View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20808_high_50 (Length: 237)
Name: NF20808_high_50
Description: NF20808
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20808_high_50 |
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Alignment Details
Target: chr4 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 21085903 - 21085683
Alignment:
| Q |
1 |
tcctctgtttagtattcactactacaatgccattatcatcacaatccttcaatttcttccatatggttcctatcttcacttttgttgtactttcactcac |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21085903 |
tcctctgtttagtattcactactacaatgccattatcatcacaatcctttaatttcttccatatggttcctatcttcacttttgttgtactttcactcac |
21085804 |
T |
|
| Q |
101 |
aatatttggttctaatgctcagggtccaccttcacctggctactatcctagttccaaaattagtcctatatcctttagtcaaggctttagaaacctttgg |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21085803 |
aatatttggttctaatgctcagggtccaccttcacctggctactatcctagttccaaaattagtcctatatcctttagtcaaggctttagaaacctttgg |
21085704 |
T |
|
| Q |
201 |
ggacctcaacatcaaagattg |
221 |
Q |
| |
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||||||||||||||||||||| |
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| T |
21085703 |
ggacctcaacatcaaagattg |
21085683 |
T |
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