View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2079_low_3 (Length: 440)

Name: NF2079_low_3
Description: NF2079
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2079_low_3
NF2079_low_3
[»] chr1 (69 HSPs)
chr1 (13-425)||(45008148-45008559)
chr1 (12-107)||(47721402-47721496)
chr1 (12-107)||(47728394-47728488)
chr1 (12-98)||(649770-649856)
chr1 (12-98)||(740939-741025)
chr1 (12-98)||(4213074-4213160)
chr1 (12-98)||(9566944-9567030)
chr1 (12-98)||(9987953-9988039)
chr1 (12-98)||(21486301-21486386)
chr1 (12-70)||(49570026-49570084)
chr1 (33-98)||(35136846-35136911)
chr1 (12-105)||(49660174-49660267)
chr1 (12-106)||(30530560-30530651)
chr1 (12-103)||(47214205-47214295)
chr1 (12-98)||(756858-756943)
chr1 (33-103)||(1852955-1853025)
chr1 (14-96)||(18434799-18434880)
chr1 (12-70)||(35369729-35369787)
chr1 (12-70)||(49931583-49931641)
chr1 (33-98)||(902640-902705)
chr1 (33-98)||(32915076-32915141)
chr1 (33-98)||(33024575-33024640)
chr1 (33-98)||(34008182-34008247)
chr1 (33-98)||(36577416-36577481)
chr1 (14-98)||(3558848-3558932)
chr1 (16-72)||(4466722-4466778)
chr1 (33-105)||(7128113-7128185)
chr1 (12-104)||(8411702-8411793)
chr1 (14-98)||(19055440-19055524)
chr1 (14-98)||(37685333-37685416)
chr1 (14-98)||(37700102-37700185)
chr1 (34-98)||(48983673-48983737)
chr1 (12-104)||(49647134-49647225)
chr1 (12-96)||(50775140-50775224)
chr1 (16-98)||(11947797-11947879)
chr1 (16-98)||(12999810-12999891)
chr1 (12-98)||(16263427-16263513)
chr1 (12-98)||(21433384-21433470)
chr1 (12-98)||(27465041-27465126)
chr1 (14-68)||(29359670-29359724)
chr1 (23-77)||(34173600-34173653)
chr1 (23-77)||(43367896-43367950)
chr1 (12-98)||(48325969-48326055)
chr1 (12-98)||(48858825-48858911)
chr1 (12-98)||(50726232-50726317)
chr1 (12-98)||(52362484-52362569)
chr1 (33-98)||(3603113-3603178)
chr1 (33-98)||(10890050-10890115)
chr1 (33-98)||(13489664-13489729)
chr1 (33-98)||(15705066-15705131)
chr1 (12-97)||(30735277-30735361)
chr1 (13-98)||(35529364-35529449)
chr1 (12-76)||(35846305-35846366)
chr1 (33-98)||(44294017-44294082)
chr1 (33-98)||(47642611-47642676)
chr1 (33-98)||(51286371-51286436)
chr1 (18-98)||(1689393-1689473)
chr1 (33-105)||(4514458-4514530)
chr1 (34-98)||(7078506-7078569)
chr1 (14-98)||(8350182-8350265)
chr1 (12-56)||(14983816-14983860)
chr1 (34-98)||(18610775-18610838)
chr1 (34-98)||(19651412-19651475)
chr1 (14-98)||(27742619-27742703)
chr1 (12-56)||(36954701-36954745)
chr1 (34-98)||(37588680-37588744)
chr1 (34-98)||(44789148-44789212)
chr1 (33-73)||(46172411-46172451)
chr1 (12-56)||(51718610-51718654)
[»] chr3 (64 HSPs)
chr3 (12-103)||(10811132-10811223)
chr3 (12-98)||(48405412-48405498)
chr3 (12-105)||(8821625-8821717)
chr3 (12-98)||(45293014-45293098)
chr3 (12-98)||(25188448-25188534)
chr3 (12-97)||(26452706-26452791)
chr3 (12-98)||(288727-288813)
chr3 (12-98)||(6178409-6178494)
chr3 (12-98)||(7867695-7867780)
chr3 (12-98)||(26014814-26014899)
chr3 (12-98)||(34456792-34456878)
chr3 (14-84)||(34627867-34627937)
chr3 (12-98)||(37302548-37302633)
chr3 (12-102)||(45711423-45711512)
chr3 (33-103)||(50206974-50207044)
chr3 (12-98)||(50559195-50559281)
chr3 (14-91)||(3648588-3648665)
chr3 (33-98)||(14207262-14207327)
chr3 (33-98)||(14215010-14215075)
chr3 (33-98)||(24482967-24483032)
chr3 (12-97)||(41505494-41505578)
chr3 (11-72)||(44463384-44463445)
chr3 (12-105)||(44813129-44813221)
chr3 (33-98)||(46019464-46019529)
chr3 (33-98)||(49417577-49417642)
chr3 (12-96)||(39629822-39629906)
chr3 (14-70)||(44413906-44413962)
chr3 (31-98)||(9862535-9862602)
chr3 (12-99)||(33939237-33939323)
chr3 (12-103)||(38926625-38926715)
chr3 (11-98)||(47472331-47472417)
chr3 (12-103)||(48287668-48287759)
chr3 (12-70)||(5244258-5244316)
chr3 (12-98)||(9692727-9692813)
chr3 (12-97)||(13348118-13348204)
chr3 (16-98)||(16969554-16969635)
chr3 (12-97)||(25847085-25847171)
chr3 (12-98)||(26550239-26550325)
chr3 (52-98)||(32146009-32146055)
chr3 (16-98)||(46623909-46623990)
chr3 (12-70)||(48353026-48353084)
chr3 (24-98)||(51873395-51873469)
chr3 (11-53)||(52417812-52417854)
chr3 (12-98)||(54773737-54773823)
chr3 (33-98)||(3347126-3347191)
chr3 (33-98)||(10206977-10207042)
chr3 (12-105)||(19150303-19150395)
chr3 (33-98)||(39697226-39697291)
chr3 (41-98)||(44855253-44855309)
chr3 (12-97)||(49167753-49167838)
chr3 (33-98)||(49363255-49363320)
chr3 (25-98)||(49780735-49780808)
chr3 (12-53)||(53871016-53871057)
chr3 (33-98)||(55400001-55400066)
chr3 (36-68)||(6823022-6823054)
chr3 (34-98)||(11327110-11327173)
chr3 (34-98)||(29573361-29573425)
chr3 (33-97)||(32187144-32187208)
chr3 (14-98)||(32362935-32363019)
chr3 (26-98)||(33374494-33374566)
chr3 (34-98)||(37927210-37927274)
chr3 (12-72)||(41443174-41443234)
chr3 (13-97)||(42672819-42672903)
chr3 (24-68)||(49021743-49021787)
[»] chr5 (42 HSPs)
chr5 (12-97)||(13309885-13309970)
chr5 (12-97)||(7287173-7287258)
chr5 (14-98)||(19844294-19844378)
chr5 (34-98)||(41173254-41173318)
chr5 (15-98)||(24468272-24468355)
chr5 (12-98)||(22098257-22098343)
chr5 (12-97)||(43196609-43196693)
chr5 (14-98)||(26686883-26686967)
chr5 (14-98)||(26956614-26956698)
chr5 (31-103)||(42446293-42446365)
chr5 (31-98)||(32872900-32872967)
chr5 (12-98)||(14321938-14322024)
chr5 (12-98)||(30640792-30640877)
chr5 (12-98)||(35098989-35099074)
chr5 (12-98)||(38293342-38293428)
chr5 (6-98)||(611866-611958)
chr5 (34-98)||(8920080-8920144)
chr5 (12-71)||(16437548-16437607)
chr5 (34-105)||(18695313-18695384)
chr5 (23-98)||(27546065-27546140)
chr5 (23-98)||(29803227-29803301)
chr5 (12-98)||(15267786-15267871)
chr5 (31-105)||(17097804-17097878)
chr5 (12-98)||(17402905-17402991)
chr5 (12-98)||(18660761-18660846)
chr5 (16-98)||(21155989-21156071)
chr5 (12-98)||(21922128-21922214)
chr5 (12-98)||(37700462-37700547)
chr5 (12-98)||(41175690-41175775)
chr5 (33-98)||(125094-125158)
chr5 (12-109)||(4088434-4088531)
chr5 (33-98)||(6446522-6446587)
chr5 (33-98)||(6517714-6517779)
chr5 (33-98)||(13089786-13089851)
chr5 (12-97)||(19521987-19522071)
chr5 (12-105)||(33037515-33037607)
chr5 (12-65)||(33598997-33599050)
chr5 (12-65)||(37172738-37172791)
chr5 (33-98)||(43441740-43441805)
chr5 (18-98)||(1079942-1080021)
chr5 (34-98)||(7077348-7077411)
chr5 (26-70)||(35172330-35172374)
[»] chr7 (45 HSPs)
chr7 (12-104)||(41018659-41018751)
chr7 (16-109)||(22195117-22195210)
chr7 (12-98)||(47448828-47448914)
chr7 (33-98)||(43573547-43573612)
chr7 (12-91)||(31445326-31445405)
chr7 (12-98)||(13729728-13729813)
chr7 (16-97)||(40760758-40760836)
chr7 (24-98)||(41750117-41750191)
chr7 (12-97)||(33057382-33057467)
chr7 (12-103)||(13152590-13152680)
chr7 (12-98)||(30941388-30941473)
chr7 (12-98)||(44895556-44895641)
chr7 (12-105)||(2008841-2008934)
chr7 (12-97)||(11564896-11564980)
chr7 (33-98)||(29002610-29002675)
chr7 (12-109)||(42584793-42584890)
chr7 (33-98)||(44184563-44184628)
chr7 (34-98)||(12007191-12007255)
chr7 (16-92)||(17002344-17002420)
chr7 (14-98)||(33578300-33578384)
chr7 (16-100)||(35072350-35072433)
chr7 (12-68)||(48145556-48145612)
chr7 (23-77)||(20337333-20337387)
chr7 (32-98)||(37352112-37352178)
chr7 (12-70)||(40854638-40854696)
chr7 (12-98)||(43159558-43159644)
chr7 (12-98)||(49069251-49069337)
chr7 (41-98)||(13162921-13162978)
chr7 (12-97)||(24532926-24533011)
chr7 (16-97)||(32529842-32529922)
chr7 (13-98)||(32777691-32777776)
chr7 (34-103)||(37899320-37899389)
chr7 (33-98)||(39331987-39332052)
chr7 (33-98)||(40207805-40207869)
chr7 (12-65)||(41189527-41189580)
chr7 (16-105)||(46260079-46260168)
chr7 (34-98)||(116633-116696)
chr7 (41-97)||(2300082-2300138)
chr7 (14-98)||(4971292-4971375)
chr7 (12-68)||(26018072-26018128)
chr7 (12-72)||(27568045-27568105)
chr7 (34-98)||(33050185-33050248)
chr7 (33-97)||(41458599-41458663)
chr7 (12-72)||(46578119-46578179)
chr7 (62-98)||(46725619-46725655)
[»] chr2 (41 HSPs)
chr2 (14-98)||(38821368-38821452)
chr2 (14-98)||(28277752-28277836)
chr2 (6-98)||(2841836-2841927)
chr2 (14-98)||(21611644-21611728)
chr2 (12-103)||(44977483-44977575)
chr2 (12-98)||(3838864-3838949)
chr2 (12-98)||(8427554-8427640)
chr2 (12-98)||(18254193-18254278)
chr2 (12-98)||(18510677-18510763)
chr2 (12-98)||(26206849-26206934)
chr2 (12-98)||(28245730-28245815)
chr2 (12-70)||(33616495-33616553)
chr2 (12-70)||(36774568-36774626)
chr2 (16-98)||(39147767-39147849)
chr2 (33-98)||(2220995-2221060)
chr2 (12-76)||(10094718-10094780)
chr2 (33-98)||(18176942-18177007)
chr2 (13-97)||(9194432-9194516)
chr2 (6-70)||(14328411-14328475)
chr2 (18-70)||(18737863-18737915)
chr2 (6-98)||(25881546-25881637)
chr2 (12-68)||(42532722-42532778)
chr2 (35-98)||(14876959-14877022)
chr2 (23-98)||(42530228-42530303)
chr2 (24-98)||(1040405-1040479)
chr2 (12-70)||(9207619-9207677)
chr2 (12-98)||(9990693-9990778)
chr2 (23-97)||(27939160-27939234)
chr2 (26-100)||(35705494-35705568)
chr2 (12-98)||(36802898-36802983)
chr2 (12-98)||(41042256-41042341)
chr2 (33-98)||(6999072-6999137)
chr2 (12-98)||(7664050-7664138)
chr2 (33-98)||(13347819-13347884)
chr2 (33-98)||(18723596-18723661)
chr2 (12-97)||(26481073-26481158)
chr2 (33-98)||(35589391-35589456)
chr2 (14-98)||(6336254-6336338)
chr2 (16-56)||(8482220-8482260)
chr2 (33-65)||(14891094-14891126)
chr2 (34-98)||(39449122-39449186)
[»] chr4 (52 HSPs)
chr4 (14-97)||(37060320-37060403)
chr4 (6-98)||(50721722-50721814)
chr4 (14-98)||(56557735-56557819)
chr4 (12-98)||(20118783-20118869)
chr4 (12-98)||(336791-336876)
chr4 (12-98)||(2738251-2738337)
chr4 (12-98)||(10250499-10250584)
chr4 (12-98)||(43174986-43175071)
chr4 (12-98)||(50890057-50890142)
chr4 (14-98)||(27051072-27051155)
chr4 (26-98)||(32696183-32696255)
chr4 (14-98)||(55266027-55266111)
chr4 (33-104)||(624316-624387)
chr4 (12-98)||(11546884-11546971)
chr4 (12-98)||(1795965-1796051)
chr4 (12-98)||(7632445-7632531)
chr4 (12-98)||(8455863-8455948)
chr4 (33-98)||(5932161-5932226)
chr4 (33-98)||(22819651-22819716)
chr4 (12-77)||(31574923-31574988)
chr4 (33-97)||(12694433-12694496)
chr4 (33-77)||(13086045-13086089)
chr4 (12-92)||(25123255-25123334)
chr4 (34-98)||(42815406-42815470)
chr4 (34-98)||(51255748-51255812)
chr4 (14-73)||(6520817-6520876)
chr4 (12-99)||(24575835-24575921)
chr4 (23-70)||(32223961-32224008)
chr4 (31-98)||(41262347-41262414)
chr4 (12-98)||(2401612-2401698)
chr4 (12-98)||(5249870-5249956)
chr4 (12-94)||(17367342-17367424)
chr4 (12-98)||(21617185-21617270)
chr4 (12-98)||(30079848-30079933)
chr4 (12-98)||(30170004-30170089)
chr4 (12-98)||(37297051-37297136)
chr4 (12-98)||(52204852-52204938)
chr4 (12-98)||(54000700-54000786)
chr4 (62-107)||(4914899-4914944)
chr4 (33-98)||(5932768-5932833)
chr4 (12-104)||(9362663-9362753)
chr4 (12-105)||(32696773-32696865)
chr4 (33-98)||(39344984-39345049)
chr4 (24-97)||(42916653-42916726)
chr4 (25-98)||(51682956-51683029)
chr4 (51-96)||(51691574-51691619)
chr4 (62-106)||(1298801-1298845)
chr4 (34-98)||(3475871-3475934)
chr4 (24-56)||(18518447-18518479)
chr4 (62-98)||(33278677-33278713)
chr4 (34-98)||(38864741-38864805)
chr4 (34-98)||(53662434-53662497)
[»] chr8 (42 HSPs)
chr8 (13-98)||(2730945-2731030)
chr8 (14-105)||(5849551-5849642)
chr8 (12-98)||(8671539-8671625)
chr8 (12-98)||(12655924-12656010)
chr8 (12-98)||(25830229-25830315)
chr8 (33-98)||(26026898-26026963)
chr8 (14-98)||(6440083-6440167)
chr8 (23-98)||(14707338-14707413)
chr8 (12-98)||(34718117-34718202)
chr8 (12-70)||(35067190-35067248)
chr8 (34-103)||(3946237-3946306)
chr8 (17-98)||(7598710-7598791)
chr8 (26-98)||(40081921-40081996)
chr8 (14-98)||(33100454-33100538)
chr8 (14-98)||(33605063-33605147)
chr8 (14-98)||(43285948-43286032)
chr8 (6-98)||(44061719-44061811)
chr8 (35-98)||(40528750-40528813)
chr8 (12-98)||(1068608-1068694)
chr8 (12-98)||(1633874-1633959)
chr8 (12-98)||(2621787-2621873)
chr8 (44-98)||(5771891-5771945)
chr8 (12-98)||(6991792-6991877)
chr8 (12-98)||(27325760-27325845)
chr8 (16-98)||(43397783-43397864)
chr8 (12-97)||(9549183-9549267)
chr8 (33-98)||(16327156-16327221)
chr8 (33-98)||(16872160-16872225)
chr8 (33-98)||(16966787-16966852)
chr8 (29-98)||(18886898-18886967)
chr8 (41-98)||(28772136-28772193)
chr8 (33-98)||(30136019-30136084)
chr8 (33-98)||(34018810-34018875)
chr8 (33-98)||(34490161-34490226)
chr8 (13-98)||(35153017-35153102)
chr8 (12-97)||(37942890-37942975)
chr8 (13-98)||(38708280-38708365)
chr8 (14-98)||(4054272-4054355)
chr8 (34-98)||(10644807-10644871)
chr8 (14-98)||(12284255-12284339)
chr8 (14-98)||(27854752-27854835)
chr8 (34-98)||(29991414-29991478)
[»] chr6 (34 HSPs)
chr6 (12-98)||(24900777-24900861)
chr6 (12-98)||(17551362-17551448)
chr6 (33-98)||(35213565-35213630)
chr6 (33-98)||(15318192-15318257)
chr6 (34-98)||(27334860-27334923)
chr6 (34-98)||(27395600-27395663)
chr6 (15-98)||(16368033-16368116)
chr6 (12-98)||(8505757-8505843)
chr6 (12-98)||(8645311-8645396)
chr6 (32-98)||(11635538-11635604)
chr6 (12-98)||(25127816-25127902)
chr6 (12-98)||(25811822-25811907)
chr6 (12-98)||(32459500-32459586)
chr6 (28-98)||(34442062-34442132)
chr6 (12-97)||(3853291-3853375)
chr6 (15-68)||(16337909-16337962)
chr6 (33-98)||(17181940-17182005)
chr6 (33-98)||(30423599-30423664)
chr6 (34-98)||(30036799-30036863)
chr6 (6-98)||(33712322-33712414)
chr6 (23-98)||(12044334-12044408)
chr6 (23-98)||(35077125-35077200)
chr6 (12-98)||(5327575-5327661)
chr6 (12-98)||(10335552-10335638)
chr6 (33-103)||(20822872-20822942)
chr6 (12-98)||(22079547-22079632)
chr6 (12-98)||(26595351-26595436)
chr6 (12-98)||(34047389-34047474)
chr6 (12-105)||(552788-552880)
chr6 (33-98)||(18141305-18141370)
chr6 (12-65)||(33551647-33551700)
chr6 (34-98)||(3339505-3339568)
chr6 (14-98)||(14817934-14818017)
chr6 (34-98)||(33421762-33421826)
[»] scaffold0160 (1 HSPs)
scaffold0160 (14-98)||(26423-26507)
[»] scaffold0003 (1 HSPs)
scaffold0003 (14-98)||(337120-337203)
[»] scaffold0034 (1 HSPs)
scaffold0034 (31-98)||(101908-101975)
[»] scaffold0532 (1 HSPs)
scaffold0532 (12-98)||(10966-11051)
[»] scaffold0321 (1 HSPs)
scaffold0321 (33-98)||(19638-19703)
[»] scaffold0085 (1 HSPs)
scaffold0085 (24-97)||(22849-22922)
[»] scaffold0178 (1 HSPs)
scaffold0178 (34-98)||(3854-3918)
[»] scaffold0121 (1 HSPs)
scaffold0121 (25-97)||(3919-3991)
[»] scaffold0027 (1 HSPs)
scaffold0027 (13-93)||(121642-121722)


