View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20803_high_63 (Length: 237)
Name: NF20803_high_63
Description: NF20803
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20803_high_63 |
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Alignment Details
Target: chr1 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 18 - 220
Target Start/End: Original strand, 40509493 - 40509695
Alignment:
| Q |
18 |
ctaaatgatagtcgaaaatagttgtgcggtcacaataaactacaattaaaatctttcaaagaaaaagttgttaatagctactgaagatcattgatcaact |
117 |
Q |
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| T |
40509493 |
ctaaatgatagtcgaaaatagttgtgcggtcaccataaactacaattaaaatctttcaaagaaaaagttgttaatagctactgaagatcattgatcaact |
40509592 |
T |
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| Q |
118 |
ttatacccgatccaaaatccacacatctcctcatgtatggaaaagttgtgccaatatcatccaagggtttttccttgcaatcatgtttaggaggtatatg |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40509593 |
ttatacccgatccaaaatccacacatctcctcatgtatggaaaagttgtgccaatatcatccaagggtttttccttgcaatcatgtttaggaggtatatg |
40509692 |
T |
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| Q |
218 |
aaa |
220 |
Q |
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| T |
40509693 |
aaa |
40509695 |
T |
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