View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20796_low_1 (Length: 778)

Name: NF20796_low_1
Description: NF20796
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20796_low_1
NF20796_low_1
[»] chr5 (24 HSPs)
chr5 (271-760)||(37430526-37431015)
chr5 (208-255)||(32872785-32872832)
chr5 (207-259)||(36562936-36562988)
chr5 (80-131)||(24486894-24486944)
chr5 (100-138)||(34379482-34379520)
chr5 (79-140)||(5007734-5007794)
chr5 (101-138)||(32912068-32912105)
chr5 (101-141)||(11954461-11954501)
chr5 (217-257)||(16971985-16972025)
chr5 (79-138)||(4434479-4434537)
chr5 (79-138)||(14206397-14206455)
chr5 (103-138)||(22649666-22649701)
chr5 (80-138)||(3640201-3640258)
chr5 (217-255)||(11954577-11954615)
chr5 (79-136)||(14923080-14923135)
chr5 (80-138)||(32732123-32732180)
chr5 (100-138)||(40829443-40829481)
chr5 (100-137)||(6940155-6940192)
chr5 (101-134)||(7076577-7076610)
chr5 (101-138)||(8675437-8675474)
chr5 (101-138)||(14532534-14532571)
chr5 (208-257)||(31748473-31748522)
chr5 (101-138)||(34124651-34124688)
chr5 (81-138)||(43153065-43153121)
[»] chr7 (27 HSPs)
chr7 (207-258)||(29723809-29723860)
chr7 (207-256)||(2008718-2008767)
chr7 (79-135)||(26749014-26749068)
chr7 (207-255)||(12007073-12007121)
chr7 (207-255)||(15325527-15325575)
chr7 (207-258)||(37352246-37352297)
chr7 (80-138)||(11352978-11353035)
chr7 (100-138)||(18111616-18111654)
chr7 (101-143)||(46880932-46880974)
chr7 (207-252)||(28249460-28249505)
chr7 (82-138)||(33465044-33465099)
chr7 (207-255)||(33845178-33845226)
chr7 (80-144)||(41985099-41985162)
chr7 (79-138)||(43942646-43942703)
chr7 (220-256)||(46881051-46881087)
chr7 (79-138)||(3937126-3937184)
chr7 (79-137)||(2323301-2323358)
chr7 (207-257)||(32777592-32777642)
chr7 (79-140)||(2469700-2469760)
chr7 (207-252)||(21103148-21103193)
chr7 (101-138)||(24532947-24532984)
chr7 (79-144)||(37351989-37352053)
chr7 (101-138)||(40353294-40353331)
chr7 (207-256)||(43807699-43807748)
chr7 (81-138)||(45420065-45420121)
chr7 (101-138)||(47145077-47145114)
chr7 (81-138)||(49142522-49142578)
[»] chr4 (30 HSPs)
chr4 (207-255)||(39158241-39158289)
chr4 (207-255)||(51255882-51255930)
chr4 (207-255)||(18316073-18316121)
chr4 (81-134)||(25318073-25318128)
chr4 (207-255)||(38519929-38519977)
chr4 (217-254)||(21014143-21014180)
chr4 (101-138)||(40348823-40348860)
chr4 (82-138)||(48335564-48335621)
chr4 (217-258)||(55266171-55266212)
chr4 (83-143)||(5386385-5386444)
chr4 (207-255)||(29227130-29227178)
chr4 (83-138)||(9095949-9096003)
chr4 (208-255)||(22813609-22813656)
chr4 (72-138)||(39605969-39606033)
chr4 (79-138)||(43769720-43769778)
chr4 (80-138)||(28657445-28657502)
chr4 (80-138)||(37727059-37727117)
chr4 (101-143)||(39158135-39158177)
chr4 (100-138)||(49585023-49585061)
chr4 (106-140)||(56557768-56557802)
chr4 (101-138)||(149489-149526)
chr4 (82-138)||(1580288-1580342)
chr4 (80-136)||(4106052-4106106)
chr4 (80-137)||(4949516-4949572)
chr4 (101-138)||(7627878-7627915)
chr4 (101-138)||(26206981-26207018)
chr4 (207-256)||(26600085-26600134)
chr4 (81-138)||(31657657-31657713)
chr4 (103-140)||(41262347-41262384)
chr4 (82-138)||(50608629-50608683)
[»] chr3 (23 HSPs)
chr3 (207-255)||(29525999-29526047)
chr3 (82-140)||(9753230-9753287)
chr3 (207-257)||(34307426-34307476)
chr3 (207-255)||(4494124-4494172)
chr3 (76-138)||(19148996-19149056)
chr3 (83-138)||(35377086-35377141)
chr3 (79-138)||(50745557-50745615)
chr3 (101-143)||(38671647-38671689)
chr3 (79-138)||(3281720-3281778)
chr3 (217-252)||(27168572-27168607)
chr3 (81-140)||(47683800-47683858)
chr3 (79-138)||(49361840-49361898)
chr3 (79-138)||(49761316-49761374)
chr3 (103-137)||(10464975-10465009)
chr3 (80-138)||(29846896-29846953)
chr3 (101-138)||(3953479-3953516)
chr3 (101-138)||(24095410-24095447)
chr3 (82-134)||(24256780-24256830)
chr3 (81-138)||(28700471-28700527)
chr3 (81-138)||(35368621-35368677)
chr3 (79-108)||(38470597-38470626)
chr3 (207-252)||(39713927-39713972)
chr3 (101-138)||(50314654-50314691)
[»] chr8 (23 HSPs)
chr8 (208-255)||(33451452-33451499)
chr8 (207-255)||(1068742-1068790)
chr8 (81-137)||(7010684-7010739)
chr8 (80-138)||(9963694-9963752)
chr8 (217-256)||(42652739-42652778)
chr8 (79-144)||(40413348-40413412)
chr8 (82-138)||(6243045-6243100)
chr8 (207-255)||(15716863-15716911)
chr8 (207-255)||(33107754-33107802)
chr8 (207-255)||(34435624-34435672)
chr8 (207-255)||(44091022-44091070)
chr8 (79-138)||(14710898-14710956)
chr8 (223-254)||(36874001-36874032)
chr8 (83-138)||(39211054-39211108)
chr8 (84-137)||(17823469-17823520)
chr8 (100-138)||(28756564-28756602)
chr8 (80-138)||(30439510-30439567)
chr8 (80-138)||(37392133-37392190)
chr8 (101-134)||(8645195-8645228)
chr8 (208-257)||(11134720-11134769)
chr8 (106-143)||(34435736-34435773)
chr8 (77-138)||(38939194-38939254)
chr8 (101-138)||(41520998-41521035)
[»] chr2 (23 HSPs)
chr2 (217-255)||(26480977-26481015)
chr2 (422-468)||(41265762-41265808)
chr2 (207-257)||(44239172-44239222)
chr2 (207-256)||(2427885-2427934)
chr2 (207-260)||(11965929-11965982)
chr2 (80-137)||(42607536-42607592)
chr2 (79-138)||(6049349-6049408)
chr2 (79-138)||(10711733-10711791)
chr2 (207-256)||(37731086-37731135)
chr2 (82-138)||(37737982-37738036)
chr2 (207-251)||(14877125-14877169)
chr2 (207-255)||(31578570-31578618)
chr2 (207-255)||(37316702-37316750)
chr2 (83-135)||(13265975-13266029)
chr2 (78-109)||(17569749-17569780)
chr2 (100-143)||(19916684-19916727)
chr2 (104-143)||(37003643-37003682)
chr2 (79-137)||(6646832-6646889)
chr2 (100-138)||(21738620-21738658)
chr2 (100-138)||(40210072-40210110)
chr2 (81-138)||(22296134-22296190)
chr2 (81-138)||(22353180-22353236)
chr2 (106-143)||(37731199-37731236)
[»] chr1 (31 HSPs)
chr1 (217-255)||(4213218-4213256)
chr1 (207-251)||(7918953-7918997)
chr1 (82-138)||(47398456-47398511)
chr1 (207-255)||(47642494-47642542)
chr1 (207-255)||(48983555-48983603)
chr1 (207-258)||(38878785-38878836)
chr1 (79-137)||(50797788-50797845)
chr1 (101-137)||(8846003-8846039)
chr1 (82-138)||(18336158-18336213)
chr1 (207-255)||(27742745-27742793)
chr1 (207-255)||(40439727-40439775)
chr1 (207-255)||(42468728-42468776)
chr1 (82-138)||(51718631-51718687)
chr1 (79-138)||(8200084-8200142)
chr1 (79-138)||(11121489-11121547)
chr1 (79-138)||(38303692-38303751)
chr1 (79-138)||(40596059-40596117)
chr1 (79-138)||(48325783-48325841)
chr1 (79-137)||(611641-611698)
chr1 (101-143)||(4213102-4213144)
chr1 (81-143)||(4857921-4857982)
chr1 (80-138)||(33358163-33358220)
chr1 (82-144)||(37690429-37690490)
chr1 (77-134)||(48103398-48103453)
chr1 (100-138)||(52437523-52437561)
chr1 (101-138)||(5771752-5771789)
chr1 (101-138)||(40328745-40328782)
chr1 (100-137)||(46281465-46281502)
chr1 (81-138)||(48220148-48220204)
chr1 (207-256)||(48858959-48859008)
chr1 (101-134)||(50824771-50824804)
[»] chr6 (9 HSPs)
chr6 (217-257)||(17182244-17182284)
chr6 (417-468)||(34260975-34261026)
chr6 (217-255)||(1287059-1287097)
chr6 (207-255)||(33712456-33712504)
chr6 (103-138)||(5570338-5570373)
chr6 (208-255)||(5739651-5739698)
chr6 (207-257)||(8645444-8645494)
chr6 (106-140)||(34442065-34442099)
chr6 (207-252)||(18064980-18065025)
[»] scaffold0204 (1 HSPs)
scaffold0204 (82-138)||(23086-23143)
[»] scaffold0201 (1 HSPs)
scaffold0201 (207-256)||(8608-8657)
[»] scaffold0618 (1 HSPs)
scaffold0618 (207-255)||(8840-8888)
[»] scaffold0276 (1 HSPs)
scaffold0276 (80-138)||(1656-1711)
[»] scaffold0184 (1 HSPs)
scaffold0184 (207-255)||(13444-13492)
[»] scaffold0078 (1 HSPs)
scaffold0078 (207-255)||(59352-59400)
[»] scaffold0034 (1 HSPs)
scaffold0034 (213-253)||(101790-101830)
[»] scaffold0054 (1 HSPs)
scaffold0054 (80-138)||(31605-31662)


Alignment Details
Target: chr5 (Bit Score: 466; Significance: 0; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 466; E-Value: 0
Query Start/End: Original strand, 271 - 760
Target Start/End: Complemental strand, 37431015 - 37430526
Alignment:
Q  271 acagtatattgtgatattagtaacaatgaaactgaatgactaattatttcatttggtttataatttacaaagtactatttgcatatgcttattcaaatta 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37431015 acagtatattgtgatattagtaacaatgaaactgaatgactaattatttcatttggtttataatttacaaagtactatttgcatatgcttattcaaatta 37430916  T
Q  371 aatacttctaaaatttagcatgcagcataaatttatcagtaacaaatatggaatgtgaatgtaaatgtcttaatttatacacgaaacaagattaatttgg 470  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37430915 aatacttctaaaatttagcatgcagcataaatttatcagtaacaaatatggaatgtgaatgtaaatgtcttaatttatacacgaaacaagattaatttgg 37430816  T