Alignment Details
Target: chr1 (Bit Score: 369; Significance: 0; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 13 - 425
Target Start/End: Original strand, 45008148 - 45008559
Alignment:
Q  13 gagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttcactaaaattaacac 112  Q
    |||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| | ||||| |||||||||||| |||||||||| ||    
T  45008148 gagagagacggtaaaaatacaatgtgagtatgagagagaaagttattacaaaagttgtcacaaaataattgttgaaatatcatttctctaaaattaagac 45008247  T
Q  113 tcgtaaaagagaccttattaatgtgaaattacaatttaaactgagttaaacatgaagggagtttggattgattccacttgcaaactggtttaatttttta 212  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45008248 tcgtaaaagagaccttatta-tatgaaattacaatttaaactgagttaaacatgaagggagtttggattgattccacttgcaaactggtttaatttttta 45008346  T
Q  213 ttttaacttcaaaataacttgaatattgattaaaggagtggtattagaatattaagaaaaagaagaccattagatgtagagtctattatccgtcaagggg 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45008347 ttttaacttcaaaataacttgaatattgattaaaggagtggtattagaatattaagaaaaagaagaccattagatgtagagtctattatccgtcaagggg 45008446  T
Q  313 cttggaccacttggtctttcattctaagggacttcatgactgcacgttctcttacatgataagattaagttgttaaaatgttcacttattacttatcttc 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45008447 cttggaccacttggtctttcattctaagggacttcatgactgcacgttctcttacatgataagattaagttgttaaaatgttcacttattacttatcttc 45008546  T
Q  413 tcactaaaataat 425  Q
    |||||||||||||    
T  45008547 tcactaaaataat 45008559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 12 - 107
Target Start/End: Complemental strand, 47721496 - 47721402
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttcactaaaatt 107  Q
    ||||||| || ||||||| | ||||||||||||||| |||||||| | ||||||||||||| |||| |  ||||||||||||||||| ||||||||    
T  47721496 agagagataaagtaaaaa-ataatgtgaatatgagacagaaagttgtcacaaaagttgtcaaaaaataaatgtttaaatatcatttctctaaaatt 47721402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 12 - 107
Target Start/End: Complemental strand, 47728488 - 47728394
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttcactaaaatt 107  Q
    ||||||| || ||||||| | ||||||||||||||| |||||||| | ||||||||||||| |||| |  ||||||||||||||||| ||||||||    
T  47728488 agagagataaagtaaaaa-ataatgtgaatatgagacagaaagttgtcacaaaagttgtcaaaaaataaatgtttaaatatcatttctctaaaatt 47728394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 649856 - 649770
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| ||||||| | ||||||| ||||||| |||||||| | ||||||||||| | ||||  |||||| ||||||||||||    
T  649856 agagagagaaagtaaaaagataatgtgagtatgagagagaaagttgtcacaaaagttgtaaaaaaatggttgttcaaatatcatttc 649770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 740939 - 741025
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| ||||||||| ||||||| ||||||| |||||  | | ||||||||||| | |||| |||||| |||||||||||||    
T  740939 agagagagaaagtaaaaatataatgtgagtatgagagagaaaaatgtcacaaaagttgttagaaaatagttgtataaatatcatttc 741025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 4213160 - 4213074
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||||||| ||  ||||||||| ||||||| |||||||| | ||||||||| ||| ||||  |||||| ||||||||||||    
T  4213160 agagagagaaggtagaagaacaatgtgagtatgagagagaaagttgtcacaaaagttatcaaaaaatggttgttcaaatatcatttc 4213074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 9566944 - 9567030
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||| ||||| ||||||| | ||||||| ||||||| |||||||| | ||||||||||||| ||||  |||||| ||||||||||||    
T  9566944 agagtgagaaagtaaaaacataatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttc 9567030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 9988039 - 9987953
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| ||||||||| ||||||| ||||| | |||||||| | ||||||||||||| |||   |||||| ||||||||||||    
T  9988039 agagagagaaagtaaaaatataatgtgagtatgaaagagaaagttgtcacaaaagttgtcaaaaattggttgttcaaatatcatttc 9987953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 21486301 - 21486386
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| || ||||||| | ||||||| ||||||| ||||||||||||||| ||||||||| ||| || |||| ||||||||||||    
T  21486301 agagagataaagtaaaaa-ataatgtgagtatgagagagaaagttattacaatagttgtcaccaaatagatgttcaaatatcatttc 21486386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 49570084 - 49570026
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgt 70  Q
    |||||||||| ||||||||| ||||||||||||||| |||||||| | |||||||||||    
T  49570084 agagagagaaagtaaaaatataatgtgaatatgagagagaaagttgtcacaaaagttgt 49570026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 35136911 - 35136846
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| |||||||||||||||| || |||||||||||||||||  | |||| ||||||||||||    
T  35136911 aatgtgagtatgagaaagaaagttgttgcaaaagttgtcacaaaatggatgttcaaatatcatttc 35136846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 105
Target Start/End: Complemental strand, 49660267 - 49660174
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttcactaaaa 105  Q
    |||||||||| ||||||| | ||||||| ||||||| | |||||| | ||| | ||||||||||||  |||||| |||||||||||| ||||||    
T  49660267 agagagagaaagtaaaaaaataatgtgagtatgagagataaagttgtcacataggttgtcacaaaatggttgttaaaatatcatttctctaaaa 49660174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 106
Target Start/End: Original strand, 30530560 - 30530651
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttcactaaaat 106  Q
    ||||||||||  |||||||| ||||||| ||||||| |||||||| |   ||||||||||||||||  ||||| ||||||||||||| |||||||    
T  30530560 agagagagaa--taaaaatataatgtgagtatgagagagaaagttgtct-aaaagttgtcacaaaatggttgtataaatatcatttctctaaaat 30530651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 103
Target Start/End: Complemental strand, 47214295 - 47214205
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttcactaa 103  Q
    ||||||| || ||||||| | ||||||| ||||||| |||||||| | ||||||||||||| |||| || |||| |||||||||||| ||||    
T  47214295 agagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatagatgttcaaatatcatttctctaa 47214205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 756943 - 756858
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| || ||||||| | ||||||| |||||||||||||||| || ||||||||||||| |||  | |||| ||||||||||||    
T  756943 agagagataaagtaaaaa-ataatgtgagtatgagaaagaaagttgttgcaaaagttgtcactaaatggatgttcaaatatcatttc 756858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 33 - 103
Target Start/End: Original strand, 1852955 - 1853025
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttcactaa 103  Q
    ||||||| ||||||| |||||||| || ||||||||||||| ||| || |||| |||||||||||| ||||    
T  1852955 aatgtgagtatgagagagaaagttgttgcaaaagttgtcactaaatagatgttcaaatatcatttctctaa 1853025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 18434880 - 18434799
Alignment:
Q  14 agagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatt 96  Q
    |||||||| ||||||| | ||||||||| ||||| |||||||| | ||||||||||||| ||||  |||||||| ||||||||    
T  18434880 agagagaaagtaaaaacataatgtgaatgtgagagagaaagttgtcacaaaagttgtca-aaaatggttgtttatatatcatt 18434799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 35369787 - 35369729
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgt 70  Q
    |||||||||| ||||||| ||||||||| ||||||| |||||||| | |||||||||||    
T  35369787 agagagagaaagtaaaaagacaatgtgagtatgagatagaaagttgtcacaaaagttgt 35369729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 49931641 - 49931583
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgt 70  Q
    ||||||| || ||||||||| ||||||||||||||| |||||||| | |||||||||||    
T  49931641 agagagataaagtaaaaatataatgtgaatatgagagagaaagttgtcacaaaagttgt 49931583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 902705 - 902640
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||| |||||||| ||| |||||||||||| ||| || |||| ||||||||||||    
T  902705 aatgtgagtatgagagagaaagttgttataaaagttgtcactaaatagatgttcaaatatcatttc 902640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 32915076 - 32915141
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||| |||||||| | ||||||||||||| |||| || |||| ||||||||||||    
T  32915076 aatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatagatgttcaaatatcatttc 32915141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 33024575 - 33024640
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||| |||||||| || ||||||||||||| ||| || |||| ||||||||||||    
T  33024575 aatgtgagtatgagagagaaagttgttgcaaaagttgtcactaaatagatgttcaaatatcatttc 33024640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 34008247 - 34008182
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||| |||||||| | ||||||||||||| |||| || |||| ||||||||||||    
T  34008247 aatgtgagtatgagatagaaagttgtcacaaaagttgtcataaaatagatgttcaaatatcatttc 34008182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 36577416 - 36577481
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||| |||||||| || |||||||||||||||||  | |||| ||||||||||||    
T  36577416 aatgtgagtatgagagagaaagttgttgcaaaagttgtcacaaaatggatgttcaaatatcatttc 36577481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 3558932 - 3558848
Alignment:
Q  14 agagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||| ||||||| | ||||||| ||||||| |||||||||| | ||||||||||| |||    |||| |||||||||||||    
T  3558932 agagagaaagtaaaaacataatgtgagtatgagagagaaagttatcataaaagttgtcaaaaattgattgtataaatatcatttc 3558848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 4466778 - 4466722
Alignment:
Q  16 agagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtca 72  Q
    |||||| ||||||| | ||||| ||||||||| |||||||| |||||||||||||||    
T  4466778 agagaaagtaaaaacataatgtaaatatgagacagaaagttgttacaaaagttgtca 4466722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 105
Target Start/End: Complemental strand, 7128185 - 7128113
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttcactaaaa 105  Q
    ||||||||||||||| || ||||| || ||||||||||||| |||  | |||| |||||||||||| ||||||    
T  7128185 aatgtgaatatgagagaggaagttgttgcaaaagttgtcactaaatggatgttcaaatatcatttctctaaaa 7128113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 8411702 - 8411793
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttcactaaa 104  Q
    ||||||| || ||||||| | ||||||| ||||||| |||||||| || ||||||||||||| |||  | |||| |||||||||||| |||||    
T  8411702 agagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgttgcaaaagttgtcactaaatggatgttcaaatatcatttctctaaa 8411793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 19055524 - 19055440
Alignment:
Q  14 agagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||| ||||||||| ||||| ||||||  ||||||| || | | || |||| ||| |||| ||||||||||||||||||||    
T  19055524 agagagaaagtaaaaatataatgttaatatggaaaagaaaattgtcataatagttatcaaaaaatagttgtttaaatatcatttc 19055440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 37685416 - 37685333
Alignment:
Q  14 agagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||| ||||||| | ||||||| ||||||| |||||||| | ||||||||||| | ||||  |||||| ||||||||||||    
T  37685416 agagagaaagtaaaaagataatgtgagtatgagagagaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatttc 37685333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 37700102 - 37700185
Alignment:
Q  14 agagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||| ||||||| | ||||||| ||||||| |||||||| | ||||||||||| | ||||  |||||| ||||||||||||    
T  37700102 agagagaaagtaaaaagataatgtgagtatgagagagaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatttc 37700185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 48983673 - 48983737
Alignment:
Q  34 atgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||| ||||||| |||||||| | ||||||||||||| ||||  |||||| ||||||||||||    
T  48983673 atgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttc 48983737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 49647134 - 49647225
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttcactaaa 104  Q
    |||||||||| |||||| || ||||||||||||||| | ||||||   | |||| |||||| |||| ||||||| |||||||||||| |||||    
T  49647134 agagagagaaagtaaaa-tataatgtgaatatgagagataaagttcacataaaaattgtcaaaaaatagttgttcaaatatcatttctctaaa 49647225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 50775140 - 50775224
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatt 96  Q
    ||||||| || ||||||| | ||||||| ||||||| |||||||| | |||||| |||||| |||| | |||| |||||||||||    
T  50775140 agagagataaagtaaaaacataatgtgagtatgagagagaaagttgtcacaaaaattgtcaaaaaataattgtataaatatcatt 50775224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 98
Target Start/End: Complemental strand, 11947879 - 11947797
Alignment:
Q  16 agagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||| ||||| ||| ||||| | ||||||| |||||||| | ||||||||||||| ||||  |||||  ||||||||||||    
T  11947879 agagaaagtaaatatataatgtcagtatgagagagaaagttgtcacaaaagttgtcataaaatggttgtacaaatatcatttc 11947797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 12999810 - 12999891
Alignment:
Q  16 agagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||| ||||||||| ||||||| ||||||| |||||||| | ||||||||||| | ||||  |||||  ||||||||||||    
T  12999810 agagaaagtaaaaatataatgtgagtatgagagagaaagttgt-acaaaagttgttagaaaatggttgtacaaatatcatttc 12999891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 16263513 - 16263427
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||||||  |||||||| ||||||||||||||||| ||| || | | ||||||||| | |||| | ||||  ||||||||||||    
T  16263513 agagagagaaaataaaaatataatgtgaatatgagaaaaaaaattgtcataaaagttgttagaaaataattgtacaaatatcatttc 16263427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 21433384 - 21433470
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||||||  |||||| | ||||||| ||| ||| |||||||| | ||||||||||| ||||||  |||||  ||||||||||||    
T  21433384 agagagagaaaataaaaacataatgtgagtataagagagaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcatttc 21433470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 27465041 - 27465126
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| || ||||||| |  |||||| ||||||| |||||||| | ||||||||||| | ||||  |||||||||||||||||||    
T  27465041 agagagacaaagtaaaaagatcatgtgagtatgagagagaaagttgtcacaaaagttgt-aaaaaatggttgtttaaatatcatttc 27465126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 29359724 - 29359670
Alignment:
Q  14 agagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagtt 68  Q
    |||||||| ||||||| | ||||||| ||||||| |||||||| |||||||||||    
T  29359724 agagagaaagtaaaaagataatgtgagtatgagagagaaagttgttacaaaagtt 29359670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 34173653 - 34173600
Alignment:
Q  23 gtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaa 77  Q
    ||||||||||||||||| ||||||||||||| ||| | |||||||| ||||||||    
T  34173653 gtaaaaatacaatgtgagtatgagaaagaaattta-tccaaaagttatcacaaaa 34173600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 43367896 - 43367950
Alignment:
Q  23 gtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaa 77  Q
    ||||||| | ||||||| ||||||||||||| || | ||||||||||||||||||    
T  43367896 gtaaaaacataatgtgagtatgagaaagaaaattctcacaaaagttgtcacaaaa 43367950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 48326055 - 48325969
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| || ||||||| | ||||| | ||||||| |||||||| || ||||||||||||||||| || |  | ||||||||||||    
T  48326055 agagagataaagtaaaaaaataatgtaagtatgagagagaaagttgttgcaaaagttgtcacaaaatagattatcaaatatcatttc 48325969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 48858911 - 48858825
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||| | ||||||  | ||||||| ||||||| |||||||| | ||||||||||||| |||   |||||| ||||||||||||    
T  48858911 agagagaggaagtaaaatgataatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcatttc 48858825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 50726232 - 50726317
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| ||||||| | ||||| ||| ||||| |||||||| | || |||||||| | |||| ||||||| ||||||||||||    
T  50726232 agagagagaaagtaaaaagataatgtaaatgtgagagagaaagttgtcactaaagttgtaa-aaaatagttgttgaaatatcatttc 50726317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 52362569 - 52362484
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| || ||||||| | ||||||| ||||||| |||||||| | ||||||||||||| ||||  | |||| ||||||||||||    
T  52362569 agagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttc 52362484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 3603178 - 3603113
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||| |||||||| || ||||||||||||| |||  | |||| ||||||||||||    
T  3603178 aatgtgagtatgagagagaaagttgttgcaaaagttgtcactaaatggatgttcaaatatcatttc 3603113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 10890050 - 10890115
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||| |||||||| | ||||||||||||| ||||  | |||| ||||||||||||    
T  10890050 aatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttc 10890115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 13489729 - 13489664
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||| |||||||| | ||||||||||||| ||||  | |||| ||||||||||||    
T  13489729 aatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttc 13489664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 15705066 - 15705131
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||| |||||||| | ||||||||||||| ||||  | |||| ||||||||||||    
T  15705066 aatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttc 15705131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 30735277 - 30735361
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcattt 97  Q
    |||||||||| ||||||| | ||||||| ||||||| | |||||| | ||||||||||| | ||||  |||||| |||||||||||    
T  30735277 agagagagaaagtaaaaaaataatgtgagtatgagagaaaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcattt 30735361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 35529364 - 35529449
Alignment:
Q  13 gagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||||| ||||||| | ||||||| | ||||| | |||||| | ||||||||||||  ||| | |||||| ||||||||||||    
T  35529364 gagagagaaagtaaaaagagaatgtgagtttgagagaaaaagttgtcacaaaagttgtctaaaatcggttgttcaaatatcatttc 35529449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 35846305 - 35846366
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaa 76  Q
    ||||||||||  |||||| | || |||| |||||||||||||||||||| |||||||||||||||    
T  35846305 agagagagaa--taaaaacataacgtgagtatgagaaagaaagttatta-aaaagttgtcacaaa 35846366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 44294082 - 44294017
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||| ||||| ||||| ||||| ||||||||||| || | || ||||||||||||    
T  44294082 aatgtgagtatgagagagaaaattattgcaaaaattgtcacaaaatagatattcaaatatcatttc 44294017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 47642611 - 47642676
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||| |||||||| | ||||||||| ||| ||||  |||||| ||||||||||||    
T  47642611 aatgtgagtatgagagagaaagttgtcacaaaagttatcaaaaaatggttgttcaaatatcatttc 47642676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 51286371 - 51286436
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||| |||||||| | ||||||||||||| |||| |  |||| ||||||||||||    
T  51286371 aatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaataaatgttcaaatatcatttc 51286436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 1689473 - 1689393
Alignment:
Q  18 agaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||| ||||| ||| ||||||| ||||||| |||||||| | |||||| |||| | |||| ||||||  ||||||||||||    
T  1689473 agaaagtaaatatataatgtgagtatgagagagaaagttgtcacaaaaattgttataaaatagttgtacaaatatcatttc 1689393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 33 - 105
Target Start/End: Original strand, 4514458 - 4514530
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttcactaaaa 105  Q
    ||||||||||||||| |||||||| || |||||||||| || |||  | | || |||||||||||| ||||||    
T  4514458 aatgtgaatatgagatagaaagttgttgcaaaagttgtaactaaatggatattaaaatatcatttctctaaaa 4514530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 7078506 - 7078569
Alignment:
Q  34 atgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||| ||||||| |||||||| || ||||||||||||||||| || |||  ||||||||||||    
T  7078506 atgtgagtatgagagagaaagttgtt-caaaagttgtcacaaaatagatgtacaaatatcatttc 7078569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 8350182 - 8350265
Alignment:
Q  14 agagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||| ||||||| |  |||||| ||||||| |||||||| | ||||||||||| | ||||  |||||| ||||||||||||    
T  8350182 agagagaaagtaaaaagatcatgtgagtatgagagagaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatttc 8350265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 14983860 - 14983816
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagtt 56  Q
    |||||||||| ||||||| | ||||||||||||||| ||||||||    
T  14983860 agagagagaaagtaaaaacataatgtgaatatgagagagaaagtt 14983816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 18610838 - 18610775
Alignment:
Q  34 atgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||| ||||||| |||||||| | | |||||||||||||||| ||||||  ||||||||||||    
T  18610838 atgtgagtatgagagagaaagttgtaa-aaaagttgtcacaaaatagttgtacaaatatcatttc 18610775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 19651475 - 19651412
Alignment:
Q  34 atgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||| ||||||| |||||||||| ||||||||||||||||||  |||||   |||||||||||    
T  19651475 atgtgagtatgagagagaaagttat-acaaaagttgtcacaaaatggttgtaggaatatcatttc 19651412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 27742703 - 27742619
Alignment:
Q  14 agagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||| ||| ||  ||||||||  ||||||| |||||||| | ||||||||||||| |||   |||||| ||||||||||||    
T  27742703 agagagaatgtagaagaacaatgtgtgtatgagagagaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcatttc 27742619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 36954745 - 36954701
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagtt 56  Q
    |||||||||| ||||||| | ||||||| ||||||||||||||||    
T  36954745 agagagagaaagtaaaaacataatgtgagtatgagaaagaaagtt 36954701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 37588680 - 37588744
Alignment:
Q  34 atgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||| ||||| | |||||||| | |||||||||||||||||| |  |||| ||||||||||||    
T  37588680 atgtgagtatgaaagagaaagttgtaacaaaagttgtcacaaaataaatgttcaaatatcatttc 37588744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 44789148 - 44789212
Alignment:
Q  34 atgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||| ||||| | |||||||| | ||||||||||||||||||  | |||| ||||||||||||    
T  44789148 atgtgagtatgaaagagaaagttgtaacaaaagttgtcacaaaatggatgttcaaatatcatttc 44789212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 46172411 - 46172451
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcac 73  Q
    ||||||| ||||||| ||||| |||||||||||||||||||    
T  46172411 aatgtgagtatgagagagaaaattattacaaaagttgtcac 46172451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 51718610 - 51718654
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagtt 56  Q
    |||||||||||||||||| | ||||||| ||||||| ||||||||    
T  51718610 agagagagaaggtaaaaagataatgtgagtatgagagagaaagtt 51718654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 1e-20; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 12 - 103
Target Start/End: Complemental strand, 10811223 - 10811132
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttcactaa 103  Q
    |||||||||||||||||| ||||||||| ||||||| |||||||| | ||||||||||||| ||||  |||||| |||||||||||| ||||    
T  10811223 agagagagaaggtaaaaacacaatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggttgttcaaatatcatttctctaa 10811132  T

