagtatgcttctcctcgaggtctcaggttcgattttctccagtgtcaattt 11423658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 18263898 - 18263955
Alignment:
Q  48 gaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||| |||||||||||||| | |||||||||||||| ||| || ||||||||||||    
T  18263898 gaggtcccaggttcgattctccccagtgccaatttaggtgggctaatttagcttcttc 18263955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 6758459 - 6758383
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||| | | ||||||||||| | |||||||||||| ||| ||||||||| |||  | ||||||||||||    
T  6758459 tgggagtgtgctccacctcgaggtctcaagatcgattctctctggtgtcaatttaggtgggcaaatttagcttcttc 6758383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 105
Target Start/End: Original strand, 12633048 - 12633124
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||| ||||||||| ||||| ||||||||||||| | || ||||||| | ||  || ||||||||||||    
T  12633048 tgggagtgtgctcctcttcgagatctcatgttcgattctctccaatgtcaatttaagtggactaatttagcttcttc 12633124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 58 - 105
Target Start/End: Complemental strand, 1056693 - 1056646
Alignment:
Q  58 gttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||||| ||||||| ||||| |||||| ||||||||||||    
T  1056693 gttcgattctctctggtgccaagttaggtgggttaatttagcttcttc 1056646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 82
Target Start/End: Original strand, 11448921 - 11448955
Alignment:
Q  48 gaggtctcaggttcgattctctctagtgccaattt 82  Q
    |||||||||||||||||||||||| ||||||||||    
T  11448921 gaggtctcaggttcgattctctctggtgccaattt 11448955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 31623030 - 31622952
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||||| ||| ||||||||||||||| || || |||  ||| |||||| || ||| || ||||||||||||    
T  31623030 cctgggagtgtgctcctcctcgaggtctcaggtttgaatcactccggtgtcaatttgggtgggctaatttagcttcttc 31622952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 104
Target Start/End: Complemental strand, 32250866 - 32250812
Alignment:
Q  50 ggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    |||||||||||||||||||||  ||| ||||||| | |||||| |||||||||||    
T  32250866 ggtctcaggttcgattctctccggtgacaatttaagtgggttaatttagcttctt 32250812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 68
Target Start/End: Original strand, 346571 - 346608
Alignment:
Q  31 ggagtgtgcttctcttcgaggtctcaggttcgattctc 68  Q
    |||||||||||||| ||||||||||| |||||||||||    
T  346571 ggagtgtgcttctcctcgaggtctcatgttcgattctc 346608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 6385899 - 6385976
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    ||||||| |||||| ||| |  ||||||||||||||||||||||  |||| ||||| || ||| || |||||||||||    
T  6385899 cctgggactgtgctcctccttaaggtctcaggttcgattctctccggtgctaatttgggtgggctaatttagcttctt 6385976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 24641228 - 24641151
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||||||| ||| ||||||| | |||||||||||||   | |||||||||||| ||| || |||| |||||||    
T  24641228 ctgggagtgtgctcctcctcgaggtttaaggttcgattctcctcactgccaatttaggtgggctaatttaacttcttc 24641151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 1992285 - 1992209
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    ||||||||||| |  |||||||  ||| | |||||||||||||||||| ||||||||| | | || |||||||||||    
T  1992285 ctgggagtgtgttcttcttcgaaatcttatgttcgattctctctagtgtcaatttaggtgtgctaatttagcttctt 1992209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 105
Target Start/End: Complemental strand, 8597764 - 8597708
Alignment:
Q  49 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||| |||| |||||||| ||||||||||| || ||| || ||||||||||||    
T  8597764 aggtctcaagttcaattctctccagtgccaatttgggtgggctaatttagcttcttc 8597708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 9239025 - 9239069
Alignment:
Q  48 gaggtctcaggttcgattctctctagtgccaatttaggcgggtta 92  Q
    ||||||||||||||||||| |||| |||||||||| || ||||||    
T  9239025 gaggtctcaggttcgattccctctggtgccaatttcggtgggtta 9239069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 18562675 - 18562599
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||| ||| | ||| | ||||||| ||||||| | ||| |||||||||| ||| || ||||||||||||    
T  18562675 tgggagtgtgctcctccttgagatttcaggtttgattctcccaagtaccaatttaggtgggctaatttagcttcttc 18562599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 70
Target Start/End: Original strand, 19162823 - 19162863
Alignment:
Q  30 gggagtgtgcttctcttcgaggtctcaggttcgattctctc 70  Q
    ||||||||||| ||| ||||| |||||||||||||||||||    
T  19162823 gggagtgtgctcctcctcgagatctcaggttcgattctctc 19162863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 20863416 - 20863480
Alignment:
Q  31 ggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtt 95  Q
    |||||||||| ||| || ||||||||| || ||||||||||| ||||||||| || ||| |||||    
T  20863416 ggagtgtgctcctcctcaaggtctcagatttgattctctctaatgccaatttgggtgggctagtt 20863480  T

