View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20808_high_37 (Length: 267)
Name: NF20808_high_37
Description: NF20808
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20808_high_37 |
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Alignment Details
Target: chr2 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 18 - 257
Target Start/End: Complemental strand, 40818930 - 40818691
Alignment:
| Q |
18 |
ttggattatgatcttgagtatattaagcaattaattagtagtaatagtggtagttgtaataatggttacttgagtattgatgaaaacaagatggaggaga |
117 |
Q |
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| T |
40818930 |
ttggattatgatcttgagtatattaagcaattaattagtagtaatagtggtagttgtaataatggttacttgagtattgatgaaaataagatggaggaga |
40818831 |
T |
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| Q |
118 |
agactatgtagtattactgaactgatgagtggaagtgaaatcagaaagatatgtttcggtgagagaggtatggtgtatggtagtgtggaagactcagaaa |
217 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
40818830 |
agactatgtactattactgaactgatgagtggaagtgaaatcagaaagatatgtttcagtgagagaggtatggtgtatggtagtgtggaagactcagaaa |
40818731 |
T |
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| Q |
218 |
agacaatttaagctaattattatttttatgggattctgtg |
257 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
40818730 |
agacaatttaagctaattattatttttatgggattctgtg |
40818691 |
T |
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