View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20808_low_29 (Length: 301)
Name: NF20808_low_29
Description: NF20808
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20808_low_29 |
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Alignment Details
Target: chr8 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 11 - 291
Target Start/End: Original strand, 42867449 - 42867729
Alignment:
| Q |
11 |
gtagttcttctgtgatcatgtccctctagaagtggacacgtgtggaaatgctatgcatacatattctttttcactctagaagtggacagaaattttgttt |
110 |
Q |
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| T |
42867449 |
gtagttcttctgtgatcatgtccctctagaagtggacacgtgtggaaatgctatgcatacatattctttttcactctagaagtggacagaaattttgttt |
42867548 |
T |
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| Q |
111 |
tatctttttctgaatttaatggttatttcttgacccaattttgttgctgcctttctttgttttttgatgcacagcggtatcatgcttacttcatggagga |
210 |
Q |
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| T |
42867549 |
tatctttttctgaatttaatggttatttcttgacccaattttgttgctgcctttctttgttttttgatgcacagcggtatcatgcttacttcatggagga |
42867648 |
T |
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| Q |
211 |
gatcgactcatggatgattatatctgcaggttcacttctctttttattgaggatcttgtacatatgtttcagcttcctatg |
291 |
Q |
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| T |
42867649 |
gatcgactcatggatgattatatctgcaggttcacttctctttttattgaggatcttgtacatatgtttcagcttcctatg |
42867729 |
T |
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