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Target: scaffold0258 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 15362 - 15284
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||||| ||| |||||||||||||||||||||||||   |||||||||||| ||| || ||||||||||||    
T  15362 cctgggagtgtgctcctcctcgaggtctcaggttcgattctctcggatgccaatttaggtgggctaatttagcttcttc 15284  T

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Target: chr7 (Bit Score: 47; Significance: 8e-18; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 35 - 105
Target Start/End: Original strand, 21558173 - 21558243
Alignment:
Q  35 tgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||| ||| || ||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||    
T  21558173 tgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttaggtgggttaatttagcttcttc 21558243  T

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Target: chr7; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 26459449 - 26459371
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||||| ||| || ||||||||||||||||||||||| ||||||||||    |||||||||||||||||||    
T  26459449 cctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttgaaggggttagtttagcttcttc 26459371  T

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Target: chr7; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 54 - 105
Target Start/End: Complemental strand, 42261057 - 42261006
Alignment:
Q  54 tcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  42261057 tcaggtttgattctctctagtgccaatttaggtgggttagtttagcttcttc 42261006  T

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Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 17113832 - 17113910
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||||||||| || |||||||| ||||||||||||||  ||| |||||  | |||||||||||||||||||    
T  17113832 cctgggagtgtgcttctcctcaaggtctcaagttcgattctctctgatgctaatttgagggggttagtttagcttcttc 17113910  T

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Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 39631881 - 39631959
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||  ||| ||| || ||||||||||||||||||||||| ||||||||||  | |||||||||||||||||||    
T  39631881 cctgggagtaagctcctcctcaaggtctcaggttcgattctctcttgtgccaatttgagggggttagtttagcttcttc 39631959  T

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Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 17041050 - 17040973
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||| |||||||| ||| || |||||||||||||||||||||| ||||||||||| || |||| | ||||||||||||    
T  17041050 ctggaagtgtgctcctcctcaaggtctcaggttcgattctctcaagtgccaatttgggtgggtcaatttagcttcttc 17040973  T

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Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 31835233 - 31835306
Alignment:
Q  31 ggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    |||||||||| ||| || ||||||||||||||||| || || |||||||||| |||||| ||||||||||||||    
T  31835233 ggagtgtgctcctcctcaaggtctcaggttcgattatccctggtgccaattttggcgggctagtttagcttctt 31835306  T

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Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 43215225 - 43215298
Alignment:
Q  31 ggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    |||||||||| ||| || |||||||||||||||||||||||  |||||||||  | ||||||||||||||||||    
T  43215225 ggagtgtgctcctcctcaaggtctcaggttcgattctctcttatgccaatttgagggggttagtttagcttctt 43215298  T

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Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 105
Target Start/End: Original strand, 18363735 - 18363810
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||| ||| || |||||||||||| ||||||||||||| ||||||| |  |||||||||||||||||||    
T  18363735 tgggagtgtgctcctcctcaaggtctcaggtttgattctctctagtaccaattt-gaggggttagtttagcttcttc 18363810  T

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Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 30579366 - 30579450
Alignment:
Q  21 ttgaggcctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||| ||||||||||| |  ||| || ||||||||||||||||| ||||| ||||||||||||| ||| || ||||||||||||    
T  30579366 ttgagacctgggagtgtccacctcctcaaggtctcaggttcgattttctctggtgccaatttaggtgggctaatttagcttcttc 30579450  T

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Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 105
Target Start/End: Original strand, 43590946 - 43591022
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||| ||| || | |||||||||||||||||| |||||||||||| ||| ||| || ||||||||||||    
T  43590946 tgggagtgtgctcctcctcaatgtctcaggttcgattctccctagtgccaattaaggtgggctaatttagcttcttc 43591022  T

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Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 104
Target Start/End: Complemental strand, 37162387 - 37162312
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    |||||||||||||||  || |||||||| |||||||||||||| ||||||||||  | || |||||||||||||||    
T  37162387 tgggagtgtgcttcttctcaaggtctcaagttcgattctctctggtgccaatttgaggggattagtttagcttctt 37162312  T

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Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 31 - 105
Target Start/End: Original strand, 37473655 - 37473729
Alignment:
Q  31 ggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||| |||| ||| | ||||||||||||||||||||| ||| || ||||||||| |||||| ||||||||||||    
T  37473655 ggagtttgctcctccttgaggtctcaggttcgattctccctaatgtcaatttaggtgggttaatttagcttcttc 37473729  T

