View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20804_high_48 (Length: 201)
Name: NF20804_high_48
Description: NF20804
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20804_high_48 |
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Alignment Details
Target: chr7 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 26 - 185
Target Start/End: Original strand, 45042776 - 45042936
Alignment:
| Q |
26 |
aagaataaaatatacttaattacatgttcctttgcatacaagacaccgtcacattgatgtaagtaaaaataatttgagaac-nnnnnnnnnnggaagttt |
124 |
Q |
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| T |
45042776 |
aagaataaaatatacttaattacatgttcctttgcatacaagacaccgtcacattgatgtaagtaaaaataatttgagaacaaaaaaaaaaaggaagttt |
45042875 |
T |
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| Q |
125 |
tcaatgattgccttcagaatcgactaactgaaaaatcaattaccgacacaaacggtatatg |
185 |
Q |
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| T |
45042876 |
tcaatgattgccttcagaatcgactaactgaaaaatcaattaccgacacaaacggtatatg |
45042936 |
T |
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