View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20804_low_23 (Length: 284)

Name: NF20804_low_23
Description: NF20804
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20804_low_23
NF20804_low_23
[»] chr1 (7 HSPs)
chr1 (41-268)||(46738009-46738234)
chr1 (147-228)||(8028679-8028760)
chr1 (147-206)||(35632987-35633045)
chr1 (146-220)||(21966234-21966307)
chr1 (33-70)||(49948025-49948062)
chr1 (147-223)||(4968699-4968774)
chr1 (148-208)||(10448145-10448205)
[»] chr8 (12 HSPs)
chr8 (147-228)||(15920051-15920130)
chr8 (147-228)||(1657897-1657978)
chr8 (151-228)||(36801864-36801941)
chr8 (147-228)||(415166-415247)
chr8 (147-228)||(14031754-14031835)
chr8 (147-228)||(37402198-37402279)
chr8 (147-224)||(4205157-4205233)
chr8 (147-223)||(6335849-6335925)
chr8 (192-244)||(12826401-12826453)
chr8 (147-208)||(4438542-4438602)
chr8 (147-224)||(13206126-13206202)
chr8 (176-228)||(35173379-35173431)
[»] scaffold0035 (1 HSPs)
scaffold0035 (147-228)||(81814-81895)
[»] chr7 (12 HSPs)
chr7 (147-228)||(5096508-5096589)
chr7 (20-69)||(21018484-21018533)
chr7 (151-243)||(1292086-1292179)
chr7 (175-228)||(24389841-24389894)
chr7 (147-228)||(31309734-31309815)
chr7 (147-228)||(40358463-40358543)
chr7 (150-222)||(32358849-32358920)
chr7 (147-225)||(13703299-13703376)
chr7 (147-176)||(13640665-13640694)
chr7 (147-176)||(13703046-13703075)
chr7 (147-228)||(39753588-39753669)
chr7 (147-187)||(30248163-30248203)
[»] chr5 (9 HSPs)
chr5 (147-228)||(41879793-41879874)
chr5 (147-228)||(27263826-27263907)
chr5 (147-228)||(28394654-28394735)
chr5 (147-228)||(31172286-31172367)
chr5 (151-225)||(28040229-28040304)
chr5 (147-210)||(42522718-42522780)
chr5 (147-224)||(27598334-27598410)
chr5 (175-228)||(31202023-31202076)
chr5 (151-223)||(39850394-39850465)
[»] chr4 (13 HSPs)
chr4 (147-228)||(23315894-23315975)
chr4 (151-224)||(24670080-24670152)
chr4 (147-228)||(44689767-44689848)
chr4 (147-223)||(22160350-22160426)
chr4 (151-244)||(55109844-55109938)
chr4 (153-228)||(6028628-6028702)
chr4 (147-249)||(645989-646094)
chr4 (150-228)||(28715410-28715487)
chr4 (147-235)||(33389900-33389991)
chr4 (147-228)||(38490901-38490981)
chr4 (152-228)||(4815875-4815951)
chr4 (192-228)||(10981668-10981704)
chr4 (146-202)||(24535278-24535334)
[»] chr3 (9 HSPs)
chr3 (147-228)||(44177008-44177089)
chr3 (147-228)||(3806655-3806736)
chr3 (147-228)||(44183689-44183770)
chr3 (147-228)||(37681336-37681416)
chr3 (147-228)||(37980284-37980365)
chr3 (149-228)||(19578670-19578748)
chr3 (147-224)||(5846243-5846319)
chr3 (147-228)||(17583198-17583278)
chr3 (147-227)||(54114330-54114407)
[»] chr2 (5 HSPs)
chr2 (147-228)||(23914565-23914645)
chr2 (147-228)||(40324369-40324450)
chr2 (147-228)||(2383078-2383159)
chr2 (147-228)||(14690104-14690183)
chr2 (147-215)||(30675540-30675607)
[»] scaffold0003 (1 HSPs)
scaffold0003 (146-223)||(226394-226469)
[»] scaffold1017 (1 HSPs)
scaffold1017 (147-228)||(2043-2123)
[»] chr6 (4 HSPs)
chr6 (147-228)||(13846529-13846610)
chr6 (147-209)||(8866868-8866929)
chr6 (175-229)||(11573365-11573419)
chr6 (154-228)||(33803894-33803968)


Alignment Details
Target: chr1 (Bit Score: 187; Significance: 1e-101; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 41 - 268
Target Start/End: Original strand, 46738009 - 46738234
Alignment:
Q  41 aattttaatttaaataaatttggaaaactgnnnnnnnngtaacctggtagaatacaagtcgtgtgcacttgatgacaactgttgtcgtgctatcgagtat 140  Q
    ||||| ||||||||||||||||||||||||        ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46738009 aatttaaatttaaataaatttggaaaactgaaaaaa--gtaacttggtggaatacaagtcgtgtgcacttgatgacaactgttgtcgtgctatcgagtat 46738106  T
Q  141 tattggtaacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaagggtaattagaagtgaa 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46738107 tattggtaacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaagggtaattagaagtgaa 46738206  T