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Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 23552155 - 23552212
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttag 84  Q
    |||||||||||||| ||| || |||||||| ||||||||||||||| |||||||||||    
T  23552155 cctgggagtgtgctcctcctcaaggtctcaagttcgattctctctaatgccaatttag 23552212  T

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Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 29 - 105
Target Start/End: Original strand, 2446347 - 2446423
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||| ||| ||||| ||||| |||||||||||||  ||||| ||||||| ||| || ||||||||||||    
T  2446347 tgggagtgtgctcctcctcgagatctcaagttcgattctctccggtgccgatttaggtgggctaatttagcttcttc 2446423  T

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Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 29785339 - 29785263
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    |||| |||||||| ||| || |||||||| |||||||||| ||| ||||||||||  | ||||||||||||||||||    
T  29785339 ctggaagtgtgctcctcctcaaggtctcatgttcgattctttctggtgccaatttgagggggttagtttagcttctt 29785263  T

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Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 29 - 101
Target Start/End: Original strand, 42711997 - 42712069
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagctt 101  Q
    |||||||||||| ||| || |||||||| ||||||||||| |||||| ||||||||| ||| || ||||||||    
T  42711997 tgggagtgtgctcctcctcaaggtctcatgttcgattctccctagtgtcaatttaggtgggctaatttagctt 42712069  T

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Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 48771976 - 48772052
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    ||||||||||||| ||| | |||||||||||||||||| || | ||| |||||||||| ||| || |||||||||||    
T  48771976 ctgggagtgtgctcctccttgaggtctcaggttcgattatcccaagtaccaatttaggtgggctaatttagcttctt 48772052  T

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Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 15905712 - 15905635
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||||| ||| |  |||||||||||||||||||| ||| || |||||| || |||||| ||||||||||||    
T  15905712 cctgggagtgtgctcctcctt-aggtctcaggttcgattctccctaatgtcaatttgggtgggttaatttagcttcttc 15905635  T

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Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 102
Target Start/End: Complemental strand, 38374633 - 38374563
Alignment:
Q  32 gagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttc 102  Q
    ||||||||| ||| || |||||| ||||||||||||| |  ||||||||||||| ||| ||||||||||||    
T  38374633 gagtgtgctcctcctcaaggtcttaggttcgattctccccggtgccaatttaggtgggctagtttagcttc 38374563  T

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Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 41519299 - 41519226
Alignment:
Q  31 ggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||| ||| || |||||||||||||| |||||||| ||| ||||||||| ||| || ||||||||||||    
T  41519299 ggagtgtgctcctcctcaaggtctcaggttcgcttctctct-gtgtcaatttaggtgggctaatttagcttcttc 41519226  T

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Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 9608667 - 9608590
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||| || ||| || || |||||||||||||||||||||||| ||||||  |  |||| |||||||||||||    
T  9608667 ctgggagtgtcctcctcctcaagatctcaggttcgattctctctagtgtcaatttgaggaggttggtttagcttcttc 9608590  T

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Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 9836239 - 9836162
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||| || ||| || || |||||||||||||||||||||||| ||||||  |  |||| |||||||||||||    
T  9836239 ctgggagtgtcctcctcctcaagatctcaggttcgattctctctagtgtcaatttgaggaggttggtttagcttcttc 9836162  T

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Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 27376803 - 27376722
Alignment:
Q  20 tttgaggcctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagctt 101  Q
    |||||||||||||||| |||| ||| || |||| || ||||| ||||||||| || |||||||| | |||||| ||||||||    
T  27376803 tttgaggcctgggagtatgctcctcctcaaggtttctggttcaattctctctggtaccaatttaagggggttaatttagctt 27376722  T

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Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 3174965 - 3175041
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    ||||||||||||| |   ||||||||||||||||||||||||| | |  ||||||||  |||||| |||||||||||    
T  3174965 ctgggagtgtgctccatctcgaggtctcaggttcgattctctccaatatcaatttagttgggttaatttagcttctt 3175041  T

