View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20803_low_38 (Length: 304)
Name: NF20803_low_38
Description: NF20803
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20803_low_38 |
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Alignment Details
Target: chr6 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 39 - 286
Target Start/End: Complemental strand, 2757997 - 2757749
Alignment:
| Q |
39 |
aacggcgtcaaattttgcgccatttcttcaaccatcggaagttaggattgacgctggttacaaccagctctaaaaaccaaatttcctgccgctaattctc |
138 |
Q |
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| T |
2757997 |
aacggcgtcaaattttgcgccatttcttcaaccatcggaagttaggattgacgctggttacaaccagctctaaaaaccaaatttcctgccgctaattctc |
2757898 |
T |
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| Q |
139 |
gcgtttgttgtaaaaaa-tgttgaacttgaatgaagaatatccaatgctaaaatccatttagttatattccttaggcctaggcttgcacaatttttcttt |
237 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
2757897 |
tcgtttgttgtaaaaaaatgttgaacttgaatgaagaatatccaatgctaaaatccatatagttatattccttaggcctaggcttgcacaatttttcttt |
2757798 |
T |
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| Q |
238 |
tgctaaggaaagctggtgcataatgtactcaagaaagagtgatagtttt |
286 |
Q |
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| T |
2757797 |
tgctaaggaaagctggtgcataatgtactcaagaaagagtgatagtttt |
2757749 |
T |
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