Q  471 aaattgtgatcataggaattgttctattaacgaattaaacactgtataggtaaagcattaagatttgtcaaaccagaacaccagaaaagatttgtcaaac 570  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37430815 aaattgtgatcataggaattattctattaacgaattaaacactgtataggtaaagcattaagatttgtcaaaccagaacaccagaaaagatttgtcaaac 37430716  T
Q  571 caggacaggaaaacactaatagtccaatgcacaagacaagactaccacaatttcaaatacaaagagaataagacatatatgcaatattcttttcccttat 670  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  37430715 caggacaggaaaacactaatagtccaatgcacaagacaagactaccacaatttcaaatacaaagagaataagacatatatgcaatattcttttccctgat 37430616  T
Q  671 tcattcttcttatcaactactatatgtttgcaatcaatgctttgtaggtcatgcttctgcatctttcaaacctcttcataacctctatag 760  Q
    ||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  37430615 tcattctgcttatcaactactatatggttgcaatcaatgcttagtaggtcatgcttctgcatctttcaaacctcttcataacatctatag 37430526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 208 - 255
Target Start/End: Complemental strand, 32872832 - 32872785
Alignment:
Q  208 ttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 255  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  32872832 ttgtccaacaagttgtcacaagaaagggttgttcaaataacattgctc 32872785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 207 - 259
Target Start/End: Complemental strand, 36562988 - 36562936
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctcattg 259  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| |||||||    
T  36562988 gttgtccaacaagttgtcccaacaaagggttgttcaaataacattcctcattg 36562936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 80 - 131
Target Start/End: Original strand, 24486894 - 24486944
Alignment:
Q  80 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatac 131  Q
    |||||||||||||||||||||||||||||||  |||||||||| ||||||||    
T  24486894 aagagaaatgatatttgaacaataatttttg-tacaattttctttctcatac 24486944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 138
Target Start/End: Original strand, 34379482 - 34379520
Alignment:
Q  100 aataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  34379482 aataatttttgtgacaattttctctctcatactcacatt 34379520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 5007794 - 5007734
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacattgt 140  Q
    ||||||||||||||||||||||| || ||||| ||||||||||||| |||||| || |||||    
T  5007794 aaagagaaatgatatttgaacaacaa-ttttgtgacaattttctctttcatacacatattgt 5007734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 138
Target Start/End: Original strand, 32912068 - 32912105
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||| |||||||||||||||||||||||||||    
T  32912068 ataatttttgtgacaattttctctctcatactcacatt 32912105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 141
Target Start/End: Original strand, 11954461 - 11954501
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacattgtt 141  Q
    |||||||||| ||||| ||||||||||||||||||||||||    
T  11954461 ataatttttgtgacaactttctctctcatactcacattgtt 11954501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 16972025 - 16971985
Alignment:
Q  217 aagttgtcacaataaagggttgttcaaataacattgctcat 257  Q
    |||||||||||||||| | ||||||||||||||||||||||    
T  16972025 aagttgtcacaataaatgattgttcaaataacattgctcat 16971985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 138
Target Start/End: Original strand, 4434479 - 4434537
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||||| ||||  ||||||  ||||||||| |||||||||||||||||    
T  4434479 aaagagaaatgatatttgtacaaccatttttt-gacaattttttctctcatactcacatt 4434537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 138
Target Start/End: Original strand, 14206397 - 14206455
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||||| ||||  ||||||  ||||| |||||||||||||||||||||    
T  14206397 aaagagaaatgatatttgtacaaccatttttt-gacaactttctctctcatactcacatt 14206455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 138
Target Start/End: Complemental strand, 22649701 - 22649666
Alignment:
Q  103 aatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||| |||||||||||||||||||||||||||    
T  22649701 aatttttgtgacaattttctctctcatactcacatt 22649666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 3640258 - 3640201
Alignment:
Q  80 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||||||||   ||||| | ||||| |||||||||||||||||||||    
T  3640258 aagagaaatgatatttgaacatctatttt-gagacaactttctctctcatactcacatt 3640201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 217 - 255
Target Start/End: Original strand, 11954577 - 11954615
Alignment:
Q  217 aagttgtcacaataaagggttgttcaaataacattgctc 255  Q
    ||||||||| |||||| ||||||||||||||||||||||    
T  11954577 aagttgtcaaaataaatggttgttcaaataacattgctc 11954615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 79 - 136
Target Start/End: Original strand, 14923080 - 14923135
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcaca 136  Q
    |||||||||||||||||||||||  ||||||   |||| |||||||||||||||||||    
T  14923080 aaagagaaatgatatttgaacaaccattttt--tacaactttctctctcatactcaca 14923135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 32732180 - 32732123
Alignment:
Q  80 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||| ||||||| ||||| |||||||  |||| |||||||||||||||||||||    
T  32732180 aagagaaattatatttgtacaatcatttttgt-acaactttctctctcatactcacatt 32732123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 100 - 138
Target Start/End: Original strand, 40829443 - 40829481
Alignment:
Q  100 aataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||| ||||||||| |||||||||||||||||    
T  40829443 aataatttttgtgacaattttttctctcatactcacatt 40829481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 137
Target Start/End: Complemental strand, 6940192 - 6940155
Alignment:
Q  100 aataatttttgcgacaattttctctctcatactcacat 137  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  6940192 aataatttttgtgacaactttctctctcatactcacat 6940155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 134
Target Start/End: Complemental strand, 7076610 - 7076577
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactca 134  Q
    |||||||||| |||||||||||||||||||||||    
T  7076610 ataatttttgtgacaattttctctctcatactca 7076577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 138
Target Start/End: Complemental strand, 8675474 - 8675437
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||| |||||| ||||||||||||||||||||||||||    
T  8675474 ataacttttgcaacaattttctctctcatactcacatt 8675437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 138
Target Start/End: Original strand, 14532534 - 14532571
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  14532534 ataatttttgtgacaactttctctctcatactcacatt 14532571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 257
Target Start/End: Original strand, 31748473 - 31748522
Alignment:
Q  208 ttgtccaacaagttgtcacaataaagggttgttcaaataacattgctcat 257  Q
    |||||||| |||||||||||| ||| | ||||||||||||||| ||||||    
T  31748473 ttgtccaataagttgtcacaaaaaatgattgttcaaataacatcgctcat 31748522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 138
Target Start/End: Original strand, 34124651 - 34124688
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||| || ||||||||||||||||||||||||    
T  34124651 ataatttttgtgataattttctctctcatactcacatt 34124688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 138
Target Start/End: Complemental strand, 43153121 - 43153065
Alignment:
Q  81 agagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||| |||| ||||||||  |||| ||||||||||||| |||||||    
T  43153121 agagaaatgatatttgtacaacaatttttg-tacaactttctctctcatattcacatt 43153065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 207 - 258
Target Start/End: Complemental strand, 29723860 - 29723809
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctcatt 258  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  29723860 gttgtccaacaagttgtcacaataaatggttgtacaaataacattgctcatt 29723809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 2008767 - 2008718
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctca 256  Q
    |||||||||||||||||||||  ||| |||||||||||||||||||||||    
T  2008767 gttgtccaacaagttgtcacataaaatggttgttcaaataacattgctca 2008718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 26749014 - 26749068
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcac 135  Q
    ||||||||||||||||||||||| |||||||  ||||| ||||||||||||||||||    
T  26749014 aaagagaaatgatatttgaacaacaattttt--gacaactttctctctcatactcac 26749068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 12007121 - 12007073
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 255  Q
    ||||||||||||||||||||||||||  ||||| |||||||||||||||    