Q  241 aaagacaaccaaaaactatgtattcttt 268  Q
    ||||||||||||||||||||||||||||    
T  46738207 aaagacaaccaaaaactatgtattcttt 46738234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 147 - 228
Target Start/End: Original strand, 8028679 - 8028760
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaagggta 228  Q
    ||||||||||||||||||||||| ||| ||||||||| ||  |||||| |||||||  |||| | |||||||||||||||||    
T  8028679 taacaaatataatataaattcttttttttttttaataccaccaagaatgtaacattaatataggaaaatttgtttaagggta 8028760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 35633045 - 35632987
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaataagaatataacattctta 206  Q
    ||||||||||||||||||||||||| | ||||||||||||  || || ||||||||||||    
T  35633045 taacaaatataatataaattcttatat-tttttaataacaccaacaaaataacattctta 35632987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 220
Target Start/End: Complemental strand, 21966307 - 21966234
Alignment:
Q  146 gtaacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtt 220  Q
    |||||||||||||||||||||||||| | |||| ||| |||  || ||||| | |||||||||| ||||||||||    
T  21966307 gtaacaaatataatataaattcttatct-ttttgaatgacaccaaaaatatgatattcttataacgaaatttgtt 21966234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 70
Target Start/End: Original strand, 49948025 - 49948062
Alignment:
Q  33 tgaaattaaattttaatttaaataaatttggaaaactg 70  Q
    |||||||||||||||||| ||||||||||| |||||||    
T  49948025 tgaaattaaattttaattaaaataaatttgtaaaactg 49948062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 223
Target Start/End: Original strand, 4968699 - 4968774
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaa 223  Q
    |||||||||||| | |||||||||| | | || |||||||  || ||||||||||| ||||||| ||||||||||||    
T  4968699 taacaaatataacaaaaattcttatctatctt-aataacaccaacaatataacattattataagaaaatttgtttaa 4968774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 208
Target Start/End: Original strand, 10448145 - 10448205
Alignment:
Q  148 aacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttata 208  Q
    |||||||||| ||||||||||||| | ||||||||||||  || || ||| ||||||||||    
T  10448145 aacaaatatagtataaattcttatctttttttaataacatcaacaaaatatcattcttata 10448205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 15920130 - 15920051
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaagggta 228  Q
    |||||||||||||| |||||||||| |  |||||||||||  || ||||||||||| ||||||| |||||||||||||||||    
T  15920130 taacaaatataataaaaattcttatct--ttttaataacaccaacaatataacattattataagaaaatttgtttaagggta 15920051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 1657978 - 1657897
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaagggta 228  Q
    ||||||||||||||||||||||||| | ||||||||| ||  |||||| |||||||  |||| | |||||||||||||||||    
T  1657978 taacaaatataatataaattcttatctttttttaataccaccaagaatgtaacattaatataggaaaatttgtttaagggta 1657897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 151 - 228
Target Start/End: Complemental strand, 36801941 - 36801864
Alignment:
Q  151 aaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaagggta 228  Q
    ||||||||||||||||||||||| ||||||||| ||  |||||| |||||||  |||| | |||||||||||||||||    
T  36801941 aaatataatataaattcttatttttttttaataccaccaagaatgtaacattaatataggaaaatttgtttaagggta 36801864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 415247 - 415166
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaagggta 228  Q
    |||||||||||||| |||||||||| | ||||||||| ||  |||||| |||||||  |||| | |||||||||||||||||    
T  415247 taacaaatataatacaaattcttatctttttttaataccaccaagaatgtaacattaatataggaaaatttgtttaagggta 415166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 228
Target Start/End: Original strand, 14031754 - 14031835
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaagggta 228  Q
