View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20807_low_17 (Length: 279)
Name: NF20807_low_17
Description: NF20807
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20807_low_17 |
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Alignment Details
Target: chr7 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 23 - 270
Target Start/End: Original strand, 27600318 - 27600568
Alignment:
| Q |
23 |
aatttatatgttcgttttgaattgccttgatgatagtgaaggatgcgaagaacaaatatttaatatatcgtagtagaaaagaaaatttaaatgaaaacat |
122 |
Q |
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| T |
27600318 |
aatttatatgttcgttttgaattgccttaatgatagtgaaggatgcgaagaacaaatatttaatatatcgtaggagaaaagaaaaattaaatgaaaacat |
27600417 |
T |
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| Q |
123 |
aaacactataagccattccaagtctagtaattgtgagatacaccgagatttcaaccaaagtgtgatataaagtgggatccggtagatgaaca---tcaaa |
219 |
Q |
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| T |
27600418 |
aaacactataagccattccaggtctagtaattgtgagatataccgagatttcaaccaaagtgtgatctaaagtgggatctggtaggtgaacatcgtcaaa |
27600517 |
T |
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| Q |
220 |
tgaacatatttcacattcaactcaataggactatctaccattctagtataa |
270 |
Q |
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| T |
27600518 |
tgaacatatttcacattcaactcaataggactatctaccattctagtataa |
27600568 |
T |
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