View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20805_low_2 (Length: 208)
Name: NF20805_low_2
Description: NF20805
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20805_low_2 |
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Alignment Details
Target: chr2 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 20 - 194
Target Start/End: Complemental strand, 36105812 - 36105639
Alignment:
| Q |
20 |
attagcaaccgtcgctttcatgtctttcattccgtcagttatgaaagttatgataacggtttctactcctagatttccaccgtaggatcttctgcacatt |
119 |
Q |
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| T |
36105812 |
attagtaaccgtcgctttcatgtctttcattccgtcagttatgaaagttatgataacggtttctactcctagatttccaccgtaggatcttctgcacatt |
36105713 |
T |
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| Q |
120 |
cccacacccgatctcctcctccctcttagtttctattttcactctcacacactcaccccaaccatcaaagaataa |
194 |
Q |
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| T |
36105712 |
cccgcacccgatcccctcctccctcttagtttctattttcactctcacacactca-cccaaccatcaaagaataa |
36105639 |
T |
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