    ||||||||||||||| ||||||||| | ||||||||| ||  |||||| |||||||  |||| | |||||||||||||||||    
T  14031754 taacaaatataatatgaattcttatctttttttaataccaccaagaatgtaacattaatataggaaaatttgtttaagggta 14031835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 228
Target Start/End: Original strand, 37402198 - 37402279
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaagggta 228  Q
    |||||||||||||| |||||||||| | ||||||||| ||  |||||| |||||||  |||| | |||||||||||||||||    
T  37402198 taacaaatataatacaaattcttatctttttttaataccaccaagaatgtaacattaatataggaaaatttgtttaagggta 37402279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 224
Target Start/End: Original strand, 4205157 - 4205233
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaag 224  Q
    ||||||||||||||||||||| ||| | ||||||||| ||  || |||||||||||  |||||| |||||||||||||    
T  4205157 taacaaatataatataaattcctatct-tttttaatatcacgaacaatataacattaatataagaaaatttgtttaag 4205233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 223
Target Start/End: Complemental strand, 6335925 - 6335849
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaa 223  Q
    ||||||||||||||||||||||||| | ||||||||| ||  ||||||  ||||||  |||| | ||||||||||||    
T  6335925 taacaaatataatataaattcttatctttttttaataccaccaagaatggaacattaatataggaaaatttgtttaa 6335849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 12826401 - 12826453
Alignment:
Q  192 aatataacattcttataaggaaatttgtttaagggtaattagaagtgaaaaag 244  Q
    |||||||||||| |||||  |||||||||||||||||||| | ||||||||||    
T  12826401 aatataacattcatataaacaaatttgtttaagggtaattgggagtgaaaaag 12826453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 4438602 - 4438542
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttata 208  Q
    ||||||||||||||||||||||||| | |||||||| | |  || |||||||||||||||||    
T  4438602 taacaaatataatataaattcttatct-tttttaatgataccaacaatataacattcttata 4438542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 224
Target Start/End: Original strand, 13206126 - 13206202
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaag 224  Q
    ||||||||||| || |||||||||| | |||| | |||||  || ||||||||||||||| ||| |||||||||||||    
T  13206126 taacaaatatattaaaaattcttatct-ttttcattaacaccaacaatataacattcttaaaagcaaatttgtttaag 13206202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 35173379 - 35173431
Alignment:
Q  176 ttttaataacaataagaatataacattcttataaggaaatttgtttaagggta 228  Q
    |||||||||||  || ||||||||||||||||| | | |||||||||||||||    
T  35173379 ttttaataacatcaacaatataacattcttataggaacatttgtttaagggta 35173431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 81895 - 81814
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaagggta 228  Q
    ||||||||||||||||||||||||| | ||||||||| ||  |||||| |||||||  |||| | |||||||||||||||||    
T  81895 taacaaatataatataaattcttatctttttttaataccaccaagaatgtaacattaatataggaaaatttgtttaagggta 81814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 147 - 228
Target Start/End: Original strand, 5096508 - 5096589
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaagggta 228  Q
    ||||||||||||||||||||||||| | ||||||||| ||  |||||| |||||||  |||| | |||||||||||||||||    
T  5096508 taacaaatataatataaattcttatctttttttaataccaccaagaatgtaacattaatataggaaaatttgtttaagggta 5096589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 21018533 - 21018484
Alignment:
Q  20 cttaactttttgttgaaattaaattttaatttaaataaatttggaaaact 69  Q
    ||||||||||||||||| ||||||||||||| ||||||||||| ||||||    
T  21018533 cttaactttttgttgaagttaaattttaattaaaataaatttgtaaaact 21018484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 243
Target Start/End: Original strand, 1292086 - 1292179
Alignment:
Q  151 aaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaaggg--taattagaagtgaaaaa 243  Q
    ||||||||||||||||||||| | |||||||| |||  || |||||| |||||||||||| ||||||||| ||| |  ||||| |||||||||||    