T  12007121 gttgtccaacaagttgtcacaataaatagttgtacaaataacattgctc 12007073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 15325575 - 15325527
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 255  Q
    |||||||||||||||||||||  ||| ||||||||||||||||||||||    
T  15325575 gttgtccaacaagttgtcacataaaaaggttgttcaaataacattgctc 15325527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 207 - 258
Target Start/End: Original strand, 37352246 - 37352297
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctcatt 258  Q
    ||||||||||||||||  |||| ||| |||||||||||||||||||||||||    
T  37352246 gttgtccaacaagttggtacaagaaatggttgttcaaataacattgctcatt 37352297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 11353035 - 11352978
Alignment:
Q  80 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||||||||  |||||| | ||||| |||||||||||||||||||||    
T  11353035 aagagaaatgatatttgaacatcaatttt-gtgacaactttctctctcatactcacatt 11352978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 138
Target Start/End: Complemental strand, 18111654 - 18111616
Alignment:
Q  100 aataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  18111654 aataatttttgtgacaattttctctctcatactcacatt 18111616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 143
Target Start/End: Original strand, 46880932 - 46880974
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacattgttct 143  Q
    ||||||||||||| |||||||||||||||||||| ||||||||    
T  46880932 ataatttttgcgataattttctctctcatactcatattgttct 46880974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 28249505 - 28249460
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattg 252  Q
    ||||||||| |||||||||||| ||| |||||||||||||||||||    
T  28249505 gttgtccaaaaagttgtcacaagaaatggttgttcaaataacattg 28249460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 138
Target Start/End: Complemental strand, 33465099 - 33465044
Alignment:
Q  82 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||| ||||  |||||||  ||||||||||||||||||||||||||    
T  33465099 gagaaatgatatttgtacaaccatttttgt-acaattttctctctcatactcacatt 33465044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 207 - 255
Target Start/End: Original strand, 33845178 - 33845226
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 255  Q
    |||||||||||| ||||||||  ||| ||||||||||||||||||||||    
T  33845178 gttgtccaacaaattgtcacatgaaaaggttgttcaaataacattgctc 33845226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 41985162 - 41985099
Alignment:
Q  80 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacattgttctc 144  Q
    ||||||||||||||||| ||||| | ||| | ||||| ||||||||||||||||||||| |||||    
T  41985162 aagagaaatgatatttgtacaatcaattt-gtgacaactttctctctcatactcacattattctc 41985099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 138
Target Start/End: Original strand, 43942646 - 43942703
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||||||||||  ||||||   |||| |||||||||||||||||||||    
T  43942646 aaagagaaatgatatttgaacaactattttt--tacaactttctctctcatactcacatt 43942703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 46881051 - 46881087
Alignment:
Q  220 ttgtcacaataaagggttgttcaaataacattgctca 256  Q
    |||||| ||||||||||||||||||||||||||||||    
T  46881051 ttgtcataataaagggttgttcaaataacattgctca 46881087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 138
Target Start/End: Complemental strand, 3937184 - 3937126
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||||||||||   ||||| | ||||| |||||||||||||||||||||    
T  3937184 aaagagaaatgatatttgaacatctatttt-gtgacaactttctctctcatactcacatt 3937126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 79 - 137
Target Start/End: Original strand, 2323301 - 2323358
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacat 137  Q
    |||||||||||||||||| |||| || ||||  ||||| ||||||||||||||||||||    
T  2323301 aaagagaaatgatatttgtacaacaa-ttttatgacaactttctctctcatactcacat 2323358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 207 - 257
Target Start/End: Complemental strand, 32777642 - 32777592
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctcat 257  Q
    ||||||||||||||| | |||| ||| | ||||||||||||||||||||||    
T  32777642 gttgtccaacaagttattacaagaaaagattgttcaaataacattgctcat 32777592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 2469700 - 2469760
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacattgt 140  Q
    |||||||||||||||||| ||||  | ||| | ||||| |||||||||||||||||||||||    
T  2469700 aaagagaaatgatatttgtacaaccacttt-gtgacaactttctctctcatactcacattgt 2469760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 21103148 - 21103193
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattg 252  Q
    ||||||||||||||| |||||| ||| ||||||||||||| |||||    
T  21103148 gttgtccaacaagttatcacaagaaatggttgttcaaatatcattg 21103193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 138
Target Start/End: Complemental strand, 24532984 - 24532947
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||| ||||||||| |||||||||||||||||    
T  24532984 ataatttttgtgacaattttttctctcatactcacatt 24532947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 144
Target Start/End: Complemental strand, 37352053 - 37351989
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacattgttctc 144  Q
    |||||||||||||||||| ||||  | ||| | ||||| ||||||||||||||||||||| |||||    
T  37352053 aaagagaaatgatatttgtacaaccacttt-gtgacaactttctctctcatactcacattattctc 37351989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 138
Target Start/End: Original strand, 40353294 - 40353331
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  40353294 ataatttttgcaacaactttctctctcatactcacatt 40353331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 43807748 - 43807699
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctca 256  Q
    ||||| |||||| |||||| || |||||||||||||||||||| ||||||    
T  43807748 gttgtacaacaaattgtcataagaaagggttgttcaaataacactgctca 43807699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 138
Target Start/End: Complemental strand, 45420121 - 45420065
Alignment:
Q  81 agagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||||||||  ||||||  ||||| ||||||||||||| |||||||    
T  45420121 agagaaatgatatttgaacaactattttt-tgacaactttctctctcatattcacatt 45420065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 138
Target Start/End: Complemental strand, 47145114 - 47145077
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||| ||||||||||||||||| |||||||||    
T  47145114 ataatttttgtgacaattttctctctcacactcacatt 47145077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 138
Target Start/End: Complemental strand, 49142578 - 49142522
Alignment:
Q  81 agagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||| ||||  |||||||  | ||||||||||||||||||||||||    
T  49142578 agagaaatgatatttgtacaaccatttttgtaa-aattttctctctcatactcacatt 49142522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 207 - 255
Target Start/End: Original strand, 39158241 - 39158289
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 255  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  39158241 gttgtccaataagttgtcacaataaatggttgttcaaataacattgctc 39158289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 207 - 255
Target Start/End: Original strand, 51255882 - 51255930
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 255  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||    
T  51255882 gttgtccaacaagttgtcacaataaatggttgtacaaataacattgctc 51255930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 207 - 255
Target Start/End: Original strand, 18316073 - 18316121
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 255  Q
    ||||||||||||||||||| || ||| ||||||||||||||||||||||    
T  18316073 gttgtccaacaagttgtcataagaaatggttgttcaaataacattgctc 18316121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 134
Target Start/End: Complemental strand, 25318128 - 25318073
Alignment:
Q  81 agagaaatgatatttgaaca--ataatttttgcgacaattttctctctcatactca 134  Q
    |||||||||||||||||| |  |||| |||||||||||||||||||||||||||||    
T  25318128 agagaaatgatatttgaatatgataacttttgcgacaattttctctctcatactca 25318073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 207 - 255
Target Start/End: Original strand, 38519929 - 38519977
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 255  Q
    |||||||||||||||||||||||||| |||| | |||||||||||||||    
T  38519929 gttgtccaacaagttgtcacaataaatggttatacaaataacattgctc 38519977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 217 - 254
Target Start/End: Original strand, 21014143 - 21014180
Alignment:
Q  217 aagttgtcacaataaagggttgttcaaataacattgct 254  Q
    |||||||||||||||| |||||||||||||||||||||    
T  21014143 aagttgtcacaataaaaggttgttcaaataacattgct 21014180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 138
Target Start/End: Original strand, 40348823 - 40348860
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||| |||||||||||||||||||||||||||    
T  40348823 ataatttttgtgacaattttctctctcatactcacatt 40348860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 48335564 - 48335621
Alignment:
Q  82 gagaaatgatatttgaaca-ataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||| ||||| | ||||||||| |||||||||||||||||| |||||||    
T  48335564 gagaaatgatattcgaacatacaatttttgcaacaattttctctctcatattcacatt 48335621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 55266171 - 55266212
Alignment:
Q  217 aagttgtcacaataaagggttgttcaaataacattgctcatt 258  Q
    ||||| |||||||||||| |||||||||||||||||||||||    
T  55266171 aagttatcacaataaaggattgttcaaataacattgctcatt 55266212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 143
Target Start/End: Original strand, 5386385 - 5386444
Alignment:
Q  83 agaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacattgttct 143  Q
    |||||||||||||||||||  ||||||  ||||| ||||||||||||||||||||| ||||    
T  5386385 agaaatgatatttgaacaaccatttttt-gacaactttctctctcatactcacattattct 5386444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 29227178 - 29227130
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 255  Q
    |||||||||||| ||||||||  ||| ||||||||||||||||||||||    
T  29227178 gttgtccaacaaattgtcacataaaaaggttgttcaaataacattgctc 29227130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 138
Target Start/End: Original strand, 9095949 - 9096003
Alignment:
Q  83 agaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||| |||||| ||||| |||||||  ||||||||||||||||||||||||||    
T  9095949 agaaatgttatttgtacaattatttttgt-acaattttctctctcatactcacatt 9096003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 255
Target Start/End: Complemental strand, 22813656 - 22813609
Alignment:
Q  208 ttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 255  Q
    ||||||||||||||||||||| |||  |||||| ||||||||||||||    
T  22813656 ttgtccaacaagttgtcacaagaaaaagttgtttaaataacattgctc 22813609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 138
Target Start/End: Original strand, 39605969 - 39606033
Alignment:
Q  72 aataatgaaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||| | ||||||||||||| |||||||  |||||||  |||| |||||||||||||||||||||    
T  39605969 aataataatagagaaatgatatatgaacaaccatttttg--acaactttctctctcatactcacatt 39606033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 138
Target Start/End: Original strand, 43769720 - 43769778
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||||||||||   ||||| | ||||| |||||||||||||||||||||    
T  43769720 aaagagaaatgatatttgaacatccatttt-gtgacaactttctctctcatactcacatt 43769778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 28657502 - 28657445
Alignment:
Q  80 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||||||||   ||||| | ||||| |||||||||||||||||||||    
T  28657502 aagagaaatgatatttgaacatccatttt-gtgacaactttctctctcatactcacatt 28657445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 37727117 - 37727059
Alignment:
Q  80 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||||| ||||| | ||||  || ||||| ||||||||||||||||||    
T  37727117 aagagaaatgatatttgtacaatcaattttttgataatttgctctctcatactcacatt 37727059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 143
Target Start/End: Original strand, 39158135 - 39158177
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacattgttct 143  Q
    |||||||||| ||||| ||||||||||||||||||||| ||||    
T  39158135 ataatttttgtgacaactttctctctcatactcacattattct 39158177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 100 - 138
Target Start/End: Original strand, 49585023 - 49585061
Alignment:
Q  100 aataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  49585023 aataatttttgggacaactttctctctcatactcacatt 49585061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 140
Target Start/End: Original strand, 56557768 - 56557802
Alignment:
Q  106 ttttgcgacaattttctctctcatactcacattgt 140  Q
    ||||| |||||||||||||||||||||||||||||    
T  56557768 ttttgtgacaattttctctctcatactcacattgt 56557802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 138
Target Start/End: Complemental strand, 149526 - 149489
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  149526 ataatttttgtgacaactttctctctcatactcacatt 149489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 138
Target Start/End: Complemental strand, 1580342 - 1580288
Alignment:
Q  82 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||| |||| | ||| ||  ||||||||||||||||||||||||||    
T  1580342 gagaaatgatatttgtacaacactttgtg--acaattttctctctcatactcacatt 1580288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 4106052 - 4106106
Alignment:
Q  80 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcaca 136  Q
    ||||||||||||||||| |||||  |||||   ||||||||||||||||||||||||    
T  4106052 aagagaaatgatatttgtacaattttttttt--acaattttctctctcatactcaca 4106106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 137
Target Start/End: Original strand, 4949516 - 4949572
Alignment:
Q  80 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacat 137  Q
    ||||||||||||||||||||| | ||||  | ||||| ||||||||||||||||||||    
T  4949516 aagagaaatgatatttgaacattcatttg-gtgacaactttctctctcatactcacat 4949572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 138
Target Start/End: Original strand, 7627878 - 7627915
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||| || ||||||||||||||||||||||||    
T  7627878 ataatttttgtgataattttctctctcatactcacatt 7627915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 138
Target Start/End: Complemental strand, 26207018 - 26206981
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  26207018 ataatttttgcaacaattttctctctcatattcacatt 26206981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 26600134 - 26600085
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctca 256  Q
    |||||||||||| ||||||||  |||  ||||||||||||||||||||||    
T  26600134 gttgtccaacaaattgtcacataaaaatgttgttcaaataacattgctca 26600085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 138
Target Start/End: Original strand, 31657657 - 31657713
Alignment:
Q  81 agagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||||||||   ||||| | ||||| |||||||||||||||||||||    
T  31657657 agagaaatgatatttgaacatccatttt-gtgacaactttctctctcatactcacatt 31657713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 140
Target Start/End: Complemental strand, 41262384 - 41262347
Alignment:
Q  103 aatttttgcgacaattttctctctcatactcacattgt 140  Q
    ||||||||| ||||||||||||||| ||||||||||||    
T  41262384 aatttttgcaacaattttctctctcttactcacattgt 41262347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 138
Target Start/End: Complemental strand, 50608683 - 50608629
Alignment:
Q  82 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||| ||||||||||||| ||||||  ||||| ||||||| |||||||||||||    
T  50608683 gagaaattatatttgaacaattattttt--gacaactttctctttcatactcacatt 50608629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 207 - 255
Target Start/End: Original strand, 29525999 - 29526047
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 255  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||    
T  29525999 gttgtccaacaagttgtcacaataaatggttgtacaaataacattgctc 29526047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 140
Target Start/End: Original strand, 9753230 - 9753287
Alignment:
Q  82 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacattgt 140  Q
    ||||||||||||||||||||| ||||| | ||||||||| |||||||||||||||||||    
T  9753230 gagaaatgatatttgaacaatcatttt-gtgacaattttatctctcatactcacattgt 9753287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 207 - 257
Target Start/End: Complemental strand, 34307476 - 34307426
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctcat 257  Q
    ||||||||| |||||||||||| ||||| ||||||||||||||||||||||    
T  34307476 gttgtccaataagttgtcacaagaaaggattgttcaaataacattgctcat 34307426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 4494172 - 4494124
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 255  Q
    ||||||||||||||||||| || ||| ||||||||||||||||||||||    
T  4494172 gttgtccaacaagttgtcataagaaatggttgttcaaataacattgctc 4494124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 76 - 138
Target Start/End: Original strand, 19148996 - 19149056
