View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20807_low_23 (Length: 250)
Name: NF20807_low_23
Description: NF20807
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20807_low_23 |
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Alignment Details
Target: chr3 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 46759993 - 46759750
Alignment:
| Q |
1 |
cctcgtaagaaatactatcgtctttatctatatactcaggggttaatgatccctcatatcgatcattcattctgttttcgtcaaggtcactaaaaaggaa |
100 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46759993 |
cctcgtaagaaatactatcgtctttgtctatatactcaggggttaatgatccctcatatcgatcattcattctgttttcgtcaaggtcactaaaaaggaa |
46759894 |
T |
|
| Q |
101 |
attctcttcatctgaacttgaggacggcgatctccttgatgtttcaccaggtaaacaatctccaagagagtattgtgtagttgataacgtgctagagaca |
200 |
Q |
| |
|
||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46759893 |
attctcttcatctgaacttgagggcggcaatctccttgatgtttcaccaggtaaacaatctccaagagagtattgtgtagttgataacgtgctagagaca |
46759794 |
T |
|
| Q |
201 |
tctttatctttcgtgttattctcacataatcctcggtcatcctc |
244 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
46759793 |
tctttatctttcgtgttattctcacataatccttggtcatcctc |
46759750 |
T |
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