View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20794_low_16 (Length: 269)
Name: NF20794_low_16
Description: NF20794
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20794_low_16 |
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Alignment Details
Target: chr8 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 16 - 253
Target Start/End: Complemental strand, 34379562 - 34379325
Alignment:
| Q |
16 |
ataggcaaagaaactgtttcaacagtattctcctccaacaacaaaatccataagttcatggattttgaattcttaacaagctttaaagacaatgagatta |
115 |
Q |
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| T |
34379562 |
ataggcaaagaaactgtttcaacagtattcttctccaacaacaaaatccataagttgatggattttgaattcttaacaagttttaaagacagtgagatta |
34379463 |
T |
|
| Q |
116 |
tatgaacaaatgtgacaaagaaccaccaaagaattagaacaaaaggaaatcttttattctctctaagtgttttcttcattgaatagaatgaaaccatagt |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34379462 |
tatgaacaaatgtgacaaagaaccaccaaagaattagaacaaaaggaaatcttttattctctctaagtgttttcttcattgaatagaatgaaaccatagt |
34379363 |
T |
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| Q |
216 |
agctaaaacccatgttaaaccaaaagaaacatagttaa |
253 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
34379362 |
agctaaaacccatgttaaaccaaaagaaacatagttaa |
34379325 |
T |
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