T  1292086 aaatataatataaattcttatct-tttttaatgacaccaacaatatagcattcttataagtaaatttgttaaagagtataattggaagtgaaaaa 1292179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 24389894 - 24389841
Alignment:
Q  175 tttttaataacaataagaatataacattcttataaggaaatttgtttaagggta 228  Q
    |||||||||||| ||| ||||||||||| ||||||| ||||||||||| |||||    
T  24389894 tttttaataacattaacaatataacattgttataagaaaatttgtttatgggta 24389841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 31309815 - 31309734
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaagggta 228  Q
    ||||||||||||||||||  ||||| | ||||||||| ||  || |||||||||||  |||||  |||||||||||||||||    
T  31309815 taacaaatataatataaaaccttatctttttttaataccaccaacaatataacattaatataataaaatttgtttaagggta 31309734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 40358543 - 40358463
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaagggta 228  Q
    |||||||||| | | |||||||||| | ||||||||||||  || ||||||||||| ||||| | |||||||||||||||||    
T  40358543 taacaaatatgacaaaaattcttatct-tttttaataacatcaacaatataacattgttataggaaaatttgtttaagggta 40358463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 222
Target Start/End: Complemental strand, 32358920 - 32358849
Alignment:
Q  150 caaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgttta 222  Q
    |||||||||||||||||||||| | |||| ||| |||| || ||||||||||| ||||| | |||||||||||    
T  32358920 caaatataatataaattcttatct-ttttcaatgacaacaaaaatataacatttttatatgcaaatttgttta 32358849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 225
Target Start/End: Complemental strand, 13703376 - 13703299
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaagg 225  Q
    |||||||||||||| ||||| | || | |||||||||| | ||| ||||||| ||| ||||||| ||||||||||||||    
T  13703376 taacaaatataataaaaattatcatct-tttttaataaaactaacaatataagattattataagaaaatttgtttaagg 13703299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 176
Target Start/End: Complemental strand, 13640694 - 13640665
Alignment:
Q  147 taacaaatataatataaattcttatttgtt 176  Q
    ||||||||||||||||||||||||||||||    
T  13640694 taacaaatataatataaattcttatttgtt 13640665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 176
Target Start/End: Complemental strand, 13703075 - 13703046
Alignment:
Q  147 taacaaatataatataaattcttatttgtt 176  Q
    ||||||||||||||||||||||||||||||    
T  13703075 taacaaatataatataaattcttatttgtt 13703046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 228
Target Start/End: Original strand, 39753588 - 39753669
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaagggta 228  Q
    |||||| |||||||||||||||||| | ||||||||| ||  |||||| |||||||  ||||   |||||||||| ||||||    
T  39753588 taacaagtataatataaattcttatctttttttaataccaccaagaatgtaacattaatatagaaaaatttgtttgagggta 39753669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 187
Target Start/End: Complemental strand, 30248203 - 30248163
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaa 187  Q
    ||||||||||||||||||||||| | | |||||||||||||    
T  30248203 taacaaatataatataaattcttgtatttttttaataacaa 30248163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 147 - 228
Target Start/End: Original strand, 41879793 - 41879874
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaagggta 228  Q
    ||||||||||||||||||||||||| | ||||||||| ||  |||||| |||||||  |||| | |||||||||||||||||    
T  41879793 taacaaatataatataaattcttatctttttttaataccaccaagaatgtaacattaatataggaaaatttgtttaagggta 41879874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 228
Target Start/End: Original strand, 27263826 - 27263907
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaagggta 228  Q
    |||||||||||||| |||||||||| | ||||||||| ||  |||||| |||||||  |||| | |||||||||||||||||    
T  27263826 taacaaatataatacaaattcttatctttttttaataccaccaagaatgtaacattaatataggaaaatttgtttaagggta 27263907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 228