Alignment:
Q  76 atgaaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||||||||||||||| ||||||   | || |||||||||||||||||||||    
T  19148996 atgaaagagaaatgatatttgaacaatcattttt--tataactttctctctcatactcacatt 19149056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 35377141 - 35377086
Alignment:
Q  83 agaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||||||| || ||||| ||||| ||||||||||| |||||||||    
T  35377141 agaaatgatatttgaacaacaacttttgtgacaactttctctctcacactcacatt 35377086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 79 - 138
Target Start/End: Original strand, 50745557 - 50745615
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||||| ||||| |||||||  |||| |||||||||||||||||||||    
T  50745557 aaagagaaatgatatttgtacaatcatttttg-tacaactttctctctcatactcacatt 50745615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 143
Target Start/End: Original strand, 38671647 - 38671689
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacattgttct 143  Q
    |||||||||| |||||||||||||||| |||||||||||||||    
T  38671647 ataatttttgtgacaattttctctctcgtactcacattgttct 38671689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 138
Target Start/End: Complemental strand, 3281778 - 3281720
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||||||||| | | ||||| ||||| ||||||||| |||||||||||    
T  3281778 aaagagaaatgatatttgaacattta-ttttgtgacaactttctctcttatactcacatt 3281720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 252
Target Start/End: Complemental strand, 27168607 - 27168572
Alignment:
Q  217 aagttgtcacaataaagggttgttcaaataacattg 252  Q
    ||||||||| ||||||||||||||||||||||||||    
T  27168607 aagttgtcataataaagggttgttcaaataacattg 27168572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 140
Target Start/End: Original strand, 47683800 - 47683858
Alignment:
Q  81 agagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacattgt 140  Q
    |||||||||||||||| ||||  ||||| | ||||| |||||||||||||||||||||||    
T  47683800 agagaaatgatatttgtacaaccatttt-gtgacaactttctctctcatactcacattgt 47683858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 138
Target Start/End: Complemental strand, 49361898 - 49361840
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||||| ||||| |||||||  |||| ||| |||||||||||||||||    
T  49361898 aaagagaaatgatatttgtacaatcatttttg-tacaactttttctctcatactcacatt 49361840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 138
Target Start/End: Original strand, 49761316 - 49761374
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||||||||||   ||||| | ||||| |||||||||||||||||||||    
T  49761316 aaagagaaatgatatttgaacatccatttt-gtgacaactttctctctcatactcacatt 49761374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 137
Target Start/End: Original strand, 10464975 - 10465009
Alignment:
Q  103 aatttttgcgacaattttctctctcatactcacat 137  Q
    |||||||| ||||||||||||||||||||||||||    
T  10464975 aatttttgtgacaattttctctctcatactcacat 10465009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 29846953 - 29846896
Alignment:
Q  80 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||||| ||||  |||||||  |||| |||||||||||||||||||||    
T  29846953 aagagaaatgatatttgtacaaccatttttgt-acaactttctctctcatactcacatt 29846896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 138
Target Start/End: Complemental strand, 3953516 - 3953479
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  3953516 ataatttttgtgacaactttctctctcatactcacatt 3953479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 138
Target Start/End: Complemental strand, 24095447 - 24095410
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  24095447 ataatttttgtgacaactttctctctcatactcacatt 24095410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 134
Target Start/End: Complemental strand, 24256830 - 24256780
Alignment:
Q  82 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactca 134  Q
    ||||||||||||||||||||| ||||||  ||||| ||||||| |||||||||    
T  24256830 gagaaatgatatttgaacaatcattttt--gacaaatttctctatcatactca 24256780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 138
Target Start/End: Original strand, 28700471 - 28700527
Alignment:
Q  81 agagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||||||||  ||||||  ||||| ||| |||||||||||||||||    
T  28700471 agagaaatgatatttgaacaaccattttt-tgacaactttatctctcatactcacatt 28700527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 138
Target Start/End: Original strand, 35368621 - 35368677
Alignment:
Q  81 agagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||| ||||  |||||||  |||| |||||||||||||||||||||    
T  35368621 agagaaatgatatttgtacaactatttttgt-acaactttctctctcatactcacatt 35368677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 108
Target Start/End: Complemental strand, 38470626 - 38470597
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttt 108  Q
    ||||||||||||||||||||||||||||||    
T  38470626 aaagagaaatgatatttgaacaataatttt 38470597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 39713972 - 39713927
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattg 252  Q
    |||||||||||| || |||||| ||| |||||||||||||||||||    
T  39713972 gttgtccaacaaattatcacaaaaaatggttgttcaaataacattg 39713927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 138
Target Start/End: Original strand, 50314654 - 50314691
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||| |||| ||||||||||||||||||||||||||||    
T  50314654 ataactttttcgacaattttctctctcatactcacatt 50314691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 208 - 255
Target Start/End: Complemental strand, 33451499 - 33451452
Alignment:
Q  208 ttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 255  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  33451499 ttgtctaacaagttgtcacaagaaagggttgttcaaataacattgctc 33451452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 207 - 255
Target Start/End: Original strand, 1068742 - 1068790
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 255  Q
    |||||||||||||||||||||  ||| ||||||||||||||||||||||    
T  1068742 gttgtccaacaagttgtcacataaaaaggttgttcaaataacattgctc 1068790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 7010684 - 7010739
Alignment:
Q  81 agagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacat 137  Q
    |||||||||||||||| ||||| ||||||  ||||||||||||||||||||||||||    
T  7010684 agagaaatgatatttgtacaatcatttttt-gacaattttctctctcatactcacat 7010739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 80 - 138
Target Start/End: Original strand, 9963694 - 9963752
Alignment:
Q  80 aagagaaatgatatttgaacaataatttttgcgacaattttctctc-tcatactcacatt 138  Q
    ||||||||||||||||| ||||||||||||  |||||||||||||| |||||||||||||    
T  9963694 aagagaaatgatatttgtacaataattttt-tgacaattttctctcatcatactcacatt 9963752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 42652739 - 42652778
Alignment:
Q  217 aagttgtcacaataaagggttgttcaaataacattgctca 256  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  42652739 aagttgtcacaataaagagttgttcaaataacattgctca 42652778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 144
Target Start/End: Complemental strand, 40413412 - 40413348
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacattgttctc 144  Q
    |||||||||||||||||| ||||| ||||| | ||||| |||||||||||||||||| || |||||    
T  40413412 aaagagaaatgatatttgtacaattatttt-gtgacaactttctctctcatactcacgttattctc 40413348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 6243045 - 6243100
Alignment:
Q  82 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||| ||||| |||||||  |||| |||||||||||||||||||||    
T  6243045 gagaaatgatatttgtacaatcatttttgt-acaactttctctctcatactcacatt 6243100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 15716911 - 15716863
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 255  Q
    |||||||||||||||||||||  |||  |||||||||||||||||||||    
T  15716911 gttgtccaacaagttgtcacataaaaaagttgttcaaataacattgctc 15716863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 33107802 - 33107754
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 255  Q
    |||||||||||| ||||||||  ||| ||||||||||||||||||||||    
T  33107802 gttgtccaacaaattgtcacataaaaaggttgttcaaataacattgctc 33107754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 34435672 - 34435624
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 255  Q
    ||||| |||||||||||||||  ||| ||||||||||||||||||||||    
T  34435672 gttgtgcaacaagttgtcacataaaaaggttgttcaaataacattgctc 34435624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 207 - 255
Target Start/End: Original strand, 44091022 - 44091070