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Target: chr3; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 48405498 - 48405412
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| ||||||| | ||||||| ||||||| |||||||| ||||||||||||||||||||  |||||  ||||||||||||    
T  48405498 agagagagaaagtaaaaacataatgtgagtatgagagagaaagttgttacaaaagttgtcacaaaatggttgtacaaatatcatttc 48405412  T

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Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 105
Target Start/End: Complemental strand, 8821717 - 8821625
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttcactaaaa 105  Q
    ||||||| || ||||||| | ||||||| ||||||| |||||||| |||||||||||||||| ||| || |||| |||||||||||| ||||||    
T  8821717 agagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgttacaaaagttgtcactaaatagatgttcaaatatcatttctctaaaa 8821625  T

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Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 45293014 - 45293098
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||||||  |||||||| ||||||| ||||||| |||||||| | |||||||||||   |||| ||||||||||||||||||||    
T  45293014 agagagagaa--taaaaatataatgtgagtatgagagagaaagttgtcacaaaagttgtttaaaaatagttgtttaaatatcatttc 45293098  T

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Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 25188448 - 25188534
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| ||| ||  ||||||||| || |||| |||||||| || |||||||||||| |||| ||||||| ||||||||||||    
T  25188448 agagagagaaagtataaggacaatgtgagtaagagagagaaagttgttgcaaaagttgtcaaaaaatagttgttcaaatatcatttc 25188534  T

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Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 26452706 - 26452791
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcattt 97  Q
    |||||||||| ||||||||| ||||||| ||||||| |||||||| | ||||||||||| | ||||  ||||| || |||||||||    
T  26452706 agagagagaaagtaaaaatataatgtgagtatgagagagaaagttgtaacaaaagttgttagaaaatggttgtatatatatcattt 26452791  T

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Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 288813 - 288727
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| ||||||| | ||||||| ||||||| |||||||| | ||||||||| | | ||||  |||||| ||||||||||||    
T  288813 agagagagaaagtaaaaaaataatgtgagtatgagagagaaagttgtcacaaaagttataaaaaaattgttgttcaaatatcatttc 288727  T

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Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 6178409 - 6178494
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| ||||||| | ||||||| ||||||| ||||| || | ||||||||||||| |||| ||||||  ||||||||||||    
T  6178409 agagagagaaagtaaaaacataatgtgagtatgagagagaaaattgtcacaaaagttgtca-aaaatagttgtacaaatatcatttc 6178494  T

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Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 7867695 - 7867780
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||  |||| |||| ||||||| ||||||||||||| || ||  |||||||||||||||| ||||||  ||||||||||||    
T  7867695 agagagagagagtaagaatataatgtgagtatgagaaagaaaattgttt-aaaagttgtcacaaaatagttgtacaaatatcatttc 7867780  T

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Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 26014899 - 26014814
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| ||||||| | ||||||| ||||||| |||||||| | ||||||||||| | ||||  |||||| ||||||||||||    
T  26014899 agagagagaaagtaaaaagataatgtgagtatgagagagaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatttc 26014814  T

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Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 34456878 - 34456792
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| ||||||| | ||| ||| ||||||| |||||||||| ||||||||||||| |||   ||| || ||||||||||||    
T  34456878 agagagagaaagtaaaaagataatatgagtatgagagagaaagttatcacaaaagttgtcaaaaagtggttattcaaatatcatttc 34456792  T

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Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 34627867 - 34627937
Alignment:
Q  14 agagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgt 84  Q
    |||||||| ||||||||| ||| ||| ||| | |||||||||||| ||||||||||||| |||| ||||||    
T  34627867 agagagaaagtaaaaatataatatgagtataaaaaagaaagttatcacaaaagttgtcaaaaaatagttgt 34627937  T

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Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 37302633 - 37302548
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| |||||||   ||||||||||||||| |||||||| | ||||||||||| | ||||  |||||| ||||||||||||    
T  37302633 agagagagaaagtaaaaaggtaatgtgaatatgagagagaaagttgtcacaaaagttgt-aaaaaatggttgttaaaatatcatttc 37302548  T

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Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 102
Target Start/End: Original strand, 45711423 - 45711512
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttcacta 102  Q
    |||||||||| ||||||| | ||||||| ||||||| ||||| || | ||||||||||| | ||||  |||||| ||||||||||||||||    
T  45711423 agagagagaaagtaaaaagataatgtgagtatgagagagaaaattgtcacaaaagttgt-aaaaaattgttgttcaaatatcatttcacta 45711512  T

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Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 33 - 103
Target Start/End: Original strand, 50206974 - 50207044
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttcactaa 103  Q
    ||||||| ||||||| |||||||| || |||||||||||||||||  | |||| |||||||||||| ||||    
T  50206974 aatgtgagtatgagagagaaagttgttgcaaaagttgtcacaaaatggatgttcaaatatcatttctctaa 50207044  T

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Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 50559195 - 50559281
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| ||||||| | ||||| | ||||||| ||||| || | ||||||||||||| |||| ||||||  ||||||||||||    
T  50559195 agagagagaaagtaaaaacataatgtaagtatgagagagaaaattgtcacaaaagttgtcaaaaaatagttgtacaaatatcatttc 50559281  T

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Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 3648665 - 3648588
Alignment:
Q  14 agagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaata 91  Q
    ||||| || ||||||||||||||||||||||||| ||||| || | ||||||||| ||| ||||  |||||| |||||    
T  3648665 agagataaagtaaaaatacaatgtgaatatgagagagaaaattgtcacaaaagttatcataaaatggttgttcaaata 3648588  T

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Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 14207262 - 14207327
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||| |||||||| | ||||||||||| ||||||  |||||| ||||||||||||    
T  14207262 aatgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatcgttgttcaaatatcatttc 14207327  T

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Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 14215010 - 14215075
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||| |||||||| | ||||||||||| ||||||  |||||| ||||||||||||    
T  14215010 aatgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatcgttgttcaaatatcatttc 14215075  T

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Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 24482967 - 24483032
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||| |||||||| || |||||||||||||||||  | |||| ||||||||||||    
T  24482967 aatgtgagtatgagagagaaagttgttgcaaaagttgtcacaaaatggatgttcaaatatcatttc 24483032  T

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Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 41505578 - 41505494
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcattt 97  Q
    |||||||||| ||||||| | ||||||| ||||||| |||||||| | ||||||||||| | |||| | ||||| |||||||||||    
T  41505578 agagagagaaagtaaaaagataatgtgagtatgagagagaaagttgtcacaaaagttgt-aaaaaataattgttcaaatatcattt 41505494  T

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Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 44463445 - 44463384
Alignment:
Q  11 cagagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtca 72  Q
    |||| ||||||  |||||||| ||||||| ||||||| |||||||||| |||||||||||||    
T  44463445 cagaaagagaaaataaaaatataatgtgagtatgagagagaaagttatcacaaaagttgtca 44463384  T

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Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 12 - 105
Target Start/End: Complemental strand, 44813221 - 44813129
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttcactaaaa 105  Q
    |||||||||| || |||| | ||||||| ||||||| |||||| | | |||||| |||| | |||| |||||||||||||||||||| ||||||    
T  44813221 agagagagaaagttaaaaaataatgtgagtatgagagagaaagctgtcacaaaaattgtaa-aaaatagttgtttaaatatcatttctctaaaa 44813129  T

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Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 46019529 - 46019464
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||| |||||||| | |||||||||||| ||||| || |||| ||||||||||||    
T  46019529 aatgtgagtatgagagagaaagttgtcacaaaagttgtcgcaaaatagatgttcaaatatcatttc 46019464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 49417642 - 49417577
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||| |||||||| | ||||||||||||| |||| || |||| ||||||||||||    
T  49417642 aatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatagatgttcaaatatcatttc 49417577  T