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Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 5076013 - 5075957
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttagg 85  Q
    |||||||||||| |||| | |||||||| ||||||||| ||| ||||||||||||||    
T  5076013 tgggagtgtgctcctctgcaaggtctcaagttcgattcactccagtgccaatttagg 5075957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 105
Target Start/End: Original strand, 33222429 - 33222485
Alignment:
Q  49 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||||||||||||||||| ||| ||||||  | |||||||||||| ||||||    
T  33222429 aggtctcaggttcgattctctctggtgtcaatttgagagggttagtttagattcttc 33222485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 104
Target Start/End: Original strand, 41975945 - 41976001
Alignment:
Q  48 gaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    ||||||||| |||||||||||||||||| ||||||| | ||| || |||||||||||    
T  41975945 gaggtctcaagttcgattctctctagtgtcaatttaagtgggctaatttagcttctt 41976001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 7309396 - 7309470
Alignment:
Q  30 gggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||||| ||| ||||||||||| |||||||||||||  ||| ||||||| | ||| || ||||||||||||    
T  7309396 gggagtgtgctcctcctcgaggtctcaagttcgattctctc-cgtgtcaatttaagtgggctaatttagcttcttc 7309470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 68
Target Start/End: Complemental strand, 20335868 - 20335829
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctc 68  Q
    |||||||||||| ||| |||||||||||||||||||||||    
T  20335868 tgggagtgtgctcctcctcgaggtctcaggttcgattctc 20335829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 42 - 105
Target Start/End: Original strand, 26199561 - 26199624
Alignment:
Q  42 ctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||| ||| ||||||||||||||||| |||  ||||||||||| | |||| ||||||||||||    
T  26199561 ctctttgagatctcaggttcgattctccctacagccaatttaggtgagttaatttagcttcttc 26199624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 82
Target Start/End: Original strand, 28647007 - 28647057
Alignment:
Q  31 ggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaattt 82  Q
    ||||||||||||||| | |||||||||||||||||| |||| ||||||||||    
T  28647007 ggagtgtgcttctct-caaggtctcaggttcgattccctctggtgccaattt 28647057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 85
Target Start/End: Original strand, 2882991 - 2883045
Alignment:
Q  31 ggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttagg 85  Q
    |||||||||| ||| || ||||||||||||| ||||||||| ||| |||||||||    
T  2882991 ggagtgtgctcctcctcaaggtctcaggttcaattctctctggtggcaatttagg 2883045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 105
Target Start/End: Original strand, 15137594 - 15137668
Alignment:
Q  31 ggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||| ||| || |||||||||||| |||||||||| ||| |||||| || ||| || ||||| ||||||    
T  15137594 ggagtgtgctcctcctcaaggtctcaggttagattctctctggtgtcaatttgggtgggctaatttagtttcttc 15137668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 29385778 - 29385704
Alignment:
Q  31 ggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||| ||| || |||||||||||| |||||||| | |||||||||| || ||| || ||| ||||||||    
T  29385778 ggagtgtgctcctcctcaaggtctcaggtttgattctctttggtgccaatttgggtgggctacttttgcttcttc 29385704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 45229060 - 45228986
Alignment:
Q  31 ggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||||  | ||||| | ||||||||||||||| |||| ||||||| | ||| || ||||||||||||    
T  45229060 ggagtgtgcttcttcttgaggttttaggttcgattctctccagtgtcaatttaagtgggctaatttagcttcttc 45228986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 7499963 - 7499922
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctc 68  Q
    |||| |||| |||| |||||||||||||||||||||||||||    
T  7499963 cctgagagtttgctcctcttcgaggtctcaggttcgattctc 7499922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 9183229 - 9183152
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||||||| ||| || | ||||||||||||||| ||||| ||| |||||| || ||| || ||||| ||||||    
T  9183229 ctgggagtgtgctcctcctcaaagtctcaggttcgattatctctggtgtcaatttgggtgggctaatttagtttcttc 9183152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 19553490 - 19553567
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    |||||||||||||| ||| || |||||| |||||| |||||| |  || |||||||||| ||| || |||||||||||    