Target Start/End: Original strand, 28394654 - 28394735
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaagggta 228  Q
    |||||||||||||| |||||||||| | ||||||||| ||  |||||| |||||||  |||| | |||||||||||||||||    
T  28394654 taacaaatataatacaaattcttatctttttttaataccaccaagaatgtaacattaatataggaaaatttgtttaagggta 28394735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 228
Target Start/End: Original strand, 31172286 - 31172367
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaagggta 228  Q
    ||||||||||||||||||||||||| | ||||||||| ||  |||||| |||||||  ||||   |||||||||| ||||||    
T  31172286 taacaaatataatataaattcttatctttttttaataccaccaagaatgtaacattaatatagaaaaatttgtttgagggta 31172367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 225
Target Start/End: Complemental strand, 28040304 - 28040229
Alignment:
Q  151 aaatataatataaattcttatttgttttt-aataacaataagaatataacattcttataaggaaatttgtttaagg 225  Q
    |||||||||||||||| |||||| ||||| ||| ||   || |||||||||||||||| || ||||||||||||||    
T  28040304 aaatataatataaatttttatttatttttgaatgacgccaacaatataacattcttatgagaaaatttgtttaagg 28040229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 210
Target Start/End: Original strand, 42522718 - 42522780
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataag 210  Q
    |||||||||||||| |||||||||| | ||||||||||||  || ||||||||||| |||||||    
T  42522718 taacaaatataataaaaattcttatat-tttttaataacaccaacaatataacattattataag 42522780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 224
Target Start/End: Complemental strand, 27598410 - 27598334
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaag 224  Q
    ||||||||| |||| |||||||||| | |||||||||| |  || ||||||||| | ||||||| |||||||||||||    
T  27598410 taacaaataaaataaaaattcttatat-tttttaataataccaacaatataacactattataagaaaatttgtttaag 27598334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 31202076 - 31202023
Alignment:
Q  175 tttttaataacaataagaatataacattcttataaggaaatttgtttaagggta 228  Q
    ||||||||||||  ||  |||||||||| ||||||| |||||||||||||||||    
T  31202076 tttttaataacaccaacgatataacattgttataagaaaatttgtttaagggta 31202023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 39850465 - 39850394
Alignment:
Q  151 aaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaa 223  Q
    |||||||||||||||||||||   |||||||||||  ||| ||||||||||| |||||   ||||||||||||    
T  39850465 aaatataatataaattcttatca-tttttaataactttaacaatataacattattatagacaaatttgtttaa 39850394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 23315975 - 23315894
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaagggta 228  Q
    ||||||||||||||||||||||||| | ||||||||| ||  |||||| |||||||  |||| | |||||||||||||||||    
T  23315975 taacaaatataatataaattcttatctttttttaataccaccaagaatgtaacattaatataggaaaatttgtttaagggta 23315894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 24670152 - 24670080
Alignment:
Q  151 aaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaag 224  Q
    ||||||||||||||||||||| | |||| |||||||  || |||||||||||||||||   |||||||||||||    
T  24670152 aaatataatataaattcttatct-ttttaaataacataaaaaatataacattcttatagacaaatttgtttaag 24670080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 44689848 - 44689767
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaagggta 228  Q
    |||||||||||||||||||| |||||| |||  ||| | |  || ||||||||||||||| ||  |||||||||||||||||    
T  44689848 taacaaatataatataaattattatttttttcaaatgatatcaataatataacattcttacaaacaaatttgtttaagggta 44689767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 223
Target Start/End: Complemental strand, 22160426 - 22160350
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaa 223  Q
    ||||||||||||||||||||||||| | ||||||||| ||  || ||| |||||||  |||| | ||||||||||||    
T  22160426 taacaaatataatataaattcttatctttttttaataccaccaaaaatgtaacattaatataggaaaatttgtttaa 22160350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 244