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Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 39629822 - 39629906
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatt 96  Q
    |||||||||| ||||||| | ||||||| ||||||| |||| ||| | ||||||||||| | |||| ||||||  ||||||||||    
T  39629822 agagagagaaagtaaaaacataatgtgagtatgagagagaaggttgtcacaaaagttgtaaaaaaatagttgtacaaatatcatt 39629906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 44413906 - 44413962
Alignment:
Q  14 agagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgt 70  Q
    |||||||||||||||| | ||||||| ||||||| |||||||| | |||||||||||    
T  44413906 agagagaaggtaaaaagataatgtgagtatgagagagaaagttgtcacaaaagttgt 44413962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 98
Target Start/End: Complemental strand, 9862602 - 9862535
Alignment:
Q  31 acaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||||| |||||||| | |||||||||| || ||||  |||||| ||||||||||||    
T  9862602 acaatgttaatatgagagagaaagttgtcacaaaagttgacaaaaaatggttgttcaaatatcatttc 9862535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 99
Target Start/End: Complemental strand, 33939323 - 33939237
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttca 99  Q
    |||||||||| ||||||| | ||||||||||||||| |||||||| | |||||| || | | ||||  |||||| |||||||||||||    
T  33939323 agagagagaaagtaaaaagataatgtgaatatgagagagaaagttgtcacaaaaattat-aaaaaatggttgttcaaatatcatttca 33939237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 103
Target Start/End: Complemental strand, 38926715 - 38926625
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttcactaa 103  Q
    |||||||||| ||||||| | ||||||| ||||||| |||||||| | ||||| ||||| | ||||  |||||| |||||||||||| ||||    
T  38926715 agagagagaaagtaaaaagataatgtgagtatgagagagaaagttgtcacaaacgttgtaa-aaaatggttgttcaaatatcatttctctaa 38926625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 47472417 - 47472331
Alignment:
Q  11 cagagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||||||| ||||||| | ||| ||| ||||||| |||||||| | ||||||||||| | ||||  |||||| ||||||||||||    
T  47472417 cagagagagaaagtaaaaagataatatgagtatgagagagaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatttc 47472331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 103
Target Start/End: Complemental strand, 48287759 - 48287668
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttcactaa 103  Q
    ||||||||||  | |||||| |||||||  |||||||||||| |||| ||||||||||| | ||||  |||||  |||||||||||| ||||    
T  48287759 agagagagaaaattaaaatataatgtgagaatgagaaagaaaattatcacaaaagttgttataaaatggttgtacaaatatcatttctctaa 48287668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 5244316 - 5244258
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgt 70  Q
    |||||||||| ||||||| | ||||||| ||||||| |||||||| | |||||||||||    
T  5244316 agagagagaaagtaaaaaaataatgtgagtatgagagagaaagttgtcacaaaagttgt 5244258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 9692813 - 9692727
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| ||||||  | ||||||||||||||| |||||||||| |||||| |||  | |||   |||||||||||| ||||||    
T  9692813 agagagagaaagtaaaatgataatgtgaatatgagagagaaagttatcacaaaaattgataaaaagtggttgtttaaataccatttc 9692727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 13348118 - 13348204
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtc-acaaaacagttgtttaaatatcattt 97  Q
    |||||||||||||||||| | | ||||| ||||  | |||||||||| |||||| ||||| | |||| ||||||| |||||||||||    
T  13348118 agagagagaaggtaaaaacatattgtgagtatggaagagaaagttatcacaaaaattgtctaaaaaatagttgttcaaatatcattt 13348204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 16969554 - 16969635
Alignment:
Q  16 agagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||| ||||||| | ||||||| ||||||| |||||||| | | ||||||||||| ||||  |||||| ||||||||||||    
T  16969554 agagaaagtaaaaagataatgtgagtatgagagagaaagttgtcaaaaaagttgtca-aaaatggttgttaaaatatcatttc 16969635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 25847085 - 25847171
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaac-agttgtttaaatatcattt 97  Q
    |||||||||| ||||||| | ||||| | ||| ||| |||||||||| | |||| |||||| ||||  |||||||||||||||||||    
T  25847085 agagagagaaagtaaaaacataatgtaagtataagagagaaagttatcataaaaattgtcaaaaaaatagttgtttaaatatcattt 25847171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 26550325 - 26550239
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| |||||| || ||||||||||||||| |||||||| | |||||| || | | ||||  |||||  ||||||||||||    
T  26550325 agagagagaaagtaaaattataatgtgaatatgagagagaaagttgtcacaaaaattattaaaaaatggttgtgcaaatatcatttc 26550239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 98
Target Start/End: Original strand, 32146009 - 32146055
Alignment:
Q  52 aagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||||||||| |||| ||||||| ||||||||||||    
T  32146009 aagttatcacaaaagttgtcaaaaaatagttgttcaaatatcatttc 32146055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 98
Target Start/End: Complemental strand, 46623990 - 46623909
Alignment:
Q  16 agagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||| ||||||| | ||||||||||| ||| |||||||| | ||||||||||| | ||||  |||||| ||||||||||||    
T  46623990 agagaaagtaaaaagataatgtgaatatcagagagaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatttc 46623909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 48353084 - 48353026
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgt 70  Q
    |||||||||| ||||||||| ||| ||| ||||||| |||||||| | |||||||||||    
T  48353084 agagagagaaagtaaaaatataatatgagtatgagagagaaagttgtcacaaaagttgt 48353026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 98
Target Start/End: Complemental strand, 51873469 - 51873395
Alignment:
Q  24 taaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||||||||||||||||   | ||||| || | | |||| ||||||||||| ||||||| ||||||||||||    
T  51873469 taaaaatacaatgtgaatatttaagagaaaattgtcataaaaattgtcacaaaatagttgttcaaatatcatttc 51873395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 52417854 - 52417812
Alignment:
Q  11 cagagagagaaggtaaaaatacaatgtgaatatgagaaagaaa 53  Q
    ||||||||||| ||||||||||||||||||||| | |||||||    
T  52417854 cagagagagaaagtaaaaatacaatgtgaatataaaaaagaaa 52417812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 54773737 - 54773823
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| || ||||||| | ||| ||| ||||||| |||||||| ||| |||||||||||| |||  | |||| ||||||||||||    
T  54773737 agagagataaagtaaaaaaataatatgagtatgagagagaaagttgttataaaagttgtcactaaatggatgttcaaatatcatttc 54773823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 3347126 - 3347191
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||||||||||| |||||||| |  |||||||| ||||||||  | |||| ||||||||||||    
T  3347126 aatgtgaatatgagagagaaagttgtagcaaaagttatcacaaaatggatgttcaaatatcatttc 3347191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 10206977 - 10207042
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||| |||||||| || ||||||||||||| |||  | |||| ||||||||||||    
T  10206977 aatgtgagtatgagagagaaagttgttgcaaaagttgtcactaaatggatgttcaaatatcatttc 10207042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 105
Target Start/End: Original strand, 19150303 - 19150395
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttcactaaaa 105  Q
    |||||||||| |||||| || ||||| ||||||||| |||||||| | ||||||||||| | ||||   ||||  |||||||||||| ||||||    
T  19150303 agagagagaaagtaaaa-tataatgtaaatatgagagagaaagttgtcacaaaagttgttaaaaaatgattgtacaaatatcatttctctaaaa 19150395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 39697226 - 39697291
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||| |||||||| |||||||| || ||||||||  | |||| ||||||||||||    
T  39697226 aatgtgagtatgagagagaaagttgttacaaaaattatcacaaaatggatgttcaaatatcatttc 39697291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 98
Target Start/End: Complemental strand, 44855309 - 44855253
Alignment:
Q  41 tatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| |||||||||| |||||||||||||||||| |||| |  ||||||||||||    
T  44855309 tatgagagagaaagttat-acaaaagttgtcacaaaatagttatacaaatatcatttc 44855253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 49167838 - 49167753
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcattt 97  Q
    ||||||| || ||||||||| ||||||  ||||||| |||||||| | |||||||||||||  |||  | |||| |||||||||||    
T  49167838 agagagataaagtaaaaatataatgtgtgtatgagagagaaagttgtcacaaaagttgtcatcaaatggatgttcaaatatcattt 49167753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 49363255 - 49363320
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||| |||||||| || ||||||||||||| |||  | |||| ||||||||||||    
T  49363255 aatgtgagtatgagagagaaagttgttgcaaaagttgtcactaaatggatgttcaaatatcatttc 49363320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 49780735 - 49780808
Alignment:
Q  25 aaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||| ||||||||||| |||||||| | |||||||||||   ||||   ||||||||||||||||||    
T  49780735 aaaaatataatatgaatatgagatagaaagttgtcacaaaagttgtgcaaaaatgattgtttaaatatcatttc 49780808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 53871016 - 53871057
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaa 53  Q
    |||||||||||||||||| | ||||||||||||||| |||||    
T  53871016 agagagagaaggtaaaaacaaaatgtgaatatgagagagaaa 53871057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 55400066 - 55400001
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||| |||||||| | ||||||||||||| ||||  | |||| ||||||||||||    
T  55400066 aatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttc 55400001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 68
Target Start/End: Complemental strand, 6823054 - 6823022
Alignment:
Q  36 gtgaatatgagaaagaaagttattacaaaagtt 68  Q
    ||||||||||||||||||||||| |||||||||    
T  6823054 gtgaatatgagaaagaaagttatcacaaaagtt 6823022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 11327173 - 11327110
Alignment:
Q  34 atgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||| ||||||| |||||||| | ||||||||||||||||||  |||||  ||||||||||||    
T  11327173 atgtgagtatgagagagaaagttgt-acaaaagttgtcacaaaatggttgtacaaatatcatttc 11327110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 29573361 - 29573425
Alignment:
Q  34 atgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||| ||||||| |||||||| | ||||||||||| ||||||  |||||  ||||||||||||    
T  29573361 atgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcatttc 29573425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 32187208 - 32187144
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcattt 97  Q
    ||||||||||||||| |||| ||| | | ||||||||||||||||  |||||  |||||||||||    
T  32187208 aatgtgaatatgagagagaaggttgtcataaaagttgtcacaaaatggttgtacaaatatcattt 32187144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 32363019 - 32362935
Alignment:
Q  14 agagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||| ||||||  ||||||||  ||||||| | |||||| | | ||||||||||| ||||  |||||| ||||||||||||    
T  32363019 agagagaaagtaaaagaacaatgtgtgtatgagagataaagttgtcataaaagttgtcaaaaaatggttgttcaaatatcatttc 32362935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 98
Target Start/End: Complemental strand, 33374566 - 33374494
Alignment:
Q  26 aaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||| ||||||| ||||||| |||||||||| | |||| |||||| ||||  ||| || ||||||||||||    
T  33374566 aaaatataatgtgagtatgagagagaaagttatcataaaaattgtcataaaatggttattcaaatatcatttc 33374494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 37927210 - 37927274
Alignment:
Q  34 atgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||| ||||||| |||||||| | |||||||||||||| |||  | |||| ||||||||||||    
T  37927210 atgtgagtatgagagagaaagttgtcacaaaagttgtcaccaaatggatgttcaaatatcatttc 37927274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 41443174 - 41443234
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtca 72  Q
    |||||||||| ||||||  | ||||||| ||||||| ||||| |||| |||||||||||||    
T  41443174 agagagagaaagtaaaagaataatgtgagtatgagagagaaaattatcacaaaagttgtca 41443234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 42672819 - 42672903
Alignment:
Q  13 gagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcattt 97  Q
    ||||||||| ||||||| | ||||||||||||||| | ||| || | |||||| || ||| |||| ||||||  |||||||||||    
T  42672819 gagagagaaagtaaaaacataatgtgaatatgagagaaaaatttgtcacaaaaattatcaaaaaatagttgtgcaaatatcattt 42672903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 49021787 - 49021743
Alignment:
Q  24 taaaaatacaatgtgaatatgagaaagaaagttattacaaaagtt 68  Q
    |||||||| ||||||| |||||||||||||||| | |||||||||    
T  49021787 taaaaatataatgtgagtatgagaaagaaagttgtcacaaaagtt 49021743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 2e-19; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 13309970 - 13309885
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcattt 97  Q
    |||||||||| ||||||| | ||||||||||||||| |||||||||| |||||| |||||| |||| ||||||| |||||||||||    
T  13309970 agagagagaaagtaaaaacataatgtgaatatgagagagaaagttatcacaaaaattgtcaaaaaatagttgttcaaatatcattt 13309885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 7287173 - 7287258
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcattt 97  Q
    |||||||||| ||||||||| ||||||| ||||| | |||||||| | ||||||||||| | ||||  ||||||||||||||||||    
T  7287173 agagagagaaagtaaaaatataatgtgagtatgaaagagaaagttgtcacaaaagttgtaaaaaaatggttgtttaaatatcattt 7287258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 19844294 - 19844378
Alignment:
Q  14 agagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||| ||||||| | |||||| |||||||| |||||||||| ||||||||| ||| |||| ||||||  ||||||||||||    
T  19844294 agagagaaagtaaaaacataatgtggatatgagagagaaagttatcacaaaagttatcaaaaaatagttgtacaaatatcatttc 19844378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 41173318 - 41173254
Alignment:
Q  34 atgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||| ||||||| |||||||| ||||||||||||||||||||  | |||||||||||||||||    
T  41173318 atgtgagtatgagagagaaagttgttacaaaagttgtcacaaaatggatgtttaaatatcatttc 41173254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 98
Target Start/End: Original strand, 24468272 - 24468355
Alignment:
Q  15 gagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||||| ||||||| ||||||| |||||||||| |||||||||||   ||||  |||||| ||||||||||||    
T  24468272 gagagaaagtaaaaatataatgtgagtatgagatagaaagttatcacaaaagttgtttaaaaatggttgttcaaatatcatttc 24468355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 22098343 - 22098257
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| ||||||||| ||||||| ||||||| |||||||| | ||||||||||| | ||||  |||||  ||||||||||||    
T  22098343 agagagagaaagtaaaaatataatgtgagtatgagagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcatttc 22098257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 43196609 - 43196693
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcattt 97  Q
    ||||||| || ||||||| | ||||||| |||||||||||||||| | |||||| ||||||||||| |  ||||||||||||||||    
T  43196609 agagagataaagtaaaaa-ataatgtgagtatgagaaagaaagttgtaacaaaaattgtcacaaaataaatgtttaaatatcattt 43196693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 26686967 - 26686883
Alignment:
Q  14 agagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||| ||||||||| ||||||||||||||| |||||||| | |||||| || | | |||| | |||| |||||||||||||    
T  26686967 agagagaaagtaaaaatataatgtgaatatgagagagaaagttgtcacaaaaattattaaaaaataattgtataaatatcatttc 26686883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 26956698 - 26956614
Alignment:
Q  14 agagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||| ||||||||| ||||||||||||||| |||||||| | |||||| || | | |||| | |||| |||||||||||||    
T  26956698 agagagaaagtaaaaatataatgtgaatatgagagagaaagttgtcacaaaaattattaaaaaataattgtataaatatcatttc 26956614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 103
Target Start/End: Original strand, 42446293 - 42446365
Alignment:
Q  31 acaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttcactaa 103  Q
    ||||||||| || |||| |||||||| || |||||||||||| |||| ||||||| |||||||||||| ||||    
T  42446293 acaatgtgagtaagagagagaaagttgttgcaaaagttgtcaaaaaatagttgttcaaatatcatttctctaa 42446365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 31 - 98
Target Start/End: Original strand, 32872900 - 32872967
Alignment:
Q  31 acaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||||| ||||| ||||||| || | ||||||||||||| |||| ||||||| ||||||||||||    
T  32872900 acaatgtgagtatgaaaaagaaaattgtcacaaaagttgtcaaaaaatagttgttcaaatatcatttc 32872967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 14321938 - 14322024
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||||||  |||| ||||||| ||||||||||| |||||||| | ||||||||||| | ||||  |||||  ||||||||||||    
T  14321938 agagagagaaaataaatatacaatatgaatatgagagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcatttc 14322024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 30640877 - 30640792
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| || ||||||| | ||||| ||||||||| |||||||| | ||||||||||||||||||  | |||| ||||||||||||    
T  30640877 agagagataaagtaaaaa-ataatgtaaatatgagagagaaagttgtaacaaaagttgtcacaaaatggatgttcaaatatcatttc 30640792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 35098989 - 35099074
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| || ||||||| | ||||||| ||||||| |||||||| || ||||||||||||| ||| || |||| ||||||||||||    
T  35098989 agagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgttgcaaaagttgtcactaaatagatgttcaaatatcatttc 35099074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 38293342 - 38293428
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||||||||||||| ||||||| ||||| | |||||||| | |||||| |||| | ||||  |||||  ||||||||||||    
T  38293342 agagagagaaggtaaaaatataatgtgagtatgatagagaaagttgtcacaaaaattgttataaaatggttgtaaaaatatcatttc 38293428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 98
Target Start/End: Complemental strand, 611958 - 611866
Alignment:
Q  6 agcagcagagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||| ||||||||||  |||||  | ||||||| ||||||| |||||||| | ||||||||||||| |||  | ||||| ||||||||||||    
T  611958 agcagtagagagagaaaataaaatgataatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaagtaattgttcaaatatcatttc 611866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 8920144 - 8920080
Alignment:
Q  34 atgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||| ||||||| |||||||| | ||||||||||||||||||  | |||| ||||||||||||    
T  8920144 atgtgagtatgagagagaaagttgtcacaaaagttgtcacaaaatggatgttcaaatatcatttc 8920080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 16437548 - 16437607
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtc 71  Q
    ||||||| |||||||||| | ||||||| ||||||| |||||||| || |||||||||||    
T  16437548 agagagataaggtaaaaaaataatgtgagtatgagagagaaagttgttgcaaaagttgtc 16437607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 105
Target Start/End: Complemental strand, 18695384 - 18695313
Alignment:
Q  34 atgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttcactaaaa 105  Q
    |||||| ||||||| |||||||| | ||||||||||| ||||||  |||||  |||||||||||| ||||||    
T  18695384 atgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcatttctctaaaa 18695313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 27546140 - 27546065
Alignment:
Q  23 gtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||||| ||||||| ||||||||| |||||| | |||||| |||||| ||||   ||||| ||||||||||||    
T  27546140 gtaaaaatataatgtgagtatgagaaataaagttgtcacaaaatttgtcataaaatgattgttcaaatatcatttc 27546065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 29803301 - 29803227
Alignment:
Q  23 gtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||| |||| ||||||||||||||| |||||||| ||  ||||||||||| |||| ||||||  ||||||||||||    
T  29803301 gtaagaatataatgtgaatatgagagagaaagttgtt-taaaagttgtcaaaaaatagttgtacaaatatcatttc 29803227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 15267871 - 15267786
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| || ||||||| | ||| ||||||||||| |||||||| || ||||||||||||| |||  | |||| ||||||||||||    
T  15267871 agagagataaagtaaaaa-ataatatgaatatgagagagaaagttgttgcaaaagttgtcactaaatggatgttaaaatatcatttc 15267786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 105
Target Start/End: Original strand, 17097804 - 17097878
Alignment:
Q  31 acaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttcactaaaa 105  Q
    ||||||||| ||||||| ||||| || | ||||||||| ||| ||||  |||||| |||||||||||| ||||||    
T  17097804 acaatgtgagtatgagatagaaaattgtcacaaaagttatcaaaaaatggttgttcaaatatcatttctctaaaa 17097878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 17402905 - 17402991
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| || ||||||||| ||||||  ||||||| |||||||| | |||||| ||||||| |||  | |||| ||||||||||||    
T  17402905 agagagataaagtaaaaatataatgtgtctatgagatagaaagttgtcacaaaaattgtcaccaaatggatgttcaaatatcatttc 17402991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 18660846 - 18660761
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| ||||||| | || |||| ||||||| ||||| || | ||||||||||||| ||||  |||||| ||||||||||||    
T  18660846 agagagagaaagtaaaaagataacgtgagtatgagagagaaaattgtcacaaaagttgtca-aaaatggttgttcaaatatcatttc 18660761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 98
Target Start/End: Complemental strand, 21156071 - 21155989
Alignment:
Q  16 agagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||| || |||||| ||||||| ||||| | |||||| | | ||||||||||||| ||||  |||||| ||||||||||||    
T  21156071 agagaaagtgaaaatataatgtgagtatgaaagagaaaggtgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttc 21155989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 21922128 - 21922214
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||||||  ||| ||||  |||||| ||||||| |||||||| | ||||| ||||||||||||  | |||| ||||||||||||    
T  21922128 agagagagaaaataagaatatgatgtgagtatgagagagaaagttgtcacaaacgttgtcacaaaatggatgttcaaatatcatttc 21922214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 37700547 - 37700462
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| |||||||||| | ||||||| ||||||| |||||||||| |||| | ||||||| |||  | |||| ||||||||||||    
T  37700547 agagagataaggtaaaaa-ataatgtgagtatgagagagaaagttatcacaataattgtcaccaaatggatgttcaaatatcatttc 37700462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 41175690 - 41175775
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| || ||||||| | ||||||| ||||||| |||||||| | ||||||||| || ||||| || |||| ||||||||||||    
T  41175690 agagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgtcacaaaagttatcccaaaatagatgttcaaatatcatttc 41175775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 125158 - 125094
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||| |||||||||||||| | |||||||||||||||  ||||||  ||||||||||||    
T  125158 aatgtgagtattagaaagaaagttatca-aaaagttgtcacaaagtagttgtacaaatatcatttc 125094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 4088531 - 4088434
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttcactaaaattaa 109  Q
    ||||| |||| ||||||||| ||||||| ||||| | |||||||| | ||||||||||| | ||||  | |||  |||||||||||| ||||| ||||    
T  4088531 agagaaagaaagtaaaaatataatgtgagtatgaaagagaaagttgtcacaaaagttgttataaaatggatgtacaaatatcatttctctaaatttaa 4088434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 6446522 - 6446587
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||| |||||||| | |||||||||||| ||||| || | || ||||||||||||    
T  6446522 aatgtgagtatgagagagaaagttgtcacaaaagttgtcgcaaaatagatcttcaaatatcatttc 6446587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 6517779 - 6517714
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||| |||||||| | ||||||||||||| ||||  | |||| ||||||||||||    
T  6517779 aatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttc 6517714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 13089786 - 13089851
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||| | |||||||| | ||||||||||||| ||||  |||||| ||||||||||||    
T  13089786 aatgtgagtatgaaagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttc 13089851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 19521987 - 19522071
