View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20808_high_56 (Length: 225)
Name: NF20808_high_56
Description: NF20808
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20808_high_56 |
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Alignment Details
Target: chr7 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 243591 - 243802
Alignment:
| Q |
1 |
atatataatattatataacctatggttctttatttaaagcagtgtaccaaagtggcggaaatttccagcccaggctaggagaagaaattaataactctat |
100 |
Q |
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| T |
243591 |
atatataatattatataacctatggttctttatttaaagcagtgtaccaaagtggcggaaatttccagcccaagctaggagaagaaattaataactctat |
243690 |
T |
|
| Q |
101 |
gttagcttcttcttcttctttccttaaattgaattgatcattaaaattaggaattactatcatattcatgctcttctgaaccttctcatcgatcctcaac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
243691 |
gttagcttcttcttcttctttccttaaattgaattgatcattaaaattaggaattactatcatattcatgctcttctgaaccttctcatcgatcctcaac |
243790 |
T |
|
| Q |
201 |
tcctcatgttgt |
212 |
Q |
| |
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|||||||||||| |
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| T |
243791 |
tcctcatgttgt |
243802 |
T |
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