Target Start/End: Complemental strand, 55109938 - 55109844
Alignment:
Q  151 aaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaaggg--taattagaagtgaaaaag 244  Q
    |||||||||||||||||||| || |||||| |||||  || || |||||||||||||||  |||||| |||||| |  |||||| |||||||||||    
T  55109938 aaatataatataaattctta-ttatttttagtaacaccaacaaaataacattcttataatcaaatttatttaagagtataattaaaagtgaaaaag 55109844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 228
Target Start/End: Original strand, 6028628 - 6028702
Alignment:
Q  153 atataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaagggta 228  Q
    ||||||||||||||||||| | |||||||| |||  || |||||| ||||||| || | |||||||||||||||||    
T  6028628 atataatataaattcttatct-tttttaatgacaccaaaaatatagcattcttgtatgaaaatttgtttaagggta 6028702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 249
Target Start/End: Original strand, 645989 - 646094
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaagg--gtaattagaa-gtgaaaaa 243  Q
    ||||||||||| ||||||||||| ||| |||| ||| |||  || || |||| ||| |||| | |||||||||||||||  |||||||||| | ||||||    
T  645989 taacaaatatattataaattctttttttttttaaatgacacgaacaaaataatatttttatgatgaaatttgtttaagggtgtaattagaaggagaaaaa 646088  T
Q  244 gacaac 249  Q
    ||||||    
T  646089 gacaac 646094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 228
Target Start/End: Original strand, 28715410 - 28715487
Alignment:
Q  150 caaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaagggta 228  Q
    ||||| |||||||||||||||| |||||  || | ||  || ||||||||||| ||||||| |||||||||||||||||    
T  28715410 caaatgtaatataaattcttatctgtttgaaaga-caccaataatataacatttttataagcaaatttgtttaagggta 28715487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 235
Target Start/End: Original strand, 33389900 - 33389991
Alignment:
Q  147 taacaaatataatataaattcttatttgttt---ttaataacaataagaatataacattcttataaggaaatttgtttaagggtaattagaa 235  Q
    ||||||||||||||||||||||||| | |||   |||||||||  || || |||| ||| ||||||  |||||||||||||| || ||||||    
T  33389900 taacaaatataatataaattcttatctttttgaattaataacaccaacaaaataatatttttataatcaaatttgtttaaggatatttagaa 33389991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 228
Target Start/End: Original strand, 38490901 - 38490981
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaagggta 228  Q
    |||||||||||||| |||||||||| | |||||||||||| ||| || | |||| | ||||||  |||||||||||| ||||    
T  38490901 taacaaatataatacaaattcttatct-tttttaataacattaataaaacaacagttttataatcaaatttgtttaaaggta 38490981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 228
Target Start/End: Complemental strand, 4815951 - 4815875
Alignment:
Q  152 aatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaagggta 228  Q
    ||||||| | ||||||||| |  ||||||||||||  || ||||||||||| ||||| | ||||||| |||||||||    
T  4815951 aatataacaaaaattcttaatcttttttaataacaccaacaatataacattattatacgaaaatttgcttaagggta 4815875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 228
Target Start/End: Original strand, 10981668 - 10981704
Alignment:
Q  192 aatataacattcttataaggaaatttgtttaagggta 228  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  10981668 aatataacattattataagaaaatttgtttaagggta 10981704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 202
Target Start/End: Complemental strand, 24535334 - 24535278
Alignment:
Q  146 gtaacaaatataatataaattcttatttgtttttaataacaataagaatataacatt 202  Q
    |||| |||||||||| ||||||| |||| ||||||||||||  || |||||||||||    
T  24535334 gtaataaatataataaaaattctaatttttttttaataacaccaacaatataacatt 24535278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 147 - 228
Target Start/End: Original strand, 44177008 - 44177089
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaagggta 228  Q
    ||||||||||||||||||||||||| | ||||||||| ||  |||||| |||||||  |||| | |||||||||||||||||    