T  19553490 cctgggagtgtgctcctcctcaaggtcttaggttcaattctccccggttccaatttaggtgggctactttagcttctt 19553567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 22760900 - 22760941
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctc 68  Q
    |||||||||||||| ||| || ||||||||||||||||||||    
T  22760900 cctgggagtgtgctcctcctcaaggtctcaggttcgattctc 22760941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 25655262 - 25655189
Alignment:
Q  32 gagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||| | ||| || |||| |||||||||||||||||| ||||||||||    ||||| |||||||||||||    
T  25655262 gagtgtgatcctcctcaaggtttcaggttcgattctctctggtgccaatttgaaggggttggtttagcttcttc 25655189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 105
Target Start/End: Original strand, 41487409 - 41487474
Alignment:
Q  40 ttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||| || |||||||||||||||||||  |  ||||||||||||| ||| || ||||||||||||    
T  41487409 ttctcctcaaggtctcaggttcgattcttcccggtgccaatttaggtgggctaatttagcttcttc 41487474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 82
Target Start/End: Complemental strand, 41907659 - 41907626
Alignment:
Q  49 aggtctcaggttcgattctctctagtgccaattt 82  Q
    ||||||||||||||||||||||| ||||||||||    
T  41907659 aggtctcaggttcgattctctctggtgccaattt 41907626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 104
Target Start/End: Complemental strand, 5273624 - 5273552
Alignment:
Q  32 gagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    ||||||||| ||| || |||||| ||||| |||| ||||  |||||||||| || ||| ||||||||||||||    
T  5273624 gagtgtgctcctcctcaaggtcttaggtttgattgtctccggtgccaatttgggtgggctagtttagcttctt 5273552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 7744150 - 7744074
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    |||||| | |||| ||| || |||||||||||| |||||||||| |||| |||||  | |||| |||||||||||||    
T  7744150 ctgggactatgctcctcctcaaggtctcaggtttgattctctctggtgcaaatttgagggggtcagtttagcttctt 7744074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 7801217 - 7801253
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcga 63  Q
    |||||||||||||| |||||| |||||||||||||||    
T  7801217 cctgggagtgtgctcctcttcaaggtctcaggttcga 7801253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 26703163 - 26703239
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    ||||||||||||| ||  ||||||||||||||||  || || ||| |||||||||||| ||| || ||||| |||||    
T  26703163 ctgggagtgtgctccttctcgaggtctcaggttcatttatccctaatgccaatttaggtgggctaatttagattctt 26703239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 27313771 - 27313695
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||| |||| ||| || |||| |||| |||||||||||||  |||||||||||| | | || ||||||||||||    
T  27313771 tgggagtttgctcctcctcaaggtttcagattcgattctctctgatgccaatttaggtgagctaatttagcttcttc 27313695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 33181224 - 33181172
Alignment:
Q  52 tctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    ||||||||||||||| |||||||| |||||| || ||| || |||||||||||    
T  33181224 tctcaggttcgattccctctagtgtcaatttgggtgggctaatttagcttctt 33181172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 104
Target Start/End: Complemental strand, 45709742 - 45709670
Alignment:
Q  32 gagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    ||||||||| ||| |||||||||||||||||||| ||||   | |||||||||| ||| ||  ||||||||||    
T  45709742 gagtgtgctcctcctcgaggtctcaggttcgattatctccgataccaatttaggtgggctaacttagcttctt 45709670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 5e-16; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 29 - 104
Target Start/End: Complemental strand, 6859349 - 6859274
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    |||||||||||| |||||| | |||||||||||||||||||||| || ||| ||||| | ||||||||||||||||    
T  6859349 tgggagtgtgctcctcttcaaagtctcaggttcgattctctctaatgtcaacttaggtgagttagtttagcttctt 6859274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 4060253 - 4060175
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||| ||||||||||||| || || |||||||||||||||||||| ||| ||||||  | |||||||||||||||||||    
T  4060253 cctgagagtgtgcttctcctcaagatctcaggttcgattctctctggtgtcaatttgagggggttagtttagcttcttc 4060175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 19322805 - 19322883
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||||| |||||| ||||||| |||| |||||||||||||||||||||  |  |||||||||| |||||||    
T  19322805 cctgggagtgtgctcctcttcaaggtctctggtttgattctctctagtgccaatttgaggaggttagtttaacttcttc 19322883  T