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 255  Q
    ||||||||| |||||||||||  ||| ||||||||||||||||||||||    
T  44091022 gttgtccaaaaagttgtcacatgaaaaggttgttcaaataacattgctc 44091070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 138
Target Start/End: Complemental strand, 14710956 - 14710898
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||| |||||||||||| ||||| ||||| | ||||| |||||||||||||||||||||    
T  14710956 aaagataaatgatatttgtacaatcatttt-gtgacaactttctctctcatactcacatt 14710898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 254
Target Start/End: Complemental strand, 36874032 - 36874001
Alignment:
Q  223 tcacaataaagggttgttcaaataacattgct 254  Q
    ||||||||||||||||||||||||||||||||    
T  36874032 tcacaataaagggttgttcaaataacattgct 36874001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 138
Target Start/End: Original strand, 39211054 - 39211108
Alignment:
Q  83 agaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||||||  ||||||  ||||| |||||||||||||||||||||    
T  39211054 agaaatgatatttgaacaaccatttttt-gacaactttctctctcatactcacatt 39211108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 17823469 - 17823520
Alignment:
Q  84 gaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacat 137  Q
    ||||||||||||||||||  ||||||  ||||||||| ||||||||||||||||    
T  17823469 gaaatgatatttgaacaa--atttttatgacaattttttctctcatactcacat 17823520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 100 - 138
Target Start/End: Original strand, 28756564 - 28756602
Alignment:
Q  100 aataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||| ||||||||| |||||||||||||||||    
T  28756564 aataatttttgtgacaattttatctctcatactcacatt 28756602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 30439567 - 30439510
Alignment:
Q  80 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||||||||   ||||| | ||||| |||||||||||||||||||||    
T  30439567 aagagaaatgatatttgaacatccatttt-gtgacaactttctctctcatactcacatt 30439510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 37392190 - 37392133
Alignment:
Q  80 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||||| ||||  ||||||  ||||| |||||||||||||||||||||    
T  37392190 aagagaaatgatatttgtacaaccatttttt-gacaactttctctctcatactcacatt 37392133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 134
Target Start/End: Original strand, 8645195 - 8645228
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactca 134  Q
    |||||||||| |||||||||||||||||||||||    
T  8645195 ataatttttgggacaattttctctctcatactca 8645228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 257
Target Start/End: Original strand, 11134720 - 11134769
Alignment:
Q  208 ttgtccaacaagttgtcacaataaagggttgttcaaataacattgctcat 257  Q
    |||||||||||||| |||||| |||   ||||||||||||||||||||||    
T  11134720 ttgtccaacaagttatcacaagaaatatttgttcaaataacattgctcat 11134769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 143
Target Start/End: Complemental strand, 34435773 - 34435736
Alignment:
Q  106 ttttgcgacaattttctctctcatactcacattgttct 143  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  34435773 ttttgtgacaattttctctctcatacacacattgttct 34435736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 138
Target Start/End: Complemental strand, 38939254 - 38939194
Alignment:
Q  77 tgaaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||||||  ||||  |||||||  |||| |||||||||||||||||||||    
T  38939254 tgaaagagaaatgatatttctacaactatttttgt-acaactttctctctcatactcacatt 38939194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 138
Target Start/End: Original strand, 41520998 - 41521035
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||| |||||| ||||||||||||||||||||||||||    
T  41520998 ataacttttgcaacaattttctctctcatactcacatt 41521035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.000000000001; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 217 - 255
Target Start/End: Complemental strand, 26481015 - 26480977
Alignment:
Q  217 aagttgtcacaataaagggttgttcaaataacattgctc 255  Q
    |||||||||||||||||||||||||||||||||||||||    
T  26481015 aagttgtcacaataaagggttgttcaaataacattgctc 26480977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 422 - 468
Target Start/End: Original strand, 41265762 - 41265808
Alignment:
Q  422 aatgtgaatgtaaatgtcttaatttatacacgaaacaagattaattt 468  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||    
T  41265762 aatgtgaatgtatatgtcttaatttatacacggaacaagattaattt 41265808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 207 - 257
Target Start/End: Original strand, 44239172 - 44239222
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctcat 257  Q
    ||||||||| || ||||||||||||| ||||||||||||||||||||||||    
T  44239172 gttgtccaaaaaattgtcacaataaatggttgttcaaataacattgctcat 44239222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 2427934 - 2427885
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctca 256  Q
    |||||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  2427934 gttgtccaacaaattgtcacaaaaaatggttgttcaaataacattgctca 2427885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 207 - 260
Target Start/End: Original strand, 11965929 - 11965982
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctcattgg 260  Q
    |||||||||||||||||||||  ||| |||||||||||||||||||||| ||||    
T  11965929 gttgtccaacaagttgtcacataaaaaggttgttcaaataacattgctctttgg 11965982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 137
Target Start/End: Complemental strand, 42607592 - 42607536
Alignment:
Q  80 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacat 137  Q
    ||||||||||||||||| ||||| ||||| | ||||||||||||||||||||||||||    
T  42607592 aagagaaatgatatttgtacaattatttt-gtgacaattttctctctcatactcacat 42607536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 79 - 138
Target Start/End: Complemental strand, 6049408 - 6049349
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||||||| |||  ||||||| || || |||||||||||||||||||||    
T  6049408 aaagagaaatgatatttgatcaaccatttttgtgataactttctctctcatactcacatt 6049349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 79 - 138
Target Start/End: Original strand, 10711733 - 10711791
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||||||||||   ||||| | |||||||||||||||||||||||||||    
T  10711733 aaagagaaatgatatttgaacatctatttt-gtgacaattttctctctcatactcacatt 10711791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 37731135 - 37731086
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctca 256  Q
    ||||| |||||||||||||||  ||| |||||||||||||||||||||||    
T  37731135 gttgtgcaacaagttgtcacataaaaaggttgttcaaataacattgctca 37731086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 138
Target Start/End: Complemental strand, 37738036 - 37737982
Alignment:
Q  82 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||||||||  |||||  |||||| |||||||||||||||||||||    
T  37738036 gagaaatgatatttgaacaaccatttt--cgacaactttctctctcatactcacatt 37737982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 14877125 - 14877169
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    |||||| ||||||||||||||| ||| ||||||||||||||||||    
T  14877125 gttgtctaacaagttgtcacaagaaatggttgttcaaataacatt 14877169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 207 - 255
Target Start/End: Original strand, 31578570 - 31578618
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 255  Q
    |||||||||||||||||||||| ||| | ||||||||||| ||||||||    
T  31578570 gttgtccaacaagttgtcacaagaaatgattgttcaaatatcattgctc 31578618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 37316750 - 37316702
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 255  Q
    ||||||||||||||||||| |  ||| ||||||||||||||||||||||    
T  37316750 gttgtccaacaagttgtcatagaaaaaggttgttcaaataacattgctc 37316702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 135
Target Start/End: Original strand, 13265975 - 13266029
Alignment:
Q  83 agaaatgatatttgaacaata--atttttgcgacaattttctctctcatactcac 135  Q
    |||||||||||||| |||| |  |||||||| |||||||||||||||||||||||    
T  13265975 agaaatgatatttgtacaacacaatttttgcaacaattttctctctcatactcac 13266029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 109
Target Start/End: Complemental strand, 17569780 - 17569749
Alignment:
Q  78 gaaagagaaatgatatttgaacaataattttt 109  Q
    ||||||||||||||||||||||||||||||||    
T  17569780 gaaagagaaatgatatttgaacaataattttt 17569749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 143
Target Start/End: Original strand, 19916684 - 19916727
Alignment:
Q  100 aataatttttgcgacaattttctctctcatactcacattgttct 143  Q
