View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20794_high_14 (Length: 303)
Name: NF20794_high_14
Description: NF20794
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20794_high_14 |
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Alignment Details
Target: chr3 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 14 - 286
Target Start/End: Complemental strand, 53820598 - 53820326
Alignment:
| Q |
14 |
gagatgaatcaaagttagttatatatttaaaagctaagaagaagttgagtaaggaaattgagaaactagtttctggaatccgttgtgtgaatctgaatgt |
113 |
Q |
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| T |
53820598 |
gagatgaatcaaagttagttatatatttaaaagctaagaagaagttgagtaaggaaattgagaaactagtttctggaatccgttgtgtgaatctgaatgt |
53820499 |
T |
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| Q |
114 |
cacacaacaacaacaattgcatgttcctgtttattcatcttcaccaacgttgttgtcagtttcagatagtgttgaacttggacgtgtgattgaagatgtt |
213 |
Q |
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| T |
53820498 |
cacacaacaacaacaattgcatgttcctgtttattcatcttcaccaacgttgttgtcagtttcagatagtgttgaacttggacgtgtgattgaagatgtt |
53820399 |
T |
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| Q |
214 |
atgagtttaacggtttctgtatccgttgcatttttcaacggggtagcaatgtcatttgcttcgaagagatttt |
286 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53820398 |
atgagtttaacggtttctgtatccgttgcatttttcaacggggtagcaatgtcatttgcttcgaagagatttt |
53820326 |
T |
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