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcattt 97  Q
    |||||||||| ||||||| | ||||||| ||||| | |||||||| | ||||||||||| | ||||  |||||| |||||||||||    
T  19521987 agagagagaaagtaaaaagataatgtgagtatgaaagagaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcattt 19522071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 105
Target Start/End: Complemental strand, 33037607 - 33037515
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttcactaaaa 105  Q
    ||||||| || ||||||| | ||||||| ||||||| |||||||| | | ||||||||| | ||||  |||||| |||||||||||| ||||||    
T  33037607 agagagaaaaagtaaaaagataatgtgagtatgagagagaaagttgtcataaaagttgtaa-aaaatggttgttcaaatatcatttctctaaaa 33037515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 33599050 - 33598997
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaa 65  Q
    ||||||| || ||||||| | ||||||| |||||||||||||||||| ||||||    
T  33599050 agagagaaaaagtaaaaacataatgtgagtatgagaaagaaagttatcacaaaa 33598997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 37172738 - 37172791
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaa 65  Q
    ||||||||||  |||||| ||||||||| |||||||||||||||| | ||||||    
T  37172738 agagagagaaattaaaaacacaatgtgagtatgagaaagaaagttgtcacaaaa 37172791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 43441805 - 43441740
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||| |||||||| || |||||||||| ||||||  | |||| ||||||||||||    
T  43441805 aatgtgagtatgagagagaaagttgttgcaaaagttgttacaaaatggatgttcaaatatcatttc 43441740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 1079942 - 1080021
Alignment:
Q  18 agaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||| ||||||| | ||||||||||||||| |||||||| | |||||| |||| | |||| | ||||| ||||||||||||    
T  1079942 agaaagtaaaaagataatgtgaatatgagagagaaagttgtcacaaaaattgt-aaaaaataattgttcaaatatcatttc 1080021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 7077348 - 7077411
Alignment:
Q  34 atgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||| |||||||||||||||||| | ||||||||| ||||||  |||||  ||||||||||||    
T  7077348 atgtgagtatgagaaagaaagttatca-aaaagttgtaacaaaatggttgtacaaatatcatttc 7077411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 35172330 - 35172374
Alignment:
Q  26 aaaatacaatgtgaatatgagaaagaaagttattacaaaagttgt 70  Q
    |||||||||||||| |||||||||||||||| | | |||||||||    
T  35172330 aaaatacaatgtgagtatgagaaagaaagttgtcataaaagttgt 35172374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 7e-19; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 12 - 104
Target Start/End: Complemental strand, 41018751 - 41018659
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttcactaaa 104  Q
    |||||||||| ||||||||| ||||||| ||||||| |||||||| | ||||||||||||  |||| ||||||| |||||||||||| |||||    
T  41018751 agagagagaaagtaaaaatataatgtgagtatgagatagaaagttgtcacaaaagttgtccaaaaatagttgttcaaatatcatttctctaaa 41018659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 22195117 - 22195210
Alignment:
Q  16 agagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttcactaaaattaa 109  Q
    |||||| ||||||| | |||| || | ||||| |||||||||| ||||||||||||| ||| |||||||| |||||||||||| ||||||||||    
T  22195117 agagaaagtaaaaagagaatgcgagtttgagagagaaagttatcacaaaagttgtcaaaaatcagttgttcaaatatcatttctctaaaattaa 22195210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 47448914 - 47448828
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||| |||| ||||||| ||||||||| ||||||| |||||||| | ||||||||||||| ||||  |||||| ||||||||||||    
T  47448914 agagaaagaaagtaaaaacacaatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttc 47448828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 43573547 - 43573612
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||||||||||| |||||||| || ||||||||||||||||| || |||| ||||||||||||    
T  43573547 aatgtgaatatgagagagaaagttgttgcaaaagttgtcacaaaatagatgttcaaatatcatttc 43573612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 31445405 - 31445326
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaata 91  Q
    |||||||||| ||||||||| ||||||| ||||| |||||||||| | ||||||||||||| ||||  |||||| |||||    
T  31445405 agagagagaaagtaaaaatataatgtgagtatgaaaaagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaata 31445326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 13729813 - 13729728
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| || ||||||| | ||||||| |||||||||||||||| || |||||||||||||||||  | |||| ||||||||||||    
T  13729813 agagagataaagtaaaaa-ataatgtgagtatgagaaagaaagttgttgcaaaagttgtcacaaaatggatgttcaaatatcatttc 13729728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 40760758 - 40760836
Alignment:
Q  16 agagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcattt 97  Q
    |||||| ||||||||||||||| |||||||  ||||||||| || |||||||| |||||||| |||||| ||||||||||||    
T  40760758 agagaaagtaaaaatacaatgtaaatatga--aagaaagttgtt-caaaagttatcacaaaatagttgtataaatatcattt 40760836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 24 - 98
Target Start/End: Complemental strand, 41750191 - 41750117
Alignment:
Q  24 taaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||| ||||||| || ||||||| ||||||||||||||||||||||   ||||  |||||||||||||||||||    
T  41750191 taaaagtacaatgagagtatgagagagaaagttattacaaaagttgtttaaaaatggttgtttaaatatcatttc 41750117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 33057467 - 33057382
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcattt 97  Q
    |||||||||| |||  || ||||| ||| || ||||||||||||| ||||||||||||| | |||| ||||||| |||||||||||    
T  33057467 agagagagaaagtaggaagacaatatgagtaagagaaagaaagttgttacaaaagttgttaaaaaatagttgttcaaatatcattt 33057382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 103
Target Start/End: Complemental strand, 13152680 - 13152590
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttcactaa 103  Q
    |||||||||| ||||||  | ||||||| ||||||| |||||||| | ||||||||||||| ||||  |||||| |||||||||||| ||||    
T  13152680 agagagagaaagtaaaaggataatgtgagtatgagagagaaagttgtcacaaaagttgtca-aaaatggttgttcaaatatcatttctctaa 13152590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 30941473 - 30941388
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| ||||||| | ||||||| ||||||| |||||||| | ||||||||||| | ||||  |||||| ||||||||||||    
T  30941473 agagagagaaagtaaaaagataatgtgagtatgagagagaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatttc 30941388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 44895556 - 44895641
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| ||||||| | || |||||||||||| |||||||| | ||||||||||| | ||||  |||||| ||||||||||||    
T  44895556 agagagagaaagtaaaaagataacgtgaatatgagatagaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatttc 44895641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 12 - 105
Target Start/End: Original strand, 2008841 - 2008934
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttcactaaaa 105  Q
    |||||||||| ||| ||  ||||||||  ||||||| |||||||| | ||||||||||||| |||   |||||| |||||||||||| ||||||    
T  2008841 agagagagaaagtagaagaacaatgtgtgtatgagagagaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcatttctctaaaa 2008934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 11564980 - 11564896
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcattt 97  Q
    ||||||| || ||||||| | ||||||| ||||||| ||||||||||  ||||||||||||||||| |  |||| |||||||||||    
T  11564980 agagagataaagtaaaaa-ataatgtgagtatgagagagaaagttatagcaaaagttgtcacaaaataaatgttcaaatatcattt 11564896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 29002675 - 29002610
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| || |||| |||||||| || ||||||||||||| ||| || |||||||||||||||||    
T  29002675 aatgtgattacgagagagaaagttgttgcaaaagttgtcactaaatagatgtttaaatatcatttc 29002610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 42584890 - 42584793
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttcactaaaattaa 109  Q
    ||||||| || ||||||||| ||||||| ||||||| |||||||| | ||||||||||| | ||||  |||||  | |||||||||| ||||| ||||    
T  42584890 agagagataaagtaaaaatataatgtgagtatgagagagaaagttgtcacaaaagttgttagaaaatggttgtacatatatcatttctctaaagttaa 42584793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 44184563 - 44184628
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||| |||||||| | |||||||||||| ||||| || |||| ||||||||||||    
T  44184563 aatgtgagtatgagagagaaagttgtcacaaaagttgtcgcaaaatagatgttcaaatatcatttc 44184628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 12007191 - 12007255
Alignment:
Q  34 atgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||| ||||||| |||||||| | ||||||||||||| ||||  |||||| ||||||||||||    
T  12007191 atgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttc 12007255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 17002420 - 17002344
Alignment:
Q  16 agagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatat 92  Q
    |||||||||||||||| ||||||| ||||| | |||||||||| | ||||||||| | ||||  |||||| ||||||    
T  17002420 agagaaggtaaaaatataatgtgagtatgaaagagaaagttatcataaaagttgttaaaaaatggttgttcaaatat 17002344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 33578300 - 33578384
Alignment:
Q  14 agagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||| ||||||||| ||||| ||||||| |||||||||| | | ||||||||||| ||||  |||||| | || |||||||    
T  33578300 agagagaaagtaaaaatataatgtaaatatgaaaaagaaagttgtcataaaagttgtcaaaaaatggttgttcagatctcatttc 33578384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 35072350 - 35072433
Alignment:
Q  16 agagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttcac 100  Q
    |||||| ||||||||| ||||||| ||||| | |||||||| ||||| | ||||||| ||||  |||||| ||||||||||||||    
T  35072350 agagaaagtaaaaatagaatgtgactatgaaagagaaagttgttacata-gttgtcaaaaaatggttgttcaaatatcatttcac 35072433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 48145612 - 48145556
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagtt 68  Q
    |||||||||| ||||||||| ||||||| |||||| ||||||||||| | |||||||    
T  48145612 agagagagaaagtaaaaatataatgtgagtatgagcaagaaagttatcataaaagtt 48145556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 20337387 - 20337333
Alignment:
Q  23 gtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaa 77  Q
    ||||||||| ||||||||||||||| ||||| |||| | |||| |||||||||||    
T  20337387 gtaaaaatataatgtgaatatgagagagaaaattatcataaaaattgtcacaaaa 20337333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 98
Target Start/End: Complemental strand, 37352178 - 37352112
Alignment:
Q  32 caatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||||||||| | ||| |||| |||||| |||||| ||||  |||||| ||||||||||||    
T  37352178 caatgtgaatatgagagaaaaaattatcacaaaaattgtcaaaaaatggttgttcaaatatcatttc 37352112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 40854638 - 40854696
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgt 70  Q
    |||||||||| ||||||||| ||||||| ||||||| ||||| || | |||||||||||    
T  40854638 agagagagaaagtaaaaatataatgtgagtatgagagagaaaattgtcacaaaagttgt 40854696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 43159558 - 43159644
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| ||||||||| |||  || ||||||| |||||||| | |||||| |||| | ||||  |||||| ||||||||||||    
T  43159558 agagagagaaagtaaaaatataatacgagtatgagatagaaagttgtcacaaaaattgttaaaaaatggttgttcaaatatcatttc 43159644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 49069337 - 49069251
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||||||  |||||| | ||||| ||||||||| ||||| |||| ||||||||||||| |||   |||||  ||||||||||||    
T  49069337 agagagagaaaataaaaacataatgtaaatatgagagagaaaattatcacaaaagttgtcaaaaagtggttgtacaaatatcatttc 49069251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 98
Target Start/End: Complemental strand, 13162978 - 13162921
Alignment:
Q  41 tatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| |||||||| || ||||||||||||| ||| || |||| ||||||||||||    
T  13162978 tatgagagagaaagttgttgcaaaagttgtcactaaatagatgttcaaatatcatttc 13162921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 24532926 - 24533011
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcattt 97  Q
    |||||||||| ||||||| | ||||||| ||||||| | ||| || | |||||| || ||| |||| ||||||| |||||||||||    
T  24532926 agagagagaaagtaaaaacataatgtgagtatgagagaaaaaattgtcacaaaaattatcagaaaatagttgttcaaatatcattt 24533011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 32529842 - 32529922
Alignment:
Q  16 agagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcattt 97  Q
    |||||| ||||||| |  || ||||||||||| |||||||| ||||||||||| | | |||| ||||||| |||||||||||    
T  32529842 agagaaagtaaaaagatcatctgaatatgagagagaaagttgttacaaaagttat-aaaaaatagttgttcaaatatcattt 32529922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 32777691 - 32777776
Alignment:
Q  13 gagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||||| ||| ||  ||| ||||| ||||||| |||||||| | | ||||||||||| ||||  |||||| ||||||||||||    
T  32777691 gagagagaaagtagaaggacagtgtgagtatgagagagaaagttgtcataaaagttgtcaaaaaatggttgttcaaatatcatttc 32777776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 103
Target Start/End: Complemental strand, 37899389 - 37899320
Alignment:
Q  34 atgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttcactaa 103  Q
    |||||| ||||||| | |||||| | ||||||||||||||||||  | |||| |||||||||||| ||||    
T  37899389 atgtgagtatgagagataaagttgtcacaaaagttgtcacaaaatggatgttcaaatatcatttctctaa 37899320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 39332052 - 39331987
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||| ||| |||||||| |||||||||||||||| |||  | |||| ||||||||||||    
T  39332052 aatgtgagtataagagagaaagttgttacaaaagttgtcactaaatggatgttcaaatatcatttc 39331987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 40207805 - 40207869
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||||||||||||||||| ||| ||||||||||||   |||| ||||||  ||||||||||||    
T  40207805 aatgtgaatatgagaaagaaaatta-tacaaaagttgtacaaaaatagttgtacaaatatcatttc 40207869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 41189527 - 41189580
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaa 65  Q
    |||||||||| ||||||| | ||||||| |||||||||||||||| | ||||||    
T  41189527 agagagagaaagtaaaaagataatgtgagtatgagaaagaaagttgtcacaaaa 41189580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 46260079 - 46260168
Alignment:
Q  16 agagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttcactaaaa 105  Q
    |||||| ||||||||| ||| | ||||||||| | |||||| | |||||||||||   ||||  ||||| ||||||||||||| ||||||    
T  46260079 agagaaagtaaaaatataatataaatatgagagataaagttgtcacaaaagttgttttaaaatggttgtataaatatcatttctctaaaa 46260168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 116696 - 116633
Alignment:
Q  34 atgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||| ||||||| |||||||| | || ||||||| ||||||| |||||| |||||||||||||    
T  116696 atgtgagtatgagagagaaagttgt-accaaagttggcacaaaatagttgtataaatatcatttc 116633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 2300138 - 2300082
Alignment:
Q  41 tatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcattt 97  Q
    ||||||| |||||||| | |||||| |||||| |||| ||||||| |||||||||||    
T  2300138 tatgagatagaaagttgtaacaaaaattgtcataaaatagttgttcaaatatcattt 2300082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 4971375 - 4971292
Alignment:
Q  14 agagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||  |||| |||| ||||||| ||||||| |||||||| | | ||||||||||||||||  |||||  ||||||||||||    
T  4971375 agagagatagtaagaatataatgtgagtatgagagagaaagttgt-ataaaagttgtcacaaaatggttgtacaaatatcatttc 4971292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 26018128 - 26018072
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagtt 68  Q
    |||||||||| ||||||||| ||||||||||||||| | || ||| | |||||||||    
T  26018128 agagagagaaagtaaaaatataatgtgaatatgagagataatgttgtcacaaaagtt 26018072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 27568105 - 27568045
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtca 72  Q
    |||||||||| ||||||| | ||| ||| ||||||||| |||||| | |||||||||||||    
T  27568105 agagagagaaagtaaaaacataatatgagtatgagaaataaagttgtcacaaaagttgtca 27568045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 33050248 - 33050185
Alignment:
Q  34 atgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||| ||||||| |||||||| | ||||||||||||||||||  |||||  ||||||||||||    
T  33050248 atgtgagtatgagagagaaagttgt-acaaaagttgtcacaaaatggttgtacaaatatcatttc 33050185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 41458663 - 41458599
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcattt 97  Q
    ||||||| ||||||| ||||||||  ||||||| |||||| |||| || |||| |||||||||||    
T  41458663 aatgtgagtatgagagagaaagttgctacaaaaattgtcataaaatagatgttaaaatatcattt 41458599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 46578119 - 46578179
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtca 72  Q
    |||||||||| ||||||  | ||||||||||||||| | ||| || |||||||||||||||    
T  46578119 agagagagaaagtaaaatgataatgtgaatatgagagataaaattgttacaaaagttgtca 46578179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 62 - 98
Target Start/End: Complemental strand, 46725655 - 46725619
Alignment:
Q  62 aaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||||||||| |||||| |||||||||||||    
T  46725655 aaaagttgtcacaaaatagttgtataaatatcatttc 46725619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 7e-19; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 38821452 - 38821368
Alignment:
Q  14 agagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||||||||| ||||||||| ||||||||||||| || | ||||||||||||| ||||  |||||| ||||||||||||    
T  38821452 agagagaaggtaaaaacacaatgtgagtatgagaaagaaaattgtcacaaaagttgtcataaaatggttgttcaaatatcatttc 38821368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 28277752 - 28277836
Alignment:
Q  14 agagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||| ||||||| | ||||||| |||   |||||||||||| ||||||||||||| |||| |||||| |||||||||||||    
T  28277752 agagagaaagtaaaaacataatgtgagtatagaaaagaaagttatcacaaaagttgtcagaaaatagttgtataaatatcatttc 28277836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 98
Target Start/End: Complemental strand, 2841927 - 2841836
Alignment:
Q  6 agcagcagagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||| |||||||| || ||||||| | ||||||| |||||||||||||||| | ||||||||||||||||||  | || | ||||||||||||    
T  2841927 agcaacagagagataaagtaaaaa-ataatgtgagtatgagaaagaaagttgtaacaaaagttgtcacaaaatggatgatcaaatatcatttc 2841836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 21611644 - 21611728
Alignment:
Q  14 agagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||| ||||||| | ||| |||||||||||||||||||||| || |||||||| | ||||  ||| || ||||||||||||    
T  21611644 agagagaaagtaaaaagataatatgaatatgagaaagaaagttatcactaaagttgtaaaaaaatggttcttaaaatatcatttc 21611728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 103
Target Start/End: Original strand, 44977483 - 44977575
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaa-acagttgtttaaatatcatttcactaa 103  Q
    |||||||||| ||||||| | ||||| ||||||||| ||||| || ||||||||||||||| ||| |  ||||| ||||||||||||| ||||    
T  44977483 agagagagaaagtaaaaacataatgtaaatatgagagagaaaattgttacaaaagttgtcaaaaagatggttgtataaatatcatttctctaa 44977575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 3838864 - 3838949
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| ||||||| | ||||||||||| ||||| ||| |||| ||||||||||| | |||| | ||||| ||||||||||||    
T  3838864 agagagagaaagtaaaaagataatgtgaatataagaaaaaaaattatcacaaaagttgt-aaaaaataattgttcaaatatcatttc 3838949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 8427640 - 8427554
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| |||||| || ||||| | ||||||| |||||||| | |||||| |||||| |||| || |||| ||||||||||||    
T  8427640 agagagagaaagtaaaagtataatgtaagtatgagagagaaagttgtcacaaaaattgtcaaaaaatagatgttcaaatatcatttc 8427554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 18254193 - 18254278
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| ||||||| | ||||||| ||||||| |||||||| | ||||||||||| | ||||  |||||| ||||||||||||    
T  18254193 agagagagaaagtaaaaagataatgtgagtatgagagagaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatttc 18254278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 18510763 - 18510677
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| ||| ||  ||||||||| || ||||  ||||||| || |||||||||||| |||| ||||||| ||||||||||||    
T  18510763 agagagagaaagtagaaggacaatgtgagtaagagagggaaagttgttgcaaaagttgtcaaaaaatagttgttcaaatatcatttc 18510677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 26206934 - 26206849
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| || ||||||| | ||||||| ||||||| |||||||||| |||||| |||||| |||| || |||| ||||||||||||    
T  26206934 agagagataaagtaaaaa-ataatgtgagtatgagagagaaagttataacaaaaattgtcataaaatagatgttcaaatatcatttc 26206849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 28245815 - 28245730
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| || ||||||| | ||||||| ||||||| |||||||| | |||||||||||| ||||| || |||| ||||||||||||    
T  28245815 agagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgtcacaaaagttgtcgcaaaatagatgttcaaatatcatttc 28245730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 33616553 - 33616495
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgt 70  Q
    |||||||||| ||||||||| ||| ||||||||||| |||||||||| |||||| ||||    
T  33616553 agagagagaaagtaaaaatataatatgaatatgagagagaaagttatcacaaaatttgt 33616495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 36774626 - 36774568
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgt 70  Q
    |||||||||| ||||||||| ||||||||||||||| |||||||| |  ||||||||||    
T  36774626 agagagagaaagtaaaaatataatgtgaatatgagagagaaagttgtctcaaaagttgt 36774568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 98
Target Start/End: Complemental strand, 39147849 - 39147767
Alignment:
Q  16 agagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||| ||||||| | ||||||||||||| | |||||||| ||||||||||||| | |||| ||||||  || |||||||||    
T  39147849 agagaaagtaaaaacataatgtgaatatgaaagagaaagttgttacaaaagttgtaaaaaaatagttgtacaagtatcatttc 39147767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 2221060 - 2220995
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||| |||||||||| |||||| ||||||||||| || |||| |||||| |||||    
T  2221060 aatgtgagtatgagagagaaagttatcacaaaaattgtcacaaaatagatgttcaaatattatttc 2220995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 10094718 - 10094780
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaa 76  Q
    ||||||||||  |||||||||||| | |||||||||||||||||||| | |||||||| ||||||    
T  10094718 agagagagaa--taaaaatacaatataaatatgagaaagaaagttatcataaaagttggcacaaa 10094780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 18177007 - 18176942
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||| |||||||| || ||||||||||||| ||| || |||| ||||||||||||    
T  18177007 aatgtgagtatgagagagaaagttgttgcaaaagttgtcactaaatagatgttcaaatatcatttc 18176942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 9194516 - 9194432
Alignment:
Q  13 gagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcattt 97  Q
    |||||||||  | |||||| ||||||| ||||||| |||||||| | | ||||||||||||||||  | |||| |||||||||||    
T  9194516 gagagagaaaatgaaaatataatgtgagtatgagagagaaagttgtcataaaagttgtcacaaaatggatgttcaaatatcattt 9194432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 14328475 - 14328411
Alignment:
Q  6 agcagcagagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgt 70  Q
    |||| ||||||||||| ||||||||| ||||||| ||||||| | |||||| | |||||||||||    
T  14328475 agcaacagagagagaaagtaaaaatataatgtgagtatgagagaaaaagttgtcacaaaagttgt 14328411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 18737863 - 18737915
Alignment:
Q  18 agaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgt 70  Q
    |||| ||||||||| ||||||||||||||| |||||||| | |||||||||||    
T  18737863 agaaagtaaaaatataatgtgaatatgagagagaaagttgtcacaaaagttgt 18737915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 98
Target Start/End: Complemental strand, 25881637 - 25881546
Alignment:
Q  6 agcagcagagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||| |||||||| || ||||||| | ||||||| ||||||| |||||||| | |||||| ||||| ||||| || |||| ||||||||||||    
T  25881637 agcaacagagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgtcacaaaaattgtcgcaaaatagatgttcaaatatcatttc 25881546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 42532722 - 42532778
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagtt 68  Q
    ||||||| || ||||||||| ||||||| |||||||||||||||| | |||||||||    
T  42532722 agagagataaagtaaaaatataatgtgagtatgagaaagaaagttgtcacaaaagtt 42532778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 14877022 - 14876959
Alignment:
Q  35 tgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||| ||||||| |||||||| | ||||||||||||| |||| ||||||| | ||||||||||    
T  14877022 tgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatagttgttcacatatcatttc 14876959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 42530228 - 42530303
Alignment:
Q  23 gtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| | ||||||||||||| ||||||| |||| |||||||| |||| ||||  |||||  ||||||||||||    
T  42530228 gtaaaaacataatgtgaatatgaaaaagaaaattatcacaaaagtcgtcaaaaaatggttgtaaaaatatcatttc 42530303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 98
Target Start/End: Original strand, 1040405 - 1040479
Alignment:
Q  24 taaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||| ||||| |||||||||||  |||| || ||| ||||||||||| |||| |||||||  |||||||||||    
T  1040405 taaaaacacaatatgaatatgagagggaaaattgttataaaagttgtcataaaatagttgttcgaatatcatttc 1040479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 9207677 - 9207619
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgt 70  Q
    |||||||||| ||||||| | ||||||| ||||||| |||||||| | |||||||||||    
T  9207677 agagagagaaagtaaaaaaataatgtgagtatgagagagaaagttgtcacaaaagttgt 9207619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 9990778 - 9990693
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| ||||||| | ||||||| ||| ||| |||||||| | ||||||||||| | |||  ||||||| ||||||||||||    
T  9990778 agagagagaaagtaaaaagataatgtgagtataagagagaaagttgtcacaaaagttgt-aaaaattagttgttcaaatatcatttc 9990693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 97
Target Start/End: Complemental strand, 27939234 - 27939160
Alignment:
Q  23 gtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcattt 97  Q
    ||||||||| ||| ||| ||||||| | || ||||| | |||| ||||||||||| |||||| ||||||||||||    
T  27939234 gtaaaaatataatatgagtatgagagataatgttatcataaaaattgtcacaaaatagttgtataaatatcattt 27939160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 100
Target Start/End: Complemental strand, 35705568 - 35705494
Alignment:
Q  26 aaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttcac 100  Q
    |||||| ||||||| ||||||| ||||| |||| | |||||||||||| ||| || |||| |||||| |||||||    
T  35705568 aaaatataatgtgagtatgagagagaaaattatcataaaagttgtcaccaaatagatgttcaaatataatttcac 35705494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 36802983 - 36802898
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| || ||||||| | ||||||| ||||||| |||||||| |  |||||||||||||||||  | |||| ||||||||||||    
T  36802983 agagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgtagcaaaagttgtcacaaaatggatgttcaaatatcatttc 36802898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 41042341 - 41042256
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| ||||||| | ||||||| ||||||| | |||||| | ||||||||||| | ||||  |||||| ||||||||||||    
T  41042341 agagagagaaagtaaaaagataatgtgagtatgagagaaaaagttgtcacaaaagttgtta-aaaatggttgttcaaatatcatttc 41042256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 6999072 - 6999137
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||| |||||||| | ||||||||||||| ||||  | |||| ||||||||||||    
T  6999072 aatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttc 6999137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 7664050 - 7664138
Alignment:
Q  12 agagagagaaggtaaaaatacaa--tgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| ||||||||| ||  ||| | ||||||| |||||||||| |||||| |||||  |||| | ||||| ||||||||||||    
T  7664050 agagagagaaagtaaaaatataaaatgtaagtatgagatagaaagttatcacaaaaattgtccaaaaataattgttcaaatatcatttc 7664138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 13347819 - 13347884
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||| |||||||| || ||||| |||||||||||  | |||| ||||||||||||    
T  13347819 aatgtgagtatgagagagaaagttgttgcaaaaattgtcacaaaatggatgttcaaatatcatttc 13347884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 18723661 - 18723596
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||| |||||||| | |||||| |||||||||||  | |||| ||||||||||||    
T  18723661 aatgtgagtatgagagagaaagttgtaacaaaaattgtcacaaaatggatgttcaaatatcatttc 18723596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 26481073 - 26481158
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcattt 97  Q
    ||||| |||| ||| ||| |||| |||| ||||||||||||| || | ||||||||||| | |||| | ||||| |||||||||||    
T  26481073 agagaaagaaagtagaaaaacaacgtgagtatgagaaagaaaattgtcacaaaagttgttaaaaaataattgttcaaatatcattt 26481158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 35589391 - 35589456
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||| ||||| || || |||||||||||||||||  | |||| ||||||||||||    
T  35589391 aatgtgagtatgagagagaaaattgttgcaaaagttgtcacaaaatggatgttcaaatatcatttc 35589456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 6336338 - 6336254
Alignment:
Q  14 agagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||||  |||||||| ||| ||| ||||||| |||||||| | ||||||||||| | ||||  |||||  ||||||||||||    
T  6336338 agagagaaaataaaaatataatatgagtatgagagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcatttc 6336254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 8482220 - 8482260
Alignment:
Q  16 agagaaggtaaaaatacaatgtgaatatgagaaagaaagtt 56  Q
    ||||| |||||||||| ||||||||||||||| ||||||||    
T  8482220 agagagggtaaaaatataatgtgaatatgagagagaaagtt 8482260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 33 - 65
Target Start/End: Original strand, 14891094 - 14891126
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaa 65  Q
    |||||||||||||||||||||||||| ||||||    
T  14891094 aatgtgaatatgagaaagaaagttatcacaaaa 14891126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 39449122 - 39449186
Alignment:
Q  34 atgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||| ||||| | |||||||| | ||||||||||||||||||  | |||| ||||||||||||    
T  39449122 atgtgagtatgaaagagaaagttgtaacaaaagttgtcacaaaatggatgttcaaatatcatttc 39449186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 3e-18; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 37060403 - 37060320
Alignment:
Q  14 agagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcattt 97  Q
    |||||||||||||||||| ||||||||||||||| |||||||| | ||||||||||||| ||||  |||||| ||||| |||||    
T  37060403 agagagaaggtaaaaatataatgtgaatatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaataacattt 37060320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 6 - 98
Target Start/End: Original strand, 50721722 - 50721814
Alignment:
Q  6 agcagcagagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||| |||||||||| ||||||||| ||||||| ||||| | |||||||||| ||||||||||||| |||   |||||| ||||||||||||    
T  50721722 agcagtagagagagaaagtaaaaatataatgtgagtatgaaagagaaagttatcacaaaagttgtcaaaaattggttgttcaaatatcatttc 50721814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 56557819 - 56557735
Alignment:
Q  14 agagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||||||||| ||||||||| ||||||| ||||| || | ||||||||||||| ||||  |||||| ||||||||||||    
T  56557819 agagagaaggtaaaaacacaatgtgagtatgagagagaaaattgtcacaaaagttgtcataaaattgttgttcaaatatcatttc 56557735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 20118869 - 20118783
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||| |||| ||||||||| ||||||||||| ||| ||||||||||| |||||||||| | ||||  |||||| ||||||||||||    
T  20118869 agagatagaaagtaaaaatataatgtgaatataagagagaaagttattgcaaaagttgttataaaatggttgttcaaatatcatttc 20118783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 336791 - 336876
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| | ||||||||||||||||||||||| |||||||| | |||||| |||||| |||| | ||||  ||||||||||||    
T  336791 agagagagaaagcaaaaatacaatgtgaatatgagagagaaagttgtcacaaaaattgtca-aaaataattgtacaaatatcatttc 336876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 2738251 - 2738337
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| ||| ||| | ||||||||||||||| |||||||||| |||||| |||||| ||||   ||||| ||||||||||||    
T  2738251 agagagagaaagtagaaagataatgtgaatatgagagagaaagttatcacaaaaattgtcaaaaaatgattgttcaaatatcatttc 2738337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 10250499 - 10250584
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| ||||||| | ||||||| ||||||| |||||||| | ||||||||||| | |||| ||||||| ||||||||||||    
T  10250499 agagagagaaagtaaaaagataatgtgagtatgagagagaaagttgtcacaaaagttgt-aaaaaatagttgttcaaatatcatttc 10250584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 43175071 - 43174986
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| ||||||| | ||||||| ||||||| |||||||||| ||||||||||| | ||||  |||||| ||||||||||||    
T  43175071 agagagagaaagtaaaaaaataatgtgagtatgagagagaaagttatcacaaaagttgt-aaaaaatggttgttcaaatatcatttc 43174986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 50890057 - 50890142
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| | ||||||| ||||||| ||||||| |||||||| | ||||||||||||| |||| ||||||  ||||||||||||    
T  50890057 agagagagaaagcaaaaatataatgtgagtatgagagagaaagttgtcacaaaagttgtca-aaaatagttgtacaaatatcatttc 50890142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 27051072 - 27051155
Alignment:
Q  14 agagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||||||||| | ||||||| ||||||| |||||||||| |||||| || | | ||||  |||||||||||||||||||    
T  27051072 agagagaaggtaaaaagataatgtgagtatgagagagaaagttatcacaaaaattat-aaaaaatggttgtttaaatatcatttc 27051155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 98
Target Start/End: Complemental strand, 32696255 - 32696183
Alignment:
Q  26 aaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||| ||||||||||||||||| |||||||||| |||| |||||||| ||||  | |||| ||||||||||||    
T  32696255 aaaaaacaatgtgaatatgagagagaaagttatcacaatagttgtcaaaaaattgatgttcaaatatcatttc 32696183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 55266111 - 55266027
Alignment:
Q  14 agagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||| ||||||  ||||||||||||||||| ||||| |||| | |||||||| || ||||  ||||||||||||| |||||    
T  55266111 agagagaaagtaaaaggacaatgtgaatatgagagagaaaattataataaaagttgacaaaaaatggttgtttaaatataatttc 55266027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 33 - 104
Target Start/End: Original strand, 624316 - 624387
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttcactaaa 104  Q
    ||||||| ||||||| |||||||| || ||||||||||||| ||| || |||| |||||||||||| |||||    
T  624316 aatgtgagtatgagagagaaagttgttgcaaaagttgtcactaaatagatgttcaaatatcatttctctaaa 624387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 11546884 - 11546971
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattac-aaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| ||||||||| ||| ||||||||||| |||||||||| || ||||||||| | ||||  |||||  ||||||||||||    
T  11546884 agagagagaaagtaaaaatataatatgaatatgagagagaaagttatcacaaaaagttgttagaaaatggttgtaaaaatatcatttc 11546971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 1795965 - 1796051
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| || ||||||||| ||||||| ||||||| | |||||||| ||||||||||| | ||||  |||||  ||||||||||||    
T  1795965 agagagataaagtaaaaatataatgtgagtatgagagataaagttatcacaaaagttgttaaaaaattgttgtacaaatatcatttc 1796051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 7632445 - 7632531
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| ||||||||| ||||||| ||||| | ||||| |||| ||||||||||||| |||    ||||| ||||||||||||    
T  7632445 agagagagaaagtaaaaatataatgtgagtatgaaagagaaaattatcacaaaagttgtcaaaaattgattgttcaaatatcatttc 7632531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 8455948 - 8455863
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||  ||||||||| ||||||| ||| ||| |||||||| || ||||||||||||||||| ||||||  ||||| ||||||    
T  8455948 agagagagagagtaaaaatataatgtgagtattagagagaaagttgtt-caaaagttgtcacaaaatagttgtacaaataacatttc 8455863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 5932161 - 5932226
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||| |||||||| || ||||||||||||| |||  | |||||||||||||||||    
T  5932161 aatgtgagtatgagagagaaagttgttgcaaaagttgtcactaaatggatgtttaaatatcatttc 5932226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 22819716 - 22819651
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||| |||||||| || |||||||||||||||||  | |||| ||||||||||||    
T  22819716 aatgtgagtatgagagagaaagttgttgcaaaagttgtcacaaaatggatgttcaaatatcatttc 22819651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 31574923 - 31574988
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaa 77  Q
    ||||||||||  |||||||| ||||||| ||||||| ||||| |||| ||||||||||||| ||||    
T  31574923 agagagagaaaataaaaatataatgtgagtatgagagagaaaattatcacaaaagttgtcagaaaa 31574988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 12694433 - 12694496
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcattt 97  Q
    ||||||||||||||| |||||||||| | ||||||||||||||||  |||||  |||||||||||    
T  12694433 aatgtgaatatgagagagaaagttatca-aaaagttgtcacaaaatggttgtacaaatatcattt 12694496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 13086089 - 13086045
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaa 77  Q
    ||||||| ||||||| |||||||| ||||||||||||||||||||    
T  13086089 aatgtgagtatgagagagaaagttgttacaaaagttgtcacaaaa 13086045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 25123255 - 25123334
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatat 92  Q
    |||||||||| ||||||| | ||||||| ||||||| |||| ||| ||| ||||||||||| |||| ||||||| ||||||    
T  25123255 agagagagaaagtaaaaagataatgtgactatgagagagaacgttgttataaaagttgtca-aaaatagttgttcaaatat 25123334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 42815470 - 42815406
Alignment:
Q  34 atgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||| ||||||| |||||||| | ||||||||||| |||||| ||||||  ||||||||||||    
T  42815470 atgtgagtatgagagagaaagttgtcacaaaagttgttacaaaatagttgtacaaatatcatttc 42815406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 51255812 - 51255748
Alignment:
Q  34 atgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||| ||||||| |||||||| | ||||||||||||| ||||  |||||| ||||||||||||    
T  51255812 atgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttc 51255748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 73
Target Start/End: Original strand, 6520817 - 6520876
Alignment:
Q  14 agagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcac 73  Q
    |||||||| ||||||| | ||||||| ||||||| |||||||| ||||||||||| ||||    
T  6520817 agagagaaagtaaaaacataatgtgagtatgagagagaaagttgttacaaaagttatcac 6520876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 99
Target Start/End: Original strand, 24575835 - 24575921
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttca 99  Q
    |||||||||| ||||||| ||||||| | ||||||| ||||| |||| | ||||||||||| | ||  |||||| |||||||||||||    
T  24575835 agagagagaaagtaaaaagacaatgtaagtatgagagagaaatttatcataaaagttgtca-ataatggttgttcaaatatcatttca 24575921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 32224008 - 32223961
Alignment:
Q  23 gtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgt 70  Q
    ||||||||| ||||| | |||||||||||||||||| |||||||||||    
T  32224008 gtaaaaatataatgtaagtatgagaaagaaagttatcacaaaagttgt 32223961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 98
Target Start/End: Original strand, 41262347 - 41262414
Alignment:
Q  31 acaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||||| || |||| ||||| || || ||||| |||||| |||| ||||||||||||||||||||    
T  41262347 acaatgtgagtaagagagagaaaattgttgcaaaaattgtcaaaaaatagttgtttaaatatcatttc 41262414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 2401698 - 2401612
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||||||  | ||||||  |||||| ||||||| | |||||| | ||||||||||||||||||  | |||| ||||||||||||    
T  2401698 agagagagaaaatgaaaatatgatgtgagtatgagagataaagttgtcacaaaagttgtcacaaaatggatgttcaaatatcatttc 2401612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 5249956 - 5249870
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| ||||||| | ||||||| ||||||| |||||||| | ||||| ||||||| ||||  ||||   ||||||||||||    
T  5249956 agagagagaaagtaaaaacataatgtgagtatgagagagaaagttgtcacaaatgttgtcataaaatggttgcacaaatatcatttc 5249870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 94
Target Start/End: Original strand, 17367342 - 17367424
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatca 94  Q
    ||||||||||  | |||| | ||||| ||||||||||||||| |||| | |||||||| ||||||| | ||||| ||||||||    
T  17367342 agagagagaaaatgaaaacataatgtaaatatgagaaagaaaattatcataaaagttgacacaaaataattgttcaaatatca 17367424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 21617270 - 21617185
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| || ||||||| | ||||||| ||||||| |||||||| | |||||| |||||||||||  | |||| ||||||||||||    
T  21617270 agagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgtaacaaaaattgtcacaaaatggatgttcaaatatcatttc 21617185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 30079933 - 30079848
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| || ||||||| | ||||||| ||||||| |||||||| || ||||||||||||| |||  | |||| ||||||||||||    
T  30079933 agagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgttgcaaaagttgtcactaaatggatgttcaaatatcatttc 30079848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 30170004 - 30170089
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| || ||||||| | ||||||| ||||||| |||||||| | ||||||||||||| |||| || |||| |||||| |||||    
T  30170004 agagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatagatgttcaaatataatttc 30170089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 37297136 - 37297051
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| ||||||| | ||||||| ||||||| ||||| || | ||||||||||| | ||||  |||||| ||||||||||||    
T  37297136 agagagagaaagtaaaaagataatgtgagtatgagagagaaaattgtcacaaaagttgt-aaaaaatggttgttcaaatatcatttc 37297051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 52204938 - 52204852
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| ||| ||| ||||||||| ||||| | ||||| |||| |||||| |||| | |||| | ||||| ||||||||||||    
T  52204938 agagagagaaagtagaaaaacaatgtgagtatgaaagagaaaattataacaaaaattgttaaaaaataattgttcaaatatcatttc 52204852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 54000786 - 54000700
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| ||||||  | ||||||| ||||||| |||||||| ||| |||| |||||| |||   |||||| ||||||||||||    
T  54000786 agagagagaaagtaaaatgataatgtgagtatgagagagaaagttgttataaaaattgtcaaaaagtggttgttcaaatatcatttc 54000700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 107
Target Start/End: Complemental strand, 4914944 - 4914899
Alignment:
Q  62 aaaagttgtcacaaaacagttgtttaaatatcatttcactaaaatt 107  Q
    |||| ||||||||||| ||||||| |||||||||||| ||||||||    
T  4914944 aaaaattgtcacaaaatagttgttcaaatatcatttctctaaaatt 4914899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 5932768 - 5932833
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||| |||||||| | ||||||||||||| |||   |||||| ||||||||||||    
T  5932768 aatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcatttc 5932833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 9362663 - 9362753
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttcactaaa 104  Q
    ||||||| || |||||||||  || ||||||||||| |||||||| | |||||||||||||  |||  | |||| |||||||||||| |||||    
T  9362663 agagagataaagtaaaaata--atatgaatatgagatagaaagttgtcacaaaagttgtcattaaatggatgttcaaatatcatttctctaaa 9362753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 105
Target Start/End: Original strand, 32696773 - 32696865
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttcactaaaa 105  Q
    ||||||| || ||||||||| | ||||| ||||||| ||||| |||| ||||||||||| | ||||  |||||  |||||||||||| ||||||    
T  32696773 agagagataaagtaaaaatata-tgtgagtatgagagagaaaattatcacaaaagttgttagaaaatggttgtacaaatatcatttctctaaaa 32696865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 39344984 - 39345049
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||| |||||||| || ||||| |||||||||||  | |||| ||||||||||||    
T  39344984 aatgtgagtatgagagagaaagttgttgcaaaaattgtcacaaaatggatgttcaaatatcatttc 39345049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 42916726 - 42916653
Alignment:
Q  24 taaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcattt 97  Q
    |||||||  ||||||| ||||||||||||||||   ||||||||||| | ||||  |||||| |||||||||||    
T  42916726 taaaaatgtaatgtgagtatgagaaagaaagttgacacaaaagttgttataaaatggttgttcaaatatcattt 42916653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 51683029 - 51682956
Alignment:
Q  25 aaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||| ||||| | ||||||||| || ||||| | ||||||||||||| | ||| |||||||||||| ||||||    
T  51683029 aaaaacacaatataaatatgagagaggaagttgtcacaaaagttgtcaaacaacggttgtttaaataccatttc 51682956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 96
Target Start/End: Original strand, 51691574 - 51691619
Alignment:
Q  51 aaagttattacaaaagttgtcacaaaacagttgtttaaatatcatt 96  Q
    |||||| ||| |||||||||||  ||||||||||||||||||||||    
T  51691574 aaagttgttataaaagttgtcatcaaacagttgtttaaatatcatt 51691619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 62 - 106
Target Start/End: Original strand, 1298801 - 1298845
Alignment:
Q  62 aaaagttgtcacaaaacagttgtttaaatatcatttcactaaaat 106  Q
    ||||||||| |||||| ||||||||||||| |||||| |||||||    
T  1298801 aaaagttgtgacaaaatagttgtttaaataccatttctctaaaat 1298845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 3475934 - 3475871
Alignment:
Q  34 atgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||||||| |||||||| | ||||||||||||| ||||  |||||  ||||||||||||    
T  3475934 atgtgaatatgagagagaaagttgt-acaaaagttgtcataaaatggttgtacaaatatcatttc 3475871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 56
Target Start/End: Original strand, 18518447 - 18518479
Alignment:
Q  24 taaaaatacaatgtgaatatgagaaagaaagtt 56  Q
    |||||||||||||||||||||||| ||||||||    
T  18518447 taaaaatacaatgtgaatatgagagagaaagtt 18518479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 62 - 98
Target Start/End: Complemental strand, 33278713 - 33278677
Alignment:
Q  62 aaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  33278713 aaaagttgtcacaaaatagttgttcaaatatcatttc 33278677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 38864741 - 38864805
Alignment:
Q  34 atgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||| ||||||| |||||||| | | |||||||||||||||| | ||||  ||||||||||||    
T  38864741 atgtgagtatgagagagaaagttgtcaaaaaagttgtcacaaaataattgtacaaatatcatttc 38864805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 53662434 - 53662497
Alignment:
Q  34 atgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||||||| |||||||| | |||||| |||| |||||| ||||||  ||||||||||||    
T  53662434 atgtgaatatgagagagaaagttgt-acaaaaattgttacaaaatagttgtacaaatatcatttc 53662497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 4e-17; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 2730945 - 2731030
Alignment:
Q  13 gagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||||| ||||||| | ||||||||||||||| |||||||| ||||||||||||||| |||   |||||| ||||||||||||    
T  2730945 gagagagaaagtaaaaagataatgtgaatatgagagagaaagttgttacaaaagttgtcaaaaagtggttgttcaaatatcatttc 2731030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 105
Target Start/End: Original strand, 5849551 - 5849642
Alignment:
Q  14 agagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttcactaaaa 105  Q
    |||||||| ||||||||| ||| ||||||||||| | |||| ||| ||||||||| ||| ||||  |||||| |||||||||||| ||||||    