T  44177008 taacaaatataatataaattcttatctttttttaataccaccaagaatgtaacattaatataggaaaatttgtttaagggta 44177089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 3806736 - 3806655
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaagggta 228  Q
    |||||||||||||| |||||||||| | ||||||||| ||  |||||| |||||||  |||| | |||||||||||||||||    
T  3806736 taacaaatataataaaaattcttatctttttttaataccaccaagaatgtaacattaatataggaaaatttgtttaagggta 3806655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 228
Target Start/End: Original strand, 44183689 - 44183770
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaagggta 228  Q
    |||||||||||||| |||||||||| | ||||||||| ||  |||||| |||||||  |||| | |||||||||||||||||    
T  44183689 taacaaatataatacaaattcttatctttttttaataccaccaagaatgtaacattaatataggaaaatttgtttaagggta 44183770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 37681416 - 37681336
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaagggta 228  Q
    ||||||||||||||||||| ||||| | ||||||||| ||  || |||||||||||  |||| | |||||||||||||||||    
T  37681416 taacaaatataatataaatccttatct-tttttaataccaccaacaatataacattaatataggaaaatttgtttaagggta 37681336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 37980365 - 37980284
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaagggta 228  Q
    |||||||||||||| |||||||||| | ||||||||| ||  |||||| |||||||  |||| | ||||||||| |||||||    
T  37980365 taacaaatataatacaaattcttatctttttttaataccaccaagaatgtaacattaatataggaaaatttgttgaagggta 37980284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 228
Target Start/End: Complemental strand, 19578748 - 19578670
Alignment:
Q  149 acaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaagggta 228  Q
    |||||||||||| ||| |||||| | ||||||||||||  || ||||||||||| ||||  | |||||||||||||||||    
T  19578748 acaaatataataaaaactcttatat-tttttaataacaccaacaatataacattattattggaaaatttgtttaagggta 19578670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 224
Target Start/End: Complemental strand, 5846319 - 5846243
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaag 224  Q
    |||||||||||||||||||  |||| | ||||||||| || ||| |||||||||||  ||||||  ||||||||||||    
T  5846319 taacaaatataatataaatctttatct-tttttaataccactaacaatataacattaatataagataatttgtttaag 5846243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 17583278 - 17583198
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaagggta 228  Q
    |||||||||||||| |||||||||| | ||||||||||||  || |||||||||||  |||| | |||| || |||||||||    
T  17583278 taacaaatataataaaaattcttatct-tttttaataacaccaacaatataacattactataggaaaatatgattaagggta 17583198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 227
Target Start/End: Complemental strand, 54114407 - 54114330
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaagggt 227  Q
    ||||||||||||||||||||||||||  ||||||||||| | |  |||||||||||| |||| | |||||||  |||||||    
T  54114407 taacaaatataatataaattcttatt--tttttaataac-acactaatataacattcatataggcaaatttgcataagggt 54114330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 23914645 - 23914565
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaagggta 228  Q
    ||||||||||||||||||||||||| | |||| |||||||  || |||||||||||||||||   |||||||||||||||||    
T  23914645 taacaaatataatataaattcttatct-ttttcaataacacaaacaatataacattcttatagccaaatttgtttaagggta 23914565  T

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Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 147 - 228
Target Start/End: Original strand, 40324369 - 40324450
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaagggta 228  Q
    |||||||||||||| |||||||||| | ||||||||| ||  |||||| |||||||  |||| |||||||||||||||||||    
T  40324369 taacaaatataatacaaattcttatatttttttaataccaccaagaatgtaacattaatatagggaaatttgtttaagggta 40324450  T

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Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 2383159 - 2383078
