View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20790_high_14 (Length: 248)
Name: NF20790_high_14
Description: NF20790
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20790_high_14 |
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Alignment Details
Target: chr2 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 13 - 233
Target Start/End: Original strand, 32513388 - 32513608
Alignment:
| Q |
13 |
tgaaatgaaatgataattaggagaatatacaagagacttacaattgtagagaatgattaatgatgtatagtttatggtaagacgtggtacattgtaatac |
112 |
Q |
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| T |
32513388 |
tgaaatgaaatgataattaggaggatatacaagagacttacaattgtagagaatgattaatgatggatagtttatggtaagacgtggtacattgtaatac |
32513487 |
T |
|
| Q |
113 |
aacacataaaaagaaagagctagagagagttccataatagtgttgagtgacaacttaaccatagtgaagtagatgtttgatctcttgtaggtttaggagt |
212 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32513488 |
aacacataaaaagaaagagctagagagagttccataatagtgtggagtgacaacttaaccatagtgaagtagatgtttgatctcttgtaggtttaggagt |
32513587 |
T |
|
| Q |
213 |
ctatgacaaaggtgagggaag |
233 |
Q |
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||||||||||||||||||||| |
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| T |
32513588 |
ctatgacaaaggtgagggaag |
32513608 |
T |
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