T  5849551 agagagaaagtaaaaatataatatgaatatgagatataaagctatcacaaaagttatcaaaaaatggttgttcaaatatcatttctctaaaa 5849642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 8671539 - 8671625
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| || ||||||||| |||| || ||||||| |||||||||||||||||||| | | ||||  | |||||||||||||||||    
T  8671539 agagagataaagtaaaaatataatgcgagtatgagagagaaagttattacaaaagttattataaaatggatgtttaaatatcatttc 8671625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 12656010 - 12655924
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| ||||||||| ||| ||||||||||| | |||||||||||||||||| | | ||||  |||||  ||||||||||||    
T  12656010 agagagagaaagtaaaaatataatatgaatatgagagaaaaagttattacaaaagttattataaaatggttgtacaaatatcatttc 12655924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 25830229 - 25830315
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| ||||||||| ||||||| ||||||| |||||||| | ||||||||||| | ||||  |||||  ||||||||||||    
T  25830229 agagagagaaagtaaaaatataatgtgagtatgagagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcatttc 25830315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 26026963 - 26026898
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| |||||||||||||||| | ||||||||||||| ||||  |||||| ||||||||||||    
T  26026963 aatgtgagtatgagaaagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttc 26026898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 6440167 - 6440083
Alignment:
Q  14 agagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||| ||||||||| ||||||| ||||||| |||||||| | ||||||||||| |  ||| ||||||  ||||||||||||    
T  6440167 agagagaaagtaaaaatataatgtgagtatgagagagaaagttgtcacaaaagttgtaaagaaatagttgtacaaatatcatttc 6440083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 14707338 - 14707413
Alignment:
Q  23 gtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| | ||||| |||||||||||||||||||| ||||||||||||| ||||    |||| ||||||||||||    
T  14707338 gtaaaaaaataatgtaaatatgagaaagaaagttatcacaaaagttgtcaaaaaatgaatgttcaaatatcatttc 14707413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 34718202 - 34718117
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| || ||||||| | ||||||| ||||||| |||||||| | ||||||||||||||||||  | |||| ||||||||||||    
T  34718202 agagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgtaacaaaagttgtcacaaaatggatgttcaaatatcatttc 34718117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 35067248 - 35067190
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgt 70  Q
    |||||||||| ||||||||| ||||||| ||||||| |||||||| | |||||||||||    
T  35067248 agagagagaaagtaaaaatataatgtgagtatgagagagaaagttgtcacaaaagttgt 35067190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 34 - 103
Target Start/End: Complemental strand, 3946306 - 3946237
Alignment:
Q  34 atgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttcactaa 103  Q
    |||||| ||||||| |||||||| | ||||||||||||||||||  | |||| |||||||||||| ||||    
T  3946306 atgtgagtatgagagagaaagttgtcacaaaagttgtcacaaaatggatgttcaaatatcatttctctaa 3946237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 7598791 - 7598710
Alignment:
Q  17 gagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||| ||||||| | ||||||| ||||||| |||||||  | ||||||||||||| ||||  |||||| ||||||||||||    
T  7598791 gagaaagtaaaaacataatgtgagtatgagagagaaagtggtcacaaaagttgtcaaaaaatggttgttcaaatatcatttc 7598710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 98
Target Start/End: Original strand, 40081921 - 40081996
Alignment:
Q  26 aaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttg---tttaaatatcatttc 98  Q
    |||||||||||||||| ||||||||||| |||| | |||| || |||||||| |||||   |||||||||||||||    
T  40081921 aaaatacaatgtgaatttgagaaagaaaattatcataaaaattatcacaaaatagttgttctttaaatatcatttc 40081996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 33100454 - 33100538
Alignment:
Q  14 agagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||||  |||||||  ||||||| ||||||| |||||||| | ||||||||||| | ||||  |||||| ||||||||||||    
T  33100454 agagagaaaataaaaatgtaatgtgagtatgagagagaaagttgtcacaaaagttgttataaaatggttgttcaaatatcatttc 33100538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 33605063 - 33605147
Alignment:
Q  14 agagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||  ||||||| ||||||||| ||||||| ||||| || || |||||||| ||| ||||  |||||| ||||||||||||    
T  33605063 agagagagagtaaaaacacaatgtgagtatgagagagaaaattgttccaaaagttatcataaaatggttgttcaaatatcatttc 33605147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 43285948 - 43286032
Alignment:
Q  14 agagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||| ||||||||| ||||||| ||||||| |||||||| | ||||||||| | | ||||  |||||  ||||||||||||    
T  43285948 agagagaaagtaaaaatataatgtgagtatgagagagaaagttgtcacaaaagttattagaaaatggttgtccaaatatcatttc 43286032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 98
Target Start/End: Complemental strand, 44061811 - 44061719
Alignment:
Q  6 agcagcagagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||| |||| |||||| ||||||  | ||||||| ||||||| |||||||| | ||||||||| ||| ||||  |||||| ||||||||||||    
T  44061811 agcaacagaaagagaaagtaaaatgataatgtgagtatgagagagaaagttgtcacaaaagttatcaaaaaatggttgttcaaatatcatttc 44061719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 40528813 - 40528750
Alignment:
Q  35 tgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||| ||||| | |||||||| | | |||||||||||||||| ||||||| ||||||||||||    
T  40528813 tgtgagtatgaaagagaaagttgtcataaaagttgtcacaaaatagttgttcaaatatcatttc 40528750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 1068694 - 1068608
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| ||| ||  ||||||||  ||||||| |||||||| | ||||||||||||| |||   |||||| ||||||||||||    
T  1068694 agagagagaaagtagaagaacaatgtgtgtatgagagagaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcatttc 1068608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 1633874 - 1633959
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| || ||||||| | ||||||| ||||||| |||||||| || ||||||||||||| |||  | |||| ||||||||||||    
T  1633874 agagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgttgcaaaagttgtcactaaatggatgttcaaatatcatttc 1633959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 2621873 - 2621787
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||| ||||| ||||||||| ||||| | ||| ||| | |||||| | ||||||||| |||||||  |||||| |||||||||||||    
T  2621873 agagtgagaaagtaaaaatataatgtaagtataagagataaagttgtcacaaaagttatcacaaattagttgtataaatatcatttc 2621787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 44 - 98
Target Start/End: Original strand, 5771891 - 5771945
Alignment:
Q  44 gagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||| ||| |||| ||||||||||||||||||||  |||||| ||||||||||||    
T  5771891 gagagagagagttgttacaaaagttgtcacaaaatggttgttcaaatatcatttc 5771945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 6991792 - 6991877
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| || ||||||| | ||||||| ||||||| ||||| |||| |||||| ||||||| ||| || |||| ||||||||||||    
T  6991792 agagagataaagtaaaaa-ataatgtgagtatgagagagaaaattatcacaaaaattgtcaccaaatagatgttcaaatatcatttc 6991877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 27325845 - 27325760
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| ||||||| |  |||||| ||||||| |||||||| | ||||||||||| | ||||  |||||| ||||||||||||    
T  27325845 agagagagaaagtaaaaagatcatgtgagtatgagagagaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatttc 27325760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 98
Target Start/End: Complemental strand, 43397864 - 43397783
Alignment:
Q  16 agagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||| ||||||| | ||||||| ||||||| |||||||| | ||||||||||| | ||||  |||||| ||||||||||||    
T  43397864 agagaaagtaaaaaaataatgtgagtatgagagagaaagttgtaacaaaagttgt-aaaaaatggttgttcaaatatcatttc 43397783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 9549183 - 9549267
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcattt 97  Q
    ||||||| || ||||||| | ||||||| ||||||| ||||| || | ||||||||||||||||||  | |||| |||||||||||    
T  9549183 agagagataaagtaaaaa-ataatgtgagtatgagagagaaaattgtcacaaaagttgtcacaaaatggatgttcaaatatcattt 9549267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 16327156 - 16327221
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||| |||||||| |  ||||||||||| ||||| || | |||||||||||||||    
T  16327156 aatgtgagtatgagagagaaagttgtcgcaaaagttgtcgcaaaatagatatttaaatatcatttc 16327221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 16872160 - 16872225
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||| | |||||||| || |||||||||||||||||  | |||| ||||||||||||    
T  16872160 aatgtgagtatgatagagaaagttgttgcaaaagttgtcacaaaatggatgttcaaatatcatttc 16872225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 16966852 - 16966787
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||| |||||||| || ||||||||||||| |||  | |||| ||||||||||||    
T  16966852 aatgtgagtatgagagagaaagttgttgcaaaagttgtcactaaatggatgttcaaatatcatttc 16966787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 98
Target Start/End: Original strand, 18886898 - 18886967
Alignment:
Q  29 atacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||||||||| ||||||||||| || | | |||| |||| ||||||  |||||||||||| ||||||    
T  18886898 atacaatgtgaatctgagaaagaaaattgtcataaaaattgtaacaaaatggttgtttaaataccatttc 18886967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 98
Target Start/End: Original strand, 28772136 - 28772193
Alignment:
Q  41 tatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| |||||||||| |||||| |||||| ||||  |||||| ||||||||||||    
T  28772136 tatgagagagaaagttatcacaaaaattgtcaaaaaatggttgttcaaatatcatttc 28772193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 30136019 - 30136084
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||||||||||| |||||||| || ||||||||||||  ||| |  |||| ||||||||||||    
T  30136019 aatgtgaatatgagagagaaagttgttgcaaaagttgtcattaaataaatgttcaaatatcatttc 30136084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 34018875 - 34018810
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||| ||||| || || |||||||||||| ||||  |||||| ||||||||||||    
T  34018875 aatgtgagtatgagagagaaaattgttgcaaaagttgtcagaaaatggttgttcaaatatcatttc 34018810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 34490161 - 34490226
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||| ||| |||||||| || |||||||||||||||||  | | |||||||||||||||    
T  34490161 aatgtgagtataagagagaaagttgttgcaaaagttgtcacaaaattgatatttaaatatcatttc 34490226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 35153102 - 35153017
Alignment:
Q  13 gagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||||| |||| ||||||| |||| ||||||| | |||||| | |||||| |||| ||||||   ||||| ||||||||||||    
T  35153102 gagagagaaagtaagaatacaacgtgagtatgagataaaaagttgtaacaaaaattgttacaaaatgattgttcaaatatcatttc 35153017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 37942890 - 37942975
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcattt 97  Q
    |||||||||| ||||||||| ||||| ||||||| | | |||||| | |||||| |||||| |||| | ||||  |||||||||||    
T  37942890 agagagagaaagtaaaaatataatgtaaatatgaaagaaaaagttgtcacaaaaattgtcaaaaaataattgtacaaatatcattt 37942975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 38708280 - 38708365
Alignment:
Q  13 gagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||| || ||||||| | ||||||| ||| ||||||||| || |||||||| || |||| ||| || |||| ||||||||||||    
T  38708280 gagagataaagtaaaaaaataatgtgagtataagaaagaaaattgttacaaaaattatcaccaaatagatgttcaaatatcatttc 38708365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 4054272 - 4054355
Alignment:
Q  14 agagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||| ||||||| | ||||||||||||| | | |||||||| ||| ||||||| | ||||  |||||| ||||||||||||    
T  4054272 agagagaaagtaaaaagataatgtgaatatgaaagataaagttatcacagaagttgt-aaaaaatggttgttcaaatatcatttc 4054355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 10644807 - 10644871
Alignment:
Q  34 atgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||| ||||||| |||||||| | ||||||||||| ||||||  |||||  ||||||||||||    
T  10644807 atgtgattatgagagagaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcatttc 10644871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 12284255 - 12284339
Alignment:
Q  14 agagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||| ||||||| | ||| ||| ||||||| |||||||| | ||||| ||||||  ||||  |||||| ||||||||||||    
T  12284255 agagagaaagtaaaaacaaaatatgagtatgagagagaaagttgtcacaaacgttgtccaaaaatggttgttcaaatatcatttc 12284339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 27854752 - 27854835
Alignment:
Q  14 agagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||| ||||||| | ||||||| |||||||||| ||||||| |||||| || ||| |||   |||||| ||||||||||||    
T  27854752 agagagaaagtaaaaacataatgtgagtatgagaaag-aagttatcacaaaaattatcaaaaattcgttgttgaaatatcatttc 27854835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 29991478 - 29991414
Alignment:
Q  34 atgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||| ||||| | |||||||| | ||||||||||||||||||  | |||| ||||||||||||    
T  29991478 atgtgagtatgaaagagaaagttgtaacaaaagttgtcacaaaatggatgttcaaatatcatttc 29991414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 7e-16; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 24900861 - 24900777
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| ||||||||| |||||||||||||  ||||||||| | ||||||||||||| ||||  |||||| ||||||||||||    
T  24900861 agagagagaaagtaaaaatataatgtgaatatga--aagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttc 24900777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 17551362 - 17551448
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| || ||||||| | ||||||| ||||||| |||||||| ||||||||||||||| ||||  |||||| ||||||||||||    
T  17551362 agagagataaagtaaaaacataatgtgagtatgagagagaaagttgttacaaaagttgtcaaaaaatggttgttcaaatatcatttc 17551448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 35213565 - 35213630
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||| |||||||| |||||||||||||||||||| || |||| ||||||||||||    
T  35213565 aatgtgagtatgagagagaaagttgttacaaaagttgtcacaaaatagatgttcaaatatcatttc 35213630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 15318192 - 15318257
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||||||||||| |||||||| | ||||||||||||||||||  | |||| ||||||||||||    
T  15318192 aatgtgaatatgagagagaaagttgtaacaaaagttgtcacaaaatggatgttcaaatatcatttc 15318257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 27334923 - 27334860
Alignment:
Q  34 atgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||| |||||||| ||||||||| |||||||||||||||||| ||||||  ||||||||||||    
T  27334923 atgtgagtatgagaaggaaagttat-acaaaagttgtcacaaaatagttgtacaaatatcatttc 27334860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 27395663 - 27395600
Alignment:
Q  34 atgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||| |||||||| ||||||||| |||||||||||||||||| ||||||  ||||||||||||    
T  27395663 atgtgagtatgagaaggaaagttat-acaaaagttgtcacaaaatagttgtacaaatatcatttc 27395600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 98
Target Start/End: Original strand, 16368033 - 16368116
Alignment:
Q  15 gagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||||| ||||||| |||||||||||||||| |||||||| || | | ||||  |||||  ||||||||||||    
T  16368033 gagagaaagtaaaaatataatgtgagtatgagaaagaaagttgttacaaaaattattataaaatggttgtacaaatatcatttc 16368116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 8505757 - 8505843
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| || ||||||  | ||||||||||||||| |||||||| | ||||||||||||| ||||   ||||| ||||||||||||    
T  8505757 agagagaaaaagtaaaaggataatgtgaatatgagagagaaagttgtcacaaaagttgtcaaaaaatgattgttcaaatatcatttc 8505843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 8645396 - 8645311
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| ||||||  | ||||||| ||||||| |||||||| | ||||||||||||| ||||  |||||| ||||||||||||    
T  8645396 agagagagaaagtaaaaggataatgtgagtatgagagagaaagttgtcacaaaagttgtca-aaaagtgttgttcaaatatcatttc 8645311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 98
Target Start/End: Original strand, 11635538 - 11635604
Alignment:
Q  32 caatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||||||||| |||||||| | ||||||||||||| ||||   ||||| ||||||||||||    
T  11635538 caatgtgaatatgagagagaaagttgtcacaaaagttgtcaaaaaatgattgttcaaatatcatttc 11635604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 25127816 - 25127902
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| ||||||| | ||||||| ||| ||| |||||||| | ||||||||||| ||||||  |||||  ||||||||||||    
T  25127816 agagagagaaagtaaaaacataatgtgagtatcagagagaaagttttcacaaaagttgttacaaaatggttgtacaaatatcatttc 25127902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 25811822 - 25811907
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| ||||||| | ||||||| ||||||| |||||||| | ||||||||||| | ||||  |||||| ||||||||||||    
T  25811822 agagagagaaagtaaaaagataatgtgagtatgagagagaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatttc 25811907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 32459500 - 32459586
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| || |||||||   ||||||||||||||| |||||||| | ||||||||||||| ||||  | |||| ||||||||||||    
T  32459500 agagagataaagtaaaaaagtaatgtgaatatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttc 32459586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 98
Target Start/End: Original strand, 34442062 - 34442132
Alignment:
Q  28 aatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||||| ||||||| ||||| || | ||||||||||||| |||| ||||| | ||||||||||||    
T  34442062 aatacaatgtgagtatgagagagaaaattgtcacaaaagttgtcataaaatagttgctcaaatatcatttc 34442132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 3853291 - 3853375
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcattt 97  Q
    |||||||||| || |||| | || |||| ||||||| |||||||||| ||||||||||||| ||||   |||||||||||||||||    
T  3853291 agagagagaaagttaaaacataaggtgattatgagagagaaagttatcacaaaagttgtca-aaaatgtttgtttaaatatcattt 3853375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 16337909 - 16337962
Alignment:
Q  15 gagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagtt 68  Q
    ||||||| ||||||||| ||||||| ||||||| |||||||| |||||||||||    
T  16337909 gagagaaagtaaaaatataatgtgagtatgagagagaaagttgttacaaaagtt 16337962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 17181940 - 17182005
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||| |||||||| |||||||||||||   ||||  |||||||||||||||||||    
T  17181940 aatgtgagtatgagatagaaagttgttacaaaagttgttcaaaaatggttgtttaaatatcatttc 17182005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 30423599 - 30423664
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||||||||| | |||||||| ||||||||| ||||| |||| | ||||| ||||||||||||    
T  30423599 aatgtgaatatgatagagaaagttgttacaaaagctgtcaaaaaataattgttcaaatatcatttc 30423664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 30036799 - 30036863
Alignment:
Q  34 atgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||| ||||||| |||||||| || ||||||||||||| ||| || |||| ||||||||||||    
T  30036799 atgtgattatgagagagaaagttgttgcaaaagttgtcactaaatagatgttcaaatatcatttc 30036863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 98
Target Start/End: Complemental strand, 33712414 - 33712322
Alignment:
Q  6 agcagcagagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||| ||||||||||| ||| ||  ||||||||  ||||||| |||||||| | ||||||||||||| |||   |||||| ||||||||||||    
T  33712414 agcaacagagagagaaagtagaagaacaatgtgtgtatgagagagaaagttgtcacaaaagttgtcaaaaagtggttgttcaaatatcatttc 33712322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 12044408 - 12044334
Alignment:
Q  23 gtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||||| ||||||| ||||||| |||||||| |   ||||||||||| |||| |||||| |||||||||||||    
T  12044408 gtaaaaatataatgtgagtatgagagagaaagttgtct-aaaagttgtcaaaaaatagttgtataaatatcatttc 12044334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 35077200 - 35077125
Alignment:
Q  23 gtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||||| ||||| | | |||||| ||| ||||||||||| ||||  |||||| ||||||||||||    
T  35077200 gtaaaaacacaatgtgagtatgaaagataaagttgttataaaagttgtcaaaaaattgttgttcaaatatcatttc 35077125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 5327575 - 5327661
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| || ||||||| | ||| ||| ||||||| |||||||| ||| |||||||||||| |||  | |||| ||||||||||||    
T  5327575 agagagataaagtaaaaaaataatatgagtatgagagagaaagttgttataaaagttgtcactaaatggatgttcaaatatcatttc 5327661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 10335638 - 10335552
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| ||||||| | ||||||| ||||||| | |||||| | ||| |||| |||||||||  |||||  ||||||||||||    
T  10335638 agagagagaaagtaaaaaaataatgtgagtatgagagataaagttgtcacataagtcgtcacaaaatggttgtcaaaatatcatttc 10335552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 103
Target Start/End: Original strand, 20822872 - 20822942
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttcactaa 103  Q
    ||||||| ||||||| |||||||| | ||||||||||||| ||||  | |||| |||||||||||| ||||    
T  20822872 aatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctctaa 20822942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 22079547 - 22079632
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| ||||||| | ||||||| | ||||| |||||||| | ||||||||||| | ||||  |||||| ||||||||||||    
T  22079547 agagagagaaagtaaaaacataatgtgagtgtgagagagaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatttc 22079632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 26595436 - 26595351
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||||| ||||||| | ||||||| ||||||| | ||| || ||| ||||||| ||| |||| ||||||| ||||||||||||    
T  26595436 agagagagaaagtaaaaacataatgtgagtatgagagaaaaaattgttataaaagttatca-aaaatagttgttcaaatatcatttc 26595351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 34047474 - 34047389
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||| |||||| | ||||||| ||||||| |||||||| | ||||||||||| | ||||  |||||| ||||||||||||    
T  34047474 agagagataagataaaaagataatgtgagtatgagagagaaagttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatttc 34047389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 105
Target Start/End: Complemental strand, 552880 - 552788
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttcactaaaa 105  Q
    |||||||||| ||||||| | ||||||||||||||| | |||||| | ||| ||||||| | ||||   ||||| |||||||||||| ||||||    
T  552880 agagagagaaagtaaaaagataatgtgaatatgagagacaaagttgtcacataagttgt-aaaaaatgtttgttcaaatatcatttctctaaaa 552788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 18141305 - 18141370
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||| |||||||| | ||||||||||||| ||||    |||||||||||||||||    
T  18141305 aatgtgagtatgagagagaaagttgtcacaaaagttgtcataaaatgaatgtttaaatatcatttc 18141370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 33551700 - 33551647
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaa 65  Q
    ||||||||||  |||||||||||| ||| ||||| |||||||||| ||||||||    
T  33551700 agagagagaatataaaaatacaatttgagtatgaaaaagaaagttgttacaaaa 33551647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 3339505 - 3339568
Alignment:
Q  34 atgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||| ||||||| |||||||| | ||||||||||||||||||  |||||  ||||||||||||    
T  3339505 atgtgagtatgagagagaaagttgt-acaaaagttgtcacaaaatggttgtacaaatatcatttc 3339568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 14818017 - 14817934
Alignment:
Q  14 agagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||| ||||||| | || |||| ||||||| |||||||| | |||||| |||| | |||| ||||||| ||||||||||||    
T  14818017 agagagaaagtaaaaagaaaaagtgagtatgagagagaaagttgtcacaaaaattgtaa-aaaatagttgttcaaatatcatttc 14817934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 33421826 - 33421762
Alignment:
Q  34 atgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||| ||||| | |||||||| | ||||||||||||||||||  | |||| ||||||||||||    
T  33421826 atgtgagtatgaaagagaaagttgtaacaaaagttgtcacaaaatggatgttcaaatatcatttc 33421762  T