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Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 105
Target Start/End: Complemental strand, 2750643 - 2750587
Alignment:
Q  49 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||| |||||||||||||||||||||||||  | |||||||||||||||||||    
T  2750643 aggtctcatgttcgattctctctagtgccaatttgagggggttagtttagcttcttc 2750587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 14500315 - 14500391
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    ||||||||||||| ||| || ||||||||| ||||||||||||| ||||||||||  | ||| ||||||||||||||    
T  14500315 ctgggagtgtgctcctcctctaggtctcagattcgattctctctggtgccaatttgagggggatagtttagcttctt 14500391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 23052560 - 23052484
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||||||| || |||||||||||||||||||| ||||||||| ||| || ||| || ||||| ||||||    
T  23052560 tgggagtgtgcttctcctcaaggtctcaggttcgattctccctagtgccagtttgggtgggctaatttagtttcttc 23052484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 21213806 - 21213884
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||| | ||| | ||||||||||||||||||||| |  ||||||||||||| ||| |||||| ||||||||    
T  21213806 cctgggagtgtgttcctccttgaggtctcaggttcgattctccccggtgccaatttaggtgggctagttttgcttcttc 21213884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 33582010 - 33582088
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||| ||||||||| ||| | ||||||||||||||||||||||||| || ||||||||| ||  || ||||||||||||    
T  33582010 cctgagagtgtgctcctccttgaggtctcaggttcgattctctctaatgtcaatttaggtggactaatttagcttcttc 33582088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 101
Target Start/End: Original strand, 39715029 - 39715103
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagctt 101  Q
    |||||||||||||| ||| ||||||||||||||||||||||| | ||  |||||||||| ||| || ||||||||    
T  39715029 cctgggagtgtgctcctcctcgaggtctcaggttcgattctccccagcaccaatttaggtgggctaatttagctt 39715103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 42922451 - 42922529
Alignment:
Q  27 cctgggagtgtgcttctcttcga-ggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    |||||||||||||| ||| || | |||||||||||||||||||||| ||||||||||    ||||||||||||||||||    
T  42922451 cctgggagtgtgctcctcctcaaaggtctcaggttcgattctctctggtgccaatttgatggggttagtttagcttctt 42922529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 34041622 - 34041549
Alignment:
Q  32 gagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||| ||| || |||||||||||| ||||| |||| ||||||||||  | |||||||||||||||||||    
T  34041622 gagtgtgctcctcctcaaggtctcaggtttgattccctctggtgccaatttgagggggttagtttagcttcttc 34041549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 29 - 105
Target Start/End: Original strand, 11062399 - 11062474
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||||||| || |||||||||||| |||||||||| ||| |||||| |  | |||||||||||||||||    
T  11062399 tgggagtgtgcttctcctcaaggtctcaggtttgattctctcttgtgtcaattt-gaggagttagtttagcttcttc 11062474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 31 - 103
Target Start/End: Original strand, 45026784 - 45026856
Alignment:
Q  31 ggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttct 103  Q
    |||||||||| ||| || |||||||| ||| |||||||||| ||||||||||  | |||||||||||||||||    
T  45026784 ggagtgtgctcctcctcaaggtctcatgtttgattctctctggtgccaatttgagggggttagtttagcttct 45026856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 104
Target Start/End: Complemental strand, 21195713 - 21195638
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    |||||||||||| ||| || |||||||||||||||||| |||||||| |||||| |  ||| || |||||||||||    
T  21195713 tgggagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttggatgggctaatttagcttctt 21195638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 105
Target Start/End: Original strand, 1435105 - 1435178
Alignment:
Q  31 ggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||||| || ||||||||| ||||||||||||| ||| |||||| || ||| || ||||||||||||    
T  1435105 ggagtgtgcttctcctcaaggtctcag-ttcgattctctctggtgtcaatttgggtgggctaatttagcttcttc 1435178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 7799072 - 7799018
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaattta 83  Q
    |||||||||||| ||| ||||| |||||| |||||||||||| ||||||||||||    
T  7799072 tgggagtgtgctcctcctcgagatctcagattcgattctctccagtgccaattta 7799018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 30410584 - 30410510
Alignment:
Q  31 ggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||| ||| || ||| |||| |||||||| ||||| ||||||||||  | |||||||||||||||||||    
T  30410584 ggagtgtgctcctcctcaaggactcatgttcgattttctctggtgccaatttgagggggttagtttagcttcttc 30410510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 13803536 - 13803609
Alignment:
Q  31 ggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    |||||||||| ||| || ||||||||||||||||| |||||  |||||||||  | ||||||||||| ||||||    
T  13803536 ggagtgtgctcctcctcaaggtctcaggttcgattatctctgatgccaatttgagggggttagtttaccttctt 13803609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 16918616 - 16918539
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||||||| ||| || |||||| ||||| |||||||||| |||||| ||| |  || ||||||||||||||||    
T  16918616 ctgggagtgtgctcctcctcaaggtcttaggttggattctctctggtgccactttggatggtttagtttagcttcttc 16918539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 25637189 - 25637266
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||||||| ||  ||||||||||||||||| |||||||   |||||||||||| ||| || |||| |||||||    
T  25637189 ctgggagtgtgctccttctcgaggtctcaggttcggttctctccgatgccaatttaggtgggctaatttaacttcttc 25637266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 40416429 - 40416352
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    ||||||||| |||| ||| |  ||||||||||||||||||||||| ||||||||||    |||||||||||| |||||    
T  40416429 cctgggagtatgctcctccttaaggtctcaggttcgattctctctggtgccaatttgaaggggttagtttagattctt 40416352  T