    ||||||||||| ||||| |||||||||||||| |||||||||||    
T  19916684 aataatttttgtgacaactttctctctcatacacacattgttct 19916727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 143
Target Start/End: Original strand, 37003643 - 37003682
Alignment:
Q  104 atttttgcgacaattttctctctcatactcacattgttct 143  Q
    ||||||| ||||| ||||||||||||||||||||||||||    
T  37003643 atttttgtgacaactttctctctcatactcacattgttct 37003682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 79 - 137
Target Start/End: Original strand, 6646832 - 6646889
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacat 137  Q
    ||||||||||||||||||||||   ||||| | ||||| ||||||||||||||||||||    
T  6646832 aaagagaaatgatatttgaacatccatttt-gtgacaactttctctctcatactcacat 6646889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 100 - 138
Target Start/End: Complemental strand, 21738658 - 21738620
Alignment:
Q  100 aataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  21738658 aataatttttgtgataattttctctctcatactcacatt 21738620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 100 - 138
Target Start/End: Complemental strand, 40210110 - 40210072
Alignment:
Q  100 aataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  40210110 aataatttttgtgacaactttctctctcatactcacatt 40210072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 138
Target Start/End: Complemental strand, 22296190 - 22296134
Alignment:
Q  81 agagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||| ||||  |||||||  |||||||||||||| |||||||||||    
T  22296190 agagaaatgatatttgtacaaccatttttgt-acaattttctctctgatactcacatt 22296134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 138
Target Start/End: Complemental strand, 22353236 - 22353180
Alignment:
Q  81 agagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||| ||||| ||||| | ||||| ||||| |||||||||||||||    
T  22353236 agagaaatgatatttgtacaatcatttt-gtgacaactttctttctcatactcacatt 22353180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 143
Target Start/End: Complemental strand, 37731236 - 37731199
Alignment:
Q  106 ttttgcgacaattttctctctcatactcacattgttct 143  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  37731236 ttttgtgacaattttctctctcatacacacattgttct 37731199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.000000000001; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 217 - 255
Target Start/End: Original strand, 4213218 - 4213256
Alignment:
Q  217 aagttgtcacaataaagggttgttcaaataacattgctc 255  Q
    |||||||||||||||||||||||||||||||||||||||    
T  4213218 aagttgtcacaataaagggttgttcaaataacattgctc 4213256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 7918997 - 7918953
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 251  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||    
T  7918997 gttgtctaacaagttgtcacaagaaagggttgttcaaataacatt 7918953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 138
Target Start/End: Complemental strand, 47398511 - 47398456
Alignment:
Q  82 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||||||| | ||||||  |||||||||||||||||||||||||||    
T  47398511 gagaaatgatatttgaacattcatttttt-gacaattttctctctcatactcacatt 47398456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 47642542 - 47642494
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 255  Q
    |||||||||||||||||| ||| ||| ||||||||||||||||||||||    
T  47642542 gttgtccaacaagttgtcccaaaaaatggttgttcaaataacattgctc 47642494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 48983603 - 48983555
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 255  Q
    |||||||||||||||||||||||||| |||||| | |||||||||||||    
T  48983603 gttgtccaacaagttgtcacaataaatggttgtaccaataacattgctc 48983555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 207 - 258
Target Start/End: Complemental strand, 38878836 - 38878785
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctcatt 258  Q
    |||||||||||||||||||||  |||  ||||||||||||||||||||||||    
T  38878836 gttgtccaacaagttgtcacataaaaatgttgttcaaataacattgctcatt 38878785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 137
Target Start/End: Original strand, 50797788 - 50797845
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacat 137  Q
    |||||||||||||||||| ||||| ||||| | ||||| ||||||||||||||||||||    
T  50797788 aaagagaaatgatatttgtacaatcatttt-gtgacaactttctctctcatactcacat 50797845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 137
Target Start/End: Original strand, 8846003 - 8846039
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacat 137  Q
    |||||||||| ||||||||||||||||||||||||||    
T  8846003 ataatttttgtgacaattttctctctcatactcacat 8846039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 18336158 - 18336213
Alignment:
Q  82 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||||||| | ||||| | ||||| |||||||||||||||||||||    
T  18336158 gagaaatgatatttgaacattcatttt-gtgacaactttctctctcatactcacatt 18336213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 207 - 255
Target Start/End: Original strand, 27742745 - 27742793
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 255  Q
    ||||||||||||||||| |||  ||| ||||||||||||||||||||||    
T  27742745 gttgtccaacaagttgttacataaaaaggttgttcaaataacattgctc 27742793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 40439775 - 40439727
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 255  Q
    |||||||||||| ||||||||  ||| ||||||||||||||||||||||    
T  40439775 gttgtccaacaaattgtcacataaaaaggttgttcaaataacattgctc 40439727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 207 - 255
Target Start/End: Original strand, 42468728 - 42468776
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 255  Q
    |||||||||||| ||||||||| ||| ||||||||||||| ||||||||    
T  42468728 gttgtccaacaaattgtcacaagaaatggttgttcaaatatcattgctc 42468776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 138
Target Start/End: Complemental strand, 51718687 - 51718631
Alignment:
Q  82 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||||||||  ||||||   |||| |||||||||||||||||||||    
T  51718687 gagaaatgatatttgaacaaccatttttttcacaactttctctctcatactcacatt 51718631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 138
Target Start/End: Original strand, 8200084 - 8200142
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||||||||||   ||||| | ||||| |||||||||||||||||||||    
T  8200084 aaagagaaatgatatttgaacatccatttt-gtgacaactttctctctcatactcacatt 8200142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 138
Target Start/End: Original strand, 11121489 - 11121547
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||||| |||| || |||||  |||| |||||||||||||||||||||    
T  11121489 aaagagaaatgatatttgtacaacaacttttgt-acaactttctctctcatactcacatt 11121547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 138
Target Start/End: Complemental strand, 38303751 - 38303692
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||||||||||  || |||| | |||| |||||||||||||||| ||||    
T  38303751 aaagagaaatgatatttgaacatcaacttttacaacaactttctctctcatactcgcatt 38303692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 138
Target Start/End: Complemental strand, 40596117 - 40596059
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||||| ||||  ||||| | ||||| |||||||||||||||||||||    
T  40596117 aaagagaaatgatatttgtacaaccatttt-gtgacaactttctctctcatactcacatt 40596059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 138
Target Start/End: Complemental strand, 48325841 - 48325783
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||||| ||||  ||||| | ||||||||||| |||||||||||||||    
T  48325841 aaagagaaatgatatttgtacaaccatttt-gtgacaattttctatctcatactcacatt 48325783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 79 - 137
Target Start/End: Complemental strand, 611698 - 611641
Alignment:
Q  79 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacat 137  Q
    |||||||||||||||||||||||| | ||||| || |||||||||||||| | ||||||    
T  611698 aaagagaaatgatatttgaacaatca-ttttgggataattttctctctcaaattcacat 611641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 143
Target Start/End: Original strand, 4213102 - 4213144
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacattgttct 143  Q
    |||| ||||| ||||| ||||||||||||||||||||||||||    
T  4213102 ataacttttgtgacaactttctctctcatactcacattgttct 4213144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 143
Target Start/End: Original strand, 4857921 - 4857982
Alignment:
Q  81 agagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacattgttct 143  Q
    |||||||||||||||||||||| | ||||  ||||| |||||||||||| | |||||||||||    
