View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20791_high_10 (Length: 327)
Name: NF20791_high_10
Description: NF20791
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20791_high_10 |
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Alignment Details
Target: chr8 (Bit Score: 216; Significance: 1e-118; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 32 - 316
Target Start/End: Original strand, 34634849 - 34635132
Alignment:
| Q |
32 |
aactttgtaatataaagggccacgatcgaatgataaaaaacttaaaagacgaatatctttaacgtttattgatgctaatcagaggaaattaatccaaatt |
131 |
Q |
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| T |
34634849 |
aactttgtaatataaagggccacaatcgaatgataaaaaacttaaaagacgaatatctttaacgtttattgatgctaatcagagaaaattaatccaaatt |
34634948 |
T |
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| Q |
132 |
gtgaattcacacttgccaaaaattgaatatataaaacaatgtagcttcaagtgattgaatgttgtgtaatataaactcaacaaaactctatgcaataaat |
231 |
Q |
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||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
34634949 |
gtgaatt--cacttgccaaaacttgaatatataaaacaatgtagcttcaagtgattgaatgttgtgtaatataaactcaacaaaacactatgcaataaat |
34635046 |
T |
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| Q |
232 |
aagggtg-nnnnnnnnngaagaagtactataagggtgtttattacctataattacgatagtcgtaaccatattacacctacttcat |
316 |
Q |
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||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
34635047 |
aagggtgttttttttttgaagaaatactataagggtgtttattacctataattgcgatagtcgtaaccatattacacctacttcat |
34635132 |
T |
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