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Target: scaffold0160 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 26507 - 26423
Alignment:
Q  14 agagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||||  ||||| || ||||||| ||| ||||| ||| || | ||||||||| ||| ||||| |||||||||||||||||||    
T  26507 agagagaaattaaaagtataatgtgagtataagaaaaaaaattgtcacaaaagttatcataaaacggttgtttaaatatcatttc 26423  T

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Target: scaffold0003 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 337203 - 337120
Alignment:
Q  14 agagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||||  |||| |||| ||||||| ||||||| ||||||||||| |||||||||||| ||||  |||||  ||||||||||||    
T  337203 agagagagagtaagaatataatgtgagtatgagagagaaagttatt-caaaagttgtcagaaaatggttgtacaaatatcatttc 337120  T

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Target: scaffold0034 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 98
Target Start/End: Original strand, 101908 - 101975
Alignment:
Q  31 acaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||||| ||||||| |||||||| | ||||||||||||| ||||  |||||| | ||||||||||    
T  101908 acaatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcagatatcatttc 101975  T

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Target: scaffold0532 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 11051 - 10966
Alignment:
Q  12 agagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| || ||||||| | ||||||| ||||||| |||||||| | |||||||||||| |||||  | |||| ||||||||||||    
T  11051 agagagataaagtaaaaa-ataatgtgagtatgagagagaaagttgtcacaaaagttgtcccaaaatggatgttcaaatatcatttc 10966  T

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Target: scaffold0321 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 19703 - 19638
Alignment:
Q  33 aatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    ||||||| ||||||| |||||||| || ||||||||||||| |||  | |||| ||||||||||||    
T  19703 aatgtgagtatgagagagaaagttgttgcaaaagttgtcactaaatggatgttcaaatatcatttc 19638  T

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Target: scaffold0085 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 22849 - 22922
Alignment:
Q  24 taaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcattt 97  Q
    |||||| ||||||||| ||| ||||| |||||| | | ||||||||||||||||   ||||| |||||||||||    
T  22849 taaaaaaacaatgtgagtataagaaataaagttgtcataaaagttgtcacaaaatgattgttcaaatatcattt 22922  T

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Target: scaffold0178 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 3854 - 3918
Alignment:
Q  34 atgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcatttc 98  Q
    |||||| ||||| | ||||| |||| | |||||||||||| ||| |||| |||||||||||||||    
T  3854 atgtgagtatgaaagagaaaattatcataaaagttgtcactaaatagttttttaaatatcatttc 3918  T

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Target: scaffold0121 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 3919 - 3991
Alignment:
Q  25 aaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatcattt 97  Q
    ||||||||||||| ||||||||| ||||| ||||  ||||| || ||||||||   |||| ||||||||||||    
T  3919 aaaaatacaatgtaaatatgagagagaaaattatctcaaaaattatcacaaaatgattgtataaatatcattt 3991  T

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Target: scaffold0027 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 121722 - 121642
Alignment:
Q  13 gagagagaaggtaaaaatacaatgtgaatatgagaaagaaagttattacaaaagttgtcacaaaacagttgtttaaatatc 93  Q
    |||| |||| ||||||||| ||||||| ||||||| | ||| || ||||||||||||| | |||| | | |||||||||||    
T  121722 gagaaagaaagtaaaaatataatgtgagtatgagagaaaaaattgttacaaaagttgttaaaaaataatagtttaaatatc 121642  T

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