T  4857921 agagaaatgatatttgaacaatcactttt-tgacaactttctctctcatgcacacattgttct 4857982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 33358220 - 33358163
Alignment:
Q  80 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||||||||||||||   ||||| | ||||| |||||||||||||||||||||    
T  33358220 aagagaaatgatatttgaacatccatttt-gtgacaactttctctctcatactcacatt 33358163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 82 - 144
Target Start/End: Original strand, 37690429 - 37690490
Alignment:
Q  82 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacattgttctc 144  Q
    ||||||||||||||| ||||| | |||   ||||||||||||||||||||||||||| |||||    
T  37690429 gagaaatgatatttgtacaatcactttat-gacaattttctctctcatactcacattattctc 37690490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 48103453 - 48103398
Alignment:
Q  77 tgaaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactca 134  Q
    ||||||||||||||||||||||||  | | |||| ||||| |||||||||||||||||    
T  48103453 tgaaagagaaatgatatttgaaca--actatttgtgacaactttctctctcatactca 48103398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 100 - 138
Target Start/End: Original strand, 52437523 - 52437561
Alignment:
Q  100 aataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  52437523 aataatttttgtgacaactttctctctcatactcacatt 52437561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 138
Target Start/End: Complemental strand, 5771789 - 5771752
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  5771789 ataatttttgtgacaactttctctctcatactcacatt 5771752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 138
Target Start/End: Complemental strand, 40328782 - 40328745
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||||| || ||||||||||||||||||||||||    
T  40328782 ataatttttgtgataattttctctctcatactcacatt 40328745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 137
Target Start/End: Original strand, 46281465 - 46281502
Alignment:
Q  100 aataatttttgcgacaattttctctctcatactcacat 137  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  46281465 aataatttttgtgacaactttctctctcatactcacat 46281502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 138
Target Start/End: Complemental strand, 48220204 - 48220148
Alignment:
Q  81 agagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||||||||   ||||| | ||||| |||||||||||||||||||||    
T  48220204 agagaaatgatatttgaacatccatttt-gtgacaactttctctctcatactcacatt 48220148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 256
Target Start/End: Original strand, 48858959 - 48859008
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctca 256  Q
    ||||||||| | |||||||||| ||| ||||||||| |||||||||||||    
T  48858959 gttgtccaaaaggttgtcacaagaaatggttgttcatataacattgctca 48859008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 134
Target Start/End: Original strand, 50824771 - 50824804
Alignment:
Q  101 ataatttttgcgacaattttctctctcatactca 134  Q
    |||||||||| |||||||||||||||||||||||    
T  50824771 ataatttttgtgacaattttctctctcatactca 50824804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.00000000002; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 17182244 - 17182284
Alignment:
Q  217 aagttgtcacaataaagggttgttcaaataacattgctcat 257  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  17182244 aagttgtcataataaagggttgttcaaataacattgctcat 17182284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 417 - 468
Target Start/End: Original strand, 34260975 - 34261026
Alignment:
Q  417 tatggaatgtgaatgtaaatgtcttaatttatacacgaaacaagattaattt 468  Q
    |||| |||||||||||| |||||||||||||||||||  |||||||||||||    
T  34260975 tatgaaatgtgaatgtatatgtcttaatttatacacgggacaagattaattt 34261026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 217 - 255
Target Start/End: Original strand, 1287059 - 1287097
Alignment:
Q  217 aagttgtcacaataaagggttgttcaaataacattgctc 255  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  1287059 aagttgtcacaataaaggattgttcaaataacattgctc 1287097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 207 - 255
Target Start/End: Original strand, 33712456 - 33712504
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 255  Q
    ||||||||||||||||| |||  ||| ||||||||||||||||||||||    
T  33712456 gttgtccaacaagttgttacataaaaaggttgttcaaataacattgctc 33712504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 138
Target Start/End: Complemental strand, 5570373 - 5570338
Alignment:
Q  103 aatttttgcgacaattttctctctcatactcacatt 138  Q
    |||||||| |||||||||||||||||||||||||||    
T  5570373 aatttttgtgacaattttctctctcatactcacatt 5570338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 255
Target Start/End: Complemental strand, 5739698 - 5739651
Alignment:
Q  208 ttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 255  Q
    |||||||||||||||||| || ||| || |||||||||||||||||||    
T  5739698 ttgtccaacaagttgtcataagaaatggatgttcaaataacattgctc 5739651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 207 - 257
Target Start/End: Original strand, 8645444 - 8645494
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctcat 257  Q
    ||||||||| | |||||||||| ||| ||||||||||||| ||||||||||    
T  8645444 gttgtccaaaaggttgtcacaagaaatggttgttcaaatatcattgctcat 8645494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 140
Target Start/End: Complemental strand, 34442099 - 34442065
Alignment:
Q  106 ttttgcgacaattttctctctcatactcacattgt 140  Q
    ||||| |||||||||||||||||||||||||||||    
T  34442099 ttttgtgacaattttctctctcatactcacattgt 34442065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 18065025 - 18064980
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattg 252  Q
    |||||||||||||||||||||  |||  ||||||||||||||||||    
T  18065025 gttgtccaacaagttgtcacataaaaaagttgttcaaataacattg 18064980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 23086 - 23143
Alignment:
Q  82 gagaaatgatatttgaaca-ataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||| ||||| | ||||||||| |||||||||||||||||| |||||||    
T  23086 gagaaatgatattcgaacatacaatttttgcaacaattttctctctcatattcacatt 23143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 256
Target Start/End: Original strand, 8608 - 8657
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctca 256  Q
    |||||| ||||||||||||||| |||  ||||||||||||||||||||||    
T  8608 gttgtctaacaagttgtcacaagaaatagttgttcaaataacattgctca 8657  T

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Target: scaffold0618 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 8888 - 8840
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 255  Q
    ||||||||| |||||||||||  ||| ||||||||||||||||||||||    
T  8888 gttgtccaaaaagttgtcacatgaaaaggttgttcaaataacattgctc 8840  T

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Target: scaffold0276 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 138
Target Start/End: Original strand, 1656 - 1711
Alignment:
Q  80 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||||||||||    ||||| |||||||||||||||||||||| ||||    
T  1656 aagagaaatgatatttgaacaac---ttttgtgacaattttctctctcatactctcatt 1711  T

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Target: scaffold0184 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 13492 - 13444
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 255  Q
    ||||||||| |||||||||||| |||| |||||| ||||||||||||||    
T  13492 gttgtccaataagttgtcacaaaaaagagttgtttaaataacattgctc 13444  T

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Target: scaffold0078 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 207 - 255
Target Start/End: Original strand, 59352 - 59400
Alignment:
Q  207 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 255  Q
    ||||||||| |||||||||||| |||| |||||| ||||||||||||||    
T  59352 gttgtccaataagttgtcacaaaaaagagttgtttaaataacattgctc 59400  T

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Target: scaffold0034 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 101830 - 101790
Alignment:
Q  213 caacaagttgtcacaataaagggttgttcaaataacattgc 253  Q
    |||||||||||||||| |||||||||| |||||||||||||    
T  101830 caacaagttgtcacaagaaagggttgtgcaaataacattgc 101790  T

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Target: scaffold0054 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 31662 - 31605
Alignment:
Q  80 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 138  Q
    ||||||||||||||||| ||||  ||||||  ||||| |||||||||||||||||||||    
T  31662 aagagaaatgatatttgtacaaccatttttt-gacaactttctctctcatactcacatt 31605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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