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaagggta 228  Q
    |||||||||||||| |||||||||| | ||||||||| ||  |||||| |||||||  |||| | |||||| ||||||||||    
T  2383159 taacaaatataatacaaattcttatctttttttaataccaccaagaatgtaacattaatataggaaaatttatttaagggta 2383078  T

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Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 228
Target Start/End: Original strand, 14690104 - 14690183
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaagggta 228  Q
    |||||||||||||| ||| |||| |||  |||||||||||  || ||||||||||| ||||| | |||| ||||||||||||    
T  14690104 taacaaatataataaaaaatctttttt--ttttaataacaccaacaatataacattattataggaaaatatgtttaagggta 14690183  T

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Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 30675540 - 30675607
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaat 215  Q
    |||||||||||||||||| |||||| | ||||||||||||  || |||||||||||  |||||| ||||    
T  30675540 taacaaatataatataaactcttatat-tttttaataacaccaacaatataacattaatataagaaaat 30675607  T

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Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 223
Target Start/End: Original strand, 226394 - 226469
Alignment:
Q  146 gtaacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaa 223  Q
    ||||||||||||||| |||||||||||| ||||||||||||  || |||||||||||  |||||| ||||||||||||    
T  226394 gtaacaaatataataaaaattcttattt-tttttaataacacgaacaatataacatt-atataagaaaatttgtttaa 226469  T

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Target: scaffold1017 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1017
Description:

Target: scaffold1017; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 228
Target Start/End: Original strand, 2043 - 2123
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaagggta 228  Q
    |||||||||||||| |||||||||| | ||||||||||||  || ||||||||||| |||||   |||| ||||||||||||    
T  2043 taacaaatataataaaaattcttatct-tttttaataacacaaacaatataacattattatagaaaaatatgtttaagggta 2123  T

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Target: chr6 (Bit Score: 34; Significance: 0.0000000004; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 13846610 - 13846529
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaagggta 228  Q
    |||||||||||||| |||||||||| | ||||||||| ||  |||||| |||||||  |||| | |||||||||||| ||||    
T  13846610 taacaaatataatacaaattcttatctttttttaataccaccaagaatgtaacattaatataggaaaatttgtttaatggta 13846529  T

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Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 209
Target Start/End: Original strand, 8866868 - 8866929
Alignment:
Q  147 taacaaatataatataaattcttatttgtttttaataacaataagaatataacattcttataa 209  Q
    ||||||||||||||||||||||||| | |||||||| |||  || |||| |||||||||||||    
T  8866868 taacaaatataatataaattcttatct-tttttaatgacaccaacaataaaacattcttataa 8866929  T

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Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 229
Target Start/End: Complemental strand, 11573419 - 11573365
Alignment:
Q  175 tttttaataacaataagaatataacattcttataaggaaatttgtttaagggtaa 229  Q
    ||||||||||||  |||||||||||||| |||||   ||||||||||||||||||    
T  11573419 tttttaataacaccaagaatataacatttttatagaaaaatttgtttaagggtaa 11573365  T

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Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 228
Target Start/End: Original strand, 33803894 - 33803968
Alignment:
Q  154 tataatataaattcttatttgtttttaataacaataagaatataacattcttataaggaaatttgtttaagggta 228  Q
    |||||||||||||||||| | |||||||| |||  || |||||| |||||||||| | | ||||| |||||||||    
T  33803894 tataatataaattcttatctttttttaatgacaccaacaatatagcattcttatatgcatatttgattaagggta 33803968  T

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