View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20807_high_19 (Length: 262)
Name: NF20807_high_19
Description: NF20807
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20807_high_19 |
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Alignment Details
Target: chr2 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 8 - 248
Target Start/End: Complemental strand, 42902280 - 42902043
Alignment:
| Q |
8 |
gaaatgaaacaacaagtctaaaccaaggtcaagctaaacatgcataccattgtgaagaatcctctctatcataaagaatccaatgnnnnnnnnnnnnnnn |
107 |
Q |
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| T |
42902280 |
gaaatcaaacaacaagtctaaaccaaggtcaagctaaacatgcataccattgtgaagaatcctctctatcataaagaatccaatgtttttttttttt--- |
42902184 |
T |
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| Q |
108 |
atataccagacatatccttaacaaactttatgttcaccccacatgcatatatacatttccataattaatcaaactcttgtacaaattctgattaacgact |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42902183 |
atataccagacatatccttaacaaactttatgttcacctcacatgcatatatacatttccataattaatcaaactcttgtacaaattctgattaacgact |
42902084 |
T |
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| Q |
208 |
ttgcttccatgtcaatgattgcggccatgttttgttctttg |
248 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
42902083 |
ttgcttccatgtcaatgattgcggccatgttttgttctttg |
42902043 |
T |
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