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Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 105
Target Start/End: Complemental strand, 41908684 - 41908599
Alignment:
Q  20 tttgaggcctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||| ||| |||||||||| ||| || |||||||| |||||||| || |  |||||||||| || ||| |||||||||||||||    
T  41908684 tttgagaccttggagtgtgctcctcctcaaggtctcaagttcgattatccccggtgccaatttgggtgggctagtttagcttcttc 41908599  T

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Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 42327434 - 42327357
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    |||||||||||||| ||| || |||||||||||||||||||||   |||||||||| || ||| || |||||| ||||    
T  42327434 cctgggagtgtgctcctcctcaaggtctcaggttcgattctcttcggtgccaatttgggtgggctaatttagcatctt 42327357  T

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Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 37971956 - 37972008
Alignment:
Q  51 gtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttct 103  Q
    ||||||||||||||||||||  ||||||||||||| ||| || ||||||||||    
T  37971956 gtctcaggttcgattctctccggtgccaatttaggtgggctaatttagcttct 37972008  T

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Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 19244146 - 19244201
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaattt 82  Q
    |||| ||||||||| |||  | ||||||||||||||||||||||| ||||||||||    
T  19244146 cctgagagtgtgctcctccccaaggtctcaggttcgattctctctggtgccaattt 19244201  T

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Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 102
Target Start/End: Original strand, 24144716 - 24144786
Alignment:
Q  32 gagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttc 102  Q
    |||||| || ||||||||| |||||||||||||| |  |||| ||||||||||| ||| || |||||||||    
T  24144716 gagtgtactcctcttcgagatctcaggttcgatttttcctagcgccaatttaggtgggctaatttagcttc 24144786  T

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Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 83
Target Start/End: Complemental strand, 33569891 - 33569841
Alignment:
Q  33 agtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaattta 83  Q
    ||||||||  || |||||||||||||||||||||||||| |||| ||||||    
T  33569891 agtgtgctcttcctcgaggtctcaggttcgattctctctggtgctaattta 33569841  T

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Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 37480112 - 37480190
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||| ||||||||| ||| || |||||||||||||||||||| |  || ||||||| || ||| || ||||||||||||    
T  37480112 cctgagagtgtgctcctcctcaaggtctcaggttcgattctccccggtcccaatttgggtgggctaatttagcttcttc 37480190  T

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Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 42602591 - 42602669
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||||||||||||| ||  || |||||| ||||| |||||||||  |||||||||| || ||| || ||||||||||||    
T  42602591 cctgggagtgtgctccttctcaaggtcttaggtttgattctctccggtgccaatttgggtgggctaatttagcttcttc 42602669  T

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Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 4439013 - 4438940
Alignment:
Q  32 gagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||| ||| || ||||| || |||||||||| ||| || |||||||  | |||||||||||||||||||    
T  4439013 gagtgtgctcctcctcaaggtcgcatgttcgattctttctggtaccaatttgagagggttagtttagcttcttc 4438940  T

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Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 12086168 - 12086091
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    ||||| |||||||| ||| || ||||||| |||||||||| |||  |||| |||||||| ||| || |||||||||||    
T  12086168 cctggaagtgtgctcctcctcaaggtctcgggttcgattccctccggtgctaatttaggtgggctaatttagcttctt 12086091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 17737661 - 17737608
Alignment:
Q  29 tgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaattt 82  Q
    |||||||||||| ||| || |||||||| |||||||| || |||||||||||||    
T  17737661 tgggagtgtgctcctcctcaaggtctcatgttcgattatccctagtgccaattt 17737608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 29503308 - 29503349
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctc 68  Q
    |||||||||||||| ||| || ||||||||||||||||||||    
T  29503308 cctgggagtgtgctcctcctcaaggtctcaggttcgattctc 29503349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 33962822 - 33962765
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttagg 85  Q
    ||||||||||||| ||| ||||| |||| | ||||||||||  |||||||||||||||    
T  33962822 ctgggagtgtgctcctcctcgagatctcggattcgattctccttagtgccaatttagg 33962765  T

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Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 35710432 - 35710505
Alignment:
Q  31 ggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    |||||||| | ||||| ||||||||| |||||||||||| ||||  |||||||||  || ||||||| ||||||    
T  35710432 ggagtgtgttcctctttgaggtctcatgttcgattctctgtagtatcaatttaggttggctagtttaacttctt 35710505  T

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Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 101
Target Start/End: Original strand, 39764991 - 39765044
Alignment:
Q  48 gaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagctt 101  Q
    ||||||||||||||||||| |||||||| ||||||||  ||| || ||||||||    
T  39764991 gaggtctcaggttcgattccctctagtgtcaatttagctgggctaatttagctt 39765044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 42860379 - 42860424
Alignment:
Q  21 ttgaggcctgggagtgtgcttctcttcgaggtctcaggttcgattc 66  Q
    ||||| |||||||||||||| ||| ||||||||||| |||||||||    
T  42860379 ttgagacctgggagtgtgctcctcctcgaggtctcaagttcgattc 42860424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 11251130 - 11251182
Alignment:
Q  33 agtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttagg 85  Q
    |||||||| ||| || |||||||||||| |||||||||| ||| |||||||||    
T  11251130 agtgtgctcctcctcaaggtctcaggtttgattctctctggtgtcaatttagg 11251182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 105
Target Start/End: Complemental strand, 21304011 - 21303955
Alignment:
Q  49 aggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    |||| |||||||||||||||||| ||| ||||||  | |||||| ||||||||||||    
T  21304011 aggtttcaggttcgattctctctggtgtcaatttgagggggttaatttagcttcttc 21303955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 103
Target Start/End: Original strand, 30359695 - 30359766
Alignment:
Q  31 ggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttct 103  Q
    |||||||||| ||| || ||||||||  |||||||||| | ||||||||||| || ||| |||||||||||||    
T  30359695 ggagtgtgctcctcctcaaggtctcat-ttcgattctccccagtgccaatttgggtgggctagtttagcttct 30359766  T

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Target: scaffold0002 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 95010 - 94935
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    |||||||||||||| ||| || ||||||||||||| ||| ||||| |||||||||||   ||||||||||||||||||    
T  95010 cctgggagtgtgctcctcctcaaggtctcaggttcaattatctctggtgccaattta--agggttagtttagcttctt 94935  T

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Target: scaffold0074 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 45794 - 45721
Alignment:
Q  31 ggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    |||||||| | ||| | ||||||||| |||||||||||||| ||| ||||||||| ||||||||||| ||||||    
T  45794 ggagtgtgttcctccttgaggtctcatgttcgattctctctggtgtcaatttaggtgggttagtttaacttctt 45721  T

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Target: scaffold0032 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 112320 - 112396
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    ||||||||||| | ||||| ||||||| |||||||||||||||  ||||||||||||| ||  || |||||||||||    
T  112320 ctgggagtgtggtcctctttgaggtctgaggttcgattctctccggtgccaatttaggtggactaatttagcttctt 112396  T

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Target: scaffold0008 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 49348 - 49420
Alignment:
Q  32 gagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttctt 104  Q
    ||||||||| ||||||||||| |||||||||||||||||  ||| ||||||| | |||||| |||| ||||||    
T  49348 gagtgtgctcctcttcgaggtatcaggttcgattctctccggtgtcaatttaagtgggttaatttaacttctt 49420  T

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Target: scaffold0299 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 71
Target Start/End: Original strand, 11566 - 11609
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctct 71  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||    
T  11566 ctgggagtgtgctcctcctcgaggtctcaggttcgattctctct 11609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0196 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0196
Description:

Target: scaffold0196; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 17445 - 17372
Alignment:
Q  32 gagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||| || |||||| ||||| ||||||||||||  |||||||||||||| | | ||||||| |||||||    
T  17445 gagtgtgctccttttcgagatctcatgttcgattctcttaagtgccaatttaggtgagctagtttaccttcttc 17372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 2746 - 2695
Alignment:
Q  31 ggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaattt 82  Q
    ||||| |||| ||| || ||||||||||||||||||||||| ||||||||||    
T  2746 ggagtctgctcctcctcaaggtctcaggttcgattctctctggtgccaattt 2695  T

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Target: scaffold1367 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 878 - 832
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagt 74  Q
    |||||| |||||| ||| |||| ||||||||||||||||||||||||    
T  878 ctgggaatgtgctcctcctcgaagtctcaggttcgattctctctagt 832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 70
Target Start/End: Complemental strand, 13084 - 13042
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctctc 70  Q
    ||||||||||||| ||| || ||||||||||||||||||||||    
T  13084 ctgggagtgtgctcctcctcaaggtctcaggttcgattctctc 13042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 20001 - 19928
Alignment:
Q  27 cctgggagtgtgcttctcttcgaggtctcaggttcgattctctctagtgccaatttaggcgggttagtttagctt 101  Q
    ||||||||| |||| ||| || ||||||||||||||||||||||| |||  ||||| |  |||||||||||||||    
T  20001 cctgggagtatgctcctcctcaaggtctcaggttcgattctctctggtgttaattt-gaggggttagtttagctt 19928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 105
Target Start/End: Complemental strand, 42535 - 42482
Alignment:
Q  51 gtctcaggttcgattctctctagtgccaatttaggcgggttagtttagcttcttc 105  Q
    ||||||||||||||||||| | ||||||||||| | |||||| ||||||||||||    
T  42535 gtctcaggttcgattctctttggtgccaatttaag-gggttaatttagcttcttc 42482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 2508 - 2468
Alignment:
Q  28 ctgggagtgtgcttctcttcgaggtctcaggttcgattctc 68  Q
    ||||||||||||| ||| || ||||||||||||||||||||    
T  2508 ctgggagtgtgctcctcctcaaggtctcaggttcgattctc 2468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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